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Genes within 1Mb (chr12:96793413:C:CAT):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 392933 sc-eQTL 2.94e-02 -0.102 0.0465 0.34 B L1
ENSG00000111144 LTA4H 749893 sc-eQTL 6.38e-01 -0.0275 0.0583 0.34 B L1
ENSG00000111145 ELK3 599038 sc-eQTL 4.83e-01 -0.0436 0.0621 0.34 B L1
ENSG00000139343 SNRPF 934485 sc-eQTL 6.84e-01 -0.023 0.0564 0.34 B L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 8.20e-01 0.0188 0.0824 0.34 B L1
ENSG00000059758 CDK17 392933 sc-eQTL 6.57e-01 -0.0171 0.0385 0.34 CD4T L1
ENSG00000111144 LTA4H 749893 sc-eQTL 3.09e-01 0.0539 0.0528 0.34 CD4T L1
ENSG00000111145 ELK3 599038 sc-eQTL 9.17e-01 0.00596 0.0573 0.34 CD4T L1
ENSG00000139343 SNRPF 934485 sc-eQTL 3.81e-01 -0.0439 0.05 0.34 CD4T L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.88e-04 0.227 0.0597 0.34 CD4T L1
ENSG00000059758 CDK17 392933 sc-eQTL 1.00e-01 -0.0647 0.0392 0.34 CD8T L1
ENSG00000111144 LTA4H 749893 sc-eQTL 9.58e-01 0.00221 0.0424 0.34 CD8T L1
ENSG00000111145 ELK3 599038 sc-eQTL 8.14e-01 0.0151 0.0638 0.34 CD8T L1
ENSG00000139343 SNRPF 934485 sc-eQTL 1.28e-01 0.0794 0.052 0.34 CD8T L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.06e-01 0.112 0.0691 0.34 CD8T L1
ENSG00000059758 CDK17 392933 sc-eQTL 1.41e-02 -0.18 0.0726 0.345 DC L1
ENSG00000084110 HAL 797048 sc-eQTL 9.13e-01 0.00922 0.0839 0.345 DC L1
ENSG00000111144 LTA4H 749893 sc-eQTL 2.73e-04 -0.246 0.0664 0.345 DC L1
ENSG00000111145 ELK3 599038 sc-eQTL 9.47e-01 0.00557 0.084 0.345 DC L1
ENSG00000139343 SNRPF 934485 sc-eQTL 6.87e-01 0.0282 0.0699 0.345 DC L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.60e-01 0.0395 0.0897 0.345 DC L1
ENSG00000257715 AC007298.1 768090 sc-eQTL 2.29e-01 -0.0975 0.0807 0.345 DC L1
ENSG00000059758 CDK17 392933 sc-eQTL 5.30e-01 -0.0371 0.0589 0.34 Mono L1
ENSG00000084110 HAL 797048 sc-eQTL 2.64e-01 -0.0829 0.074 0.34 Mono L1
ENSG00000111144 LTA4H 749893 sc-eQTL 2.41e-02 -0.188 0.0828 0.34 Mono L1
ENSG00000111145 ELK3 599038 sc-eQTL 7.50e-01 -0.018 0.0563 0.34 Mono L1
ENSG00000139343 SNRPF 934485 sc-eQTL 3.89e-01 0.0457 0.053 0.34 Mono L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.55e-05 -0.32 0.0785 0.34 Mono L1
ENSG00000257715 AC007298.1 768090 sc-eQTL 1.87e-01 -0.104 0.0787 0.34 Mono L1
ENSG00000059758 CDK17 392933 sc-eQTL 3.36e-01 -0.0419 0.0434 0.339 NK L1
ENSG00000111144 LTA4H 749893 sc-eQTL 4.08e-03 0.21 0.0723 0.339 NK L1
ENSG00000111145 ELK3 599038 sc-eQTL 6.61e-01 -0.0307 0.0699 0.339 NK L1
ENSG00000139343 SNRPF 934485 sc-eQTL 6.93e-01 -0.0229 0.058 0.339 NK L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.49e-01 -0.0236 0.0734 0.339 NK L1
ENSG00000059758 CDK17 392933 sc-eQTL 5.23e-01 -0.0235 0.0368 0.34 Other_T L1
ENSG00000111144 LTA4H 749893 sc-eQTL 1.93e-01 0.0999 0.0766 0.34 Other_T L1
ENSG00000111145 ELK3 599038 sc-eQTL 5.83e-01 0.0329 0.06 0.34 Other_T L1
