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Genes within 1Mb (chr12:96796784:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 396304 sc-eQTL 4.14e-02 -0.0954 0.0465 0.342 B L1
ENSG00000111144 LTA4H 753264 sc-eQTL 6.30e-01 -0.0281 0.0583 0.342 B L1
ENSG00000111145 ELK3 602409 sc-eQTL 5.69e-01 -0.0354 0.0621 0.342 B L1
ENSG00000139343 SNRPF 937856 sc-eQTL 7.11e-01 -0.0209 0.0564 0.342 B L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 9.38e-01 0.00637 0.0824 0.342 B L1
ENSG00000059758 CDK17 396304 sc-eQTL 6.88e-01 -0.0155 0.0385 0.342 CD4T L1
ENSG00000111144 LTA4H 753264 sc-eQTL 3.22e-01 0.0524 0.0528 0.342 CD4T L1
ENSG00000111145 ELK3 602409 sc-eQTL 9.57e-01 -0.0031 0.0573 0.342 CD4T L1
ENSG00000139343 SNRPF 937856 sc-eQTL 3.77e-01 -0.0442 0.05 0.342 CD4T L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 3.81e-04 0.216 0.0599 0.342 CD4T L1
ENSG00000059758 CDK17 396304 sc-eQTL 1.22e-01 -0.0609 0.0393 0.342 CD8T L1
ENSG00000111144 LTA4H 753264 sc-eQTL 9.74e-01 -0.00138 0.0424 0.342 CD8T L1
ENSG00000111145 ELK3 602409 sc-eQTL 9.68e-01 0.00258 0.0638 0.342 CD8T L1
ENSG00000139343 SNRPF 937856 sc-eQTL 1.17e-01 0.0818 0.052 0.342 CD8T L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.28e-01 0.106 0.0691 0.342 CD8T L1
ENSG00000059758 CDK17 396304 sc-eQTL 1.01e-02 -0.189 0.0726 0.347 DC L1
ENSG00000084110 HAL 800419 sc-eQTL 9.83e-01 0.00183 0.0841 0.347 DC L1
ENSG00000111144 LTA4H 753264 sc-eQTL 2.17e-04 -0.25 0.0664 0.347 DC L1
ENSG00000111145 ELK3 602409 sc-eQTL 9.29e-01 0.00752 0.0842 0.347 DC L1
ENSG00000139343 SNRPF 937856 sc-eQTL 7.09e-01 0.0261 0.07 0.347 DC L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.92e-01 0.0356 0.0898 0.347 DC L1
ENSG00000257715 AC007298.1 771461 sc-eQTL 2.28e-01 -0.0977 0.0808 0.347 DC L1
ENSG00000059758 CDK17 396304 sc-eQTL 6.08e-01 -0.0303 0.059 0.342 Mono L1
ENSG00000084110 HAL 800419 sc-eQTL 2.78e-01 -0.0806 0.0742 0.342 Mono L1
ENSG00000111144 LTA4H 753264 sc-eQTL 1.95e-02 -0.195 0.0829 0.342 Mono L1
ENSG00000111145 ELK3 602409 sc-eQTL 7.01e-01 -0.0217 0.0564 0.342 Mono L1
ENSG00000139343 SNRPF 937856 sc-eQTL 4.00e-01 0.0448 0.0531 0.342 Mono L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 4.93e-05 -0.326 0.0785 0.342 Mono L1
ENSG00000257715 AC007298.1 771461 sc-eQTL 1.99e-01 -0.102 0.0788 0.342 Mono L1
ENSG00000059758 CDK17 396304 sc-eQTL 3.89e-01 -0.0376 0.0435 0.341 NK L1
ENSG00000111144 LTA4H 753264 sc-eQTL 5.96e-03 0.202 0.0727 0.341 NK L1
ENSG00000111145 ELK3 602409 sc-eQTL 7.83e-01 -0.0193 0.0702 0.341 NK L1
ENSG00000139343 SNRPF 937856 sc-eQTL 6.94e-01 -0.0229 0.0582 0.341 NK L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 5.48e-01 -0.0443 0.0736 0.341 NK L1
ENSG00000059758 CDK17 396304 sc-eQTL 5.36e-01 -0.0229 0.0368 0.342 Other_T L1
ENSG00000111144 LTA4H 753264 sc-eQTL 2.00e-01 0.0986 0.0767 0.342 Other_T L1
ENSG00000111145 ELK3 602409 sc-eQTL 4.62e-01 0.0443 0.06 0.342 Other_T L1
