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Genes within 1Mb (chr12:96764994:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 364514 sc-eQTL 3.73e-01 0.04 0.0449 0.605 B L1
ENSG00000111144 LTA4H 721474 sc-eQTL 2.63e-01 0.0625 0.0557 0.605 B L1
ENSG00000111145 ELK3 570619 sc-eQTL 8.83e-01 0.00873 0.0595 0.605 B L1
ENSG00000139343 SNRPF 906066 sc-eQTL 7.45e-01 0.0176 0.054 0.605 B L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.75e-01 -0.107 0.0785 0.605 B L1
ENSG00000059758 CDK17 364514 sc-eQTL 8.98e-01 0.00475 0.0371 0.605 CD4T L1
ENSG00000111144 LTA4H 721474 sc-eQTL 4.63e-01 -0.0374 0.0509 0.605 CD4T L1
ENSG00000111145 ELK3 570619 sc-eQTL 4.02e-01 -0.0463 0.0551 0.605 CD4T L1
ENSG00000139343 SNRPF 906066 sc-eQTL 2.99e-01 -0.0502 0.0481 0.605 CD4T L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.44e-01 -0.0866 0.0591 0.605 CD4T L1
ENSG00000059758 CDK17 364514 sc-eQTL 2.52e-01 -0.0437 0.0381 0.605 CD8T L1
ENSG00000111144 LTA4H 721474 sc-eQTL 9.01e-01 0.00509 0.041 0.605 CD8T L1
ENSG00000111145 ELK3 570619 sc-eQTL 1.53e-01 -0.088 0.0614 0.605 CD8T L1
ENSG00000139343 SNRPF 906066 sc-eQTL 8.46e-01 0.00984 0.0506 0.605 CD8T L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 2.96e-01 -0.0702 0.067 0.605 CD8T L1
ENSG00000059758 CDK17 364514 sc-eQTL 7.21e-01 -0.0256 0.0717 0.601 DC L1
ENSG00000084110 HAL 768629 sc-eQTL 3.45e-01 -0.0771 0.0814 0.601 DC L1
ENSG00000111144 LTA4H 721474 sc-eQTL 3.36e-02 0.141 0.066 0.601 DC L1
ENSG00000111145 ELK3 570619 sc-eQTL 6.56e-01 -0.0365 0.0817 0.601 DC L1
ENSG00000139343 SNRPF 906066 sc-eQTL 6.32e-01 0.0325 0.0679 0.601 DC L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.15e-01 -0.137 0.0867 0.601 DC L1
ENSG00000257715 AC007298.1 739671 sc-eQTL 1.82e-01 -0.105 0.0784 0.601 DC L1
ENSG00000059758 CDK17 364514 sc-eQTL 8.24e-01 -0.0128 0.0576 0.605 Mono L1
ENSG00000084110 HAL 768629 sc-eQTL 9.89e-01 -0.000995 0.0726 0.605 Mono L1
ENSG00000111144 LTA4H 721474 sc-eQTL 1.11e-01 0.13 0.0815 0.605 Mono L1
ENSG00000111145 ELK3 570619 sc-eQTL 5.59e-01 -0.0322 0.055 0.605 Mono L1
ENSG00000139343 SNRPF 906066 sc-eQTL 2.60e-01 -0.0585 0.0517 0.605 Mono L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 8.35e-02 -0.138 0.0791 0.605 Mono L1
ENSG00000257715 AC007298.1 739671 sc-eQTL 1.23e-02 0.192 0.0761 0.605 Mono L1
ENSG00000059758 CDK17 364514 sc-eQTL 1.06e-01 0.0697 0.0429 0.605 NK L1
ENSG00000111144 LTA4H 721474 sc-eQTL 1.26e-01 -0.112 0.0729 0.605 NK L1
ENSG00000111145 ELK3 570619 sc-eQTL 8.90e-01 0.00963 0.0696 0.605 NK L1
ENSG00000139343 SNRPF 906066 sc-eQTL 6.84e-01 0.0235 0.0577 0.605 NK L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 9.96e-01 -0.000382 0.073 0.605 NK L1
ENSG00000059758 CDK17 364514 sc-eQTL 2.39e-01 0.0426 0.0361 0.605 Other_T L1
ENSG00000074527 NTN4 973842 sc-eQTL 5.64e-01 -0.0387 0.0669 0.605 Other_T L1
