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Genes within 1Mb (chr12:96766271:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 365791 sc-eQTL 3.73e-01 0.04 0.0449 0.605 B L1
ENSG00000111144 LTA4H 722751 sc-eQTL 2.63e-01 0.0625 0.0557 0.605 B L1
ENSG00000111145 ELK3 571896 sc-eQTL 8.83e-01 0.00873 0.0595 0.605 B L1
ENSG00000139343 SNRPF 907343 sc-eQTL 7.45e-01 0.0176 0.054 0.605 B L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.75e-01 -0.107 0.0785 0.605 B L1
ENSG00000059758 CDK17 365791 sc-eQTL 8.98e-01 0.00475 0.0371 0.605 CD4T L1
ENSG00000111144 LTA4H 722751 sc-eQTL 4.63e-01 -0.0374 0.0509 0.605 CD4T L1
ENSG00000111145 ELK3 571896 sc-eQTL 4.02e-01 -0.0463 0.0551 0.605 CD4T L1
ENSG00000139343 SNRPF 907343 sc-eQTL 2.99e-01 -0.0502 0.0481 0.605 CD4T L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.44e-01 -0.0866 0.0591 0.605 CD4T L1
ENSG00000059758 CDK17 365791 sc-eQTL 2.52e-01 -0.0437 0.0381 0.605 CD8T L1
ENSG00000111144 LTA4H 722751 sc-eQTL 9.01e-01 0.00509 0.041 0.605 CD8T L1
ENSG00000111145 ELK3 571896 sc-eQTL 1.53e-01 -0.088 0.0614 0.605 CD8T L1
ENSG00000139343 SNRPF 907343 sc-eQTL 8.46e-01 0.00984 0.0506 0.605 CD8T L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 2.96e-01 -0.0702 0.067 0.605 CD8T L1
ENSG00000059758 CDK17 365791 sc-eQTL 7.21e-01 -0.0256 0.0717 0.601 DC L1
ENSG00000084110 HAL 769906 sc-eQTL 3.45e-01 -0.0771 0.0814 0.601 DC L1
ENSG00000111144 LTA4H 722751 sc-eQTL 3.36e-02 0.141 0.066 0.601 DC L1
ENSG00000111145 ELK3 571896 sc-eQTL 6.56e-01 -0.0365 0.0817 0.601 DC L1
ENSG00000139343 SNRPF 907343 sc-eQTL 6.32e-01 0.0325 0.0679 0.601 DC L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.15e-01 -0.137 0.0867 0.601 DC L1
ENSG00000257715 AC007298.1 740948 sc-eQTL 1.82e-01 -0.105 0.0784 0.601 DC L1
ENSG00000059758 CDK17 365791 sc-eQTL 8.24e-01 -0.0128 0.0576 0.605 Mono L1
ENSG00000084110 HAL 769906 sc-eQTL 9.89e-01 -0.000995 0.0726 0.605 Mono L1
ENSG00000111144 LTA4H 722751 sc-eQTL 1.11e-01 0.13 0.0815 0.605 Mono L1
ENSG00000111145 ELK3 571896 sc-eQTL 5.59e-01 -0.0322 0.055 0.605 Mono L1
ENSG00000139343 SNRPF 907343 sc-eQTL 2.60e-01 -0.0585 0.0517 0.605 Mono L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 8.35e-02 -0.138 0.0791 0.605 Mono L1
ENSG00000257715 AC007298.1 740948 sc-eQTL 1.23e-02 0.192 0.0761 0.605 Mono L1
ENSG00000059758 CDK17 365791 sc-eQTL 1.06e-01 0.0697 0.0429 0.605 NK L1
ENSG00000111144 LTA4H 722751 sc-eQTL 1.26e-01 -0.112 0.0729 0.605 NK L1
ENSG00000111145 ELK3 571896 sc-eQTL 8.90e-01 0.00963 0.0696 0.605 NK L1
ENSG00000139343 SNRPF 907343 sc-eQTL 6.84e-01 0.0235 0.0577 0.605 NK L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 9.96e-01 -0.000382 0.073 0.605 NK L1
ENSG00000059758 CDK17 365791 sc-eQTL 2.39e-01 0.0426 0.0361 0.605 Other_T L1
ENSG00000074527 NTN4 975119 sc-eQTL 5.64e-01 -0.0387 0.0669 0.605 Other_T L1
