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Genes within 1Mb (chr12:96808662:G:A):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 408182 sc-eQTL 1.10e-04 0.17 0.043 0.421 B L1
ENSG00000111144 LTA4H 765142 sc-eQTL 5.76e-01 -0.031 0.0553 0.421 B L1
ENSG00000111145 ELK3 614287 sc-eQTL 5.48e-01 0.0355 0.0589 0.421 B L1
ENSG00000139343 SNRPF 949734 sc-eQTL 3.88e-01 0.0462 0.0534 0.421 B L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 8.43e-01 0.0155 0.0781 0.421 B L1
ENSG00000059758 CDK17 408182 sc-eQTL 4.75e-01 0.026 0.0364 0.421 CD4T L1
ENSG00000111144 LTA4H 765142 sc-eQTL 3.37e-01 0.048 0.0499 0.421 CD4T L1
ENSG00000111145 ELK3 614287 sc-eQTL 9.69e-01 -0.00213 0.0542 0.421 CD4T L1
ENSG00000139343 SNRPF 949734 sc-eQTL 2.22e-01 0.0578 0.0472 0.421 CD4T L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.94e-01 -0.0756 0.0581 0.421 CD4T L1
ENSG00000059758 CDK17 408182 sc-eQTL 6.50e-02 0.0686 0.037 0.421 CD8T L1
ENSG00000111144 LTA4H 765142 sc-eQTL 1.83e-01 -0.0533 0.0398 0.421 CD8T L1
ENSG00000111145 ELK3 614287 sc-eQTL 9.08e-01 -0.00697 0.0602 0.421 CD8T L1
ENSG00000139343 SNRPF 949734 sc-eQTL 3.46e-01 -0.0465 0.0492 0.421 CD8T L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 6.76e-01 0.0274 0.0656 0.421 CD8T L1
ENSG00000059758 CDK17 408182 sc-eQTL 5.67e-02 0.137 0.0717 0.419 DC L1
ENSG00000084110 HAL 812297 sc-eQTL 6.33e-01 0.0394 0.0823 0.419 DC L1
ENSG00000111144 LTA4H 765142 sc-eQTL 2.66e-02 0.149 0.0665 0.419 DC L1
ENSG00000111145 ELK3 614287 sc-eQTL 8.23e-01 0.0185 0.0825 0.419 DC L1
ENSG00000139343 SNRPF 949734 sc-eQTL 3.62e-01 -0.0625 0.0685 0.419 DC L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 5.72e-01 -0.0498 0.088 0.419 DC L1
ENSG00000257715 AC007298.1 783339 sc-eQTL 3.60e-01 0.0728 0.0794 0.419 DC L1
ENSG00000059758 CDK17 408182 sc-eQTL 6.61e-01 0.0247 0.0563 0.421 Mono L1
ENSG00000084110 HAL 812297 sc-eQTL 7.09e-01 0.0265 0.0709 0.421 Mono L1
ENSG00000111144 LTA4H 765142 sc-eQTL 3.90e-01 0.0688 0.0799 0.421 Mono L1
ENSG00000111145 ELK3 614287 sc-eQTL 8.77e-01 -0.00834 0.0538 0.421 Mono L1
ENSG00000139343 SNRPF 949734 sc-eQTL 6.54e-01 0.0227 0.0507 0.421 Mono L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.45e-06 0.365 0.0737 0.421 Mono L1
ENSG00000257715 AC007298.1 783339 sc-eQTL 5.17e-01 -0.0489 0.0754 0.421 Mono L1
ENSG00000059758 CDK17 408182 sc-eQTL 7.91e-01 -0.0111 0.042 0.423 NK L1
ENSG00000111144 LTA4H 765142 sc-eQTL 1.98e-01 -0.0916 0.071 0.423 NK L1
ENSG00000111145 ELK3 614287 sc-eQTL 9.96e-01 -0.000351 0.0676 0.423 NK L1
ENSG00000139343 SNRPF 949734 sc-eQTL 7.67e-01 -0.0166 0.056 0.423 NK L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.59e-01 0.0999 0.0706 0.423 NK L1
ENSG00000059758 CDK17 408182 sc-eQTL 6.09e-01 0.0177 0.0346 0.421 Other_T L1