ENSG00000111144 LTA4H 721474 sc-eQTL 1.93e-02 -0.176 0.0747 0.605 Other_T L1
ENSG00000111145 ELK3 570619 sc-eQTL 3.73e-01 -0.0527 0.0589 0.605 Other_T L1
ENSG00000139343 SNRPF 906066 sc-eQTL 4.33e-01 0.043 0.0548 0.605 Other_T L1
ENSG00000139350 NEDD1 -142229 sc-eQTL 6.84e-01 -0.034 0.0835 0.605 Other_T L1
ENSG00000188596 CFAP54 275423 sc-eQTL 6.85e-01 -0.0352 0.0865 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 364514 sc-eQTL 9.36e-01 -0.0068 0.085 0.592 B_Activated L2
ENSG00000111144 LTA4H 721474 sc-eQTL 7.59e-01 0.0296 0.0962 0.592 B_Activated L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.27e-01 -0.00934 0.102 0.592 B_Activated L2
ENSG00000139343 SNRPF 906066 sc-eQTL 8.81e-01 0.0144 0.0961 0.592 B_Activated L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 5.94e-01 -0.0537 0.1 0.592 B_Activated L2
ENSG00000059758 CDK17 364514 sc-eQTL 6.04e-01 0.0374 0.072 0.603 B_Intermediate L2
ENSG00000111144 LTA4H 721474 sc-eQTL 6.10e-01 0.0357 0.0697 0.603 B_Intermediate L2
ENSG00000111145 ELK3 570619 sc-eQTL 3.43e-01 -0.0746 0.0785 0.603 B_Intermediate L2
ENSG00000139343 SNRPF 906066 sc-eQTL 7.52e-01 0.0248 0.0784 0.603 B_Intermediate L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 8.86e-01 0.0132 0.0918 0.603 B_Intermediate L2
ENSG00000059758 CDK17 364514 sc-eQTL 6.10e-01 -0.0355 0.0696 0.608 B_Memory L2
ENSG00000111144 LTA4H 721474 sc-eQTL 4.60e-01 -0.0594 0.0803 0.608 B_Memory L2
ENSG00000111145 ELK3 570619 sc-eQTL 4.25e-01 0.0631 0.0789 0.608 B_Memory L2
ENSG00000139343 SNRPF 906066 sc-eQTL 3.83e-01 -0.0731 0.0836 0.608 B_Memory L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.80e-01 0.124 0.0923 0.608 B_Memory L2
ENSG00000059758 CDK17 364514 sc-eQTL 5.20e-01 0.0365 0.0567 0.605 B_Naive1 L2
ENSG00000111144 LTA4H 721474 sc-eQTL 5.19e-01 0.0383 0.0594 0.605 B_Naive1 L2
ENSG00000111145 ELK3 570619 sc-eQTL 4.76e-01 0.0501 0.0701 0.605 B_Naive1 L2
ENSG00000139343 SNRPF 906066 sc-eQTL 3.21e-01 0.0677 0.0681 0.605 B_Naive1 L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 3.88e-01 -0.0756 0.0875 0.605 B_Naive1 L2
ENSG00000059758 CDK17 364514 sc-eQTL 6.82e-02 0.133 0.0723 0.605 B_Naive2 L2
ENSG00000111144 LTA4H 721474 sc-eQTL 4.16e-01 0.0561 0.0689 0.605 B_Naive2 L2
ENSG00000111145 ELK3 570619 sc-eQTL 6.59e-01 -0.036 0.0814 0.605 B_Naive2 L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.32e-01 0.0635 0.0807 0.605 B_Naive2 L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.54e-01 -0.0719 0.096 0.605 B_Naive2 L2
ENSG00000059758 CDK17 364514 sc-eQTL 9.29e-01 -0.006 0.0673 0.609 CD4_CTL L2
ENSG00000111144 LTA4H 721474 sc-eQTL 6.44e-02 -0.175 0.0941 0.609 CD4_CTL L2
ENSG00000111145 ELK3 570619 sc-eQTL 7.84e-01 0.0263 0.096 0.609 CD4_CTL L2
ENSG00000139343 SNRPF 906066 sc-eQTL 5.86e-01 0.0455 0.0834 0.609 CD4_CTL L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 5.68e-01 -0.0551 0.0965 0.609 CD4_CTL L2
