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Genes within 1Mb (chr12:96763066:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 362586 sc-eQTL 5.39e-01 -0.0287 0.0466 0.335 B L1
ENSG00000111144 LTA4H 719546 sc-eQTL 3.57e-01 -0.0534 0.0578 0.335 B L1
ENSG00000111145 ELK3 568691 sc-eQTL 7.00e-01 0.0238 0.0617 0.335 B L1
ENSG00000139343 SNRPF 904138 sc-eQTL 7.21e-01 0.02 0.056 0.335 B L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 2.61e-02 0.181 0.0808 0.335 B L1
ENSG00000059758 CDK17 362586 sc-eQTL 9.74e-01 -0.00129 0.0389 0.335 CD4T L1
ENSG00000111144 LTA4H 719546 sc-eQTL 4.76e-01 0.0381 0.0534 0.335 CD4T L1
ENSG00000111145 ELK3 568691 sc-eQTL 7.30e-01 0.02 0.0578 0.335 CD4T L1
ENSG00000139343 SNRPF 904138 sc-eQTL 1.32e-01 0.076 0.0503 0.335 CD4T L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 9.37e-02 0.104 0.0619 0.335 CD4T L1
ENSG00000059758 CDK17 362586 sc-eQTL 9.56e-01 0.00221 0.0398 0.335 CD8T L1
ENSG00000111144 LTA4H 719546 sc-eQTL 9.13e-01 -0.00468 0.0427 0.335 CD8T L1
ENSG00000111145 ELK3 568691 sc-eQTL 2.03e-01 0.0819 0.064 0.335 CD8T L1
ENSG00000139343 SNRPF 904138 sc-eQTL 7.17e-01 -0.0191 0.0527 0.335 CD8T L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 2.67e-01 0.0776 0.0698 0.335 CD8T L1
ENSG00000059758 CDK17 362586 sc-eQTL 8.13e-01 -0.0176 0.074 0.34 DC L1
ENSG00000084110 HAL 766701 sc-eQTL 6.13e-01 0.0427 0.0842 0.34 DC L1
ENSG00000111144 LTA4H 719546 sc-eQTL 1.39e-01 -0.102 0.0685 0.34 DC L1
ENSG00000111145 ELK3 568691 sc-eQTL 5.13e-01 0.0553 0.0843 0.34 DC L1
ENSG00000139343 SNRPF 904138 sc-eQTL 5.39e-01 -0.0431 0.0701 0.34 DC L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 7.22e-02 0.162 0.0894 0.34 DC L1
ENSG00000257715 AC007298.1 737743 sc-eQTL 5.37e-01 0.0503 0.0813 0.34 DC L1
ENSG00000059758 CDK17 362586 sc-eQTL 4.20e-01 0.0485 0.06 0.335 Mono L1
ENSG00000084110 HAL 766701 sc-eQTL 9.98e-01 0.000169 0.0756 0.335 Mono L1
ENSG00000111144 LTA4H 719546 sc-eQTL 1.13e-01 -0.135 0.0849 0.335 Mono L1
ENSG00000111145 ELK3 568691 sc-eQTL 3.06e-01 0.0587 0.0572 0.335 Mono L1
ENSG00000139343 SNRPF 904138 sc-eQTL 3.15e-01 0.0544 0.054 0.335 Mono L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.36e-02 0.143 0.0825 0.335 Mono L1
ENSG00000257715 AC007298.1 737743 sc-eQTL 6.34e-03 -0.218 0.0791 0.335 Mono L1
ENSG00000059758 CDK17 362586 sc-eQTL 7.35e-02 -0.0805 0.0447 0.335 NK L1
ENSG00000111144 LTA4H 719546 sc-eQTL 1.29e-01 0.116 0.0761 0.335 NK L1
ENSG00000111145 ELK3 568691 sc-eQTL 8.49e-01 0.0138 0.0726 0.335 NK L1
ENSG00000139343 SNRPF 904138 sc-eQTL 8.17e-01 -0.014 0.0602 0.335 NK L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.28e-01 -0.037 0.0762 0.335 NK L1
ENSG00000059758 CDK17 362586 sc-eQTL 6.22e-01 -0.0185 0.0375 0.335 Other_T L1
ENSG00000074527 NTN4 971914 sc-eQTL 7.29e-01 0.024 0.0693 0.335 Other_T L1
ENSG00000111144 LTA4H 719546 sc-eQTL 2.02e-01 0.0998 0.078 0.335 Other_T L1
ENSG00000111145 ELK3 568691 sc-eQTL 4.68e-01 0.0444 0.061 0.335 Other_T L1
ENSG00000139343 SNRPF 904138 sc-eQTL 5.17e-01 -0.0368 0.0568 0.335 Other_T L1
ENSG00000139350 NEDD1 -144157 sc-eQTL 7.40e-01 0.0287 0.0865 0.335 Other_T L1