ENSG00000139343 SNRPF 937856 sc-eQTL 6.19e-01 -0.0278 0.0558 0.342 Other_T L1
ENSG00000139350 NEDD1 -110439 sc-eQTL 9.02e-01 0.0105 0.0851 0.342 Other_T L1
ENSG00000188596 CFAP54 307213 sc-eQTL 3.55e-03 0.255 0.0864 0.342 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 396304 sc-eQTL 4.64e-01 0.0629 0.0857 0.349 B_Activated L2
ENSG00000111144 LTA4H 753264 sc-eQTL 5.32e-01 -0.0608 0.0971 0.349 B_Activated L2
ENSG00000111145 ELK3 602409 sc-eQTL 4.55e-01 0.0771 0.103 0.349 B_Activated L2
ENSG00000139343 SNRPF 937856 sc-eQTL 5.22e-01 -0.0623 0.0969 0.349 B_Activated L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.50e-01 -0.0461 0.101 0.349 B_Activated L2
ENSG00000059758 CDK17 396304 sc-eQTL 1.78e-02 -0.17 0.0714 0.343 B_Intermediate L2
ENSG00000111144 LTA4H 753264 sc-eQTL 4.72e-01 -0.0505 0.07 0.343 B_Intermediate L2
ENSG00000111145 ELK3 602409 sc-eQTL 5.87e-01 -0.043 0.0789 0.343 B_Intermediate L2
ENSG00000139343 SNRPF 937856 sc-eQTL 5.74e-01 0.0443 0.0786 0.343 B_Intermediate L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 7.15e-02 -0.166 0.0915 0.343 B_Intermediate L2
ENSG00000059758 CDK17 396304 sc-eQTL 5.19e-01 -0.0447 0.0692 0.343 B_Memory L2
ENSG00000111144 LTA4H 753264 sc-eQTL 3.00e-01 -0.0829 0.0797 0.343 B_Memory L2
ENSG00000111145 ELK3 602409 sc-eQTL 9.63e-01 -0.00361 0.0786 0.343 B_Memory L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.44e-01 -0.0272 0.0833 0.343 B_Memory L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 2.23e-01 0.112 0.0918 0.343 B_Memory L2
ENSG00000059758 CDK17 396304 sc-eQTL 7.55e-02 -0.101 0.0567 0.342 B_Naive1 L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.38e-01 -0.0706 0.0597 0.342 B_Naive1 L2
ENSG00000111145 ELK3 602409 sc-eQTL 2.98e-02 -0.153 0.07 0.342 B_Naive1 L2
ENSG00000139343 SNRPF 937856 sc-eQTL 6.00e-01 0.0361 0.0688 0.342 B_Naive1 L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.32e-01 0.133 0.0878 0.342 B_Naive1 L2
ENSG00000059758 CDK17 396304 sc-eQTL 5.47e-01 -0.0433 0.0716 0.341 B_Naive2 L2
ENSG00000111144 LTA4H 753264 sc-eQTL 7.58e-01 -0.0209 0.0679 0.341 B_Naive2 L2
ENSG00000111145 ELK3 602409 sc-eQTL 7.00e-01 -0.0309 0.0801 0.341 B_Naive2 L2
ENSG00000139343 SNRPF 937856 sc-eQTL 8.84e-01 0.0116 0.0795 0.341 B_Naive2 L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 2.86e-01 -0.101 0.0943 0.341 B_Naive2 L2
ENSG00000059758 CDK17 396304 sc-eQTL 5.07e-01 -0.0457 0.0688 0.341 CD4_CTL L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.45e-01 0.113 0.0968 0.341 CD4_CTL L2
ENSG00000111145 ELK3 602409 sc-eQTL 3.25e-01 -0.0968 0.0981 0.341 CD4_CTL L2
ENSG00000139343 SNRPF 937856 sc-eQTL 8.73e-01 -0.0137 0.0854 0.341 CD4_CTL L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.24e-01 -0.0485 0.0987 0.341 CD4_CTL L2
ENSG00000059758 CDK17 396304 sc-eQTL 5.42e-01 -0.0257 0.0422 0.342 CD4_Naive L2
ENSG00000111144 LTA4H 753264 sc-eQTL 3.86e-01 0.0529 0.0609 0.342 CD4_Naive L2