ENSG00000059758 CDK17 364514 sc-eQTL 5.92e-01 0.0219 0.0408 0.605 CD4_Naive L2
ENSG00000111144 LTA4H 721474 sc-eQTL 2.47e-01 -0.0683 0.0588 0.605 CD4_Naive L2
ENSG00000111145 ELK3 570619 sc-eQTL 4.03e-01 -0.0494 0.0589 0.605 CD4_Naive L2
ENSG00000139343 SNRPF 906066 sc-eQTL 3.56e-01 -0.0484 0.0523 0.605 CD4_Naive L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 8.03e-02 -0.113 0.0641 0.605 CD4_Naive L2
ENSG00000059758 CDK17 364514 sc-eQTL 3.73e-01 -0.0352 0.0395 0.605 CD4_TCM L2
ENSG00000111144 LTA4H 721474 sc-eQTL 4.28e-01 -0.0532 0.067 0.605 CD4_TCM L2
ENSG00000111145 ELK3 570619 sc-eQTL 4.40e-01 -0.051 0.0659 0.605 CD4_TCM L2
ENSG00000139343 SNRPF 906066 sc-eQTL 2.27e-01 -0.0653 0.054 0.605 CD4_TCM L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 7.65e-01 -0.0221 0.074 0.605 CD4_TCM L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.06e-01 0.0631 0.0498 0.605 CD4_TEM L2
ENSG00000111144 LTA4H 721474 sc-eQTL 1.33e-01 0.116 0.0767 0.605 CD4_TEM L2
ENSG00000111145 ELK3 570619 sc-eQTL 7.49e-01 0.023 0.0717 0.605 CD4_TEM L2
ENSG00000139343 SNRPF 906066 sc-eQTL 8.14e-02 -0.13 0.0745 0.605 CD4_TEM L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 6.74e-02 -0.162 0.0883 0.605 CD4_TEM L2
ENSG00000059758 CDK17 364514 sc-eQTL 5.68e-01 0.0274 0.048 0.605 CD8_CTL L2
ENSG00000111144 LTA4H 721474 sc-eQTL 6.33e-01 -0.0414 0.0867 0.605 CD8_CTL L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.47e-01 0.00529 0.079 0.605 CD8_CTL L2
ENSG00000139343 SNRPF 906066 sc-eQTL 8.49e-01 -0.0138 0.0726 0.605 CD8_CTL L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 3.58e-01 -0.0748 0.0813 0.605 CD8_CTL L2
ENSG00000059758 CDK17 364514 sc-eQTL 3.53e-01 -0.0533 0.0573 0.605 CD8_Naive L2
ENSG00000111144 LTA4H 721474 sc-eQTL 6.72e-01 0.0292 0.0688 0.605 CD8_Naive L2
ENSG00000111145 ELK3 570619 sc-eQTL 3.30e-02 -0.155 0.072 0.605 CD8_Naive L2
ENSG00000139343 SNRPF 906066 sc-eQTL 1.23e-01 0.101 0.0651 0.605 CD8_Naive L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.30e-01 -0.0616 0.0778 0.605 CD8_Naive L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.35e-01 0.0755 0.0634 0.6 CD8_TCM L2
ENSG00000111144 LTA4H 721474 sc-eQTL 8.17e-01 0.0217 0.0935 0.6 CD8_TCM L2
ENSG00000111145 ELK3 570619 sc-eQTL 5.18e-01 -0.0512 0.0791 0.6 CD8_TCM L2
ENSG00000139343 SNRPF 906066 sc-eQTL 7.29e-01 -0.0316 0.0912 0.6 CD8_TCM L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.35e-01 -0.0698 0.0891 0.6 CD8_TCM L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.07e-01 -0.0977 0.0771 0.605 CD8_TEM L2
ENSG00000111144 LTA4H 721474 sc-eQTL 8.74e-01 -0.015 0.0948 0.605 CD8_TEM L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.76e-01 0.00285 0.0932 0.605 CD8_TEM L2