ENSG00000111144 LTA4H 722751 sc-eQTL 1.93e-02 -0.176 0.0747 0.605 Other_T L1
ENSG00000111145 ELK3 571896 sc-eQTL 3.73e-01 -0.0527 0.0589 0.605 Other_T L1
ENSG00000139343 SNRPF 907343 sc-eQTL 4.33e-01 0.043 0.0548 0.605 Other_T L1
ENSG00000139350 NEDD1 -140952 sc-eQTL 6.84e-01 -0.034 0.0835 0.605 Other_T L1
ENSG00000188596 CFAP54 276700 sc-eQTL 6.85e-01 -0.0352 0.0865 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 365791 sc-eQTL 9.36e-01 -0.0068 0.085 0.592 B_Activated L2
ENSG00000111144 LTA4H 722751 sc-eQTL 7.59e-01 0.0296 0.0962 0.592 B_Activated L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.27e-01 -0.00934 0.102 0.592 B_Activated L2
ENSG00000139343 SNRPF 907343 sc-eQTL 8.81e-01 0.0144 0.0961 0.592 B_Activated L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 5.94e-01 -0.0537 0.1 0.592 B_Activated L2
ENSG00000059758 CDK17 365791 sc-eQTL 6.04e-01 0.0374 0.072 0.603 B_Intermediate L2
ENSG00000111144 LTA4H 722751 sc-eQTL 6.10e-01 0.0357 0.0697 0.603 B_Intermediate L2
ENSG00000111145 ELK3 571896 sc-eQTL 3.43e-01 -0.0746 0.0785 0.603 B_Intermediate L2
ENSG00000139343 SNRPF 907343 sc-eQTL 7.52e-01 0.0248 0.0784 0.603 B_Intermediate L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 8.86e-01 0.0132 0.0918 0.603 B_Intermediate L2
ENSG00000059758 CDK17 365791 sc-eQTL 6.10e-01 -0.0355 0.0696 0.608 B_Memory L2
ENSG00000111144 LTA4H 722751 sc-eQTL 4.60e-01 -0.0594 0.0803 0.608 B_Memory L2
ENSG00000111145 ELK3 571896 sc-eQTL 4.25e-01 0.0631 0.0789 0.608 B_Memory L2
ENSG00000139343 SNRPF 907343 sc-eQTL 3.83e-01 -0.0731 0.0836 0.608 B_Memory L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.80e-01 0.124 0.0923 0.608 B_Memory L2
ENSG00000059758 CDK17 365791 sc-eQTL 5.20e-01 0.0365 0.0567 0.605 B_Naive1 L2
ENSG00000111144 LTA4H 722751 sc-eQTL 5.19e-01 0.0383 0.0594 0.605 B_Naive1 L2
ENSG00000111145 ELK3 571896 sc-eQTL 4.76e-01 0.0501 0.0701 0.605 B_Naive1 L2
ENSG00000139343 SNRPF 907343 sc-eQTL 3.21e-01 0.0677 0.0681 0.605 B_Naive1 L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 3.88e-01 -0.0756 0.0875 0.605 B_Naive1 L2
ENSG00000059758 CDK17 365791 sc-eQTL 6.82e-02 0.133 0.0723 0.605 B_Naive2 L2
ENSG00000111144 LTA4H 722751 sc-eQTL 4.16e-01 0.0561 0.0689 0.605 B_Naive2 L2
ENSG00000111145 ELK3 571896 sc-eQTL 6.59e-01 -0.036 0.0814 0.605 B_Naive2 L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.32e-01 0.0635 0.0807 0.605 B_Naive2 L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.54e-01 -0.0719 0.096 0.605 B_Naive2 L2
ENSG00000059758 CDK17 365791 sc-eQTL 9.29e-01 -0.006 0.0673 0.609 CD4_CTL L2
ENSG00000111144 LTA4H 722751 sc-eQTL 6.44e-02 -0.175 0.0941 0.609 CD4_CTL L2
ENSG00000111145 ELK3 571896 sc-eQTL 7.84e-01 0.0263 0.096 0.609 CD4_CTL L2
ENSG00000139343 SNRPF 907343 sc-eQTL 5.86e-01 0.0455 0.0834 0.609 CD4_CTL L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 5.68e-01 -0.0551 0.0965 0.609 CD4_CTL L2