ENSG00000111145 ELK3 602409 sc-eQTL 8.99e-01 0.00775 0.061 0.342 CD4_Naive L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.09e-01 -0.0203 0.0542 0.342 CD4_Naive L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.66e-02 0.159 0.0659 0.342 CD4_Naive L2
ENSG00000059758 CDK17 396304 sc-eQTL 3.35e-01 0.0397 0.0411 0.342 CD4_TCM L2
ENSG00000111144 LTA4H 753264 sc-eQTL 7.85e-02 0.123 0.0693 0.342 CD4_TCM L2
ENSG00000111145 ELK3 602409 sc-eQTL 3.91e-01 0.059 0.0686 0.342 CD4_TCM L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.39e-01 -0.0188 0.0563 0.342 CD4_TCM L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 9.76e-03 0.198 0.0758 0.342 CD4_TCM L2
ENSG00000059758 CDK17 396304 sc-eQTL 5.77e-01 -0.0279 0.0499 0.342 CD4_TEM L2
ENSG00000111144 LTA4H 753264 sc-eQTL 4.22e-01 -0.062 0.077 0.342 CD4_TEM L2
ENSG00000111145 ELK3 602409 sc-eQTL 7.09e-01 0.0267 0.0716 0.342 CD4_TEM L2
ENSG00000139343 SNRPF 937856 sc-eQTL 9.16e-01 -0.00791 0.075 0.342 CD4_TEM L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 3.26e-01 0.0874 0.0888 0.342 CD4_TEM L2
ENSG00000059758 CDK17 396304 sc-eQTL 1.13e-01 -0.0765 0.0481 0.342 CD8_CTL L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.23e-01 0.106 0.087 0.342 CD8_CTL L2
ENSG00000111145 ELK3 602409 sc-eQTL 4.91e-02 0.156 0.0788 0.342 CD8_CTL L2
ENSG00000139343 SNRPF 937856 sc-eQTL 3.08e-01 0.0745 0.0729 0.342 CD8_CTL L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 7.48e-02 0.146 0.0814 0.342 CD8_CTL L2
ENSG00000059758 CDK17 396304 sc-eQTL 6.75e-01 -0.0243 0.0578 0.342 CD8_Naive L2
ENSG00000111144 LTA4H 753264 sc-eQTL 8.13e-02 0.121 0.0688 0.342 CD8_Naive L2
ENSG00000111145 ELK3 602409 sc-eQTL 9.75e-01 -0.00231 0.0733 0.342 CD8_Naive L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.42e-01 0.0218 0.0659 0.342 CD8_Naive L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.47e-01 0.114 0.0781 0.342 CD8_Naive L2
ENSG00000059758 CDK17 396304 sc-eQTL 1.39e-01 -0.0962 0.0648 0.333 CD8_TCM L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.36e-01 -0.113 0.0955 0.333 CD8_TCM L2
ENSG00000111145 ELK3 602409 sc-eQTL 4.05e-01 -0.0675 0.081 0.333 CD8_TCM L2
ENSG00000139343 SNRPF 937856 sc-eQTL 1.41e-01 0.137 0.0929 0.333 CD8_TCM L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.63e-01 -0.0399 0.0914 0.333 CD8_TCM L2
ENSG00000059758 CDK17 396304 sc-eQTL 3.43e-02 -0.166 0.0778 0.345 CD8_TEM L2
ENSG00000111144 LTA4H 753264 sc-eQTL 5.95e-01 0.0513 0.0963 0.345 CD8_TEM L2
ENSG00000111145 ELK3 602409 sc-eQTL 2.18e-01 0.117 0.0944 0.345 CD8_TEM L2
ENSG00000139343 SNRPF 937856 sc-eQTL 5.52e-01 0.0524 0.088 0.345 CD8_TEM L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 5.11e-01 0.0629 0.0955 0.345 CD8_TEM L2
ENSG00000059758 CDK17 396304 sc-eQTL 4.92e-01 -0.0365 0.0529 0.34 MAIT L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.78e-01 0.0887 0.0816 0.34 MAIT L2