ENSG00000139343 SNRPF 906066 sc-eQTL 8.10e-01 0.0208 0.0866 0.605 CD8_TEM L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 8.62e-01 -0.0164 0.094 0.605 CD8_TEM L2
ENSG00000059758 CDK17 364514 sc-eQTL 8.11e-01 -0.0125 0.0522 0.604 MAIT L2
ENSG00000074527 NTN4 973842 sc-eQTL 6.93e-01 -0.0278 0.0704 0.604 MAIT L2
ENSG00000111144 LTA4H 721474 sc-eQTL 1.25e-01 -0.124 0.0802 0.604 MAIT L2
ENSG00000111145 ELK3 570619 sc-eQTL 5.05e-01 -0.0452 0.0676 0.604 MAIT L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.99e-01 -0.0531 0.0784 0.604 MAIT L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.96e-01 -0.0601 0.088 0.604 MAIT L2
ENSG00000188596 CFAP54 275423 sc-eQTL 3.43e-01 -0.0828 0.0871 0.604 MAIT L2
ENSG00000059758 CDK17 364514 sc-eQTL 1.11e-02 0.139 0.0544 0.607 NK_CD56bright L2
ENSG00000111144 LTA4H 721474 sc-eQTL 9.06e-01 0.00964 0.0818 0.607 NK_CD56bright L2
ENSG00000111145 ELK3 570619 sc-eQTL 8.31e-01 0.0185 0.0868 0.607 NK_CD56bright L2
ENSG00000139343 SNRPF 906066 sc-eQTL 1.71e-02 0.215 0.0895 0.607 NK_CD56bright L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 6.92e-01 0.0363 0.0916 0.607 NK_CD56bright L2
ENSG00000059758 CDK17 364514 sc-eQTL 6.77e-02 0.0846 0.0461 0.608 NK_CD56dim L2
ENSG00000111144 LTA4H 721474 sc-eQTL 2.26e-01 -0.102 0.0836 0.608 NK_CD56dim L2
ENSG00000111145 ELK3 570619 sc-eQTL 7.46e-01 0.0241 0.0743 0.608 NK_CD56dim L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.46e-01 -0.0539 0.0706 0.608 NK_CD56dim L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 6.49e-01 -0.0371 0.0814 0.608 NK_CD56dim L2
ENSG00000059758 CDK17 364514 sc-eQTL 9.80e-01 -0.0018 0.072 0.61 NK_HLA L2
ENSG00000111144 LTA4H 721474 sc-eQTL 3.65e-02 -0.196 0.0933 0.61 NK_HLA L2
ENSG00000111145 ELK3 570619 sc-eQTL 1.39e-01 0.129 0.0871 0.61 NK_HLA L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.41e-02 0.183 0.0903 0.61 NK_HLA L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 2.91e-01 -0.0912 0.0861 0.61 NK_HLA L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.95e-01 0.0529 0.0504 0.608 NK_cytokine L2
ENSG00000111144 LTA4H 721474 sc-eQTL 5.17e-01 -0.0554 0.0854 0.608 NK_cytokine L2
ENSG00000111145 ELK3 570619 sc-eQTL 5.33e-01 -0.051 0.0818 0.608 NK_cytokine L2
ENSG00000139343 SNRPF 906066 sc-eQTL 3.41e-01 0.066 0.0692 0.608 NK_cytokine L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.88e-01 0.113 0.0853 0.608 NK_cytokine L2
ENSG00000059758 CDK17 364514 sc-eQTL 1.69e-01 -0.141 0.102 0.604 PB L2
ENSG00000111144 LTA4H 721474 sc-eQTL 4.40e-01 -0.0702 0.0905 0.604 PB L2
ENSG00000111145 ELK3 570619 sc-eQTL 6.29e-01 0.0563 0.116 0.604 PB L2
ENSG00000139343 SNRPF 906066 sc-eQTL 9.75e-01 0.00351 0.113 0.604 PB L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 7.88e-01 0.0362 0.135 0.604 PB L2
ENSG00000059758 CDK17 364514 sc-eQTL 9.23e-01 -0.00545 0.0566 0.6 Pro_T L2
