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Genes within 1Mb (chr12:96783899:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 383419 sc-eQTL 2.57e-05 -0.189 0.044 0.361 B L1
ENSG00000111144 LTA4H 740379 sc-eQTL 5.83e-01 0.0313 0.057 0.361 B L1
ENSG00000111145 ELK3 589524 sc-eQTL 5.07e-01 -0.0402 0.0606 0.361 B L1
ENSG00000139343 SNRPF 924971 sc-eQTL 1.67e-01 -0.0761 0.0549 0.361 B L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.93e-01 0.0318 0.0804 0.361 B L1
ENSG00000059758 CDK17 383419 sc-eQTL 3.45e-01 -0.0358 0.0379 0.361 CD4T L1
ENSG00000111144 LTA4H 740379 sc-eQTL 1.30e-01 -0.0788 0.0518 0.361 CD4T L1
ENSG00000111145 ELK3 589524 sc-eQTL 6.21e-01 0.0279 0.0564 0.361 CD4T L1
ENSG00000139343 SNRPF 924971 sc-eQTL 5.44e-01 -0.03 0.0493 0.361 CD4T L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.34e-02 0.112 0.0603 0.361 CD4T L1
ENSG00000059758 CDK17 383419 sc-eQTL 4.54e-02 -0.077 0.0382 0.361 CD8T L1
ENSG00000111144 LTA4H 740379 sc-eQTL 2.92e-02 0.09 0.041 0.361 CD8T L1
ENSG00000111145 ELK3 589524 sc-eQTL 3.09e-01 0.0635 0.0622 0.361 CD8T L1
ENSG00000139343 SNRPF 924971 sc-eQTL 5.85e-01 -0.0279 0.0511 0.361 CD8T L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 7.23e-01 -0.0242 0.0679 0.361 CD8T L1
ENSG00000059758 CDK17 383419 sc-eQTL 3.80e-01 -0.0654 0.0744 0.363 DC L1
ENSG00000084110 HAL 787534 sc-eQTL 3.56e-01 -0.0783 0.0847 0.363 DC L1
ENSG00000111144 LTA4H 740379 sc-eQTL 3.56e-01 -0.0641 0.0692 0.363 DC L1
ENSG00000111145 ELK3 589524 sc-eQTL 6.11e-01 -0.0433 0.0849 0.363 DC L1
ENSG00000139343 SNRPF 924971 sc-eQTL 8.17e-01 0.0164 0.0707 0.363 DC L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.54e-01 0.104 0.0904 0.363 DC L1
ENSG00000257715 AC007298.1 758576 sc-eQTL 7.36e-01 -0.0276 0.0819 0.363 DC L1
ENSG00000059758 CDK17 383419 sc-eQTL 4.46e-01 0.045 0.0589 0.361 Mono L1
ENSG00000084110 HAL 787534 sc-eQTL 5.65e-01 -0.0428 0.0743 0.361 Mono L1
ENSG00000111144 LTA4H 740379 sc-eQTL 6.98e-01 -0.0325 0.0839 0.361 Mono L1
ENSG00000111145 ELK3 589524 sc-eQTL 1.24e-01 0.0866 0.0561 0.361 Mono L1
ENSG00000139343 SNRPF 924971 sc-eQTL 4.08e-01 -0.044 0.0531 0.361 Mono L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 1.17e-01 -0.128 0.0811 0.361 Mono L1
ENSG00000257715 AC007298.1 758576 sc-eQTL 8.17e-01 0.0183 0.0791 0.361 Mono L1
ENSG00000059758 CDK17 383419 sc-eQTL 9.74e-01 -0.00142 0.0443 0.358 NK L1
ENSG00000111144 LTA4H 740379 sc-eQTL 8.00e-01 -0.019 0.0751 0.358 NK L1
ENSG00000111145 ELK3 589524 sc-eQTL 6.75e-01 0.0299 0.0712 0.358 NK L1
ENSG00000139343 SNRPF 924971 sc-eQTL 5.85e-01 -0.0323 0.0591 0.358 NK L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 4.31e-02 -0.151 0.0741 0.358 NK L1
ENSG00000059758 CDK17 383419 sc-eQTL 5.22e-01 -0.0232 0.0362 0.361 Other_T L1