ENSG00000059758 CDK17 365791 sc-eQTL 5.92e-01 0.0219 0.0408 0.605 CD4_Naive L2
ENSG00000111144 LTA4H 722751 sc-eQTL 2.47e-01 -0.0683 0.0588 0.605 CD4_Naive L2
ENSG00000111145 ELK3 571896 sc-eQTL 4.03e-01 -0.0494 0.0589 0.605 CD4_Naive L2
ENSG00000139343 SNRPF 907343 sc-eQTL 3.56e-01 -0.0484 0.0523 0.605 CD4_Naive L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 8.03e-02 -0.113 0.0641 0.605 CD4_Naive L2
ENSG00000059758 CDK17 365791 sc-eQTL 3.73e-01 -0.0352 0.0395 0.605 CD4_TCM L2
ENSG00000111144 LTA4H 722751 sc-eQTL 4.28e-01 -0.0532 0.067 0.605 CD4_TCM L2
ENSG00000111145 ELK3 571896 sc-eQTL 4.40e-01 -0.051 0.0659 0.605 CD4_TCM L2
ENSG00000139343 SNRPF 907343 sc-eQTL 2.27e-01 -0.0653 0.054 0.605 CD4_TCM L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 7.65e-01 -0.0221 0.074 0.605 CD4_TCM L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.06e-01 0.0631 0.0498 0.605 CD4_TEM L2
ENSG00000111144 LTA4H 722751 sc-eQTL 1.33e-01 0.116 0.0767 0.605 CD4_TEM L2
ENSG00000111145 ELK3 571896 sc-eQTL 7.49e-01 0.023 0.0717 0.605 CD4_TEM L2
ENSG00000139343 SNRPF 907343 sc-eQTL 8.14e-02 -0.13 0.0745 0.605 CD4_TEM L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 6.74e-02 -0.162 0.0883 0.605 CD4_TEM L2
ENSG00000059758 CDK17 365791 sc-eQTL 5.68e-01 0.0274 0.048 0.605 CD8_CTL L2
ENSG00000111144 LTA4H 722751 sc-eQTL 6.33e-01 -0.0414 0.0867 0.605 CD8_CTL L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.47e-01 0.00529 0.079 0.605 CD8_CTL L2
ENSG00000139343 SNRPF 907343 sc-eQTL 8.49e-01 -0.0138 0.0726 0.605 CD8_CTL L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 3.58e-01 -0.0748 0.0813 0.605 CD8_CTL L2
ENSG00000059758 CDK17 365791 sc-eQTL 3.53e-01 -0.0533 0.0573 0.605 CD8_Naive L2
ENSG00000111144 LTA4H 722751 sc-eQTL 6.72e-01 0.0292 0.0688 0.605 CD8_Naive L2
ENSG00000111145 ELK3 571896 sc-eQTL 3.30e-02 -0.155 0.072 0.605 CD8_Naive L2
ENSG00000139343 SNRPF 907343 sc-eQTL 1.23e-01 0.101 0.0651 0.605 CD8_Naive L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.30e-01 -0.0616 0.0778 0.605 CD8_Naive L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.35e-01 0.0755 0.0634 0.6 CD8_TCM L2
ENSG00000111144 LTA4H 722751 sc-eQTL 8.17e-01 0.0217 0.0935 0.6 CD8_TCM L2
ENSG00000111145 ELK3 571896 sc-eQTL 5.18e-01 -0.0512 0.0791 0.6 CD8_TCM L2
ENSG00000139343 SNRPF 907343 sc-eQTL 7.29e-01 -0.0316 0.0912 0.6 CD8_TCM L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.35e-01 -0.0698 0.0891 0.6 CD8_TCM L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.07e-01 -0.0977 0.0771 0.605 CD8_TEM L2
ENSG00000111144 LTA4H 722751 sc-eQTL 8.74e-01 -0.015 0.0948 0.605 CD8_TEM L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.76e-01 0.00285 0.0932 0.605 CD8_TEM L2