ENSG00000139343 SNRPF 934485 sc-eQTL 6.37e-01 -0.0263 0.0558 0.34 Other_T L1
ENSG00000139350 NEDD1 -113810 sc-eQTL 8.22e-01 0.0192 0.0849 0.34 Other_T L1
ENSG00000188596 CFAP54 303842 sc-eQTL 2.89e-03 0.26 0.0861 0.34 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 392933 sc-eQTL 4.49e-01 0.065 0.0858 0.347 B_Activated L2
ENSG00000111144 LTA4H 749893 sc-eQTL 4.37e-01 -0.0757 0.0971 0.347 B_Activated L2
ENSG00000111145 ELK3 599038 sc-eQTL 5.01e-01 0.0694 0.103 0.347 B_Activated L2
ENSG00000139343 SNRPF 934485 sc-eQTL 4.50e-01 -0.0733 0.0969 0.347 B_Activated L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.00e-01 -0.0392 0.102 0.347 B_Activated L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.38e-02 -0.176 0.0709 0.341 B_Intermediate L2
ENSG00000111144 LTA4H 749893 sc-eQTL 4.99e-01 -0.0471 0.0696 0.341 B_Intermediate L2
ENSG00000111145 ELK3 599038 sc-eQTL 5.88e-01 -0.0426 0.0785 0.341 B_Intermediate L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.24e-01 0.0498 0.0781 0.341 B_Intermediate L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 5.02e-02 -0.179 0.0908 0.341 B_Intermediate L2
ENSG00000059758 CDK17 392933 sc-eQTL 4.09e-01 -0.0571 0.0691 0.341 B_Memory L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.21e-01 -0.0792 0.0797 0.341 B_Memory L2
ENSG00000111145 ELK3 599038 sc-eQTL 9.24e-01 -0.0075 0.0785 0.341 B_Memory L2
ENSG00000139343 SNRPF 934485 sc-eQTL 8.80e-01 -0.0126 0.0832 0.341 B_Memory L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 2.86e-01 0.0981 0.0918 0.341 B_Memory L2
ENSG00000059758 CDK17 392933 sc-eQTL 7.25e-02 -0.102 0.0566 0.34 B_Naive1 L2
ENSG00000111144 LTA4H 749893 sc-eQTL 2.40e-01 -0.0703 0.0596 0.34 B_Naive1 L2
ENSG00000111145 ELK3 599038 sc-eQTL 2.77e-02 -0.155 0.0698 0.34 B_Naive1 L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.54e-01 0.0407 0.0687 0.34 B_Naive1 L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.99e-02 0.154 0.0875 0.34 B_Naive1 L2
ENSG00000059758 CDK17 392933 sc-eQTL 5.16e-01 -0.0465 0.0714 0.339 B_Naive2 L2
ENSG00000111144 LTA4H 749893 sc-eQTL 6.84e-01 -0.0276 0.0677 0.339 B_Naive2 L2
ENSG00000111145 ELK3 599038 sc-eQTL 6.65e-01 -0.0346 0.0798 0.339 B_Naive2 L2
ENSG00000139343 SNRPF 934485 sc-eQTL 9.96e-01 0.000393 0.0793 0.339 B_Naive2 L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 3.32e-01 -0.0914 0.0941 0.339 B_Naive2 L2
ENSG00000059758 CDK17 392933 sc-eQTL 3.44e-01 -0.0648 0.0684 0.339 CD4_CTL L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.72e-01 0.132 0.0962 0.339 CD4_CTL L2
ENSG00000111145 ELK3 599038 sc-eQTL 4.31e-01 -0.0771 0.0977 0.339 CD4_CTL L2
ENSG00000139343 SNRPF 934485 sc-eQTL 7.40e-01 -0.0282 0.085 0.339 CD4_CTL L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.40e-01 -0.0461 0.0983 0.339 CD4_CTL L2
ENSG00000059758 CDK17 392933 sc-eQTL 5.17e-01 -0.0274 0.0421 0.34 CD4_Naive L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.50e-01 0.057 0.0609 0.34 CD4_Naive L2