ENSG00000074527 NTN4 992747 sc-eQTL 9.82e-01 -0.00148 0.067 0.361 Other_T L1
ENSG00000111144 LTA4H 740379 sc-eQTL 9.15e-01 0.00811 0.0757 0.361 Other_T L1
ENSG00000111145 ELK3 589524 sc-eQTL 4.52e-01 0.0445 0.059 0.361 Other_T L1
ENSG00000139343 SNRPF 924971 sc-eQTL 5.74e-01 -0.0309 0.0549 0.361 Other_T L1
ENSG00000139350 NEDD1 -123324 sc-eQTL 5.46e-01 0.0505 0.0835 0.361 Other_T L1
ENSG00000188596 CFAP54 294328 sc-eQTL 8.08e-01 0.021 0.0866 0.361 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 383419 sc-eQTL 9.66e-02 -0.141 0.0843 0.375 B_Activated L2
ENSG00000111144 LTA4H 740379 sc-eQTL 9.11e-01 0.0108 0.0962 0.375 B_Activated L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.61e-01 -0.0592 0.102 0.375 B_Activated L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.99e-01 0.123 0.0956 0.375 B_Activated L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 3.34e-01 0.097 0.1 0.375 B_Activated L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.01e-02 -0.155 0.071 0.361 B_Intermediate L2
ENSG00000111144 LTA4H 740379 sc-eQTL 5.01e-01 -0.0468 0.0694 0.361 B_Intermediate L2
ENSG00000111145 ELK3 589524 sc-eQTL 8.09e-01 -0.0189 0.0784 0.361 B_Intermediate L2
ENSG00000139343 SNRPF 924971 sc-eQTL 5.28e-01 -0.0493 0.078 0.361 B_Intermediate L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.35e-01 -0.0434 0.0914 0.361 B_Intermediate L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.18e-02 -0.146 0.0676 0.364 B_Memory L2
ENSG00000111144 LTA4H 740379 sc-eQTL 2.07e-01 -0.0994 0.0786 0.364 B_Memory L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.45e-01 0.0253 0.0776 0.364 B_Memory L2
ENSG00000139343 SNRPF 924971 sc-eQTL 8.44e-01 -0.0162 0.0822 0.364 B_Memory L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 9.30e-01 0.00795 0.0909 0.364 B_Memory L2
ENSG00000059758 CDK17 383419 sc-eQTL 4.67e-03 -0.164 0.0573 0.361 B_Naive1 L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.65e-01 0.0104 0.0612 0.361 B_Naive1 L2
ENSG00000111145 ELK3 589524 sc-eQTL 2.23e-01 -0.0881 0.072 0.361 B_Naive1 L2
ENSG00000139343 SNRPF 924971 sc-eQTL 8.62e-01 -0.0122 0.0703 0.361 B_Naive1 L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 9.66e-01 0.00388 0.0902 0.361 B_Naive1 L2
ENSG00000059758 CDK17 383419 sc-eQTL 7.25e-01 -0.026 0.0738 0.363 B_Naive2 L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.66e-01 -0.0118 0.07 0.363 B_Naive2 L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.90e-01 -0.0219 0.0825 0.363 B_Naive2 L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.90e-01 -0.107 0.0816 0.363 B_Naive2 L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.73e-01 0.0412 0.0973 0.363 B_Naive2 L2
ENSG00000059758 CDK17 383419 sc-eQTL 2.03e-01 -0.0851 0.0666 0.359 CD4_CTL L2
ENSG00000111144 LTA4H 740379 sc-eQTL 7.69e-01 -0.0277 0.0943 0.359 CD4_CTL L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.67e-01 0.0548 0.0954 0.359 CD4_CTL L2
