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Genes within 1Mb (chr12:99717500:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -481622 sc-eQTL 8.70e-01 0.0128 0.078 0.5 B L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 9.68e-02 -0.11 0.0657 0.5 B L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 2.73e-01 -0.0723 0.0657 0.5 B L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 7.56e-01 -0.0188 0.0604 0.5 CD4T L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 7.12e-01 -0.0208 0.0563 0.5 CD4T L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 6.41e-01 -0.0225 0.0481 0.5 CD4T L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 1.51e-01 -0.0956 0.0663 0.5 CD8T L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 2.17e-02 0.151 0.0652 0.5 CD8T L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 3.12e-01 -0.0625 0.0617 0.5 CD8T L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.86e-01 0.0471 0.0864 0.495 DC L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 2.51e-01 0.0958 0.0832 0.495 DC L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 6.89e-01 -0.0371 0.0924 0.495 DC L1
ENSG00000139354 GAS2L3 -856183 sc-eQTL 8.04e-01 0.0213 0.0859 0.495 DC L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.58e-01 0.0444 0.0757 0.5 Mono L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 3.84e-02 0.128 0.0617 0.5 Mono L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 7.81e-01 0.0181 0.0649 0.5 Mono L1
ENSG00000139354 GAS2L3 -856183 sc-eQTL 3.75e-01 -0.0539 0.0606 0.5 Mono L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 3.98e-01 -0.0593 0.07 0.502 NK L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.56e-01 -0.082 0.0576 0.502 NK L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 8.28e-02 -0.103 0.0591 0.502 NK L1
ENSG00000075089 ACTR6 -481622 sc-eQTL 2.85e-01 -0.089 0.0831 0.5 Other_T L1
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 4.20e-01 -0.0638 0.079 0.5 Other_T L1
ENSG00000136021 SCYL2 -549640 sc-eQTL 5.02e-01 -0.0489 0.0728 0.5 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -481622 sc-eQTL 4.28e-02 -0.206 0.101 0.482 B_Activated L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 6.43e-01 0.0506 0.109 0.482 B_Activated L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 9.37e-02 0.171 0.102 0.482 B_Activated L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.13e-01 -0.0585 0.0892 0.5 B_Intermediate L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 9.22e-01 -0.00935 0.0952 0.5 B_Intermediate L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 6.75e-01 -0.0327 0.078 0.5 B_Intermediate L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 7.26e-01 -0.033 0.0943 0.496 B_Memory L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 8.33e-01 0.0192 0.0909 0.496 B_Memory L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 5.26e-01 0.0524 0.0824 0.496 B_Memory L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 6.38e-01 0.0392 0.0832 0.5 B_Naive1 L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 9.80e-02 -0.132 0.0792 0.5 B_Naive1 L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 2.53e-02 -0.168 0.0745 0.5 B_Naive1 L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 6.02e-01 0.049 0.0938 0.498 B_Naive2 L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 6.54e-01 -0.0403 0.0899 0.498 B_Naive2 L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 9.49e-01 -0.00565 0.0879 0.498 B_Naive2 L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.66e-01 0.053 0.0923 0.498 CD4_CTL L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 7.32e-01 0.0314 0.0915 0.498 CD4_CTL L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 1.78e-01 0.122 0.0899 0.498 CD4_CTL L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 2.52e-01 0.0786 0.0685 0.5 CD4_Naive L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 5.86e-01 -0.0353 0.0648 0.5 CD4_Naive L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 7.06e-01 -0.0217 0.0575 0.5 CD4_Naive L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 2.26e-02 -0.166 0.0721 0.5 CD4_TCM L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 6.64e-01 0.0334 0.0768 0.5 CD4_TCM L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 8.58e-01 -0.0117 0.0652 0.5 CD4_TCM L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 4.00e-01 0.0714 0.0847 0.5 CD4_TEM L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 4.52e-01 0.0633 0.0839 0.5 CD4_TEM L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 3.94e-01 -0.0728 0.0852 0.5 CD4_TEM L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.39e-01 -0.047 0.0765 0.5 CD8_CTL L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 3.94e-02 0.161 0.0776 0.5 CD8_CTL L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.49e-01 -0.0585 0.0772 0.5 CD8_CTL L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 9.35e-01 -0.00616 0.0757 0.5 CD8_Naive L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 8.40e-01 0.0164 0.0812 0.5 CD8_Naive L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 6.13e-01 0.0365 0.0722 0.5 CD8_Naive L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 8.14e-01 -0.0208 0.0883 0.491 CD8_TCM L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.65e-01 0.131 0.0939 0.491 CD8_TCM L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 8.14e-01 -0.022 0.0936 0.491 CD8_TCM L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 6.12e-01 -0.0463 0.0913 0.507 CD8_TEM L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 2.54e-01 0.112 0.0977 0.507 CD8_TEM L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 2.56e-01 -0.114 0.0997 0.507 CD8_TEM L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 9.85e-01 -0.00174 0.0933 0.5 MAIT L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 9.52e-01 0.00517 0.0864 0.5 MAIT L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 3.32e-01 0.0787 0.0809 0.5 MAIT L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 