ENSG00000074527 NTN4 973842 sc-eQTL 2.38e-01 -0.0749 0.0634 0.6 Pro_T L2
ENSG00000111144 LTA4H 721474 sc-eQTL 3.32e-01 -0.0725 0.0746 0.6 Pro_T L2
ENSG00000111145 ELK3 570619 sc-eQTL 3.43e-01 -0.0858 0.0902 0.6 Pro_T L2
ENSG00000139343 SNRPF 906066 sc-eQTL 5.96e-01 0.0303 0.057 0.6 Pro_T L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 2.54e-01 0.0944 0.0826 0.6 Pro_T L2
ENSG00000188596 CFAP54 275423 sc-eQTL 8.67e-01 0.0112 0.067 0.6 Pro_T L2
ENSG00000059758 CDK17 364514 sc-eQTL 5.52e-01 -0.0368 0.0618 0.605 Treg L2
ENSG00000111144 LTA4H 721474 sc-eQTL 4.23e-01 -0.0628 0.0782 0.605 Treg L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.73e-01 0.00237 0.0709 0.605 Treg L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.96e-01 0.056 0.082 0.605 Treg L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.70e-01 0.125 0.0912 0.605 Treg L2
ENSG00000059758 CDK17 364514 sc-eQTL 8.83e-01 0.0115 0.0782 0.598 cDC L2
ENSG00000084110 HAL 768629 sc-eQTL 3.34e-01 -0.0786 0.0811 0.598 cDC L2
ENSG00000111144 LTA4H 721474 sc-eQTL 3.37e-03 0.202 0.0681 0.598 cDC L2
ENSG00000111145 ELK3 570619 sc-eQTL 4.70e-01 -0.0666 0.0919 0.598 cDC L2
ENSG00000139343 SNRPF 906066 sc-eQTL 5.43e-01 0.0469 0.0769 0.598 cDC L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.75e-01 -0.127 0.0933 0.598 cDC L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 8.28e-01 0.0172 0.0791 0.598 cDC L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.51e-01 -0.0763 0.0663 0.605 cMono_IL1B L2
ENSG00000084110 HAL 768629 sc-eQTL 3.76e-01 0.0643 0.0724 0.605 cMono_IL1B L2
ENSG00000111144 LTA4H 721474 sc-eQTL 8.89e-02 0.133 0.0779 0.605 cMono_IL1B L2
ENSG00000111145 ELK3 570619 sc-eQTL 1.83e-01 -0.0804 0.0601 0.605 cMono_IL1B L2
ENSG00000139343 SNRPF 906066 sc-eQTL 4.72e-01 -0.0448 0.0622 0.605 cMono_IL1B L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 8.87e-03 -0.223 0.0844 0.605 cMono_IL1B L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 1.89e-02 0.187 0.079 0.605 cMono_IL1B L2
ENSG00000059758 CDK17 364514 sc-eQTL 6.93e-01 -0.0298 0.0754 0.605 cMono_S100A L2
ENSG00000084110 HAL 768629 sc-eQTL 8.72e-01 -0.0136 0.0846 0.605 cMono_S100A L2
ENSG00000111144 LTA4H 721474 sc-eQTL 1.53e-01 0.121 0.0841 0.605 cMono_S100A L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.31e-01 -0.00597 0.0689 0.605 cMono_S100A L2
ENSG00000139343 SNRPF 906066 sc-eQTL 6.36e-01 0.0322 0.068 0.605 cMono_S100A L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 7.21e-01 -0.0329 0.0918 0.605 cMono_S100A L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 7.72e-03 0.229 0.085 0.605 cMono_S100A L2
ENSG00000059758 CDK17 364514 sc-eQTL 7.18e-01 0.027 0.0749 0.603 gdT L2
ENSG00000074527 NTN4 973842 sc-eQTL 7.35e-01 0.0292 0.0859 0.603 gdT L2
ENSG00000111144 LTA4H 721474 sc-eQTL 1.25e-01 -0.172 0.111 0.603 gdT L2