ENSG00000111144 LTA4H 765142 sc-eQTL 6.56e-01 -0.0322 0.0723 0.421 Other_T L1
ENSG00000111145 ELK3 614287 sc-eQTL 6.67e-01 -0.0243 0.0564 0.421 Other_T L1
ENSG00000139343 SNRPF 949734 sc-eQTL 9.56e-01 0.0029 0.0525 0.421 Other_T L1
ENSG00000139350 NEDD1 -98561 sc-eQTL 9.52e-01 0.00485 0.0799 0.421 Other_T L1
ENSG00000188596 CFAP54 319091 sc-eQTL 3.21e-02 -0.177 0.0819 0.421 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 408182 sc-eQTL 2.69e-01 0.089 0.0803 0.408 B_Activated L2
ENSG00000111144 LTA4H 765142 sc-eQTL 9.13e-01 -0.00999 0.0912 0.408 B_Activated L2
ENSG00000111145 ELK3 614287 sc-eQTL 9.67e-01 -0.00401 0.0966 0.408 B_Activated L2
ENSG00000139343 SNRPF 949734 sc-eQTL 6.29e-01 -0.044 0.091 0.408 B_Activated L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 7.83e-01 -0.0263 0.0952 0.408 B_Activated L2
ENSG00000059758 CDK17 408182 sc-eQTL 1.72e-02 0.163 0.0678 0.421 B_Intermediate L2
ENSG00000111144 LTA4H 765142 sc-eQTL 9.00e-01 0.00841 0.0666 0.421 B_Intermediate L2
ENSG00000111145 ELK3 614287 sc-eQTL 2.79e-01 0.0812 0.0748 0.421 B_Intermediate L2
ENSG00000139343 SNRPF 949734 sc-eQTL 5.67e-01 -0.0429 0.0747 0.421 B_Intermediate L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.95e-01 0.113 0.0872 0.421 B_Intermediate L2
ENSG00000059758 CDK17 408182 sc-eQTL 1.06e-01 0.106 0.0655 0.418 B_Memory L2
ENSG00000111144 LTA4H 765142 sc-eQTL 2.18e-01 0.0936 0.0758 0.418 B_Memory L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.96e-01 -0.0293 0.0748 0.418 B_Memory L2
ENSG00000139343 SNRPF 949734 sc-eQTL 8.72e-01 -0.0128 0.0793 0.418 B_Memory L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.00e-01 -0.144 0.0871 0.418 B_Memory L2
ENSG00000059758 CDK17 408182 sc-eQTL 4.11e-03 0.157 0.0542 0.421 B_Naive1 L2
ENSG00000111144 LTA4H 765142 sc-eQTL 8.37e-01 0.0119 0.0578 0.421 B_Naive1 L2
ENSG00000111145 ELK3 614287 sc-eQTL 9.39e-02 0.114 0.0679 0.421 B_Naive1 L2
ENSG00000139343 SNRPF 949734 sc-eQTL 5.62e-01 -0.0385 0.0664 0.421 B_Naive1 L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 8.99e-01 -0.0108 0.0853 0.421 B_Naive1 L2
ENSG00000059758 CDK17 408182 sc-eQTL 7.93e-01 0.0182 0.0694 0.421 B_Naive2 L2
ENSG00000111144 LTA4H 765142 sc-eQTL 8.27e-01 -0.0144 0.0657 0.421 B_Naive2 L2
ENSG00000111145 ELK3 614287 sc-eQTL 9.99e-01 0.00012 0.0775 0.421 B_Naive2 L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.96e-01 0.0804 0.0767 0.421 B_Naive2 L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 4.10e-01 0.0755 0.0914 0.421 B_Naive2 L2
ENSG00000059758 CDK17 408182 sc-eQTL 5.09e-01 0.0419 0.0634 0.42 CD4_CTL L2
ENSG00000111144 LTA4H 765142 sc-eQTL 6.49e-01 0.0407 0.0894 0.42 CD4_CTL L2
ENSG00000111145 ELK3 614287 sc-eQTL 7.01e-01 0.0348 0.0905 0.42 CD4_CTL L2