ENSG00000139343 SNRPF 924971 sc-eQTL 9.65e-01 -0.0037 0.083 0.359 CD4_CTL L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.73e-01 0.0406 0.096 0.359 CD4_CTL L2
ENSG00000059758 CDK17 383419 sc-eQTL 2.46e-01 -0.0486 0.0418 0.361 CD4_Naive L2
ENSG00000111144 LTA4H 740379 sc-eQTL 2.00e-01 -0.0777 0.0604 0.361 CD4_Naive L2
ENSG00000111145 ELK3 589524 sc-eQTL 2.94e-01 0.0637 0.0605 0.361 CD4_Naive L2
ENSG00000139343 SNRPF 924971 sc-eQTL 5.90e-01 -0.029 0.0539 0.361 CD4_Naive L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.05e-01 0.0841 0.0661 0.361 CD4_Naive L2
ENSG00000059758 CDK17 383419 sc-eQTL 1.27e-01 -0.0628 0.041 0.361 CD4_TCM L2
ENSG00000111144 LTA4H 740379 sc-eQTL 3.95e-01 -0.0595 0.0698 0.361 CD4_TCM L2
ENSG00000111145 ELK3 589524 sc-eQTL 2.66e-01 0.0764 0.0686 0.361 CD4_TCM L2
ENSG00000139343 SNRPF 924971 sc-eQTL 4.35e-01 -0.0441 0.0563 0.361 CD4_TCM L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 9.87e-01 -0.00122 0.077 0.361 CD4_TCM L2
ENSG00000059758 CDK17 383419 sc-eQTL 2.41e-02 -0.113 0.0496 0.361 CD4_TEM L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.03e-01 -0.0193 0.0775 0.361 CD4_TEM L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.12e-01 -0.0266 0.072 0.361 CD4_TEM L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.19e-01 -0.0752 0.0753 0.361 CD4_TEM L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 1.20e-01 0.139 0.0889 0.361 CD4_TEM L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.18e-01 -0.0488 0.0487 0.361 CD8_CTL L2
ENSG00000111144 LTA4H 740379 sc-eQTL 6.59e-02 0.162 0.0875 0.361 CD8_CTL L2
ENSG00000111145 ELK3 589524 sc-eQTL 8.57e-02 0.138 0.0797 0.361 CD8_CTL L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.95e-01 -0.0628 0.0737 0.361 CD8_CTL L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 3.07e-01 -0.0846 0.0826 0.361 CD8_CTL L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.80e-01 -0.0513 0.0583 0.361 CD8_Naive L2
ENSG00000111144 LTA4H 740379 sc-eQTL 9.58e-02 0.116 0.0695 0.361 CD8_Naive L2
ENSG00000111145 ELK3 589524 sc-eQTL 1.75e-01 0.1 0.0737 0.361 CD8_Naive L2
ENSG00000139343 SNRPF 924971 sc-eQTL 5.43e-01 -0.0405 0.0665 0.361 CD8_Naive L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 4.34e-01 0.062 0.0791 0.361 CD8_Naive L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.78e-01 -0.0569 0.0644 0.359 CD8_TCM L2
ENSG00000111144 LTA4H 740379 sc-eQTL 3.37e-01 -0.0911 0.0946 0.359 CD8_TCM L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.12e-01 0.0297 0.0802 0.359 CD8_TCM L2
ENSG00000139343 SNRPF 924971 sc-eQTL 6.42e-01 -0.043 0.0924 0.359 CD8_TCM L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 5.15e-01 -0.059 0.0904 0.359 CD8_TCM L2
ENSG00000059758 CDK17 383419 sc-eQTL 1.49e-01 -0.112 0.0771 0.372 CD8_TEM L2
