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Genes within 1Mb (chr12:97695694:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075415 SLC25A3 -897897 sc-eQTL 6.13e-01 -0.0299 0.0589 0.449 B L1
ENSG00000120802 TMPO -819818 sc-eQTL 9.77e-01 -0.00148 0.0503 0.449 B L1
ENSG00000120868 APAF1 -949447 sc-eQTL 3.84e-01 0.0589 0.0674 0.449 B L1
ENSG00000139350 NEDD1 788471 sc-eQTL 1.03e-01 -0.138 0.0839 0.449 B L1
ENSG00000166130 IKBIP -949419 sc-eQTL 3.35e-01 -0.0663 0.0687 0.449 B L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 2.70e-01 -0.0697 0.0631 0.449 B L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.33e-01 -0.0848 0.0709 0.449 CD4T L1
ENSG00000120802 TMPO -819818 sc-eQTL 5.38e-01 -0.035 0.0568 0.449 CD4T L1
ENSG00000120868 APAF1 -949447 sc-eQTL 6.22e-01 0.0272 0.055 0.449 CD4T L1
ENSG00000139350 NEDD1 788471 sc-eQTL 6.54e-01 -0.0279 0.0622 0.449 CD4T L1
ENSG00000166130 IKBIP -949419 sc-eQTL 3.97e-02 0.158 0.0762 0.449 CD4T L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.99e-01 -0.038 0.0562 0.449 CD4T L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 3.11e-01 -0.0583 0.0575 0.449 CD8T L1
ENSG00000120802 TMPO -819818 sc-eQTL 8.23e-01 -0.0118 0.0527 0.449 CD8T L1
ENSG00000120868 APAF1 -949447 sc-eQTL 2.24e-01 0.0775 0.0636 0.449 CD8T L1
ENSG00000139350 NEDD1 788471 sc-eQTL 5.41e-02 -0.134 0.0692 0.449 CD8T L1
ENSG00000166130 IKBIP -949419 sc-eQTL 8.09e-01 0.0208 0.086 0.449 CD8T L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 8.98e-01 0.00794 0.0621 0.449 CD8T L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 4.34e-01 -0.0467 0.0596 0.453 DC L1
ENSG00000120802 TMPO -819818 sc-eQTL 2.32e-01 -0.0964 0.0804 0.453 DC L1
ENSG00000120868 APAF1 -949447 sc-eQTL 9.12e-02 -0.113 0.0665 0.453 DC L1
ENSG00000139350 NEDD1 788471 sc-eQTL 8.47e-01 -0.0175 0.0907 0.453 DC L1
ENSG00000166130 IKBIP -949419 sc-eQTL 5.85e-01 0.0485 0.0887 0.453 DC L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 7.07e-01 0.029 0.077 0.453 DC L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.96e-01 -0.0505 0.0482 0.449 Mono L1
ENSG00000120802 TMPO -819818 sc-eQTL 5.67e-01 -0.0335 0.0584 0.449 Mono L1
ENSG00000120868 APAF1 -949447 sc-eQTL 4.45e-01 -0.0346 0.0451 0.449 Mono L1
ENSG00000139350 NEDD1 788471 sc-eQTL 1.94e-01 0.107 0.082 0.449 Mono L1
ENSG00000166130 IKBIP -949419 sc-eQTL 2.78e-02 0.132 0.0597 0.449 Mono L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.03e-01 0.00761 0.0621 0.449 Mono L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 3.64e-02 -0.161 0.0766 0.451 NK L1
ENSG00000120802 TMPO -819818 sc-eQTL 6.44e-01 -0.0303 0.0654 0.451 NK L1
ENSG00000120868 APAF1 -949447 sc-eQTL 3.29e-01 -0.0666 0.0681 0.451 NK L1
ENSG00000139350 NEDD1 788471 sc-eQTL 5.54e-01 0.0437 0.0739 0.451 NK L1
ENSG00000166130 IKBIP -949419 sc-eQTL 9.88e-01 -0.00107 0.0711 0.451 NK L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 6.39e-01 0.0321 0.0683 0.451 NK L1