ENSG00000139343 SNRPF 949734 sc-eQTL 9.56e-01 -0.00434 0.0787 0.42 CD4_CTL L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 5.63e-01 0.0526 0.091 0.42 CD4_CTL L2
ENSG00000059758 CDK17 408182 sc-eQTL 3.00e-01 0.0413 0.0397 0.421 CD4_Naive L2
ENSG00000111144 LTA4H 765142 sc-eQTL 4.89e-01 0.0399 0.0576 0.421 CD4_Naive L2
ENSG00000111145 ELK3 614287 sc-eQTL 5.82e-01 -0.0317 0.0576 0.421 CD4_Naive L2
ENSG00000139343 SNRPF 949734 sc-eQTL 4.43e-01 0.0393 0.0511 0.421 CD4_Naive L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 6.42e-01 -0.0293 0.063 0.421 CD4_Naive L2
ENSG00000059758 CDK17 408182 sc-eQTL 4.07e-01 0.0325 0.0391 0.421 CD4_TCM L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.27e-01 0.042 0.0664 0.421 CD4_TCM L2
ENSG00000111145 ELK3 614287 sc-eQTL 4.50e-01 -0.0494 0.0653 0.421 CD4_TCM L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.42e-01 0.0627 0.0535 0.421 CD4_TCM L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 2.91e-01 -0.0773 0.0731 0.421 CD4_TCM L2
ENSG00000059758 CDK17 408182 sc-eQTL 1.05e-01 0.0767 0.0472 0.421 CD4_TEM L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.55e-01 0.0434 0.0733 0.421 CD4_TEM L2
ENSG00000111145 ELK3 614287 sc-eQTL 9.76e-01 -0.00207 0.0681 0.421 CD4_TEM L2
ENSG00000139343 SNRPF 949734 sc-eQTL 3.78e-01 0.0629 0.0712 0.421 CD4_TEM L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 8.23e-01 -0.0189 0.0846 0.421 CD4_TEM L2
ENSG00000059758 CDK17 408182 sc-eQTL 3.07e-01 0.0472 0.0461 0.421 CD8_CTL L2
ENSG00000111144 LTA4H 765142 sc-eQTL 2.03e-01 -0.106 0.0832 0.421 CD8_CTL L2
ENSG00000111145 ELK3 614287 sc-eQTL 1.39e-01 -0.112 0.0756 0.421 CD8_CTL L2
ENSG00000139343 SNRPF 949734 sc-eQTL 4.96e-01 -0.0476 0.0698 0.421 CD8_CTL L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 7.62e-01 0.0238 0.0784 0.421 CD8_CTL L2
ENSG00000059758 CDK17 408182 sc-eQTL 6.86e-01 0.0223 0.0553 0.421 CD8_Naive L2
ENSG00000111144 LTA4H 765142 sc-eQTL 2.17e-02 -0.151 0.0654 0.421 CD8_Naive L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.28e-01 -0.034 0.07 0.421 CD8_Naive L2
ENSG00000139343 SNRPF 949734 sc-eQTL 5.46e-01 -0.038 0.0629 0.421 CD8_Naive L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 5.06e-01 -0.0499 0.0749 0.421 CD8_Naive L2
ENSG00000059758 CDK17 408182 sc-eQTL 3.82e-01 0.0525 0.0599 0.433 CD8_TCM L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.94e-02 0.166 0.0874 0.433 CD8_TCM L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.59e-01 0.033 0.0747 0.433 CD8_TCM L2
ENSG00000139343 SNRPF 949734 sc-eQTL 6.36e-01 -0.0408 0.086 0.433 CD8_TCM L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 2.63e-01 0.0943 0.084 0.433 CD8_TCM L2
ENSG00000059758 CDK17 408182 sc-eQTL 2.15e-02 0.171 0.0737 0.411 CD8_TEM L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.21e-01 -0.0587 0.0913 0.411 CD8_TEM L2
ENSG00000111145 ELK3 614287 sc-eQTL 2.79e-02 -0.197 0.0888 0.411 CD8_TEM L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.88e-01 -0.0887 0.0833 0.411 CD8_TEM L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 5.19e-01 -0.0585 0.0906 0.411 CD8_TEM L2
ENSG00000059758 CDK17 408182 sc-eQTL 1.82e-01 0.0665 0.0496 0.42 MAIT L2
ENSG00000111144 LTA4H 765142 sc-eQTL 3.74e-01 -0.0685 0.0769 0.42 MAIT L2
ENSG00000111145 ELK3 614287 sc-eQTL 8.94e-01 -0.00861 0.0646 0.42 MAIT L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.78e-01 0.0813 0.0747 0.42 MAIT L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 3.17e-01 -0.0842 0.0839 0.42 MAIT L2
ENSG00000188596 CFAP54 319091 sc-eQTL 3.34e-01 -0.0805 0.0832 0.42 MAIT L2
ENSG00000059758 CDK17 408182 sc-eQTL 6.13e-01 0.0271 0.0535 0.416 NK_CD56bright L2
ENSG00000111144 LTA4H 765142 sc-eQTL 4.33e-02 -0.159 0.0784 0.416 NK_CD56bright L2
ENSG00000111145 ELK3 614287 sc-eQTL 3.37e-01 0.0806 0.0838 0.416 NK_CD56bright L2
ENSG00000139343 SNRPF 949734 sc-eQTL 8.33e-01 0.0186 0.0879 0.416 NK_CD56bright L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 2.65e-01 0.0988 0.0884 0.416 NK_CD56bright L2
ENSG00000059758 CDK17 408182 sc-eQTL 6.11e-01 -0.0232 0.0455 0.42 NK_CD56dim L2
ENSG00000111144 LTA4H 765142 sc-eQTL 4.31e-01 -0.0649 0.0821 0.42 NK_CD56dim L2
ENSG00000111145 ELK3 614287 sc-eQTL 9.18e-01 -0.00753 0.0728 0.42 NK_CD56dim L2
ENSG00000139343 SNRPF 949734 sc-eQTL 5.20e-01 -0.0446 0.0692 0.42 NK_CD56dim L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 5.70e-01 0.0454 0.0798 0.42 NK_CD56dim L2
ENSG00000059758 CDK17 408182 sc-eQTL 2.59e-01 -0.0798 0.0704 0.422 NK_HLA L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.45e-01 -0.0561 0.0926 0.422 NK_HLA L2
ENSG00000111145 ELK3 614287 sc-eQTL 8.03e-01 0.0215 0.086 0.422 NK_HLA L2
ENSG00000139343 SNRPF 949734 sc-eQTL 1.82e-01 0.119 0.0892 0.422 NK_HLA L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.82e-01 0.113 0.0844 0.422 NK_HLA L2
ENSG00000059758 CDK17 408182 sc-eQTL 9.80e-01 0.00124 0.0484 0.42 NK_cytokine L2
ENSG00000111144 LTA4H 765142 sc-eQTL 1.35e-01 -0.122 0.0814 0.42 NK_cytokine L2
ENSG00000111145 ELK3 614287 sc-eQTL 3.93e-01 -0.067 0.0782 0.42 NK_cytokine L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.14e-01 -0.0824 0.0661 0.42 NK_cytokine L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 9.05e-02 0.139 0.0815 0.42 NK_cytokine L2
ENSG00000059758 CDK17 408182 sc-eQTL 2.62e-01 0.107 0.0953 0.381 PB L2
ENSG00000111144 LTA4H 765142 sc-eQTL 7.98e-01 -0.0217 0.0845 0.381 PB L2
ENSG00000111145 ELK3 614287 sc-eQTL 3.92e-01 0.0927 0.108 0.381 PB L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.02e-02 0.243 0.103 0.381 PB L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 7.17e-01 -0.0457 0.126 0.381 PB L2