ENSG00000111145 ELK3 602409 sc-eQTL 8.98e-01 -0.00878 0.0687 0.34 MAIT L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.16e-01 -0.029 0.0796 0.34 MAIT L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.26e-01 0.136 0.0889 0.34 MAIT L2
ENSG00000188596 CFAP54 307213 sc-eQTL 4.03e-01 0.0741 0.0884 0.34 MAIT L2
ENSG00000059758 CDK17 396304 sc-eQTL 6.74e-02 -0.1 0.0544 0.344 NK_CD56bright L2
ENSG00000111144 LTA4H 753264 sc-eQTL 4.69e-03 0.228 0.0796 0.344 NK_CD56bright L2
ENSG00000111145 ELK3 602409 sc-eQTL 8.44e-02 -0.148 0.0855 0.344 NK_CD56bright L2
ENSG00000139343 SNRPF 937856 sc-eQTL 9.27e-02 -0.151 0.0895 0.344 NK_CD56bright L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.94e-01 -0.0358 0.0909 0.344 NK_CD56bright L2
ENSG00000059758 CDK17 396304 sc-eQTL 8.67e-01 -0.00785 0.0469 0.343 NK_CD56dim L2
ENSG00000111144 LTA4H 753264 sc-eQTL 5.83e-02 0.16 0.084 0.343 NK_CD56dim L2
ENSG00000111145 ELK3 602409 sc-eQTL 6.10e-01 -0.0383 0.0749 0.343 NK_CD56dim L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.06e-01 -0.0269 0.0713 0.343 NK_CD56dim L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 4.83e-01 -0.0577 0.0821 0.343 NK_CD56dim L2
ENSG00000059758 CDK17 396304 sc-eQTL 6.79e-01 0.031 0.0746 0.34 NK_HLA L2
ENSG00000111144 LTA4H 753264 sc-eQTL 4.71e-03 0.274 0.0959 0.34 NK_HLA L2
ENSG00000111145 ELK3 602409 sc-eQTL 3.14e-01 0.0915 0.0906 0.34 NK_HLA L2
ENSG00000139343 SNRPF 937856 sc-eQTL 2.98e-01 -0.0984 0.0944 0.34 NK_HLA L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.38e-01 -0.0422 0.0895 0.34 NK_HLA L2
ENSG00000059758 CDK17 396304 sc-eQTL 2.09e-01 -0.0634 0.0503 0.343 NK_cytokine L2
ENSG00000111144 LTA4H 753264 sc-eQTL 8.27e-03 0.224 0.084 0.343 NK_cytokine L2
ENSG00000111145 ELK3 602409 sc-eQTL 1.74e-01 0.111 0.0814 0.343 NK_cytokine L2
ENSG00000139343 SNRPF 937856 sc-eQTL 6.12e-01 0.0352 0.0692 0.343 NK_cytokine L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 2.42e-01 -0.1 0.0853 0.343 NK_cytokine L2
ENSG00000059758 CDK17 396304 sc-eQTL 9.84e-01 -0.00183 0.0892 0.378 PB L2
ENSG00000111144 LTA4H 753264 sc-eQTL 7.97e-01 -0.0202 0.0787 0.378 PB L2
ENSG00000111145 ELK3 602409 sc-eQTL 2.60e-01 0.113 0.1 0.378 PB L2
ENSG00000139343 SNRPF 937856 sc-eQTL 4.99e-02 -0.192 0.0967 0.378 PB L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 8.71e-01 -0.0191 0.117 0.378 PB L2
ENSG00000059758 CDK17 396304 sc-eQTL 4.27e-01 -0.0456 0.0573 0.346 Pro_T L2
ENSG00000111144 LTA4H 753264 sc-eQTL 1.52e-01 0.108 0.0754 0.346 Pro_T L2
ENSG00000111145 ELK3 602409 sc-eQTL 3.50e-01 0.0856 0.0915 0.346 Pro_T L2
ENSG00000139343 SNRPF 937856 sc-eQTL 5.81e-01 -0.0319 0.0578 0.346 Pro_T L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.34e-01 -0.126 0.0835 0.346 Pro_T L2
ENSG00000188596 CFAP54 307213 sc-eQTL 7.30e-01 0.0235 0.0679 0.346 Pro_T L2
ENSG00000059758 CDK17 396304 sc-eQTL 8.47e-01 -0.0123 0.0638 0.342 Treg L2