ENSG00000139343 SNRPF 907343 sc-eQTL 8.10e-01 0.0208 0.0866 0.605 CD8_TEM L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 8.62e-01 -0.0164 0.094 0.605 CD8_TEM L2
ENSG00000059758 CDK17 365791 sc-eQTL 8.11e-01 -0.0125 0.0522 0.604 MAIT L2
ENSG00000074527 NTN4 975119 sc-eQTL 6.93e-01 -0.0278 0.0704 0.604 MAIT L2
ENSG00000111144 LTA4H 722751 sc-eQTL 1.25e-01 -0.124 0.0802 0.604 MAIT L2
ENSG00000111145 ELK3 571896 sc-eQTL 5.05e-01 -0.0452 0.0676 0.604 MAIT L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.99e-01 -0.0531 0.0784 0.604 MAIT L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.96e-01 -0.0601 0.088 0.604 MAIT L2
ENSG00000188596 CFAP54 276700 sc-eQTL 3.43e-01 -0.0828 0.0871 0.604 MAIT L2
ENSG00000059758 CDK17 365791 sc-eQTL 1.11e-02 0.139 0.0544 0.607 NK_CD56bright L2
ENSG00000111144 LTA4H 722751 sc-eQTL 9.06e-01 0.00964 0.0818 0.607 NK_CD56bright L2
ENSG00000111145 ELK3 571896 sc-eQTL 8.31e-01 0.0185 0.0868 0.607 NK_CD56bright L2
ENSG00000139343 SNRPF 907343 sc-eQTL 1.71e-02 0.215 0.0895 0.607 NK_CD56bright L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 6.92e-01 0.0363 0.0916 0.607 NK_CD56bright L2
ENSG00000059758 CDK17 365791 sc-eQTL 6.77e-02 0.0846 0.0461 0.608 NK_CD56dim L2
ENSG00000111144 LTA4H 722751 sc-eQTL 2.26e-01 -0.102 0.0836 0.608 NK_CD56dim L2
ENSG00000111145 ELK3 571896 sc-eQTL 7.46e-01 0.0241 0.0743 0.608 NK_CD56dim L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.46e-01 -0.0539 0.0706 0.608 NK_CD56dim L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 6.49e-01 -0.0371 0.0814 0.608 NK_CD56dim L2
ENSG00000059758 CDK17 365791 sc-eQTL 9.80e-01 -0.0018 0.072 0.61 NK_HLA L2
ENSG00000111144 LTA4H 722751 sc-eQTL 3.65e-02 -0.196 0.0933 0.61 NK_HLA L2
ENSG00000111145 ELK3 571896 sc-eQTL 1.39e-01 0.129 0.0871 0.61 NK_HLA L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.41e-02 0.183 0.0903 0.61 NK_HLA L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 2.91e-01 -0.0912 0.0861 0.61 NK_HLA L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.95e-01 0.0529 0.0504 0.608 NK_cytokine L2
ENSG00000111144 LTA4H 722751 sc-eQTL 5.17e-01 -0.0554 0.0854 0.608 NK_cytokine L2
ENSG00000111145 ELK3 571896 sc-eQTL 5.33e-01 -0.051 0.0818 0.608 NK_cytokine L2
ENSG00000139343 SNRPF 907343 sc-eQTL 3.41e-01 0.066 0.0692 0.608 NK_cytokine L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.88e-01 0.113 0.0853 0.608 NK_cytokine L2
ENSG00000059758 CDK17 365791 sc-eQTL 1.69e-01 -0.141 0.102 0.604 PB L2
ENSG00000111144 LTA4H 722751 sc-eQTL 4.40e-01 -0.0702 0.0905 0.604 PB L2
ENSG00000111145 ELK3 571896 sc-eQTL 6.29e-01 0.0563 0.116 0.604 PB L2
ENSG00000139343 SNRPF 907343 sc-eQTL 9.75e-01 0.00351 0.113 0.604 PB L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 7.88e-01 0.0362 0.135 0.604 PB L2
ENSG00000059758 CDK17 365791 sc-eQTL 9.23e-01 -0.00545 0.0566 0.6 Pro_T L2