ENSG00000111145 ELK3 599038 sc-eQTL 7.51e-01 0.0194 0.061 0.34 CD4_Naive L2
ENSG00000139343 SNRPF 934485 sc-eQTL 7.59e-01 -0.0166 0.0542 0.34 CD4_Naive L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.84e-03 0.176 0.0656 0.34 CD4_Naive L2
ENSG00000059758 CDK17 392933 sc-eQTL 3.37e-01 0.0395 0.0411 0.34 CD4_TCM L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.01e-01 0.114 0.0694 0.34 CD4_TCM L2
ENSG00000111145 ELK3 599038 sc-eQTL 3.19e-01 0.0684 0.0685 0.34 CD4_TCM L2
ENSG00000139343 SNRPF 934485 sc-eQTL 6.92e-01 -0.0224 0.0563 0.34 CD4_TCM L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.21e-02 0.192 0.0759 0.34 CD4_TCM L2
ENSG00000059758 CDK17 392933 sc-eQTL 5.83e-01 -0.0275 0.0499 0.34 CD4_TEM L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.94e-01 -0.0658 0.0769 0.34 CD4_TEM L2
ENSG00000111145 ELK3 599038 sc-eQTL 7.49e-01 0.0229 0.0716 0.34 CD4_TEM L2
ENSG00000139343 SNRPF 934485 sc-eQTL 8.64e-01 -0.0128 0.075 0.34 CD4_TEM L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 2.84e-01 0.0953 0.0887 0.34 CD4_TEM L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.33e-01 -0.0727 0.0482 0.34 CD8_CTL L2
ENSG00000111144 LTA4H 749893 sc-eQTL 2.17e-01 0.108 0.0871 0.34 CD8_CTL L2
ENSG00000111145 ELK3 599038 sc-eQTL 3.65e-02 0.166 0.0788 0.34 CD8_CTL L2
ENSG00000139343 SNRPF 934485 sc-eQTL 4.62e-01 0.0539 0.0731 0.34 CD8_CTL L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.19e-02 0.147 0.0815 0.34 CD8_CTL L2
ENSG00000059758 CDK17 392933 sc-eQTL 5.84e-01 -0.0317 0.0578 0.34 CD8_Naive L2
ENSG00000111144 LTA4H 749893 sc-eQTL 8.28e-02 0.12 0.0688 0.34 CD8_Naive L2
ENSG00000111145 ELK3 599038 sc-eQTL 9.58e-01 0.0039 0.0733 0.34 CD8_Naive L2
ENSG00000139343 SNRPF 934485 sc-eQTL 6.68e-01 0.0283 0.0658 0.34 CD8_Naive L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.28e-01 0.119 0.078 0.34 CD8_Naive L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.58e-01 -0.0919 0.0648 0.331 CD8_TCM L2
ENSG00000111144 LTA4H 749893 sc-eQTL 2.96e-01 -0.1 0.0954 0.331 CD8_TCM L2
ENSG00000111145 ELK3 599038 sc-eQTL 4.17e-01 -0.0657 0.0809 0.331 CD8_TCM L2
ENSG00000139343 SNRPF 934485 sc-eQTL 1.92e-01 0.121 0.0929 0.331 CD8_TCM L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.11e-01 -0.0339 0.0913 0.331 CD8_TCM L2
ENSG00000059758 CDK17 392933 sc-eQTL 4.17e-02 -0.16 0.0778 0.342 CD8_TEM L2
ENSG00000111144 LTA4H 749893 sc-eQTL 5.97e-01 0.051 0.0963 0.342 CD8_TEM L2
ENSG00000111145 ELK3 599038 sc-eQTL 2.13e-01 0.118 0.0943 0.342 CD8_TEM L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.04e-01 0.0589 0.0879 0.342 CD8_TEM L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 5.72e-01 0.054 0.0955 0.342 CD8_TEM L2
ENSG00000059758 CDK17 392933 sc-eQTL 5.04e-01 -0.0353 0.0529 0.338 MAIT L2
ENSG00000111144 LTA4H 749893 sc-eQTL 2.35e-01 0.097 0.0815 0.338 MAIT L2