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.73e-01 -0.0717 0.0652 0.449 Other_T L1
ENSG00000120802 TMPO -819818 sc-eQTL 7.50e-01 0.0124 0.0387 0.449 Other_T L1
ENSG00000120868 APAF1 -949447 sc-eQTL 7.29e-01 0.0274 0.0791 0.449 Other_T L1
ENSG00000139350 NEDD1 788471 sc-eQTL 7.39e-01 0.0284 0.0852 0.449 Other_T L1
ENSG00000166130 IKBIP -949419 sc-eQTL 8.21e-01 0.0155 0.0681 0.449 Other_T L1
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 3.74e-01 -0.0492 0.0553 0.449 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075415 SLC25A3 -897897 sc-eQTL 9.51e-01 -0.00599 0.097 0.459 B_Activated L2
ENSG00000120802 TMPO -819818 sc-eQTL 6.22e-01 0.0443 0.0898 0.459 B_Activated L2
ENSG00000120868 APAF1 -949447 sc-eQTL 6.16e-01 0.0503 0.0999 0.459 B_Activated L2
ENSG00000139350 NEDD1 788471 sc-eQTL 4.73e-01 0.0689 0.0958 0.459 B_Activated L2
ENSG00000166130 IKBIP -949419 sc-eQTL 9.70e-01 0.0038 0.101 0.459 B_Activated L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 1.16e-01 0.139 0.0882 0.459 B_Activated L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 4.01e-01 -0.0683 0.0811 0.448 B_Intermediate L2
ENSG00000120802 TMPO -819818 sc-eQTL 8.34e-01 0.0139 0.0662 0.448 B_Intermediate L2
ENSG00000120868 APAF1 -949447 sc-eQTL 6.34e-02 0.158 0.0845 0.448 B_Intermediate L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.58e-01 -0.0165 0.0918 0.448 B_Intermediate L2
ENSG00000166130 IKBIP -949419 sc-eQTL 1.15e-01 -0.134 0.0847 0.448 B_Intermediate L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 5.77e-01 -0.0429 0.0768 0.448 B_Intermediate L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 3.71e-03 -0.23 0.0784 0.453 B_Memory L2
ENSG00000120802 TMPO -819818 sc-eQTL 3.02e-01 0.0833 0.0805 0.453 B_Memory L2
ENSG00000120868 APAF1 -949447 sc-eQTL 2.33e-01 0.11 0.0923 0.453 B_Memory L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.16e-01 -0.0218 0.0935 0.453 B_Memory L2
ENSG00000166130 IKBIP -949419 sc-eQTL 4.53e-01 -0.0689 0.0916 0.453 B_Memory L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 1.78e-01 0.117 0.0865 0.453 B_Memory L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 5.76e-01 -0.0401 0.0714 0.449 B_Naive1 L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.54e-01 -0.0174 0.0556 0.449 B_Naive1 L2
ENSG00000120868 APAF1 -949447 sc-eQTL 4.79e-01 -0.0592 0.0835 0.449 B_Naive1 L2
ENSG00000139350 NEDD1 788471 sc-eQTL 3.04e-02 -0.198 0.0908 0.449 B_Naive1 L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.21e-01 -0.108 0.088 0.449 B_Naive1 L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 3.92e-01 -0.0675 0.0787 0.449 B_Naive1 L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 7.99e-01 -0.0227 0.0886 0.451 B_Naive2 L2
ENSG00000120802 TMPO -819818 sc-eQTL 4.58e-01 0.0556 0.0747 0.451 B_Naive2 L2
ENSG00000120868 APAF1 -949447 sc-eQTL 7.13e-02 0.156 0.086 0.451 B_Naive2 L2
ENSG00000139350 NEDD1 788471 sc-eQTL 7.44e-01 -0.0321 0.0981 0.451 B_Naive2 L2