6.67e-01 0.0395 0.0916 0.5 NK_CD56bright L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 3.39e-01 -0.0839 0.0876 0.5 NK_CD56bright L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 7.80e-01 0.0247 0.0883 0.5 NK_CD56bright L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 7.03e-01 -0.0315 0.0826 0.504 NK_CD56dim L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 3.84e-01 -0.0614 0.0705 0.504 NK_CD56dim L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 2.09e-01 -0.0935 0.0743 0.504 NK_CD56dim L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 2.54e-01 -0.109 0.0952 0.5 NK_HLA L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 8.98e-01 0.0123 0.0963 0.5 NK_HLA L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 1.30e-01 0.149 0.0979 0.5 NK_HLA L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.04e-01 -0.055 0.0821 0.504 NK_cytokine L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 8.90e-02 -0.13 0.076 0.504 NK_cytokine L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 1.28e-01 -0.11 0.0716 0.504 NK_cytokine L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 9.08e-01 0.0138 0.119 0.485 PB L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 6.38e-02 0.211 0.113 0.485 PB L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 2.23e-01 -0.148 0.121 0.485 PB L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 6.53e-01 0.0421 0.0936 0.502 Pro_T L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 9.86e-01 -0.0016 0.0934 0.502 Pro_T L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.64e-01 -0.0668 0.0911 0.502 Pro_T L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 9.20e-01 0.0089 0.0883 0.5 Treg L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.99e-01 -0.116 0.09 0.5 Treg L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 8.30e-01 -0.0184 0.0855 0.5 Treg L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 4.21e-01 0.0719 0.0891 0.5 cDC L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.40e-01 0.138 0.0932 0.5 cDC L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 5.43e-01 -0.0545 0.0894 0.5 cDC L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 6.98e-01 0.0344 0.0883 0.5 cDC L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 4.66e-01 0.0567 0.0776 0.5 cMono_IL1B L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 6.24e-02 0.116 0.0619 0.5 cMono_IL1B L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.41e-01 -0.0583 0.0756 0.5 cMono_IL1B L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 5.33e-01 -0.0411 0.0659 0.5 cMono_IL1B L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 3.31e-01 -0.0847 0.087 0.5 cMono_S100A L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 2.88e-01 0.087 0.0817 0.5 cMono_S100A L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.72e-01 0.0597 0.0828 0.5 cMono_S100A L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 6.38e-01 -0.0387 0.082 0.5 cMono_S100A L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 3.07e-01 -0.115 0.112 0.491 gdT L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 7.63e-01 -0.0341 0.113 0.491 gdT L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 7.16e-03 -0.303 0.111 0.491 gdT L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 9.38e-01 -0.00728 0.0938 0.491 intMono L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 2.79e-01 0.103 0.0952 0.491 intMono L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 9.83e-01 0.00204 0.0952 0.491 intMono L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 9.77e-01 -0.0025 0.0879 0.491 intMono L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 2.93e-01 0.0935 0.0887 0.502 ncMono L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.27e-01 0.134 0.0877 0.502 ncMono L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.04e-02 0.186 0.0903 0.502 ncMono L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 2.56e-01 -0.0883 0.0775 0.502 ncMono L2
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.11e-01 -0.0635 0.0964 0.514 pDC L2
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 8.29e-01 -0.0201 0.0931 0.514 pDC L2
ENSG00000136021 SCYL2 -549640 sc-eQTL 4.31e-01 -0.0799 0.101 0.514 pDC L2
ENSG00000139354 GAS2L3 -856183 sc-eQTL 7.54e-01 -0.0258 0.082 0.514 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075089 ACTR6 -481622 sc-eQTL 1.49e-01 -0.127 0.0874 0.5 B_Memory LOneK1K
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 5.56e-01 -0.0516 0.0875 0.5 B_Memory LOneK1K
ENSG00000136021 SCYL2 -549640 sc-eQTL 9.25e-01 0.0065 0.0686 0.5 B_Memory LOneK1K
ENSG00000075089 ACTR6 -481622 sc-eQTL 4.13e-01 0.0681 0.083 0.5 B_Naive LOneK1K
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.69e-01 -0.104 0.0752 0.5 B_Naive LOneK1K
ENSG00000136021 SCYL2 -549640 sc-eQTL 6.98e-02 -0.135 0.0739 0.5 B_Naive LOneK1K
ENSG00000075089 ACTR6 -481622 sc-eQTL 7.00e-01 0.0292 0.0757 0.5 CD14_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 3.86e-02 0.124 0.0594 0.5 CD14_Mono LOneK1K
ENSG00000136021 SCYL2 -549640 sc-eQTL 7.55e-01 -0.0211 0.0674 0.5 CD14_Mono LOneK1K
ENSG00000139354 GAS2L3 -856183 sc-eQTL 5.05e-01 -0.0432 0.0647 0.5 CD14_Mono LOneK1K
ENSG00000075089 ACTR6 -481622 sc-eQTL 5.23e-01 0.0572 0.0894 0.502 CD16_Mono LOneK1K
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.08e-01 0.135 0.0833 0.502 CD16_Mono LOneK1K
ENSG00000136021 SCYL2 -549640 sc-eQTL 1.89e-01 0.109 0.0826 0.502 CD16_Mono LOneK1K
ENSG00000139354 GAS2L3 -856183 sc-eQTL 6.17e-01 -0.04 0.08 0.502 CD16_Mono LOneK1K
ENSG00000075089 ACTR6 -481622 sc-eQTL 3.36e-01 -0.0695 0.0721 0.504 NK_CD56dim LOneK1K
ENSG00000111647 UHRF1BP1L -425374 sc-eQTL 1.16e-01 -0.0951 0.0603 0.504 NK_CD56dim LOneK1K
ENSG00000136021 SCYL2 -549640 sc-eQTL 9.41e-02 -0.103 0.061 0.504 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000185046 ANKS1B -267154 eQTL 0.0434 -0.0573 0.0283 0.0 0.0 0.459

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina