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Genes within 1Mb (chr12:96812990:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 412510 sc-eQTL 1.10e-04 0.17 0.043 0.421 B L1
ENSG00000111144 LTA4H 769470 sc-eQTL 5.76e-01 -0.031 0.0553 0.421 B L1
ENSG00000111145 ELK3 618615 sc-eQTL 5.48e-01 0.0355 0.0589 0.421 B L1
ENSG00000139343 SNRPF 954062 sc-eQTL 3.88e-01 0.0462 0.0534 0.421 B L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 8.43e-01 0.0155 0.0781 0.421 B L1
ENSG00000059758 CDK17 412510 sc-eQTL 4.75e-01 0.026 0.0364 0.421 CD4T L1
ENSG00000111144 LTA4H 769470 sc-eQTL 3.37e-01 0.048 0.0499 0.421 CD4T L1
ENSG00000111145 ELK3 618615 sc-eQTL 9.69e-01 -0.00213 0.0542 0.421 CD4T L1
ENSG00000139343 SNRPF 954062 sc-eQTL 2.22e-01 0.0578 0.0472 0.421 CD4T L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.94e-01 -0.0756 0.0581 0.421 CD4T L1
ENSG00000059758 CDK17 412510 sc-eQTL 6.50e-02 0.0686 0.037 0.421 CD8T L1
ENSG00000111144 LTA4H 769470 sc-eQTL 1.83e-01 -0.0533 0.0398 0.421 CD8T L1
ENSG00000111145 ELK3 618615 sc-eQTL 9.08e-01 -0.00697 0.0602 0.421 CD8T L1
ENSG00000139343 SNRPF 954062 sc-eQTL 3.46e-01 -0.0465 0.0492 0.421 CD8T L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 6.76e-01 0.0274 0.0656 0.421 CD8T L1
ENSG00000059758 CDK17 412510 sc-eQTL 5.67e-02 0.137 0.0717 0.419 DC L1
ENSG00000084110 HAL 816625 sc-eQTL 6.33e-01 0.0394 0.0823 0.419 DC L1
ENSG00000111144 LTA4H 769470 sc-eQTL 2.66e-02 0.149 0.0665 0.419 DC L1
ENSG00000111145 ELK3 618615 sc-eQTL 8.23e-01 0.0185 0.0825 0.419 DC L1
ENSG00000139343 SNRPF 954062 sc-eQTL 3.62e-01 -0.0625 0.0685 0.419 DC L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 5.72e-01 -0.0498 0.088 0.419 DC L1
ENSG00000257715 AC007298.1 787667 sc-eQTL 3.60e-01 0.0728 0.0794 0.419 DC L1
ENSG00000059758 CDK17 412510 sc-eQTL 6.61e-01 0.0247 0.0563 0.421 Mono L1
ENSG00000084110 HAL 816625 sc-eQTL 7.09e-01 0.0265 0.0709 0.421 Mono L1
ENSG00000111144 LTA4H 769470 sc-eQTL 3.90e-01 0.0688 0.0799 0.421 Mono L1
ENSG00000111145 ELK3 618615 sc-eQTL 8.77e-01 -0.00834 0.0538 0.421 Mono L1
ENSG00000139343 SNRPF 954062 sc-eQTL 6.54e-01 0.0227 0.0507 0.421 Mono L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.45e-06 0.365 0.0737 0.421 Mono L1
ENSG00000257715 AC007298.1 787667 sc-eQTL 5.17e-01 -0.0489 0.0754 0.421 Mono L1
ENSG00000059758 CDK17 412510 sc-eQTL 7.91e-01 -0.0111 0.042 0.423 NK L1
ENSG00000111144 LTA4H 769470 sc-eQTL 1.98e-01 -0.0916 0.071 0.423 NK L1
ENSG00000111145 ELK3 618615 sc-eQTL 9.96e-01 -0.000351 0.0676 0.423 NK L1
ENSG00000139343 SNRPF 954062 sc-eQTL 7.67e-01 -0.0166 0.056 0.423 NK L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.59e-01 0.0999 0.0706 0.423 NK L1
ENSG00000059758 CDK17 412510 sc-eQTL 6.09e-01 0.0177 0.0346 0.421 Other_T L1
ENSG00000111144 LTA4H 769470 sc-eQTL 6.56e-01 -0.0322 0.0723 0.421 Other_T L1
ENSG00000111145 ELK3 618615 sc-eQTL 6.67e-01 -0.0243 0.0564 0.421 Other_T L1
ENSG00000139343 SNRPF 954062 sc-eQTL 9.56e-01 0.0029 0.0525 0.421 Other_T L1
ENSG00000139350 NEDD1 -94233 sc-eQTL 9.52e-01 0.00485 0.0799 0.421 Other_T L1
ENSG00000188596 CFAP54 323419 sc-eQTL 3.21e-02 -0.177 0.0819 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 412510 sc-eQTL 2.69e-01 0.089 0.0803 0.408 B_Activated L2
ENSG00000111144 LTA4H 769470 sc-eQTL 9.13e-01 -0.00999 0.0912 0.408 B_Activated L2
ENSG00000111145 ELK3 618615 sc-eQTL 9.67e-01 -0.00401 0.0966 0.408 B_Activated L2
ENSG00000139343 SNRPF 954062 sc-eQTL 6.29e-01 -0.044 0.091 0.408 B_Activated L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 7.83e-01 -0.0263 0.0952 0.408 B_Activated L2
ENSG00000059758 CDK17 412510 sc-eQTL 1.72e-02 0.163 0.0678 0.421 B_Intermediate L2
ENSG00000111144 LTA4H 769470 sc-eQTL 9.00e-01 0.00841 0.0666 0.421 B_Intermediate L2
ENSG00000111145 ELK3 618615 sc-eQTL 2.79e-01 0.0812 0.0748 0.421 B_Intermediate L2
ENSG00000139343 SNRPF 954062 sc-eQTL 5.67e-01 -0.0429 0.0747 0.421 B_Intermediate L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.95e-01 0.113 0.0872 0.421 B_Intermediate L2
ENSG00000059758 CDK17 412510 sc-eQTL 1.06e-01 0.106 0.0655 0.418 B_Memory L2
ENSG00000111144 LTA4H 769470 sc-eQTL 2.18e-01 0.0936 0.0758 0.418 B_Memory L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.96e-01 -0.0293 0.0748 0.418 B_Memory L2
ENSG00000139343 SNRPF 954062 sc-eQTL 8.72e-01 -0.0128 0.0793 0.418 B_Memory L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.00e-01 -0.144 0.0871 0.418 B_Memory L2
ENSG00000059758 CDK17 412510 sc-eQTL 4.11e-03 0.157 0.0542 0.421 B_Naive1 L2
ENSG00000111144 LTA4H 769470 sc-eQTL 8.37e-01 0.0119 0.0578 0.421 B_Naive1 L2
ENSG00000111145 ELK3 618615 sc-eQTL 9.39e-02 0.114 0.0679 0.421 B_Naive1 L2
ENSG00000139343 SNRPF 954062 sc-eQTL 5.62e-01 -0.0385 0.0664 0.421 B_Naive1 L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 8.99e-01 -0.0108 0.0853 0.421 B_Naive1 L2
ENSG00000059758 CDK17 412510 sc-eQTL 7.93e-01 0.0182 0.0694 0.421 B_Naive2 L2
ENSG00000111144 LTA4H 769470 sc-eQTL 8.27e-01 -0.0144 0.0657 0.421 B_Naive2 L2
ENSG00000111145 ELK3 618615 sc-eQTL 9.99e-01 0.00012 0.0775 0.421 B_Naive2 L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.96e-01 0.0804 0.0767 0.421 B_Naive2 L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 4.10e-01 0.0755 0.0914 0.421 B_Naive2 L2
ENSG00000059758 CDK17 412510 sc-eQTL 5.09e-01 0.0419 0.0634 0.42 CD4_CTL L2
ENSG00000111144 LTA4H 769470 sc-eQTL 6.49e-01 0.0407 0.0894 0.42 CD4_CTL L2
ENSG00000111145 ELK3 618615 sc-eQTL 7.01e-01 0.0348 0.0905 0.42 CD4_CTL L2
ENSG00000139343 SNRPF 954062 sc-eQTL 9.56e-01 -0.00434 0.0787 0.42 CD4_CTL L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 5.63e-01 0.0526 0.091 0.42 CD4_CTL L2
ENSG00000059758 CDK17 412510 sc-eQTL 3.00e-01 0.0413 0.0397 0.421 CD4_Naive L2
ENSG00000111144 LTA4H 769470 sc-eQTL 4.89e-01 0.0399 0.0576 0.421 CD4_Naive L2
ENSG00000111145 ELK3 618615 sc-eQTL 5.82e-01 -0.0317 0.0576 0.421 CD4_Naive L2
ENSG00000139343 SNRPF 954062 sc-eQTL 4.43e-01 0.0393 0.0511 0.421 CD4_Naive L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 6.42e-01 -0.0293 0.063 0.421 CD4_Naive L2
ENSG00000059758 CDK17 412510 sc-eQTL 4.07e-01 0.0325 0.0391 0.421 CD4_TCM L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.27e-01 0.042 0.0664 0.421 CD4_TCM L2
ENSG00000111145 ELK3 618615 sc-eQTL 4.50e-01 -0.0494 0.0653 0.421 CD4_TCM L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.42e-01 0.0627 0.0535 0.421 CD4_TCM L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 2.91e-01 -0.0773 0.0731 0.421 CD4_TCM L2
ENSG00000059758 CDK17 412510 sc-eQTL 1.05e-01 0.0767 0.0472 0.421 CD4_TEM L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.55e-01 0.0434 0.0733 0.421 CD4_TEM L2
ENSG00000111145 ELK3 618615 sc-eQTL 9.76e-01 -0.00207 0.0681 0.421 CD4_TEM L2
ENSG00000139343 SNRPF 954062 sc-eQTL 3.78e-01 0.0629 0.0712 0.421 CD4_TEM L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 8.23e-01 -0.0189 0.0846 0.421 CD4_TEM L2
ENSG00000059758 CDK17 412510 sc-eQTL 3.07e-01 0.0472 0.0461 0.421 CD8_CTL L2
ENSG00000111144 LTA4H 769470 sc-eQTL 2.03e-01 -0.106 0.0832 0.421 CD8_CTL L2
ENSG00000111145 ELK3 618615 sc-eQTL 1.39e-01 -0.112 0.0756 0.421 CD8_CTL L2
ENSG00000139343 SNRPF 954062 sc-eQTL 4.96e-01 -0.0476 0.0698 0.421 CD8_CTL L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 7.62e-01 0.0238 0.0784 0.421 CD8_CTL L2
ENSG00000059758 CDK17 412510 sc-eQTL 6.86e-01 0.0223 0.0553 0.421 CD8_Naive L2
ENSG00000111144 LTA4H 769470 sc-eQTL 2.17e-02 -0.151 0.0654 0.421 CD8_Naive L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.28e-01 -0.034 0.07 0.421 CD8_Naive L2
ENSG00000139343 SNRPF 954062 sc-eQTL 5.46e-01 -0.038 0.0629 0.421 CD8_Naive L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 5.06e-01 -0.0499 0.0749 0.421 CD8_Naive L2
ENSG00000059758 CDK17 412510 sc-eQTL 3.82e-01 0.0525 0.0599 0.433 CD8_TCM L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.94e-02 0.166 0.0874 0.433 CD8_TCM L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.59e-01 0.033 0.0747 0.433 CD8_TCM L2
ENSG00000139343 SNRPF 954062 sc-eQTL 6.36e-01 -0.0408 0.086 0.433 CD8_TCM L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 2.63e-01 0.0943 0.084 0.433 CD8_TCM L2
ENSG00000059758 CDK17 412510 sc-eQTL 2.15e-02 0.171 0.0737 0.411 CD8_TEM L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.21e-01 -0.0587 0.0913 0.411 CD8_TEM L2
ENSG00000111145 ELK3 618615 sc-eQTL 2.79e-02 -0.197 0.0888 0.411 CD8_TEM L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.88e-01 -0.0887 0.0833 0.411 CD8_TEM L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 5.19e-01 -0.0585 0.0906 0.411 CD8_TEM L2
ENSG00000059758 CDK17 412510 sc-eQTL 1.82e-01 0.0665 0.0496 0.42 MAIT L2
ENSG00000111144 LTA4H 769470 sc-eQTL 3.74e-01 -0.0685 0.0769 0.42 MAIT L2
ENSG00000111145 ELK3 618615 sc-eQTL 8.94e-01 -0.00861 0.0646 0.42 MAIT L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.78e-01 0.0813 0.0747 0.42 MAIT L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 3.17e-01 -0.0842 0.0839 0.42 MAIT L2
ENSG00000188596 CFAP54 323419 sc-eQTL 3.34e-01 -0.0805 0.0832 0.42 MAIT L2
ENSG00000059758 CDK17 412510 sc-eQTL 6.13e-01 0.0271 0.0535 0.416 NK_CD56bright L2
ENSG00000111144 LTA4H 769470 sc-eQTL 4.33e-02 -0.159 0.0784 0.416 NK_CD56bright L2
ENSG00000111145 ELK3 618615 sc-eQTL 3.37e-01 0.0806 0.0838 0.416 NK_CD56bright L2
ENSG00000139343 SNRPF 954062 sc-eQTL 8.33e-01 0.0186 0.0879 0.416 NK_CD56bright L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 2.65e-01 0.0988 0.0884 0.416 NK_CD56bright L2
ENSG00000059758 CDK17 412510 sc-eQTL 6.11e-01 -0.0232 0.0455 0.42 NK_CD56dim L2
ENSG00000111144 LTA4H 769470 sc-eQTL 4.31e-01 -0.0649 0.0821 0.42 NK_CD56dim L2
ENSG00000111145 ELK3 618615 sc-eQTL 9.18e-01 -0.00753 0.0728 0.42 NK_CD56dim L2
ENSG00000139343 SNRPF 954062 sc-eQTL 5.20e-01 -0.0446 0.0692 0.42 NK_CD56dim L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 5.70e-01 0.0454 0.0798 0.42 NK_CD56dim L2
ENSG00000059758 CDK17 412510 sc-eQTL 2.59e-01 -0.0798 0.0704 0.422 NK_HLA L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.45e-01 -0.0561 0.0926 0.422 NK_HLA L2
ENSG00000111145 ELK3 618615 sc-eQTL 8.03e-01 0.0215 0.086 0.422 NK_HLA L2
ENSG00000139343 SNRPF 954062 sc-eQTL 1.82e-01 0.119 0.0892 0.422 NK_HLA L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.82e-01 0.113 0.0844 0.422 NK_HLA L2
ENSG00000059758 CDK17 412510 sc-eQTL 9.80e-01 0.00124 0.0484 0.42 NK_cytokine L2
ENSG00000111144 LTA4H 769470 sc-eQTL 1.35e-01 -0.122 0.0814 0.42 NK_cytokine L2
ENSG00000111145 ELK3 618615 sc-eQTL 3.93e-01 -0.067 0.0782 0.42 NK_cytokine L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.14e-01 -0.0824 0.0661 0.42 NK_cytokine L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 9.05e-02 0.139 0.0815 0.42 NK_cytokine L2
ENSG00000059758 CDK17 412510 sc-eQTL 2.62e-01 0.107 0.0953 0.381 PB L2
ENSG00000111144 LTA4H 769470 sc-eQTL 7.98e-01 -0.0217 0.0845 0.381 PB L2
ENSG00000111145 ELK3 618615 sc-eQTL 3.92e-01 0.0927 0.108 0.381 PB L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.02e-02 0.243 0.103 0.381 PB L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 7.17e-01 -0.0457 0.126 0.381 PB L2
ENSG00000059758 CDK17 412510 sc-eQTL 5.61e-01 0.0317 0.0545 0.42 Pro_T L2
ENSG00000111144 LTA4H 769470 sc-eQTL 5.28e-01 -0.0454 0.0719 0.42 Pro_T L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.88e-01 -0.0351 0.0871 0.42 Pro_T L2
ENSG00000139343 SNRPF 954062 sc-eQTL 7.06e-01 0.0207 0.0549 0.42 Pro_T L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 4.97e-01 0.0542 0.0797 0.42 Pro_T L2
ENSG00000188596 CFAP54 323419 sc-eQTL 8.45e-01 0.0126 0.0645 0.42 Pro_T L2
ENSG00000059758 CDK17 412510 sc-eQTL 1.86e-01 -0.0791 0.0597 0.421 Treg L2
ENSG00000111144 LTA4H 769470 sc-eQTL 7.19e-01 0.0274 0.0759 0.421 Treg L2
ENSG00000111145 ELK3 618615 sc-eQTL 8.90e-01 0.00949 0.0688 0.421 Treg L2
ENSG00000139343 SNRPF 954062 sc-eQTL 7.70e-01 0.0234 0.0796 0.421 Treg L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 3.11e-02 -0.191 0.0879 0.421 Treg L2
ENSG00000059758 CDK17 412510 sc-eQTL 6.46e-01 0.0348 0.0756 0.402 cDC L2
ENSG00000084110 HAL 816625 sc-eQTL 8.84e-01 -0.0115 0.0786 0.402 cDC L2
ENSG00000111144 LTA4H 769470 sc-eQTL 4.43e-01 0.0517 0.0673 0.402 cDC L2
ENSG00000111145 ELK3 618615 sc-eQTL 3.01e-01 -0.0921 0.0887 0.402 cDC L2
ENSG00000139343 SNRPF 954062 sc-eQTL 7.13e-01 -0.0274 0.0744 0.402 cDC L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 9.78e-01 0.00248 0.0907 0.402 cDC L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 6.48e-01 0.0349 0.0765 0.402 cDC L2
ENSG00000059758 CDK17 412510 sc-eQTL 9.39e-01 0.00497 0.0651 0.421 cMono_IL1B L2
ENSG00000084110 HAL 816625 sc-eQTL 8.50e-01 0.0135 0.071 0.421 cMono_IL1B L2
ENSG00000111144 LTA4H 769470 sc-eQTL 3.12e-01 0.0775 0.0765 0.421 cMono_IL1B L2
ENSG00000111145 ELK3 618615 sc-eQTL 7.29e-01 -0.0205 0.0591 0.421 cMono_IL1B L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.72e-01 0.067 0.0608 0.421 cMono_IL1B L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 9.27e-05 0.323 0.0809 0.421 cMono_IL1B L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 4.43e-01 0.0601 0.0782 0.421 cMono_IL1B L2
ENSG00000059758 CDK17 412510 sc-eQTL 7.59e-01 0.0226 0.0737 0.421 cMono_S100A L2
ENSG00000084110 HAL 816625 sc-eQTL 4.39e-01 0.0641 0.0826 0.421 cMono_S100A L2
ENSG00000111144 LTA4H 769470 sc-eQTL 1.72e-01 0.113 0.0823 0.421 cMono_S100A L2
ENSG00000111145 ELK3 618615 sc-eQTL 7.01e-01 0.0259 0.0673 0.421 cMono_S100A L2
ENSG00000139343 SNRPF 954062 sc-eQTL 5.17e-01 0.0432 0.0665 0.421 cMono_S100A L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 7.25e-02 0.161 0.0891 0.421 cMono_S100A L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 6.44e-01 -0.0391 0.0845 0.421 cMono_S100A L2
ENSG00000059758 CDK17 412510 sc-eQTL 8.09e-01 -0.0174 0.0717 0.427 gdT L2
ENSG00000111144 LTA4H 769470 sc-eQTL 6.52e-01 -0.0485 0.107 0.427 gdT L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.40e-01 -0.0465 0.0992 0.427 gdT L2
ENSG00000139343 SNRPF 954062 sc-eQTL 7.69e-01 0.0282 0.0958 0.427 gdT L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 6.71e-01 -0.045 0.106 0.427 gdT L2
ENSG00000188596 CFAP54 323419 sc-eQTL 5.14e-01 -0.0606 0.0926 0.427 gdT L2
ENSG00000059758 CDK17 412510 sc-eQTL 6.03e-01 -0.0431 0.0828 0.42 intMono L2
ENSG00000084110 HAL 816625 sc-eQTL 1.80e-01 -0.112 0.0834 0.42 intMono L2
ENSG00000111144 LTA4H 769470 sc-eQTL 7.01e-01 0.033 0.0859 0.42 intMono L2
ENSG00000111145 ELK3 618615 sc-eQTL 6.70e-01 -0.0326 0.0765 0.42 intMono L2
ENSG00000139343 SNRPF 954062 sc-eQTL 7.17e-03 0.218 0.0803 0.42 intMono L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 3.42e-02 0.179 0.084 0.42 intMono L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 6.29e-01 -0.0413 0.0854 0.42 intMono L2
ENSG00000059758 CDK17 412510 sc-eQTL 9.01e-01 0.00843 0.0674 0.416 ncMono L2
ENSG00000084110 HAL 816625 sc-eQTL 9.19e-01 0.00771 0.0753 0.416 ncMono L2
ENSG00000111144 LTA4H 769470 sc-eQTL 8.35e-01 0.0175 0.0839 0.416 ncMono L2
ENSG00000111145 ELK3 618615 sc-eQTL 8.70e-01 0.0118 0.072 0.416 ncMono L2
ENSG00000139343 SNRPF 954062 sc-eQTL 1.48e-02 -0.178 0.0725 0.416 ncMono L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 4.42e-03 0.22 0.0766 0.416 ncMono L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 5.21e-01 -0.0573 0.0891 0.416 ncMono L2
ENSG00000059758 CDK17 412510 sc-eQTL 2.98e-01 0.092 0.0882 0.418 pDC L2
ENSG00000084110 HAL 816625 sc-eQTL 9.68e-01 -0.00301 0.0747 0.418 pDC L2
ENSG00000111144 LTA4H 769470 sc-eQTL 1.07e-01 0.135 0.0829 0.418 pDC L2
ENSG00000111145 ELK3 618615 sc-eQTL 3.56e-01 0.0944 0.102 0.418 pDC L2
ENSG00000139343 SNRPF 954062 sc-eQTL 2.83e-01 -0.0958 0.0889 0.418 pDC L2
ENSG00000139350 NEDD1 -94233 sc-eQTL 9.71e-01 -0.00359 0.0985 0.418 pDC L2
ENSG00000257715 AC007298.1 787667 sc-eQTL 3.32e-01 0.0819 0.0842 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 412510 sc-eQTL 1.93e-03 0.176 0.0561 0.421 B_Memory LOneK1K
ENSG00000111144 LTA4H 769470 sc-eQTL 7.46e-01 0.0194 0.0596 0.421 B_Memory LOneK1K
ENSG00000111145 ELK3 618615 sc-eQTL 9.44e-01 -0.0048 0.0681 0.421 B_Memory LOneK1K
ENSG00000139343 SNRPF 954062 sc-eQTL 8.23e-01 0.0148 0.066 0.421 B_Memory LOneK1K
ENSG00000139350 NEDD1 -94233 sc-eQTL 3.43e-01 -0.0822 0.0864 0.421 B_Memory LOneK1K
ENSG00000059758 CDK17 412510 sc-eQTL 2.86e-02 0.108 0.0492 0.421 B_Naive LOneK1K
ENSG00000111144 LTA4H 769470 sc-eQTL 7.32e-01 -0.0191 0.0558 0.421 B_Naive LOneK1K
ENSG00000111145 ELK3 618615 sc-eQTL 1.47e-01 0.092 0.0632 0.421 B_Naive LOneK1K
ENSG00000139343 SNRPF 954062 sc-eQTL 7.24e-01 0.0226 0.064 0.421 B_Naive LOneK1K
ENSG00000139350 NEDD1 -94233 sc-eQTL 4.19e-01 0.0685 0.0846 0.421 B_Naive LOneK1K