ENSG00000111145 ELK3 599038 sc-eQTL 7.67e-01 -0.0204 0.0686 0.338 MAIT L2
ENSG00000139343 SNRPF 934485 sc-eQTL 7.68e-01 -0.0235 0.0795 0.338 MAIT L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 9.77e-02 0.148 0.0887 0.338 MAIT L2
ENSG00000188596 CFAP54 303842 sc-eQTL 4.70e-01 0.0639 0.0883 0.338 MAIT L2
ENSG00000059758 CDK17 392933 sc-eQTL 8.25e-02 -0.0949 0.0544 0.342 NK_CD56bright L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.86e-03 0.232 0.0794 0.342 NK_CD56bright L2
ENSG00000111145 ELK3 599038 sc-eQTL 9.01e-02 -0.145 0.0854 0.342 NK_CD56bright L2
ENSG00000139343 SNRPF 934485 sc-eQTL 1.26e-01 -0.137 0.0895 0.342 NK_CD56bright L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.81e-01 -0.0253 0.0908 0.342 NK_CD56bright L2
ENSG00000059758 CDK17 392933 sc-eQTL 7.48e-01 -0.015 0.0467 0.341 NK_CD56dim L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.24e-02 0.18 0.0835 0.341 NK_CD56dim L2
ENSG00000111145 ELK3 599038 sc-eQTL 4.89e-01 -0.0517 0.0746 0.341 NK_CD56dim L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.55e-01 -0.042 0.071 0.341 NK_CD56dim L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 5.51e-01 -0.0488 0.0818 0.341 NK_CD56dim L2
ENSG00000059758 CDK17 392933 sc-eQTL 6.79e-01 0.031 0.0746 0.34 NK_HLA L2
ENSG00000111144 LTA4H 749893 sc-eQTL 4.71e-03 0.274 0.0959 0.34 NK_HLA L2
ENSG00000111145 ELK3 599038 sc-eQTL 3.14e-01 0.0915 0.0906 0.34 NK_HLA L2
ENSG00000139343 SNRPF 934485 sc-eQTL 2.98e-01 -0.0984 0.0944 0.34 NK_HLA L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.38e-01 -0.0422 0.0895 0.34 NK_HLA L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.57e-01 -0.0713 0.0502 0.341 NK_cytokine L2
ENSG00000111144 LTA4H 749893 sc-eQTL 8.13e-03 0.224 0.0838 0.341 NK_cytokine L2
ENSG00000111145 ELK3 599038 sc-eQTL 2.45e-01 0.0947 0.0813 0.341 NK_cytokine L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.97e-01 0.0365 0.0691 0.341 NK_cytokine L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 3.75e-01 -0.0759 0.0853 0.341 NK_cytokine L2
ENSG00000059758 CDK17 392933 sc-eQTL 9.09e-01 -0.0102 0.0891 0.374 PB L2
ENSG00000111144 LTA4H 749893 sc-eQTL 8.97e-01 -0.0102 0.0786 0.374 PB L2
ENSG00000111145 ELK3 599038 sc-eQTL 2.82e-01 0.108 0.1 0.374 PB L2
ENSG00000139343 SNRPF 934485 sc-eQTL 4.94e-02 -0.192 0.0966 0.374 PB L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 9.35e-01 -0.00958 0.117 0.374 PB L2
ENSG00000059758 CDK17 392933 sc-eQTL 4.21e-01 -0.0462 0.0573 0.343 Pro_T L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.42e-01 0.111 0.0753 0.343 Pro_T L2
ENSG00000111145 ELK3 599038 sc-eQTL 4.02e-01 0.0768 0.0914 0.343 Pro_T L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.88e-01 -0.0313 0.0577 0.343 Pro_T L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.32e-01 -0.126 0.0834 0.343 Pro_T L2
ENSG00000188596 CFAP54 303842 sc-eQTL 6.49e-01 0.0309 0.0678 0.343 Pro_T L2