ENSG00000111144 LTA4H 740379 sc-eQTL 7.74e-01 -0.0273 0.095 0.372 CD8_TEM L2
ENSG00000111145 ELK3 589524 sc-eQTL 2.76e-01 0.102 0.0931 0.372 CD8_TEM L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.74e-01 0.0771 0.0866 0.372 CD8_TEM L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.00e-01 0.0495 0.0941 0.372 CD8_TEM L2
ENSG00000059758 CDK17 383419 sc-eQTL 6.41e-01 -0.0246 0.0527 0.364 MAIT L2
ENSG00000074527 NTN4 992747 sc-eQTL 6.96e-01 -0.0278 0.0711 0.364 MAIT L2
ENSG00000111144 LTA4H 740379 sc-eQTL 3.42e-01 0.0774 0.0813 0.364 MAIT L2
ENSG00000111145 ELK3 589524 sc-eQTL 6.90e-01 0.0273 0.0684 0.364 MAIT L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.15e-01 -0.125 0.0788 0.364 MAIT L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.64e-01 0.0386 0.0889 0.364 MAIT L2
ENSG00000188596 CFAP54 294328 sc-eQTL 8.43e-01 0.0175 0.0882 0.364 MAIT L2
ENSG00000059758 CDK17 383419 sc-eQTL 9.56e-01 -0.00307 0.0556 0.367 NK_CD56bright L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.11e-01 0.0198 0.0823 0.367 NK_CD56bright L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.43e-01 0.0531 0.0873 0.367 NK_CD56bright L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.51e-01 -0.0852 0.0912 0.367 NK_CD56bright L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 5.45e-02 -0.177 0.0913 0.367 NK_CD56bright L2
ENSG00000059758 CDK17 383419 sc-eQTL 9.29e-01 0.00426 0.048 0.36 NK_CD56dim L2
ENSG00000111144 LTA4H 740379 sc-eQTL 4.71e-01 -0.0626 0.0867 0.36 NK_CD56dim L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.45e-01 0.0465 0.0768 0.36 NK_CD56dim L2
ENSG00000139343 SNRPF 924971 sc-eQTL 5.81e-01 0.0404 0.0731 0.36 NK_CD56dim L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 4.72e-01 -0.0607 0.0841 0.36 NK_CD56dim L2
ENSG00000059758 CDK17 383419 sc-eQTL 4.17e-01 0.0599 0.0737 0.365 NK_HLA L2
ENSG00000111144 LTA4H 740379 sc-eQTL 1.55e-01 -0.138 0.0963 0.365 NK_HLA L2
ENSG00000111145 ELK3 589524 sc-eQTL 1.16e-01 -0.141 0.0892 0.365 NK_HLA L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.18e-01 -0.146 0.093 0.365 NK_HLA L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.16e-01 -0.109 0.0882 0.365 NK_HLA L2
ENSG00000059758 CDK17 383419 sc-eQTL 7.49e-01 0.0166 0.0518 0.36 NK_cytokine L2
ENSG00000111144 LTA4H 740379 sc-eQTL 6.69e-01 0.0375 0.0875 0.36 NK_cytokine L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.06e-01 0.0316 0.0838 0.36 NK_cytokine L2
ENSG00000139343 SNRPF 924971 sc-eQTL 7.95e-01 -0.0184 0.071 0.36 NK_cytokine L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 1.27e-01 -0.134 0.0873 0.36 NK_cytokine L2
ENSG00000059758 CDK17 383419 sc-eQTL 8.39e-01 -0.0194 0.0951 0.37 PB L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.19e-01 0.0192 0.0839 0.37 PB L2