ENSG00000059758 CDK17 412510 sc-eQTL 6.89e-01 0.0235 0.0586 0.421 CD14_Mono LOneK1K
ENSG00000084110 HAL 816625 sc-eQTL 3.46e-01 0.0669 0.0709 0.421 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 769470 sc-eQTL 3.07e-01 0.0796 0.0778 0.421 CD14_Mono LOneK1K
ENSG00000111145 ELK3 618615 sc-eQTL 7.68e-01 -0.0166 0.0563 0.421 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 954062 sc-eQTL 5.01e-01 0.0367 0.0543 0.421 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -94233 sc-eQTL 6.92e-04 0.286 0.083 0.421 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 787667 sc-eQTL 8.22e-01 -0.0178 0.079 0.421 CD14_Mono LOneK1K
ENSG00000059758 CDK17 412510 sc-eQTL 9.08e-01 0.00701 0.0607 0.42 CD16_Mono LOneK1K
ENSG00000084110 HAL 816625 sc-eQTL 9.63e-01 -0.00332 0.0717 0.42 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 769470 sc-eQTL 5.05e-01 0.0531 0.0795 0.42 CD16_Mono LOneK1K
ENSG00000111145 ELK3 618615 sc-eQTL 7.12e-01 0.0218 0.0588 0.42 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 954062 sc-eQTL 7.74e-01 0.0174 0.0607 0.42 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -94233 sc-eQTL 2.96e-04 0.278 0.0754 0.42 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 787667 sc-eQTL 4.05e-01 -0.0686 0.0823 0.42 CD16_Mono LOneK1K
ENSG00000059758 CDK17 412510 sc-eQTL 8.83e-01 -0.00625 0.0425 0.42 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 769470 sc-eQTL 3.50e-01 -0.0691 0.0738 0.42 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 618615 sc-eQTL 9.07e-01 0.00788 0.0677 0.42 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 954062 sc-eQTL 6.26e-01 -0.0282 0.0579 0.42 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -94233 sc-eQTL 1.77e-01 0.0974 0.0719 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -94233 eQTL 1.04e-75 0.392 0.0194 0.0 0.0 0.418

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -94233 4.48e-06 4.91e-06 8.34e-07 2.68e-06 1.63e-06 1.71e-06 5.01e-06 1.04e-06 5.08e-06 2.45e-06 5.21e-06 3.31e-06 7.44e-06 2.4e-06 1.35e-06 3.83e-06 1.81e-06 3.79e-06 1.55e-06 1.15e-06 3.07e-06 4.97e-06 4.59e-06 1.76e-06 6.48e-06 1.96e-06 2.53e-06 1.73e-06 4.46e-06 4.61e-06 2.75e-06 3.85e-07 6.68e-07 2.15e-06 2.15e-06 1.17e-06 1.08e-06 4.08e-07 9e-07 5.62e-07 8.36e-07 5.76e-06 3.83e-07 1.68e-07 7.75e-07 9.16e-07 1.03e-06 5.83e-07 4.68e-07
ENSG00000257715 \N 787667 2.95e-07 1.33e-07 5.82e-08 1.89e-07 9.8e-08 8.45e-08 1.9e-07 5.62e-08 1.54e-07 7.6e-08 1.62e-07 1.19e-07 1.87e-07 7.95e-08 5.72e-08 7.98e-08 4.31e-08 1.64e-07 6.92e-08 4.89e-08 1.25e-07 1.39e-07 1.58e-07 2.83e-08 1.72e-07 1.31e-07 1.17e-07 1.04e-07 1.34e-07 1e-07 1.06e-07 3.1e-08 3.43e-08 9.52e-08 3.63e-08 2.69e-08 5.7e-08 8.63e-08 6.43e-08 4.19e-08 4.92e-08 1.48e-07 5.21e-08 1.35e-08 3.42e-08 1.89e-08 1.15e-07 1.88e-09 4.99e-08