ENSG00000166130 IKBIP -949419 sc-eQTL 7.91e-01 0.0225 0.0851 0.451 B_Naive2 L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.14e-01 -0.0088 0.0817 0.451 B_Naive2 L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 7.36e-01 0.0306 0.0905 0.448 CD4_CTL L2
ENSG00000120802 TMPO -819818 sc-eQTL 9.04e-01 -0.0105 0.0867 0.448 CD4_CTL L2
ENSG00000120868 APAF1 -949447 sc-eQTL 9.79e-01 -0.00241 0.0927 0.448 CD4_CTL L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.10e-02 0.175 0.0996 0.448 CD4_CTL L2
ENSG00000166130 IKBIP -949419 sc-eQTL 6.96e-01 -0.0357 0.0912 0.448 CD4_CTL L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.20e-01 0.0774 0.0958 0.448 CD4_CTL L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.25e-01 -0.0841 0.0691 0.449 CD4_Naive L2
ENSG00000120802 TMPO -819818 sc-eQTL 6.23e-01 -0.0308 0.0626 0.449 CD4_Naive L2
ENSG00000120868 APAF1 -949447 sc-eQTL 5.37e-01 0.0409 0.0661 0.449 CD4_Naive L2
ENSG00000139350 NEDD1 788471 sc-eQTL 2.51e-01 -0.0773 0.0671 0.449 CD4_Naive L2
ENSG00000166130 IKBIP -949419 sc-eQTL 1.70e-02 0.178 0.0739 0.449 CD4_Naive L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.30e-01 -0.00581 0.0659 0.449 CD4_Naive L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.86e-01 -0.0898 0.0677 0.449 CD4_TCM L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.16e-01 -0.0224 0.0616 0.449 CD4_TCM L2
ENSG00000120868 APAF1 -949447 sc-eQTL 5.76e-01 0.0427 0.0763 0.449 CD4_TCM L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.81e-01 -0.0117 0.0779 0.449 CD4_TCM L2
ENSG00000166130 IKBIP -949419 sc-eQTL 7.21e-01 -0.0311 0.087 0.449 CD4_TCM L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 8.06e-01 0.0162 0.066 0.449 CD4_TCM L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 8.61e-01 0.0143 0.0817 0.449 CD4_TEM L2
ENSG00000120802 TMPO -819818 sc-eQTL 8.39e-01 0.0157 0.0772 0.449 CD4_TEM L2
ENSG00000120868 APAF1 -949447 sc-eQTL 5.08e-01 0.0581 0.0876 0.449 CD4_TEM L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.53e-01 -0.0168 0.0908 0.449 CD4_TEM L2
ENSG00000166130 IKBIP -949419 sc-eQTL 9.60e-01 0.00483 0.0959 0.449 CD4_TEM L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.95e-01 -0.0564 0.0825 0.449 CD4_TEM L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.74e-01 -0.0878 0.08 0.449 CD8_CTL L2
ENSG00000120802 TMPO -819818 sc-eQTL 8.06e-01 0.0184 0.0749 0.449 CD8_CTL L2
ENSG00000120868 APAF1 -949447 sc-eQTL 5.97e-01 0.0442 0.0835 0.449 CD8_CTL L2
ENSG00000139350 NEDD1 788471 sc-eQTL 5.75e-02 -0.158 0.0827 0.449 CD8_CTL L2
ENSG00000166130 IKBIP -949419 sc-eQTL 3.34e-01 -0.0863 0.0892 0.449 CD8_CTL L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.58e-01 0.00437 0.0825 0.449 CD8_CTL L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.01e-01 -0.124 0.0753 0.449 CD8_Naive L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.89e-01 0.0193 0.0722 0.449 CD8_Naive L2
ENSG00000120868 APAF1 -949447 sc-eQTL 9.91e-01 0.00104 0.0887 0.449 CD8_Naive L2