ENSG00000111145 ELK3 589524 sc-eQTL 3.74e-02 -0.222 0.105 0.37 PB L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.17e-01 -0.164 0.104 0.37 PB L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.59e-01 0.141 0.124 0.37 PB L2
ENSG00000059758 CDK17 383419 sc-eQTL 5.40e-01 0.0351 0.0572 0.363 Pro_T L2
ENSG00000074527 NTN4 992747 sc-eQTL 5.97e-01 -0.034 0.0642 0.363 Pro_T L2
ENSG00000111144 LTA4H 740379 sc-eQTL 4.53e-01 -0.0567 0.0755 0.363 Pro_T L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.45e-01 0.0554 0.0913 0.363 Pro_T L2
ENSG00000139343 SNRPF 924971 sc-eQTL 6.21e-01 -0.0286 0.0576 0.363 Pro_T L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 4.20e-01 0.0675 0.0836 0.363 Pro_T L2
ENSG00000188596 CFAP54 294328 sc-eQTL 4.44e-01 -0.0518 0.0676 0.363 Pro_T L2
ENSG00000059758 CDK17 383419 sc-eQTL 8.01e-02 0.111 0.0631 0.361 Treg L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.68e-01 -0.0134 0.0805 0.361 Treg L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.44e-01 0.0443 0.0729 0.361 Treg L2
ENSG00000139343 SNRPF 924971 sc-eQTL 7.46e-01 0.0274 0.0844 0.361 Treg L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.47e-02 0.211 0.0931 0.361 Treg L2
ENSG00000059758 CDK17 383419 sc-eQTL 9.44e-01 -0.00571 0.0806 0.371 cDC L2
ENSG00000084110 HAL 787534 sc-eQTL 9.65e-01 0.00373 0.0838 0.371 cDC L2
ENSG00000111144 LTA4H 740379 sc-eQTL 1.19e-01 -0.112 0.0713 0.371 cDC L2
ENSG00000111145 ELK3 589524 sc-eQTL 8.06e-01 -0.0234 0.0948 0.371 cDC L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.54e-01 0.0736 0.0792 0.371 cDC L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 8.19e-01 0.0222 0.0967 0.371 cDC L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 8.02e-01 -0.0205 0.0815 0.371 cDC L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.79e-01 0.06 0.068 0.361 cMono_IL1B L2
ENSG00000084110 HAL 787534 sc-eQTL 9.11e-01 0.00834 0.0744 0.361 cMono_IL1B L2
ENSG00000111144 LTA4H 740379 sc-eQTL 7.04e-01 -0.0305 0.0803 0.361 cMono_IL1B L2
ENSG00000111145 ELK3 589524 sc-eQTL 7.31e-02 0.111 0.0614 0.361 cMono_IL1B L2
ENSG00000139343 SNRPF 924971 sc-eQTL 3.09e-01 -0.0649 0.0637 0.361 cMono_IL1B L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 3.85e-01 -0.0763 0.0877 0.361 cMono_IL1B L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 5.32e-01 -0.0514 0.082 0.361 cMono_IL1B L2
ENSG00000059758 CDK17 383419 sc-eQTL 9.74e-01 -0.00247 0.0768 0.361 cMono_S100A L2
ENSG00000084110 HAL 787534 sc-eQTL 3.58e-01 -0.0792 0.086 0.361 cMono_S100A L2
ENSG00000111144 LTA4H 740379 sc-eQTL 7.72e-01 -0.025 0.086 0.361 cMono_S100A L2
ENSG00000111145 ELK3 589524 sc-eQTL 9.44e-01 0.00492 0.0701 0.361 cMono_S100A L2