ENSG00000074527 NTN4 975119 sc-eQTL 2.38e-01 -0.0749 0.0634 0.6 Pro_T L2
ENSG00000111144 LTA4H 722751 sc-eQTL 3.32e-01 -0.0725 0.0746 0.6 Pro_T L2
ENSG00000111145 ELK3 571896 sc-eQTL 3.43e-01 -0.0858 0.0902 0.6 Pro_T L2
ENSG00000139343 SNRPF 907343 sc-eQTL 5.96e-01 0.0303 0.057 0.6 Pro_T L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 2.54e-01 0.0944 0.0826 0.6 Pro_T L2
ENSG00000188596 CFAP54 276700 sc-eQTL 8.67e-01 0.0112 0.067 0.6 Pro_T L2
ENSG00000059758 CDK17 365791 sc-eQTL 5.52e-01 -0.0368 0.0618 0.605 Treg L2
ENSG00000111144 LTA4H 722751 sc-eQTL 4.23e-01 -0.0628 0.0782 0.605 Treg L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.73e-01 0.00237 0.0709 0.605 Treg L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.96e-01 0.056 0.082 0.605 Treg L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.70e-01 0.125 0.0912 0.605 Treg L2
ENSG00000059758 CDK17 365791 sc-eQTL 8.83e-01 0.0115 0.0782 0.598 cDC L2
ENSG00000084110 HAL 769906 sc-eQTL 3.34e-01 -0.0786 0.0811 0.598 cDC L2
ENSG00000111144 LTA4H 722751 sc-eQTL 3.37e-03 0.202 0.0681 0.598 cDC L2
ENSG00000111145 ELK3 571896 sc-eQTL 4.70e-01 -0.0666 0.0919 0.598 cDC L2
ENSG00000139343 SNRPF 907343 sc-eQTL 5.43e-01 0.0469 0.0769 0.598 cDC L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.75e-01 -0.127 0.0933 0.598 cDC L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 8.28e-01 0.0172 0.0791 0.598 cDC L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.51e-01 -0.0763 0.0663 0.605 cMono_IL1B L2
ENSG00000084110 HAL 769906 sc-eQTL 3.76e-01 0.0643 0.0724 0.605 cMono_IL1B L2
ENSG00000111144 LTA4H 722751 sc-eQTL 8.89e-02 0.133 0.0779 0.605 cMono_IL1B L2
ENSG00000111145 ELK3 571896 sc-eQTL 1.83e-01 -0.0804 0.0601 0.605 cMono_IL1B L2
ENSG00000139343 SNRPF 907343 sc-eQTL 4.72e-01 -0.0448 0.0622 0.605 cMono_IL1B L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 8.87e-03 -0.223 0.0844 0.605 cMono_IL1B L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 1.89e-02 0.187 0.079 0.605 cMono_IL1B L2
ENSG00000059758 CDK17 365791 sc-eQTL 6.93e-01 -0.0298 0.0754 0.605 cMono_S100A L2
ENSG00000084110 HAL 769906 sc-eQTL 8.72e-01 -0.0136 0.0846 0.605 cMono_S100A L2
ENSG00000111144 LTA4H 722751 sc-eQTL 1.53e-01 0.121 0.0841 0.605 cMono_S100A L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.31e-01 -0.00597 0.0689 0.605 cMono_S100A L2
ENSG00000139343 SNRPF 907343 sc-eQTL 6.36e-01 0.0322 0.068 0.605 cMono_S100A L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 7.21e-01 -0.0329 0.0918 0.605 cMono_S100A L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 7.72e-03 0.229 0.085 0.605 cMono_S100A L2
ENSG00000059758 CDK17 365791 sc-eQTL 7.18e-01 0.027 0.0749 0.603 gdT L2
ENSG00000074527 NTN4 975119 sc-eQTL 7.35e-01 0.0292 0.0859 0.603 gdT L2
ENSG00000111144 LTA4H 722751 sc-eQTL 1.25e-01 -0.172 0.111 0.603 gdT L2
ENSG00000111145 ELK3 571896 sc-eQTL 6.07e-01 0.0534 0.104 0.603 gdT L2