ENSG00000139350 NEDD1 788471 sc-eQTL 1.43e-02 -0.196 0.0793 0.449 CD8_Naive L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.86e-01 0.0979 0.0915 0.449 CD8_Naive L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 3.59e-01 0.0696 0.0756 0.449 CD8_Naive L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.65e-01 -0.132 0.0945 0.451 CD8_TCM L2
ENSG00000120802 TMPO -819818 sc-eQTL 3.38e-01 -0.0761 0.0792 0.451 CD8_TCM L2
ENSG00000120868 APAF1 -949447 sc-eQTL 5.21e-01 0.058 0.0903 0.451 CD8_TCM L2
ENSG00000139350 NEDD1 788471 sc-eQTL 6.07e-01 -0.0468 0.0908 0.451 CD8_TCM L2
ENSG00000166130 IKBIP -949419 sc-eQTL 9.94e-01 -0.000687 0.0919 0.451 CD8_TCM L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 6.03e-01 -0.048 0.0921 0.451 CD8_TCM L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 5.21e-01 0.0531 0.0826 0.45 CD8_TEM L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.90e-01 -0.0225 0.0847 0.45 CD8_TEM L2
ENSG00000120868 APAF1 -949447 sc-eQTL 4.79e-01 0.0687 0.0969 0.45 CD8_TEM L2
ENSG00000139350 NEDD1 788471 sc-eQTL 7.98e-01 0.0252 0.0981 0.45 CD8_TEM L2
ENSG00000166130 IKBIP -949419 sc-eQTL 9.63e-01 -0.00455 0.0966 0.45 CD8_TEM L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 5.66e-01 -0.0518 0.0903 0.45 CD8_TEM L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.60e-02 -0.194 0.0867 0.45 MAIT L2
ENSG00000120802 TMPO -819818 sc-eQTL 6.09e-02 0.157 0.0831 0.45 MAIT L2
ENSG00000120868 APAF1 -949447 sc-eQTL 6.71e-01 -0.0352 0.0826 0.45 MAIT L2
ENSG00000139350 NEDD1 788471 sc-eQTL 5.39e-01 0.0552 0.0898 0.45 MAIT L2
ENSG00000166130 IKBIP -949419 sc-eQTL 3.01e-01 -0.0883 0.0851 0.45 MAIT L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 6.38e-01 -0.0414 0.0878 0.45 MAIT L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.99e-01 -0.105 0.0814 0.453 NK_CD56bright L2
ENSG00000120802 TMPO -819818 sc-eQTL 2.59e-01 0.0942 0.0832 0.453 NK_CD56bright L2
ENSG00000120868 APAF1 -949447 sc-eQTL 4.19e-01 -0.0751 0.0927 0.453 NK_CD56bright L2
ENSG00000139350 NEDD1 788471 sc-eQTL 9.17e-01 0.00965 0.0924 0.453 NK_CD56bright L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.00e-01 -0.11 0.0858 0.453 NK_CD56bright L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.22e-01 -0.0092 0.0935 0.453 NK_CD56bright L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.98e-02 -0.177 0.0811 0.45 NK_CD56dim L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.96e-01 -0.0185 0.0715 0.45 NK_CD56dim L2
ENSG00000120868 APAF1 -949447 sc-eQTL 1.64e-01 -0.104 0.0747 0.45 NK_CD56dim L2
ENSG00000139350 NEDD1 788471 sc-eQTL 5.39e-01 0.0507 0.0824 0.45 NK_CD56dim L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.51e-01 0.0902 0.0784 0.45 NK_CD56dim L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.82e-01 0.0559 0.0794 0.45 NK_CD56dim L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 6.26e-02 -0.161 0.0859 0.45 NK_HLA L2
ENSG00000120802 TMPO -819818 sc-eQTL 9.31e-01 -0.00791 0.091 0.45 NK_HLA L2