ENSG00000139343 SNRPF 924971 sc-eQTL 4.06e-01 -0.0575 0.0692 0.361 cMono_S100A L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 7.32e-01 -0.0321 0.0935 0.361 cMono_S100A L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 8.31e-01 -0.0188 0.088 0.361 cMono_S100A L2
ENSG00000059758 CDK17 383419 sc-eQTL 7.40e-01 -0.0254 0.0765 0.358 gdT L2
ENSG00000074527 NTN4 992747 sc-eQTL 8.21e-01 -0.0199 0.0878 0.358 gdT L2
ENSG00000111144 LTA4H 740379 sc-eQTL 9.26e-01 -0.0107 0.114 0.358 gdT L2
ENSG00000111145 ELK3 589524 sc-eQTL 4.43e-01 0.0814 0.106 0.358 gdT L2
ENSG00000139343 SNRPF 924971 sc-eQTL 7.15e-02 -0.183 0.101 0.358 gdT L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.14e-01 0.14 0.112 0.358 gdT L2
ENSG00000188596 CFAP54 294328 sc-eQTL 8.44e-01 0.0195 0.0989 0.358 gdT L2
ENSG00000059758 CDK17 383419 sc-eQTL 4.47e-01 -0.066 0.0867 0.362 intMono L2
ENSG00000084110 HAL 787534 sc-eQTL 8.12e-01 0.0209 0.0877 0.362 intMono L2
ENSG00000111144 LTA4H 740379 sc-eQTL 5.46e-01 -0.0543 0.0899 0.362 intMono L2
ENSG00000111145 ELK3 589524 sc-eQTL 5.88e-01 0.0434 0.0801 0.362 intMono L2
ENSG00000139343 SNRPF 924971 sc-eQTL 5.86e-03 -0.234 0.0841 0.362 intMono L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.61e-01 -0.1 0.0888 0.362 intMono L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 6.22e-01 0.0442 0.0895 0.362 intMono L2
ENSG00000059758 CDK17 383419 sc-eQTL 4.55e-01 0.0517 0.0691 0.362 ncMono L2
ENSG00000084110 HAL 787534 sc-eQTL 8.71e-01 -0.0125 0.0772 0.362 ncMono L2
ENSG00000111144 LTA4H 740379 sc-eQTL 8.52e-01 -0.0161 0.0861 0.362 ncMono L2
ENSG00000111145 ELK3 589524 sc-eQTL 9.51e-01 -0.00454 0.0739 0.362 ncMono L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.41e-02 0.184 0.0744 0.362 ncMono L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 3.75e-02 -0.166 0.0793 0.362 ncMono L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 3.86e-01 0.0794 0.0913 0.362 ncMono L2
ENSG00000059758 CDK17 383419 sc-eQTL 3.39e-01 -0.0891 0.093 0.364 pDC L2
ENSG00000084110 HAL 787534 sc-eQTL 5.78e-01 -0.0438 0.0786 0.364 pDC L2
ENSG00000111144 LTA4H 740379 sc-eQTL 2.21e-01 -0.108 0.0877 0.364 pDC L2
ENSG00000111145 ELK3 589524 sc-eQTL 1.72e-01 -0.147 0.107 0.364 pDC L2
ENSG00000139343 SNRPF 924971 sc-eQTL 1.24e-01 -0.144 0.0933 0.364 pDC L2
ENSG00000139350 NEDD1 -123324 sc-eQTL 3.62e-01 0.0946 0.103 0.364 pDC L2
ENSG00000257715 AC007298.1 758576 sc-eQTL 7.01e-01 -0.0342 0.0889 0.364 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 383419 sc-eQTL 2.26e-03 -0.181 0.0584 0.361 B_Memory LOneK1K
ENSG00000111144 LTA4H 740379 sc-eQTL 2.82e-01 -0.0668 0.0619 0.361 B_Memory LOneK1K
ENSG00000111145 ELK3 589524 sc-eQTL 6.31e-01 0.034 0.0709 0.361 B_Memory LOneK1K
ENSG00000139343 SNRPF 924971 sc-eQTL 2.91e-01 -0.0726 0.0685 0.361 B_Memory LOneK1K
ENSG00000139350 NEDD1 -123324 sc-eQTL 2.71e-01 0.0993 0.0899 0.361 B_Memory LOneK1K
ENSG00000059758 CDK17 383419 sc-eQTL 1.06e-02 -0.132 0.0512 0.361 B_Naive LOneK1K