ENSG00000139343 SNRPF 907343 sc-eQTL 2.61e-01 0.112 0.0996 0.603 gdT L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 5.59e-01 0.0646 0.11 0.603 gdT L2
ENSG00000188596 CFAP54 276700 sc-eQTL 5.08e-01 0.0642 0.0967 0.603 gdT L2
ENSG00000059758 CDK17 365791 sc-eQTL 1.25e-01 -0.13 0.0843 0.602 intMono L2
ENSG00000084110 HAL 769906 sc-eQTL 4.93e-01 0.0588 0.0856 0.602 intMono L2
ENSG00000111144 LTA4H 722751 sc-eQTL 2.65e-01 0.0981 0.0877 0.602 intMono L2
ENSG00000111145 ELK3 571896 sc-eQTL 5.38e-01 0.0482 0.0783 0.602 intMono L2
ENSG00000139343 SNRPF 907343 sc-eQTL 1.17e-01 -0.131 0.0832 0.602 intMono L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 1.13e-01 -0.138 0.0865 0.602 intMono L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 1.75e-01 0.119 0.0871 0.602 intMono L2
ENSG00000059758 CDK17 365791 sc-eQTL 2.69e-01 0.0742 0.067 0.593 ncMono L2
ENSG00000084110 HAL 769906 sc-eQTL 5.57e-01 -0.0441 0.0749 0.593 ncMono L2
ENSG00000111144 LTA4H 722751 sc-eQTL 9.61e-01 -0.00407 0.0836 0.593 ncMono L2
ENSG00000111145 ELK3 571896 sc-eQTL 8.17e-01 -0.0166 0.0718 0.593 ncMono L2
ENSG00000139343 SNRPF 907343 sc-eQTL 1.56e-01 -0.104 0.073 0.593 ncMono L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 9.45e-01 -0.00541 0.0779 0.593 ncMono L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 7.98e-01 0.0228 0.0889 0.593 ncMono L2
ENSG00000059758 CDK17 365791 sc-eQTL 4.32e-01 -0.0686 0.0871 0.588 pDC L2
ENSG00000084110 HAL 769906 sc-eQTL 8.29e-01 -0.016 0.0737 0.588 pDC L2
ENSG00000111144 LTA4H 722751 sc-eQTL 3.13e-02 0.177 0.0813 0.588 pDC L2
ENSG00000111145 ELK3 571896 sc-eQTL 9.95e-01 0.000684 0.101 0.588 pDC L2
ENSG00000139343 SNRPF 907343 sc-eQTL 9.19e-01 0.00892 0.0881 0.588 pDC L2
ENSG00000139350 NEDD1 -140952 sc-eQTL 5.65e-01 -0.056 0.0971 0.588 pDC L2
ENSG00000257715 AC007298.1 740948 sc-eQTL 7.52e-01 0.0264 0.0833 0.588 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 365791 sc-eQTL 7.82e-01 0.0166 0.0598 0.605 B_Memory LOneK1K
ENSG00000111144 LTA4H 722751 sc-eQTL 7.89e-01 0.0166 0.0621 0.605 B_Memory LOneK1K
ENSG00000111145 ELK3 571896 sc-eQTL 7.20e-01 -0.0255 0.0709 0.605 B_Memory LOneK1K
ENSG00000139343 SNRPF 907343 sc-eQTL 9.04e-01 -0.00833 0.0688 0.605 B_Memory LOneK1K
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.56e-01 0.0673 0.0901 0.605 B_Memory LOneK1K
ENSG00000059758 CDK17 365791 sc-eQTL 1.23e-01 0.0782 0.0505 0.605 B_Naive LOneK1K
ENSG00000111144 LTA4H 722751 sc-eQTL 1.83e-01 0.0759 0.0568 0.605 B_Naive LOneK1K
ENSG00000111145 ELK3 571896 sc-eQTL 8.89e-01 -0.00905 0.0649 0.605 B_Naive LOneK1K
ENSG00000139343 SNRPF 907343 sc-eQTL 5.74e-01 0.0368 0.0653 0.605 B_Naive LOneK1K
ENSG00000139350 NEDD1 -140952 sc-eQTL 2.73e-01 -0.0949 0.0863 0.605 B_Naive LOneK1K
ENSG00000059758 CDK17 365791 sc-eQTL 2.90e-01 -0.0635 0.0598 0.605 CD14_Mono LOneK1K