ENSG00000120868 APAF1 -949447 sc-eQTL 8.34e-01 0.019 0.0904 0.45 NK_HLA L2
ENSG00000139350 NEDD1 788471 sc-eQTL 3.72e-01 -0.0786 0.0878 0.45 NK_HLA L2
ENSG00000166130 IKBIP -949419 sc-eQTL 5.97e-01 -0.0484 0.0914 0.45 NK_HLA L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.35e-01 0.0671 0.0858 0.45 NK_HLA L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 7.48e-02 -0.153 0.0857 0.45 NK_cytokine L2
ENSG00000120802 TMPO -819818 sc-eQTL 9.44e-01 -0.00523 0.0748 0.45 NK_cytokine L2
ENSG00000120868 APAF1 -949447 sc-eQTL 3.84e-01 -0.0716 0.082 0.45 NK_cytokine L2
ENSG00000139350 NEDD1 788471 sc-eQTL 6.79e-01 -0.0364 0.0877 0.45 NK_cytokine L2
ENSG00000166130 IKBIP -949419 sc-eQTL 8.63e-01 -0.0151 0.0876 0.45 NK_cytokine L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 7.03e-01 0.0323 0.0847 0.45 NK_cytokine L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.04e-01 -0.11 0.0674 0.452 PB L2
ENSG00000120802 TMPO -819818 sc-eQTL 8.48e-01 0.0248 0.129 0.452 PB L2
ENSG00000120868 APAF1 -949447 sc-eQTL 2.28e-01 0.145 0.12 0.452 PB L2
ENSG00000139350 NEDD1 788471 sc-eQTL 2.38e-04 0.477 0.126 0.452 PB L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.98e-01 -0.0937 0.0897 0.452 PB L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.20e-01 -0.0966 0.12 0.452 PB L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 3.06e-01 -0.0588 0.0573 0.454 Pro_T L2
ENSG00000120802 TMPO -819818 sc-eQTL 3.80e-01 -0.0417 0.0474 0.454 Pro_T L2
ENSG00000120868 APAF1 -949447 sc-eQTL 8.58e-01 -0.017 0.095 0.454 Pro_T L2
ENSG00000139350 NEDD1 788471 sc-eQTL 3.24e-01 -0.0841 0.0851 0.454 Pro_T L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.53e-01 -0.0762 0.0665 0.454 Pro_T L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 3.42e-01 -0.0698 0.0733 0.454 Pro_T L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 8.33e-02 -0.151 0.087 0.449 Treg L2
ENSG00000120802 TMPO -819818 sc-eQTL 9.20e-01 0.00767 0.0763 0.449 Treg L2
ENSG00000120868 APAF1 -949447 sc-eQTL 4.62e-01 -0.0692 0.094 0.449 Treg L2
ENSG00000139350 NEDD1 788471 sc-eQTL 2.83e-01 0.102 0.0947 0.449 Treg L2
ENSG00000166130 IKBIP -949419 sc-eQTL 7.75e-01 0.0259 0.0908 0.449 Treg L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 7.10e-01 -0.0304 0.0816 0.449 Treg L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 9.33e-01 0.006 0.0711 0.454 cDC L2
ENSG00000120802 TMPO -819818 sc-eQTL 4.78e-01 0.0629 0.0885 0.454 cDC L2
ENSG00000120868 APAF1 -949447 sc-eQTL 3.33e-03 -0.205 0.0688 0.454 cDC L2
ENSG00000139350 NEDD1 788471 sc-eQTL 1.39e-01 -0.142 0.0954 0.454 cDC L2
ENSG00000166130 IKBIP -949419 sc-eQTL 9.29e-01 0.00806 0.0906 0.454 cDC L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.77e-01 0.0636 0.0893 0.454 cDC L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 5.77e-01 -0.0258 0.0462 0.449 cMono_IL1B L2
ENSG00000120802 TMPO -819818 sc-eQTL 9.37e-01 -0.00519 0.0652 0.449 cMono_IL1B L2