ENSG00000111145 ELK3 570619 sc-eQTL 6.07e-01 0.0534 0.104 0.603 gdT L2
ENSG00000139343 SNRPF 906066 sc-eQTL 2.61e-01 0.112 0.0996 0.603 gdT L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 5.59e-01 0.0646 0.11 0.603 gdT L2
ENSG00000188596 CFAP54 275423 sc-eQTL 5.08e-01 0.0642 0.0967 0.603 gdT L2
ENSG00000059758 CDK17 364514 sc-eQTL 1.25e-01 -0.13 0.0843 0.602 intMono L2
ENSG00000084110 HAL 768629 sc-eQTL 4.93e-01 0.0588 0.0856 0.602 intMono L2
ENSG00000111144 LTA4H 721474 sc-eQTL 2.65e-01 0.0981 0.0877 0.602 intMono L2
ENSG00000111145 ELK3 570619 sc-eQTL 5.38e-01 0.0482 0.0783 0.602 intMono L2
ENSG00000139343 SNRPF 906066 sc-eQTL 1.17e-01 -0.131 0.0832 0.602 intMono L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 1.13e-01 -0.138 0.0865 0.602 intMono L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 1.75e-01 0.119 0.0871 0.602 intMono L2
ENSG00000059758 CDK17 364514 sc-eQTL 2.69e-01 0.0742 0.067 0.593 ncMono L2
ENSG00000084110 HAL 768629 sc-eQTL 5.57e-01 -0.0441 0.0749 0.593 ncMono L2
ENSG00000111144 LTA4H 721474 sc-eQTL 9.61e-01 -0.00407 0.0836 0.593 ncMono L2
ENSG00000111145 ELK3 570619 sc-eQTL 8.17e-01 -0.0166 0.0718 0.593 ncMono L2
ENSG00000139343 SNRPF 906066 sc-eQTL 1.56e-01 -0.104 0.073 0.593 ncMono L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 9.45e-01 -0.00541 0.0779 0.593 ncMono L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 7.98e-01 0.0228 0.0889 0.593 ncMono L2
ENSG00000059758 CDK17 364514 sc-eQTL 4.32e-01 -0.0686 0.0871 0.588 pDC L2
ENSG00000084110 HAL 768629 sc-eQTL 8.29e-01 -0.016 0.0737 0.588 pDC L2
ENSG00000111144 LTA4H 721474 sc-eQTL 3.13e-02 0.177 0.0813 0.588 pDC L2
ENSG00000111145 ELK3 570619 sc-eQTL 9.95e-01 0.000684 0.101 0.588 pDC L2
ENSG00000139343 SNRPF 906066 sc-eQTL 9.19e-01 0.00892 0.0881 0.588 pDC L2
ENSG00000139350 NEDD1 -142229 sc-eQTL 5.65e-01 -0.056 0.0971 0.588 pDC L2
ENSG00000257715 AC007298.1 739671 sc-eQTL 7.52e-01 0.0264 0.0833 0.588 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 364514 sc-eQTL 7.82e-01 0.0166 0.0598 0.605 B_Memory LOneK1K
ENSG00000111144 LTA4H 721474 sc-eQTL 7.89e-01 0.0166 0.0621 0.605 B_Memory LOneK1K
ENSG00000111145 ELK3 570619 sc-eQTL 7.20e-01 -0.0255 0.0709 0.605 B_Memory LOneK1K
ENSG00000139343 SNRPF 906066 sc-eQTL 9.04e-01 -0.00833 0.0688 0.605 B_Memory LOneK1K
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.56e-01 0.0673 0.0901 0.605 B_Memory LOneK1K
ENSG00000059758 CDK17 364514 sc-eQTL 1.23e-01 0.0782 0.0505 0.605 B_Naive LOneK1K
ENSG00000111144 LTA4H 721474 sc-eQTL 1.83e-01 0.0759 0.0568 0.605 B_Naive LOneK1K
ENSG00000111145 ELK3 570619 sc-eQTL 8.89e-01 -0.00905 0.0649 0.605 B_Naive LOneK1K
ENSG00000139343 SNRPF 906066 sc-eQTL 5.74e-01 0.0368 0.0653 0.605 B_Naive LOneK1K
ENSG00000139350 NEDD1 -142229 sc-eQTL 2.73e-01 -0.0949 0.0863 0.605 B_Naive LOneK1K