ENSG00000111144 LTA4H 753264 sc-eQTL 6.60e-01 0.0356 0.0807 0.342 Treg L2
ENSG00000111145 ELK3 602409 sc-eQTL 4.19e-02 -0.148 0.0725 0.342 Treg L2
ENSG00000139343 SNRPF 937856 sc-eQTL 4.60e-01 -0.0626 0.0846 0.342 Treg L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 1.23e-01 0.146 0.094 0.342 Treg L2
ENSG00000059758 CDK17 396304 sc-eQTL 1.52e-01 -0.113 0.0782 0.361 cDC L2
ENSG00000084110 HAL 800419 sc-eQTL 6.52e-01 0.037 0.0817 0.361 cDC L2
ENSG00000111144 LTA4H 753264 sc-eQTL 2.14e-01 -0.0871 0.0698 0.361 cDC L2
ENSG00000111145 ELK3 602409 sc-eQTL 7.16e-02 0.166 0.0917 0.361 cDC L2
ENSG00000139343 SNRPF 937856 sc-eQTL 6.39e-01 -0.0363 0.0774 0.361 cDC L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 9.13e-01 0.0103 0.0944 0.361 cDC L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 1.30e-01 -0.12 0.0791 0.361 cDC L2
ENSG00000059758 CDK17 396304 sc-eQTL 8.34e-01 -0.0143 0.0682 0.342 cMono_IL1B L2
ENSG00000084110 HAL 800419 sc-eQTL 1.72e-01 -0.101 0.0741 0.342 cMono_IL1B L2
ENSG00000111144 LTA4H 753264 sc-eQTL 8.70e-03 -0.209 0.0791 0.342 cMono_IL1B L2
ENSG00000111145 ELK3 602409 sc-eQTL 5.81e-01 -0.0342 0.0619 0.342 cMono_IL1B L2
ENSG00000139343 SNRPF 937856 sc-eQTL 9.98e-01 -0.000143 0.0639 0.342 cMono_IL1B L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 5.96e-03 -0.24 0.0864 0.342 cMono_IL1B L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 6.36e-02 -0.152 0.0814 0.342 cMono_IL1B L2
ENSG00000059758 CDK17 396304 sc-eQTL 8.86e-01 -0.011 0.0768 0.342 cMono_S100A L2
ENSG00000084110 HAL 800419 sc-eQTL 5.86e-01 -0.047 0.0862 0.342 cMono_S100A L2
ENSG00000111144 LTA4H 753264 sc-eQTL 8.38e-03 -0.226 0.0847 0.342 cMono_S100A L2
ENSG00000111145 ELK3 602409 sc-eQTL 9.02e-01 0.00862 0.0702 0.342 cMono_S100A L2
ENSG00000139343 SNRPF 937856 sc-eQTL 9.39e-01 0.00533 0.0693 0.342 cMono_S100A L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 8.79e-03 -0.244 0.0921 0.342 cMono_S100A L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 2.16e-01 -0.109 0.0878 0.342 cMono_S100A L2
ENSG00000059758 CDK17 396304 sc-eQTL 7.58e-01 0.0238 0.077 0.336 gdT L2
ENSG00000111144 LTA4H 753264 sc-eQTL 1.87e-01 0.152 0.115 0.336 gdT L2
ENSG00000111145 ELK3 602409 sc-eQTL 5.80e-01 0.059 0.107 0.336 gdT L2
ENSG00000139343 SNRPF 937856 sc-eQTL 9.13e-01 0.0113 0.103 0.336 gdT L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 4.19e-01 -0.0918 0.113 0.336 gdT L2
ENSG00000188596 CFAP54 307213 sc-eQTL 5.49e-01 0.0597 0.0995 0.336 gdT L2
ENSG00000059758 CDK17 396304 sc-eQTL 1.04e-01 0.139 0.0851 0.342 intMono L2
ENSG00000084110 HAL 800419 sc-eQTL 9.98e-01 0.000165 0.0866 0.342 intMono L2
ENSG00000111144 LTA4H 753264 sc-eQTL 3.69e-01 -0.0798 0.0887 0.342 intMono L2
ENSG00000111145 ELK3 602409 sc-eQTL 9.36e-01 -0.00633 0.0791 0.342 intMono L2