ENSG00000120868 APAF1 -949447 sc-eQTL 8.79e-01 -0.00761 0.0499 0.449 cMono_IL1B L2
ENSG00000139350 NEDD1 788471 sc-eQTL 4.91e-01 0.0616 0.0892 0.449 cMono_IL1B L2
ENSG00000166130 IKBIP -949419 sc-eQTL 7.55e-04 0.225 0.0658 0.449 cMono_IL1B L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 6.04e-01 0.0381 0.0733 0.449 cMono_IL1B L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 2.04e-02 -0.122 0.0522 0.449 cMono_S100A L2
ENSG00000120802 TMPO -819818 sc-eQTL 8.92e-01 -0.00956 0.0705 0.449 cMono_S100A L2
ENSG00000120868 APAF1 -949447 sc-eQTL 6.66e-01 0.0272 0.063 0.449 cMono_S100A L2
ENSG00000139350 NEDD1 788471 sc-eQTL 8.32e-01 0.0203 0.0955 0.449 cMono_S100A L2
ENSG00000166130 IKBIP -949419 sc-eQTL 6.82e-01 0.0316 0.077 0.449 cMono_S100A L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.40e-01 0.00568 0.0754 0.449 cMono_S100A L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 7.22e-02 -0.179 0.0986 0.458 gdT L2
ENSG00000120802 TMPO -819818 sc-eQTL 4.60e-01 0.0779 0.105 0.458 gdT L2
ENSG00000120868 APAF1 -949447 sc-eQTL 1.29e-01 0.172 0.112 0.458 gdT L2
ENSG00000139350 NEDD1 788471 sc-eQTL 9.65e-01 -0.00496 0.112 0.458 gdT L2
ENSG00000166130 IKBIP -949419 sc-eQTL 2.80e-01 0.119 0.11 0.458 gdT L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 3.39e-01 0.102 0.106 0.458 gdT L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 6.73e-01 0.0275 0.0651 0.451 intMono L2
ENSG00000120802 TMPO -819818 sc-eQTL 6.49e-01 0.0343 0.0753 0.451 intMono L2
ENSG00000120868 APAF1 -949447 sc-eQTL 2.00e-01 -0.0939 0.0731 0.451 intMono L2
ENSG00000139350 NEDD1 788471 sc-eQTL 6.87e-03 0.243 0.089 0.451 intMono L2
ENSG00000166130 IKBIP -949419 sc-eQTL 1.15e-01 -0.127 0.0804 0.451 intMono L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.93e-01 -0.063 0.0917 0.451 intMono L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 4.89e-01 0.0511 0.0737 0.448 ncMono L2
ENSG00000120802 TMPO -819818 sc-eQTL 7.80e-01 -0.0159 0.0566 0.448 ncMono L2
ENSG00000120868 APAF1 -949447 sc-eQTL 9.80e-01 0.00176 0.0703 0.448 ncMono L2
ENSG00000139350 NEDD1 788471 sc-eQTL 1.47e-01 0.118 0.0811 0.448 ncMono L2
ENSG00000166130 IKBIP -949419 sc-eQTL 8.97e-02 0.143 0.0839 0.448 ncMono L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 5.71e-01 0.0421 0.0742 0.448 ncMono L2
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.05e-01 -0.124 0.0762 0.458 pDC L2
ENSG00000120802 TMPO -819818 sc-eQTL 3.67e-01 -0.0888 0.0981 0.458 pDC L2
ENSG00000120868 APAF1 -949447 sc-eQTL 1.84e-01 0.121 0.0905 0.458 pDC L2
ENSG00000139350 NEDD1 788471 sc-eQTL 6.15e-01 0.0508 0.101 0.458 pDC L2
ENSG00000166130 IKBIP -949419 sc-eQTL 8.31e-01 -0.0222 0.104 0.458 pDC L2
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.14e-01 0.0696 0.0849 0.458 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.80e-01 -0.109 0.0811 0.449 B_Memory LOneK1K
ENSG00000120802 TMPO -819818 sc-eQTL 7.34e-01 0.0209 0.0613 0.449 B_Memory LOneK1K