ENSG00000059758 CDK17 408182 sc-eQTL 5.61e-01 0.0317 0.0545 0.42 Pro_T L2
ENSG00000111144 LTA4H 765142 sc-eQTL 5.28e-01 -0.0454 0.0719 0.42 Pro_T L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.88e-01 -0.0351 0.0871 0.42 Pro_T L2
ENSG00000139343 SNRPF 949734 sc-eQTL 7.06e-01 0.0207 0.0549 0.42 Pro_T L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 4.97e-01 0.0542 0.0797 0.42 Pro_T L2
ENSG00000188596 CFAP54 319091 sc-eQTL 8.45e-01 0.0126 0.0645 0.42 Pro_T L2
ENSG00000059758 CDK17 408182 sc-eQTL 1.86e-01 -0.0791 0.0597 0.421 Treg L2
ENSG00000111144 LTA4H 765142 sc-eQTL 7.19e-01 0.0274 0.0759 0.421 Treg L2
ENSG00000111145 ELK3 614287 sc-eQTL 8.90e-01 0.00949 0.0688 0.421 Treg L2
ENSG00000139343 SNRPF 949734 sc-eQTL 7.70e-01 0.0234 0.0796 0.421 Treg L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 3.11e-02 -0.191 0.0879 0.421 Treg L2
ENSG00000059758 CDK17 408182 sc-eQTL 6.46e-01 0.0348 0.0756 0.402 cDC L2
ENSG00000084110 HAL 812297 sc-eQTL 8.84e-01 -0.0115 0.0786 0.402 cDC L2
ENSG00000111144 LTA4H 765142 sc-eQTL 4.43e-01 0.0517 0.0673 0.402 cDC L2
ENSG00000111145 ELK3 614287 sc-eQTL 3.01e-01 -0.0921 0.0887 0.402 cDC L2
ENSG00000139343 SNRPF 949734 sc-eQTL 7.13e-01 -0.0274 0.0744 0.402 cDC L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 9.78e-01 0.00248 0.0907 0.402 cDC L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 6.48e-01 0.0349 0.0765 0.402 cDC L2
ENSG00000059758 CDK17 408182 sc-eQTL 9.39e-01 0.00497 0.0651 0.421 cMono_IL1B L2
ENSG00000084110 HAL 812297 sc-eQTL 8.50e-01 0.0135 0.071 0.421 cMono_IL1B L2
ENSG00000111144 LTA4H 765142 sc-eQTL 3.12e-01 0.0775 0.0765 0.421 cMono_IL1B L2
ENSG00000111145 ELK3 614287 sc-eQTL 7.29e-01 -0.0205 0.0591 0.421 cMono_IL1B L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.72e-01 0.067 0.0608 0.421 cMono_IL1B L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 9.27e-05 0.323 0.0809 0.421 cMono_IL1B L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 4.43e-01 0.0601 0.0782 0.421 cMono_IL1B L2
ENSG00000059758 CDK17 408182 sc-eQTL 7.59e-01 0.0226 0.0737 0.421 cMono_S100A L2
ENSG00000084110 HAL 812297 sc-eQTL 4.39e-01 0.0641 0.0826 0.421 cMono_S100A L2
ENSG00000111144 LTA4H 765142 sc-eQTL 1.72e-01 0.113 0.0823 0.421 cMono_S100A L2
ENSG00000111145 ELK3 614287 sc-eQTL 7.01e-01 0.0259 0.0673 0.421 cMono_S100A L2
ENSG00000139343 SNRPF 949734 sc-eQTL 5.17e-01 0.0432 0.0665 0.421 cMono_S100A L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 7.25e-02 0.161 0.0891 0.421 cMono_S100A L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 6.44e-01 -0.0391 0.0845 0.421 cMono_S100A L2
ENSG00000059758 CDK17 408182 sc-eQTL 8.09e-01 -0.0174 0.0717 0.427 gdT L2
ENSG00000111144 LTA4H 765142 sc-eQTL 6.52e-01 -0.0485 0.107 0.427 gdT L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.40e-01 -0.0465 0.0992 0.427 gdT L2