ENSG00000188596 CFAP54 273495 sc-eQTL 9.43e-01 -0.00645 0.0896 0.335 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 362586 sc-eQTL 5.54e-01 0.0512 0.0864 0.344 B_Activated L2
ENSG00000111144 LTA4H 719546 sc-eQTL 5.67e-01 -0.056 0.0978 0.344 B_Activated L2
ENSG00000111145 ELK3 568691 sc-eQTL 9.08e-01 0.012 0.104 0.344 B_Activated L2
ENSG00000139343 SNRPF 904138 sc-eQTL 5.62e-01 -0.0567 0.0976 0.344 B_Activated L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 3.56e-01 0.0943 0.102 0.344 B_Activated L2
ENSG00000059758 CDK17 362586 sc-eQTL 5.16e-01 -0.048 0.0737 0.337 B_Intermediate L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.42e-01 -0.0835 0.0712 0.337 B_Intermediate L2
ENSG00000111145 ELK3 568691 sc-eQTL 3.27e-01 0.0789 0.0803 0.337 B_Intermediate L2
ENSG00000139343 SNRPF 904138 sc-eQTL 9.13e-01 -0.00874 0.0802 0.337 B_Intermediate L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 7.70e-01 0.0275 0.0939 0.337 B_Intermediate L2
ENSG00000059758 CDK17 362586 sc-eQTL 9.22e-01 0.00711 0.0722 0.332 B_Memory L2
ENSG00000111144 LTA4H 719546 sc-eQTL 1.46e-01 0.121 0.0829 0.332 B_Memory L2
ENSG00000111145 ELK3 568691 sc-eQTL 9.89e-01 0.00109 0.082 0.332 B_Memory L2
ENSG00000139343 SNRPF 904138 sc-eQTL 6.46e-01 0.0399 0.0868 0.332 B_Memory L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.42e-01 -0.141 0.0956 0.332 B_Memory L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.56e-01 -0.044 0.0589 0.335 B_Naive1 L2
ENSG00000111144 LTA4H 719546 sc-eQTL 4.99e-01 -0.0418 0.0617 0.335 B_Naive1 L2
ENSG00000111145 ELK3 568691 sc-eQTL 7.10e-01 -0.0271 0.073 0.335 B_Naive1 L2
ENSG00000139343 SNRPF 904138 sc-eQTL 4.90e-01 -0.0491 0.0709 0.335 B_Naive1 L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.25e-01 0.14 0.0905 0.335 B_Naive1 L2
ENSG00000059758 CDK17 362586 sc-eQTL 3.57e-01 -0.0705 0.0764 0.335 B_Naive2 L2
ENSG00000111144 LTA4H 719546 sc-eQTL 6.55e-01 -0.0324 0.0725 0.335 B_Naive2 L2
ENSG00000111145 ELK3 568691 sc-eQTL 5.85e-01 0.0467 0.0855 0.335 B_Naive2 L2
ENSG00000139343 SNRPF 904138 sc-eQTL 7.53e-01 -0.0268 0.0849 0.335 B_Naive2 L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.14e-01 0.159 0.1 0.335 B_Naive2 L2
ENSG00000059758 CDK17 362586 sc-eQTL 5.65e-01 0.04 0.0695 0.33 CD4_CTL L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.41e-01 0.115 0.0977 0.33 CD4_CTL L2
ENSG00000111145 ELK3 568691 sc-eQTL 8.11e-01 -0.0238 0.0992 0.33 CD4_CTL L2
ENSG00000139343 SNRPF 904138 sc-eQTL 7.40e-01 -0.0287 0.0862 0.33 CD4_CTL L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 2.92e-01 0.105 0.0995 0.33 CD4_CTL L2
ENSG00000059758 CDK17 362586 sc-eQTL 7.14e-01 -0.0156 0.0426 0.335 CD4_Naive L2
ENSG00000111144 LTA4H 719546 sc-eQTL 3.01e-01 0.0636 0.0614 0.335 CD4_Naive L2
ENSG00000111145 ELK3 568691 sc-eQTL 6.52e-01 0.0278 0.0616 0.335 CD4_Naive L2
ENSG00000139343 SNRPF 904138 sc-eQTL 1.97e-01 0.0705 0.0545 0.335 CD4_Naive L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.23e-02 0.125 0.0669 0.335 CD4_Naive L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.49e-01 0.0314 0.0415 0.335 CD4_TCM L2
ENSG00000111144 LTA4H 719546 sc-eQTL 4.16e-01 0.0574 0.0704 0.335 CD4_TCM L2
ENSG00000111145 ELK3 568691 sc-eQTL 8.88e-01 0.00976 0.0693 0.335 CD4_TCM L2