ENSG00000139343 SNRPF 937856 sc-eQTL 2.66e-01 -0.094 0.0843 0.342 intMono L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 5.90e-01 -0.0474 0.0878 0.342 intMono L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 2.64e-01 -0.0988 0.0881 0.342 intMono L2
ENSG00000059758 CDK17 396304 sc-eQTL 3.64e-01 -0.0637 0.07 0.353 ncMono L2
ENSG00000084110 HAL 800419 sc-eQTL 5.91e-01 -0.0422 0.0782 0.353 ncMono L2
ENSG00000111144 LTA4H 753264 sc-eQTL 3.43e-01 -0.0827 0.0871 0.353 ncMono L2
ENSG00000111145 ELK3 602409 sc-eQTL 6.95e-01 0.0294 0.0749 0.353 ncMono L2
ENSG00000139343 SNRPF 937856 sc-eQTL 3.60e-01 0.0701 0.0764 0.353 ncMono L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 5.92e-02 -0.153 0.0806 0.353 ncMono L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 2.45e-01 -0.108 0.0924 0.353 ncMono L2
ENSG00000059758 CDK17 396304 sc-eQTL 2.31e-01 -0.108 0.0901 0.356 pDC L2
ENSG00000084110 HAL 800419 sc-eQTL 4.33e-01 0.0599 0.0763 0.356 pDC L2
ENSG00000111144 LTA4H 753264 sc-eQTL 3.24e-02 -0.182 0.0843 0.356 pDC L2
ENSG00000111145 ELK3 602409 sc-eQTL 1.55e-01 -0.149 0.104 0.356 pDC L2
ENSG00000139343 SNRPF 937856 sc-eQTL 7.16e-02 0.164 0.0903 0.356 pDC L2
ENSG00000139350 NEDD1 -110439 sc-eQTL 7.41e-01 -0.0334 0.101 0.356 pDC L2
ENSG00000257715 AC007298.1 771461 sc-eQTL 4.16e-01 -0.0704 0.0862 0.356 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 396304 sc-eQTL 9.01e-03 -0.157 0.0597 0.342 B_Memory LOneK1K
ENSG00000111144 LTA4H 753264 sc-eQTL 5.12e-01 -0.0414 0.063 0.342 B_Memory LOneK1K
ENSG00000111145 ELK3 602409 sc-eQTL 8.28e-01 0.0156 0.072 0.342 B_Memory LOneK1K
ENSG00000139343 SNRPF 937856 sc-eQTL 5.53e-01 -0.0414 0.0698 0.342 B_Memory LOneK1K
ENSG00000139350 NEDD1 -110439 sc-eQTL 7.45e-01 -0.0298 0.0916 0.342 B_Memory LOneK1K
ENSG00000059758 CDK17 396304 sc-eQTL 1.72e-01 -0.0702 0.0512 0.342 B_Naive LOneK1K
ENSG00000111144 LTA4H 753264 sc-eQTL 5.03e-01 -0.0388 0.0577 0.342 B_Naive LOneK1K
ENSG00000111145 ELK3 602409 sc-eQTL 5.20e-02 -0.127 0.0652 0.342 B_Naive LOneK1K
ENSG00000139343 SNRPF 937856 sc-eQTL 7.13e-01 0.0244 0.0662 0.342 B_Naive LOneK1K
ENSG00000139350 NEDD1 -110439 sc-eQTL 8.36e-01 0.0181 0.0877 0.342 B_Naive LOneK1K
ENSG00000059758 CDK17 396304 sc-eQTL 6.23e-01 -0.0303 0.0615 0.342 CD14_Mono LOneK1K
ENSG00000084110 HAL 800419 sc-eQTL 1.25e-01 -0.114 0.0741 0.342 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 753264 sc-eQTL 1.15e-02 -0.206 0.0806 0.342 CD14_Mono LOneK1K
ENSG00000111145 ELK3 602409 sc-eQTL 8.52e-01 -0.011 0.0591 0.342 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 937856 sc-eQTL 6.31e-01 0.0274 0.057 0.342 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -110439 sc-eQTL 6.25e-04 -0.302 0.087 0.342 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 771461 sc-eQTL 1.37e-01 -0.123 0.0824 0.342 CD14_Mono LOneK1K
ENSG00000059758 CDK17 396304 sc-eQTL 9.62e-01 0.00299 0.0629 0.343 CD16_Mono LOneK1K
ENSG00000084110 HAL 800419 sc-eQTL 3.55e-01 -0.0689 0.0743 0.343 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 753264 sc-eQTL 1.22e-01 -0.127 0.082 0.343 CD16_Mono LOneK1K