ENSG00000059758 CDK17 392933 sc-eQTL 8.54e-01 -0.0117 0.0637 0.34 Treg L2
ENSG00000111144 LTA4H 749893 sc-eQTL 7.25e-01 0.0285 0.0807 0.34 Treg L2
ENSG00000111145 ELK3 599038 sc-eQTL 4.28e-02 -0.148 0.0724 0.34 Treg L2
ENSG00000139343 SNRPF 934485 sc-eQTL 4.44e-01 -0.0648 0.0846 0.34 Treg L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 1.05e-01 0.153 0.0939 0.34 Treg L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.75e-01 -0.106 0.0782 0.359 cDC L2
ENSG00000084110 HAL 797048 sc-eQTL 6.24e-01 0.0401 0.0817 0.359 cDC L2
ENSG00000111144 LTA4H 749893 sc-eQTL 2.29e-01 -0.0842 0.0698 0.359 cDC L2
ENSG00000111145 ELK3 599038 sc-eQTL 8.00e-02 0.161 0.0917 0.359 cDC L2
ENSG00000139343 SNRPF 934485 sc-eQTL 5.97e-01 -0.041 0.0774 0.359 cDC L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 8.58e-01 0.0169 0.0943 0.359 cDC L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 1.74e-01 -0.108 0.0791 0.359 cDC L2
ENSG00000059758 CDK17 392933 sc-eQTL 7.32e-01 -0.0233 0.068 0.34 cMono_IL1B L2
ENSG00000084110 HAL 797048 sc-eQTL 1.48e-01 -0.107 0.0739 0.34 cMono_IL1B L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.00e-02 -0.205 0.0789 0.34 cMono_IL1B L2
ENSG00000111145 ELK3 599038 sc-eQTL 6.37e-01 -0.0292 0.0618 0.34 cMono_IL1B L2
ENSG00000139343 SNRPF 934485 sc-eQTL 9.77e-01 0.00184 0.0637 0.34 cMono_IL1B L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.08e-03 -0.239 0.0862 0.34 cMono_IL1B L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 6.44e-02 -0.151 0.0812 0.34 cMono_IL1B L2
ENSG00000059758 CDK17 392933 sc-eQTL 8.25e-01 -0.017 0.0766 0.34 cMono_S100A L2
ENSG00000084110 HAL 797048 sc-eQTL 5.95e-01 -0.0458 0.086 0.34 cMono_S100A L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.16e-02 -0.216 0.0847 0.34 cMono_S100A L2
ENSG00000111145 ELK3 599038 sc-eQTL 8.58e-01 0.0125 0.07 0.34 cMono_S100A L2
ENSG00000139343 SNRPF 934485 sc-eQTL 9.27e-01 0.00635 0.0692 0.34 cMono_S100A L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 9.57e-03 -0.24 0.0919 0.34 cMono_S100A L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 2.04e-01 -0.112 0.0876 0.34 cMono_S100A L2
ENSG00000059758 CDK17 392933 sc-eQTL 7.58e-01 0.0238 0.077 0.336 gdT L2
ENSG00000111144 LTA4H 749893 sc-eQTL 1.87e-01 0.152 0.115 0.336 gdT L2
ENSG00000111145 ELK3 599038 sc-eQTL 5.80e-01 0.059 0.107 0.336 gdT L2
ENSG00000139343 SNRPF 934485 sc-eQTL 9.13e-01 0.0113 0.103 0.336 gdT L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 4.19e-01 -0.0918 0.113 0.336 gdT L2
ENSG00000188596 CFAP54 303842 sc-eQTL 5.49e-01 0.0597 0.0995 0.336 gdT L2
ENSG00000059758 CDK17 392933 sc-eQTL 1.24e-01 0.132 0.0851 0.34 intMono L2
ENSG00000084110 HAL 797048 sc-eQTL 9.84e-01 0.00171 0.0866 0.34 intMono L2
ENSG00000111144 LTA4H 749893 sc-eQTL 4.40e-01 -0.0686 0.0887 0.34 intMono L2
ENSG00000111145 ELK3 599038 sc-eQTL 8.79e-01 -0.012 0.0791 0.34 intMono L2