ENSG00000111144 LTA4H 740379 sc-eQTL 9.16e-01 0.00614 0.0584 0.361 B_Naive LOneK1K
ENSG00000111145 ELK3 589524 sc-eQTL 2.01e-01 -0.085 0.0662 0.361 B_Naive LOneK1K
ENSG00000139343 SNRPF 924971 sc-eQTL 4.55e-01 -0.05 0.0668 0.361 B_Naive LOneK1K
ENSG00000139350 NEDD1 -123324 sc-eQTL 9.98e-01 0.000273 0.0886 0.361 B_Naive LOneK1K
ENSG00000059758 CDK17 383419 sc-eQTL 5.11e-01 0.0405 0.0614 0.361 CD14_Mono LOneK1K
ENSG00000084110 HAL 787534 sc-eQTL 5.47e-01 -0.0449 0.0744 0.361 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 740379 sc-eQTL 7.72e-01 -0.0237 0.0817 0.361 CD14_Mono LOneK1K
ENSG00000111145 ELK3 589524 sc-eQTL 1.12e-01 0.0938 0.0587 0.361 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 924971 sc-eQTL 4.01e-01 -0.0479 0.0569 0.361 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -123324 sc-eQTL 6.25e-01 -0.0438 0.0894 0.361 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 758576 sc-eQTL 9.85e-01 -0.0016 0.0828 0.361 CD14_Mono LOneK1K
ENSG00000059758 CDK17 383419 sc-eQTL 7.35e-01 0.0216 0.0636 0.36 CD16_Mono LOneK1K
ENSG00000084110 HAL 787534 sc-eQTL 7.83e-01 -0.0207 0.0752 0.36 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 740379 sc-eQTL 4.76e-01 -0.0594 0.0833 0.36 CD16_Mono LOneK1K
ENSG00000111145 ELK3 589524 sc-eQTL 6.53e-01 -0.0277 0.0616 0.36 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 924971 sc-eQTL 5.98e-01 -0.0336 0.0636 0.36 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -123324 sc-eQTL 1.63e-02 -0.195 0.0805 0.36 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 758576 sc-eQTL 3.19e-01 0.0861 0.0861 0.36 CD16_Mono LOneK1K
ENSG00000059758 CDK17 383419 sc-eQTL 9.32e-01 0.0038 0.0447 0.36 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 740379 sc-eQTL 7.58e-01 -0.024 0.0778 0.36 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 589524 sc-eQTL 8.91e-01 0.00974 0.0712 0.36 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 924971 sc-eQTL 9.89e-01 -0.000816 0.0609 0.36 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -123324 sc-eQTL 1.06e-01 -0.123 0.0755 0.36 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -123324 eQTL 1.7400000000000003e-21 -0.216 0.0222 0.0 0.0 0.375
ENSG00000258177 AC008149.1 559926 eQTL 0.0473 -0.0737 0.0371 0.0 0.0 0.375

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -123324 4.68e-06 5.09e-06 7.29e-07 3.38e-06 1.62e-06 1.56e-06 5.13e-06 9.79e-07 5.15e-06 2.67e-06 5.73e-06 3.26e-06 7.51e-06 1.92e-06 1.23e-06 3.81e-06 1.88e-06 3.61e-06 1.55e-06 1.15e-06 3.04e-06 4.86e-06 4.56e-06 1.47e-06 7.58e-06 1.91e-06 2.35e-06 1.67e-06 4.45e-06 4.67e-06 2.83e-06 3.85e-07 4.82e-07 1.65e-06 2.05e-06 1.16e-06 1.08e-06 4.72e-07 8.38e-07 5.31e-07 6.06e-07 5.67e-06 3.83e-07 1.53e-07 4.86e-07 1.19e-06 1.13e-06 7.5e-07 3.29e-07