ENSG00000120868 APAF1 -949447 sc-eQTL 1.11e-01 0.131 0.0817 0.449 B_Memory LOneK1K
ENSG00000139350 NEDD1 788471 sc-eQTL 8.70e-01 0.0151 0.0926 0.449 B_Memory LOneK1K
ENSG00000166130 IKBIP -949419 sc-eQTL 3.89e-01 -0.0754 0.0873 0.449 B_Memory LOneK1K
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 9.78e-01 0.00193 0.0691 0.449 B_Memory LOneK1K
ENSG00000075415 SLC25A3 -897897 sc-eQTL 6.34e-01 -0.0337 0.0707 0.449 B_Naive LOneK1K
ENSG00000120802 TMPO -819818 sc-eQTL 7.19e-01 0.0206 0.0572 0.449 B_Naive LOneK1K
ENSG00000120868 APAF1 -949447 sc-eQTL 7.04e-01 0.0305 0.0802 0.449 B_Naive LOneK1K
ENSG00000139350 NEDD1 788471 sc-eQTL 3.48e-02 -0.191 0.0899 0.449 B_Naive LOneK1K
ENSG00000166130 IKBIP -949419 sc-eQTL 4.38e-01 -0.0633 0.0816 0.449 B_Naive LOneK1K
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 6.61e-01 -0.0318 0.0723 0.449 B_Naive LOneK1K
ENSG00000075415 SLC25A3 -897897 sc-eQTL 1.20e-01 -0.0716 0.0459 0.449 CD14_Mono LOneK1K
ENSG00000120802 TMPO -819818 sc-eQTL 7.73e-01 -0.0182 0.0632 0.449 CD14_Mono LOneK1K
ENSG00000120868 APAF1 -949447 sc-eQTL 5.23e-01 -0.0317 0.0495 0.449 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 788471 sc-eQTL 5.15e-01 0.0586 0.0898 0.449 CD14_Mono LOneK1K
ENSG00000166130 IKBIP -949419 sc-eQTL 3.39e-02 0.132 0.0618 0.449 CD14_Mono LOneK1K
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.41e-01 0.0502 0.065 0.449 CD14_Mono LOneK1K
ENSG00000075415 SLC25A3 -897897 sc-eQTL 9.30e-01 0.00554 0.0633 0.45 CD16_Mono LOneK1K
ENSG00000120802 TMPO -819818 sc-eQTL 6.14e-01 -0.0218 0.0431 0.45 CD16_Mono LOneK1K
ENSG00000120868 APAF1 -949447 sc-eQTL 4.47e-01 -0.0452 0.0593 0.45 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 788471 sc-eQTL 1.03e-02 0.21 0.0812 0.45 CD16_Mono LOneK1K
ENSG00000166130 IKBIP -949419 sc-eQTL 8.04e-01 0.0193 0.0776 0.45 CD16_Mono LOneK1K
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 7.26e-01 0.0234 0.0667 0.45 CD16_Mono LOneK1K
ENSG00000075415 SLC25A3 -897897 sc-eQTL 5.11e-02 -0.151 0.0768 0.45 NK_CD56dim LOneK1K
ENSG00000120802 TMPO -819818 sc-eQTL 4.28e-01 -0.0536 0.0675 0.45 NK_CD56dim LOneK1K
ENSG00000120868 APAF1 -949447 sc-eQTL 3.72e-01 -0.0614 0.0687 0.45 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 788471 sc-eQTL 7.00e-01 0.029 0.0751 0.45 NK_CD56dim LOneK1K
ENSG00000166130 IKBIP -949419 sc-eQTL 6.33e-01 0.0352 0.0735 0.45 NK_CD56dim LOneK1K
ENSG00000257167 TMPO-AS1 -820728 sc-eQTL 4.49e-01 0.0525 0.0693 0.45 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000245017 \N -808161 3.14e-07 1.5e-07 6.42e-08 2.05e-07 9.94e-08 8.63e-08 2.1e-07 5.89e-08 1.85e-07 1.03e-07 1.61e-07 1.37e-07 2.05e-07 8e-08 5.36e-08 9.11e-08 4.25e-08 1.8e-07 7.29e-08 5.48e-08 1.26e-07 1.65e-07 1.64e-07 3.49e-08 1.98e-07 1.65e-07 1.23e-07 1.12e-07 1.32e-07 1.06e-07 1.09e-07 3.66e-08 3.29e-08 9.52e-08 3.12e-08 3.18e-08 4.43e-08 8.25e-08 6.39e-08 4.08e-08 5.42e-08 1.48e-07 4.76e-08 1.35e-08 3.41e-08 1.55e-08 7.83e-08 2e-09 4.91e-08