ENSG00000059758 CDK17 364514 sc-eQTL 2.90e-01 -0.0635 0.0598 0.605 CD14_Mono LOneK1K
ENSG00000084110 HAL 768629 sc-eQTL 9.06e-01 0.00855 0.0726 0.605 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 721474 sc-eQTL 7.36e-02 0.142 0.0791 0.605 CD14_Mono LOneK1K
ENSG00000111145 ELK3 570619 sc-eQTL 4.59e-01 -0.0427 0.0575 0.605 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 906066 sc-eQTL 6.25e-01 -0.0272 0.0556 0.605 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -142229 sc-eQTL 7.49e-02 -0.155 0.0865 0.605 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 739671 sc-eQTL 3.85e-03 0.231 0.0792 0.605 CD14_Mono LOneK1K
ENSG00000059758 CDK17 364514 sc-eQTL 7.27e-01 -0.0216 0.0618 0.606 CD16_Mono LOneK1K
ENSG00000084110 HAL 768629 sc-eQTL 9.52e-01 0.00442 0.0731 0.606 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 721474 sc-eQTL 3.67e-01 0.0731 0.0809 0.606 CD16_Mono LOneK1K
ENSG00000111145 ELK3 570619 sc-eQTL 7.35e-01 -0.0203 0.0599 0.606 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 906066 sc-eQTL 3.41e-02 -0.13 0.0612 0.606 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -142229 sc-eQTL 4.15e-01 -0.0647 0.0792 0.606 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 739671 sc-eQTL 8.20e-01 0.0191 0.0839 0.606 CD16_Mono LOneK1K
ENSG00000059758 CDK17 364514 sc-eQTL 1.17e-01 0.0682 0.0434 0.608 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 721474 sc-eQTL 3.78e-02 -0.157 0.0751 0.608 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 570619 sc-eQTL 8.53e-01 0.0129 0.0694 0.608 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 906066 sc-eQTL 8.93e-01 0.00798 0.0594 0.608 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -142229 sc-eQTL 9.41e-01 0.00549 0.0741 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -142229 eQTL 9.77e-08 -0.126 0.0234 0.0 0.0 0.388
ENSG00000188596 CFAP54 275419 eQTL 0.00064 -0.0675 0.0197 0.0 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -142229 6.69e-06 5.09e-06 5.84e-07 3.88e-06 5.12e-07 1.57e-06 2.96e-06 3.78e-07 2.88e-06 1.2e-06 3.14e-06 1.69e-06 7.43e-06 2.15e-06 1.35e-06 2.56e-06 1.98e-06 3.05e-06 1.41e-06 1e-06 2.41e-06 4.72e-06 4.62e-06 1.8e-06 4.89e-06 1.36e-06 2.1e-06 1.73e-06 4.3e-06 4.31e-06 2.02e-06 3.98e-07 7.35e-07 1.58e-06 2.03e-06 9.91e-07 1.01e-06 4.46e-07 9.86e-07 7.22e-07 4.41e-07 5.31e-06 3.65e-07 1.95e-07 3.13e-07 2.98e-07 7.69e-07 6.05e-08 1.54e-07
ENSG00000188596 CFAP54 275419 2.77e-06 2.43e-06 2.51e-07 1.98e-06 2.53e-07 6.56e-07 1.41e-06 2.04e-07 1.39e-06 3.78e-07 1.74e-06 5.97e-07 2.62e-06 3.31e-07 5.42e-07 9.54e-07 1.04e-06 1.09e-06 5.55e-07 4.58e-07 7.74e-07 1.92e-06 1.78e-06 6.23e-07 2.41e-06 7.6e-07 9.77e-07 1e-06 1.71e-06 1.68e-06 7.64e-07 7.24e-08 2.16e-07 7.27e-07 5.31e-07 4.66e-07 9.22e-07 1.24e-07 4.53e-07 3.99e-07 2.67e-07 1.86e-06 2.48e-07 1.81e-07 1.73e-07 9.85e-08 2.1e-07 0.0 6.32e-08