ENSG00000139343 SNRPF 949734 sc-eQTL 7.69e-01 0.0282 0.0958 0.427 gdT L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 6.71e-01 -0.045 0.106 0.427 gdT L2
ENSG00000188596 CFAP54 319091 sc-eQTL 5.14e-01 -0.0606 0.0926 0.427 gdT L2
ENSG00000059758 CDK17 408182 sc-eQTL 6.03e-01 -0.0431 0.0828 0.42 intMono L2
ENSG00000084110 HAL 812297 sc-eQTL 1.80e-01 -0.112 0.0834 0.42 intMono L2
ENSG00000111144 LTA4H 765142 sc-eQTL 7.01e-01 0.033 0.0859 0.42 intMono L2
ENSG00000111145 ELK3 614287 sc-eQTL 6.70e-01 -0.0326 0.0765 0.42 intMono L2
ENSG00000139343 SNRPF 949734 sc-eQTL 7.17e-03 0.218 0.0803 0.42 intMono L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 3.42e-02 0.179 0.084 0.42 intMono L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 6.29e-01 -0.0413 0.0854 0.42 intMono L2
ENSG00000059758 CDK17 408182 sc-eQTL 9.01e-01 0.00843 0.0674 0.416 ncMono L2
ENSG00000084110 HAL 812297 sc-eQTL 9.19e-01 0.00771 0.0753 0.416 ncMono L2
ENSG00000111144 LTA4H 765142 sc-eQTL 8.35e-01 0.0175 0.0839 0.416 ncMono L2
ENSG00000111145 ELK3 614287 sc-eQTL 8.70e-01 0.0118 0.072 0.416 ncMono L2
ENSG00000139343 SNRPF 949734 sc-eQTL 1.48e-02 -0.178 0.0725 0.416 ncMono L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 4.42e-03 0.22 0.0766 0.416 ncMono L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 5.21e-01 -0.0573 0.0891 0.416 ncMono L2
ENSG00000059758 CDK17 408182 sc-eQTL 2.98e-01 0.092 0.0882 0.418 pDC L2
ENSG00000084110 HAL 812297 sc-eQTL 9.68e-01 -0.00301 0.0747 0.418 pDC L2
ENSG00000111144 LTA4H 765142 sc-eQTL 1.07e-01 0.135 0.0829 0.418 pDC L2
ENSG00000111145 ELK3 614287 sc-eQTL 3.56e-01 0.0944 0.102 0.418 pDC L2
ENSG00000139343 SNRPF 949734 sc-eQTL 2.83e-01 -0.0958 0.0889 0.418 pDC L2
ENSG00000139350 NEDD1 -98561 sc-eQTL 9.71e-01 -0.00359 0.0985 0.418 pDC L2
ENSG00000257715 AC007298.1 783339 sc-eQTL 3.32e-01 0.0819 0.0842 0.418 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 408182 sc-eQTL 1.93e-03 0.176 0.0561 0.421 B_Memory LOneK1K
ENSG00000111144 LTA4H 765142 sc-eQTL 7.46e-01 0.0194 0.0596 0.421 B_Memory LOneK1K
ENSG00000111145 ELK3 614287 sc-eQTL 9.44e-01 -0.0048 0.0681 0.421 B_Memory LOneK1K
ENSG00000139343 SNRPF 949734 sc-eQTL 8.23e-01 0.0148 0.066 0.421 B_Memory LOneK1K
ENSG00000139350 NEDD1 -98561 sc-eQTL 3.43e-01 -0.0822 0.0864 0.421 B_Memory LOneK1K
ENSG00000059758 CDK17 408182 sc-eQTL 2.86e-02 0.108 0.0492 0.421 B_Naive LOneK1K
ENSG00000111144 LTA4H 765142 sc-eQTL 7.32e-01 -0.0191 0.0558 0.421 B_Naive LOneK1K
ENSG00000111145 ELK3 614287 sc-eQTL 1.47e-01 0.092 0.0632 0.421 B_Naive LOneK1K
ENSG00000139343 SNRPF 949734 sc-eQTL 7.24e-01 0.0226 0.064 0.421 B_Naive LOneK1K
ENSG00000139350 NEDD1 -98561 sc-eQTL 4.19e-01 0.0685 0.0846 0.421 B_Naive LOneK1K