ENSG00000139343 SNRPF 934485 sc-eQTL 2.50e-01 -0.0972 0.0843 0.34 intMono L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.92e-01 -0.0348 0.0879 0.34 intMono L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 3.06e-01 -0.0904 0.0882 0.34 intMono L2
ENSG00000059758 CDK17 392933 sc-eQTL 4.43e-01 -0.0538 0.07 0.351 ncMono L2
ENSG00000084110 HAL 797048 sc-eQTL 6.30e-01 -0.0377 0.0783 0.351 ncMono L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.40e-01 -0.0832 0.0871 0.351 ncMono L2
ENSG00000111145 ELK3 599038 sc-eQTL 6.95e-01 0.0294 0.0749 0.351 ncMono L2
ENSG00000139343 SNRPF 934485 sc-eQTL 2.72e-01 0.084 0.0763 0.351 ncMono L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.95e-02 -0.147 0.0806 0.351 ncMono L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 1.67e-01 -0.128 0.0923 0.351 ncMono L2
ENSG00000059758 CDK17 392933 sc-eQTL 2.31e-01 -0.108 0.0901 0.356 pDC L2
ENSG00000084110 HAL 797048 sc-eQTL 4.33e-01 0.0599 0.0763 0.356 pDC L2
ENSG00000111144 LTA4H 749893 sc-eQTL 3.24e-02 -0.182 0.0843 0.356 pDC L2
ENSG00000111145 ELK3 599038 sc-eQTL 1.55e-01 -0.149 0.104 0.356 pDC L2
ENSG00000139343 SNRPF 934485 sc-eQTL 7.16e-02 0.164 0.0903 0.356 pDC L2
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.41e-01 -0.0334 0.101 0.356 pDC L2
ENSG00000257715 AC007298.1 768090 sc-eQTL 4.16e-01 -0.0704 0.0862 0.356 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 392933 sc-eQTL 6.60e-03 -0.163 0.0596 0.34 B_Memory LOneK1K
ENSG00000111144 LTA4H 749893 sc-eQTL 4.57e-01 -0.0468 0.0629 0.34 B_Memory LOneK1K
ENSG00000111145 ELK3 599038 sc-eQTL 9.93e-01 0.000632 0.0719 0.34 B_Memory LOneK1K
ENSG00000139343 SNRPF 934485 sc-eQTL 4.82e-01 -0.049 0.0696 0.34 B_Memory LOneK1K
ENSG00000139350 NEDD1 -113810 sc-eQTL 7.02e-01 -0.0351 0.0914 0.34 B_Memory LOneK1K
ENSG00000059758 CDK17 392933 sc-eQTL 1.66e-01 -0.0711 0.0512 0.34 B_Naive LOneK1K
ENSG00000111144 LTA4H 749893 sc-eQTL 5.16e-01 -0.0376 0.0577 0.34 B_Naive LOneK1K
ENSG00000111145 ELK3 599038 sc-eQTL 4.67e-02 -0.13 0.0652 0.34 B_Naive LOneK1K
ENSG00000139343 SNRPF 934485 sc-eQTL 7.11e-01 0.0245 0.0662 0.34 B_Naive LOneK1K
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.03e-01 0.0457 0.0876 0.34 B_Naive LOneK1K
ENSG00000059758 CDK17 392933 sc-eQTL 5.27e-01 -0.0388 0.0613 0.34 CD14_Mono LOneK1K
ENSG00000084110 HAL 797048 sc-eQTL 1.15e-01 -0.117 0.0739 0.34 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 749893 sc-eQTL 1.45e-02 -0.198 0.0805 0.34 CD14_Mono LOneK1K
ENSG00000111145 ELK3 599038 sc-eQTL 9.18e-01 -0.00611 0.059 0.34 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 934485 sc-eQTL 6.10e-01 0.0291 0.0569 0.34 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -113810 sc-eQTL 6.40e-04 -0.301 0.0868 0.34 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 768090 sc-eQTL 1.36e-01 -0.123 0.0822 0.34 CD14_Mono LOneK1K
ENSG00000059758 CDK17 392933 sc-eQTL 9.70e-01 0.00237 0.063 0.341 CD16_Mono LOneK1K