ENSG00000111145 ELK3 602409 sc-eQTL 6.92e-01 0.0242 0.061 0.343 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 937856 sc-eQTL 6.06e-01 0.0325 0.0629 0.343 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -110439 sc-eQTL 7.21e-02 -0.145 0.0801 0.343 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 771461 sc-eQTL 3.74e-01 -0.0761 0.0853 0.343 CD16_Mono LOneK1K
ENSG00000059758 CDK17 396304 sc-eQTL 2.47e-01 -0.0513 0.0442 0.343 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 753264 sc-eQTL 8.73e-03 0.201 0.0758 0.343 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 602409 sc-eQTL 9.95e-01 0.000421 0.0705 0.343 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 937856 sc-eQTL 6.70e-01 -0.0257 0.0603 0.343 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -110439 sc-eQTL 3.94e-01 -0.0642 0.0751 0.343 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -110439 eQTL 2.28e-22 -0.237 0.0237 0.0 0.0 0.327

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139343 \N 937856 2.76e-07 1.27e-07 5.64e-08 1.81e-07 9.87e-08 9.48e-08 1.6e-07 5.66e-08 1.45e-07 6.08e-08 1.52e-07 1.08e-07 1.53e-07 7.37e-08 6.18e-08 7.23e-08 4.24e-08 1.44e-07 6.32e-08 4.78e-08 1.26e-07 1.26e-07 1.44e-07 2.91e-08 1.55e-07 1.22e-07 1.13e-07 9.74e-08 1.2e-07 1e-07 9.92e-08 2.96e-08 3.73e-08 8.72e-08 5.64e-08 3.14e-08 5.29e-08 8.63e-08 6.86e-08 3.86e-08 4.69e-08 1.33e-07 5.27e-08 1.42e-08 4.67e-08 1.89e-08 1.15e-07 1.9e-09 4.8e-08
ENSG00000139350 NEDD1 -110439 4.6e-06 5.08e-06 6.57e-07 3.1e-06 1.48e-06 1.62e-06 5.37e-06 1.23e-06 5.09e-06 2.97e-06 5.73e-06 3.32e-06 7.51e-06 1.97e-06 1.16e-06 4.06e-06 1.87e-06 3.98e-06 1.5e-06 1.51e-06 2.71e-06 5.09e-06 4.73e-06 1.89e-06 7.21e-06 2.12e-06 2.24e-06 1.53e-06 4.73e-06 4.93e-06 2.77e-06 4.73e-07 8.05e-07 2.34e-06 1.93e-06 1.31e-06 1.11e-06 4.5e-07 9.04e-07 6.99e-07 8.59e-07 5.69e-06 4.73e-07 1.61e-07 7.75e-07 1.17e-06 1.04e-06 6.8e-07 6.19e-07
ENSG00000257715 \N 771461 3.07e-07 1.5e-07 6.42e-08 2.05e-07 1.02e-07 8.63e-08 1.99e-07 6.12e-08 1.71e-07 9.72e-08 1.61e-07 1.31e-07 2.05e-07 8e-08 5.69e-08 9.01e-08 4.25e-08 1.77e-07 7.39e-08 5.48e-08 1.26e-07 1.65e-07 1.58e-07 3.42e-08 1.98e-07 1.43e-07 1.22e-07 1.1e-07 1.32e-07 1.1e-07 1.09e-07 4.32e-08 3.56e-08 9.58e-08 3.51e-08 2.74e-08 4.28e-08 7.61e-08 6.39e-08 4.24e-08 5.65e-08 1.48e-07 3.35e-08 1.22e-08 3.07e-08 1.01e-08 7.61e-08 2.13e-09 4.83e-08
ENSG00000257878 \N 800263 3.02e-07 1.33e-07 6.41e-08 2.01e-07 9.94e-08 8.33e-08 1.9e-07 5.78e-08 1.59e-07 9.35e-08 1.62e-07 1.23e-07 1.95e-07 8.13e-08 5.43e-08 8.08e-08 4.45e-08 1.72e-07 7.16e-08 5.33e-08 1.18e-07 1.47e-07 1.62e-07 3.49e-08 1.72e-07 1.39e-07 1.2e-07 1.04e-07 1.34e-07 1.06e-07 1.07e-07 3.78e-08 3.29e-08 9.8e-08 3.07e-08 2.79e-08 5.35e-08 8.25e-08 6.3e-08 3.99e-08 5.05e-08 1.46e-07 3.99e-08 1.3e-08 3.2e-08 1.55e-08 7.92e-08 2.05e-09 4.94e-08