ENSG00000059758 CDK17 408182 sc-eQTL 6.89e-01 0.0235 0.0586 0.421 CD14_Mono LOneK1K
ENSG00000084110 HAL 812297 sc-eQTL 3.46e-01 0.0669 0.0709 0.421 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 765142 sc-eQTL 3.07e-01 0.0796 0.0778 0.421 CD14_Mono LOneK1K
ENSG00000111145 ELK3 614287 sc-eQTL 7.68e-01 -0.0166 0.0563 0.421 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 949734 sc-eQTL 5.01e-01 0.0367 0.0543 0.421 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -98561 sc-eQTL 6.92e-04 0.286 0.083 0.421 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 783339 sc-eQTL 8.22e-01 -0.0178 0.079 0.421 CD14_Mono LOneK1K
ENSG00000059758 CDK17 408182 sc-eQTL 9.08e-01 0.00701 0.0607 0.42 CD16_Mono LOneK1K
ENSG00000084110 HAL 812297 sc-eQTL 9.63e-01 -0.00332 0.0717 0.42 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 765142 sc-eQTL 5.05e-01 0.0531 0.0795 0.42 CD16_Mono LOneK1K
ENSG00000111145 ELK3 614287 sc-eQTL 7.12e-01 0.0218 0.0588 0.42 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 949734 sc-eQTL 7.74e-01 0.0174 0.0607 0.42 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -98561 sc-eQTL 2.96e-04 0.278 0.0754 0.42 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 783339 sc-eQTL 4.05e-01 -0.0686 0.0823 0.42 CD16_Mono LOneK1K
ENSG00000059758 CDK17 408182 sc-eQTL 8.83e-01 -0.00625 0.0425 0.42 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 765142 sc-eQTL 3.50e-01 -0.0691 0.0738 0.42 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 614287 sc-eQTL 9.07e-01 0.00788 0.0677 0.42 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 949734 sc-eQTL 6.26e-01 -0.0282 0.0579 0.42 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -98561 sc-eQTL 1.77e-01 0.0974 0.0719 0.42 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -98561 eQTL 1.7800000000000001e-75 0.392 0.0194 0.0 0.0 0.419

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -98561 8.56e-06 1.18e-05 1.58e-06 6.53e-06 2.35e-06 4.47e-06 1.16e-05 2.03e-06 1.01e-05 5.39e-06 1.3e-05 5.33e-06 1.76e-05 3.63e-06 2.82e-06 6.47e-06 4.93e-06 7.18e-06 3.02e-06 2.78e-06 5.06e-06 9.62e-06 7.91e-06 3.36e-06 1.49e-05 3.75e-06 5.21e-06 4.41e-06 1.12e-05 9.59e-06 5.88e-06 1.11e-06 1.12e-06 3.01e-06 4.81e-06 2.53e-06 1.91e-06 1.94e-06 2.19e-06 9.95e-07 9.9e-07 1.3e-05 1.4e-06 2.69e-07 7.67e-07 1.47e-06 1.12e-06 8.43e-07 4.44e-07
ENSG00000257715 \N 783339 2.76e-07 1.59e-07 6.04e-08 2.24e-07 9.79e-08 8.21e-08 1.81e-07 5.66e-08 1.44e-07 6.4e-08 1.66e-07 1.01e-07 2.05e-07 7.64e-08 5.98e-08 7.97e-08 4.18e-08 1.51e-07 7.29e-08 4.89e-08 1.25e-07 1.31e-07 1.58e-07 3.17e-08 1.85e-07 1.23e-07 1.12e-07 1.04e-07 1.24e-07 1.24e-07 1.14e-07 3.65e-08 4.02e-08 8.72e-08 4.84e-08 3.04e-08 4.06e-08 9.26e-08 6.76e-08 5.24e-08 3.82e-08 1.59e-07 5.2e-08 1.87e-08 3.41e-08 1.83e-08 1.22e-07 3.89e-09 5.01e-08