ENSG00000084110 HAL 797048 sc-eQTL 3.68e-01 -0.067 0.0743 0.341 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 749893 sc-eQTL 1.42e-01 -0.121 0.0822 0.341 CD16_Mono LOneK1K
ENSG00000111145 ELK3 599038 sc-eQTL 7.49e-01 0.0196 0.0611 0.341 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 934485 sc-eQTL 6.07e-01 0.0324 0.063 0.341 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -113810 sc-eQTL 9.03e-02 -0.137 0.0803 0.341 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 768090 sc-eQTL 3.37e-01 -0.0821 0.0854 0.341 CD16_Mono LOneK1K
ENSG00000059758 CDK17 392933 sc-eQTL 1.77e-01 -0.0595 0.0439 0.341 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 749893 sc-eQTL 5.54e-03 0.211 0.0753 0.341 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 599038 sc-eQTL 8.11e-01 -0.0168 0.0702 0.341 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 934485 sc-eQTL 6.04e-01 -0.0312 0.0601 0.341 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -113810 sc-eQTL 5.78e-01 -0.0417 0.0749 0.341 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139343 \N 934485 1.34e-06 9.82e-07 2.79e-07 1.29e-06 1.04e-07 5.09e-07 1.6e-06 6.75e-08 1.2e-06 2.85e-07 1.41e-06 5.82e-07 2.33e-06 1.76e-07 2.07e-07 4.79e-07 1.85e-07 5.72e-07 8.2e-07 1.82e-07 2.43e-07 1.72e-06 8.95e-07 2.89e-07 1.52e-06 2.71e-07 4.91e-07 3.18e-07 1.24e-06 1.23e-06 4.59e-07 3.68e-08 5.19e-08 6.68e-07 3.92e-07 8.17e-08 1.07e-07 7.53e-08 6.49e-08 1.61e-08 5.45e-08 1.63e-06 5.37e-08 1.64e-07 2.82e-08 1.73e-07 1.03e-07 3.8e-09 4.73e-08
ENSG00000139350 \N -113810 3.27e-05 1.39e-05 2.45e-06 9.71e-06 2.41e-06 5.5e-06 2.11e-05 1.36e-06 1.27e-05 5.14e-06 1.44e-05 5.74e-06 2.57e-05 3.74e-06 3.58e-06 6.67e-06 3.96e-06 1.17e-05 3.09e-06 2.89e-06 6.05e-06 1.65e-05 1.49e-05 2.82e-06 1.53e-05 3.12e-06 5.33e-06 4.58e-06 1.41e-05 7.98e-06 6.13e-06 9.92e-07 1.22e-06 4e-06 6.68e-06 2.28e-06 1.87e-06 2e-06 2.11e-06 2.38e-06 8.22e-07 1.68e-05 2.47e-06 2.52e-07 6.98e-07 2.75e-06 1.68e-06 6.68e-07 4.74e-07
ENSG00000257715 \N 768090 1.99e-06 1.84e-06 3.47e-07 1.62e-06 2.58e-07 6.38e-07 1.25e-06 9.91e-08 1.68e-06 4.03e-07 2.07e-06 7.48e-07 2.68e-06 2.67e-07 4.01e-07 8.25e-07 5.56e-07 7.05e-07 5.56e-07 4.32e-07 3.91e-07 1.96e-06 1.12e-06 5.91e-07 1.97e-06 2.44e-07 7.12e-07 5.29e-07 1.6e-06 1.2e-06 5.45e-07 3.87e-08 9.89e-08 5.55e-07 5.38e-07 2.15e-07 2.9e-07 1.21e-07 1.34e-07 1.17e-07 5.87e-08 2.32e-06 1.68e-07 1.88e-07 5.4e-08 2.95e-07 1.26e-07 2e-09 4.9e-08
ENSG00000257878 \N 796892 1.93e-06 1.49e-06 3.38e-07 1.48e-06 2.1e-07 6.36e-07 1.35e-06 9.07e-08 1.43e-06 3.78e-07 1.84e-06 6.63e-07 2.63e-06 2.57e-07 3.96e-07 7.3e-07 5.06e-07 6.96e-07 5.62e-07 3.96e-07 3.6e-07 1.9e-06 1.04e-06 5.25e-07 1.95e-06 2.44e-07 6.81e-07 4.94e-07 1.59e-06 1.21e-06 5.45e-07 3.89e-08 6.78e-08 5.87e-07 5.3e-07 1.71e-07 1.93e-07 1.27e-07 1.41e-07 8.82e-08 5.53e-08 2.12e-06 1.14e-07 1.59e-07 4.06e-08 3.36e-07 1.01e-07 1.95e-09 4.94e-08