ENSG00000084110 HAL 769906 sc-eQTL 9.06e-01 0.00855 0.0726 0.605 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 722751 sc-eQTL 7.36e-02 0.142 0.0791 0.605 CD14_Mono LOneK1K
ENSG00000111145 ELK3 571896 sc-eQTL 4.59e-01 -0.0427 0.0575 0.605 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 907343 sc-eQTL 6.25e-01 -0.0272 0.0556 0.605 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -140952 sc-eQTL 7.49e-02 -0.155 0.0865 0.605 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 740948 sc-eQTL 3.85e-03 0.231 0.0792 0.605 CD14_Mono LOneK1K
ENSG00000059758 CDK17 365791 sc-eQTL 7.27e-01 -0.0216 0.0618 0.606 CD16_Mono LOneK1K
ENSG00000084110 HAL 769906 sc-eQTL 9.52e-01 0.00442 0.0731 0.606 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 722751 sc-eQTL 3.67e-01 0.0731 0.0809 0.606 CD16_Mono LOneK1K
ENSG00000111145 ELK3 571896 sc-eQTL 7.35e-01 -0.0203 0.0599 0.606 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 907343 sc-eQTL 3.41e-02 -0.13 0.0612 0.606 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -140952 sc-eQTL 4.15e-01 -0.0647 0.0792 0.606 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 740948 sc-eQTL 8.20e-01 0.0191 0.0839 0.606 CD16_Mono LOneK1K
ENSG00000059758 CDK17 365791 sc-eQTL 1.17e-01 0.0682 0.0434 0.608 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 722751 sc-eQTL 3.78e-02 -0.157 0.0751 0.608 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 571896 sc-eQTL 8.53e-01 0.0129 0.0694 0.608 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 907343 sc-eQTL 8.93e-01 0.00798 0.0594 0.608 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -140952 sc-eQTL 9.41e-01 0.00549 0.0741 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -140952 eQTL 8.02e-08 -0.127 0.0235 0.0 0.0 0.387
ENSG00000188596 CFAP54 276696 eQTL 0.000732 -0.0669 0.0198 0.0 0.0 0.387

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -140952 4.36e-06 4.63e-06 8.72e-07 2.56e-06 1.21e-06 1.33e-06 4.29e-06 1.03e-06 3.49e-06 1.94e-06 4.14e-06 3.04e-06 7.2e-06 2.16e-06 1.47e-06 2.43e-06 2.06e-06 2.79e-06 1.28e-06 1.02e-06 2.12e-06 4.26e-06 3.51e-06 1.55e-06 5.14e-06 1.34e-06 2.25e-06 1.47e-06 4.26e-06 3.64e-06 1.98e-06 5.76e-07 6.52e-07 1.85e-06 2.15e-06 9.97e-07 9.13e-07 3.91e-07 1.06e-06 3.61e-07 2.78e-07 5.32e-06 3.64e-07 1.63e-07 3.58e-07 3.93e-07 7.92e-07 2.72e-07 3.41e-07
ENSG00000188596 CFAP54 276696 1.3e-06 1.07e-06 2.9e-07 1.27e-06 3.71e-07 6.17e-07 1.43e-06 4.11e-07 1.49e-06 5.06e-07 1.88e-06 7.53e-07 2.51e-06 2.83e-07 4.98e-07 9.16e-07 9.07e-07 6.85e-07 7.14e-07 4.58e-07 7.37e-07 1.72e-06 8.94e-07 5.78e-07 2.25e-06 6.01e-07 9.3e-07 8.04e-07 1.55e-06 1.21e-06 7.05e-07 2.24e-07 2.86e-07 5.82e-07 6.04e-07 4.91e-07 7.4e-07 3.09e-07 4.41e-07 3.13e-07 2.88e-07 1.58e-06 2.9e-07 1.06e-07 3.26e-07 1.47e-07 2.43e-07 5.92e-08 1.9e-07