ENSG00000139343 SNRPF 904138 sc-eQTL 2.65e-02 0.126 0.0562 0.335 CD4_TCM L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.86e-01 -0.0112 0.0777 0.335 CD4_TCM L2
ENSG00000059758 CDK17 362586 sc-eQTL 2.34e-01 -0.0613 0.0514 0.335 CD4_TEM L2
ENSG00000111144 LTA4H 719546 sc-eQTL 1.95e-01 -0.103 0.0793 0.335 CD4_TEM L2
ENSG00000111145 ELK3 568691 sc-eQTL 8.24e-01 -0.0164 0.0739 0.335 CD4_TEM L2
ENSG00000139343 SNRPF 904138 sc-eQTL 4.65e-01 0.0566 0.0773 0.335 CD4_TEM L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.11e-02 0.171 0.091 0.335 CD4_TEM L2
ENSG00000059758 CDK17 362586 sc-eQTL 3.35e-01 -0.0481 0.0498 0.335 CD8_CTL L2
ENSG00000111144 LTA4H 719546 sc-eQTL 4.33e-01 0.0707 0.09 0.335 CD8_CTL L2
ENSG00000111145 ELK3 568691 sc-eQTL 7.62e-01 0.0249 0.082 0.335 CD8_CTL L2
ENSG00000139343 SNRPF 904138 sc-eQTL 3.66e-01 -0.0682 0.0753 0.335 CD8_CTL L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.17e-01 0.133 0.0841 0.335 CD8_CTL L2
ENSG00000059758 CDK17 362586 sc-eQTL 5.98e-01 0.0317 0.06 0.335 CD8_Naive L2
ENSG00000111144 LTA4H 719546 sc-eQTL 9.99e-01 -8.22e-05 0.0719 0.335 CD8_Naive L2
ENSG00000111145 ELK3 568691 sc-eQTL 5.51e-02 0.145 0.0754 0.335 CD8_Naive L2
ENSG00000139343 SNRPF 904138 sc-eQTL 1.74e-01 -0.093 0.0681 0.335 CD8_Naive L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 5.24e-01 0.052 0.0814 0.335 CD8_Naive L2
ENSG00000059758 CDK17 362586 sc-eQTL 2.19e-01 -0.0801 0.065 0.34 CD8_TCM L2
ENSG00000111144 LTA4H 719546 sc-eQTL 7.42e-01 0.0316 0.0958 0.34 CD8_TCM L2
ENSG00000111145 ELK3 568691 sc-eQTL 3.86e-01 0.0704 0.081 0.34 CD8_TCM L2
ENSG00000139343 SNRPF 904138 sc-eQTL 9.64e-01 0.00427 0.0935 0.34 CD8_TCM L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.17e-01 0.0212 0.0915 0.34 CD8_TCM L2
ENSG00000059758 CDK17 362586 sc-eQTL 2.86e-01 0.087 0.0813 0.338 CD8_TEM L2
ENSG00000111144 LTA4H 719546 sc-eQTL 8.40e-01 -0.0201 0.0999 0.338 CD8_TEM L2
ENSG00000111145 ELK3 568691 sc-eQTL 6.54e-01 -0.0441 0.0981 0.338 CD8_TEM L2
ENSG00000139343 SNRPF 904138 sc-eQTL 6.54e-01 -0.041 0.0912 0.338 CD8_TEM L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.14e-01 0.0234 0.099 0.338 CD8_TEM L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.14e-01 0.0445 0.0544 0.335 MAIT L2
ENSG00000074527 NTN4 971914 sc-eQTL 8.87e-01 0.0105 0.0734 0.335 MAIT L2
ENSG00000111144 LTA4H 719546 sc-eQTL 5.51e-01 0.0502 0.0841 0.335 MAIT L2
ENSG00000111145 ELK3 568691 sc-eQTL 4.70e-01 0.0511 0.0705 0.335 MAIT L2
ENSG00000139343 SNRPF 904138 sc-eQTL 7.08e-01 0.0307 0.0818 0.335 MAIT L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 9.18e-01 0.00943 0.0919 0.335 MAIT L2
ENSG00000188596 CFAP54 273495 sc-eQTL 7.48e-01 0.0292 0.091 0.335 MAIT L2
ENSG00000059758 CDK17 362586 sc-eQTL 1.45e-02 -0.14 0.0567 0.333 NK_CD56bright L2
ENSG00000111144 LTA4H 719546 sc-eQTL 7.47e-01 -0.0275 0.0851 0.333 NK_CD56bright L2
ENSG00000111145 ELK3 568691 sc-eQTL 9.75e-01 0.00279 0.0904 0.333 NK_CD56bright L2
ENSG00000139343 SNRPF 904138 sc-eQTL 2.28e-03 -0.285 0.0923 0.333 NK_CD56bright L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 4.33e-01 -0.0748 0.0952 0.333 NK_CD56bright L2
ENSG00000059758 CDK17 362586 sc-eQTL 1.24e-01 -0.0749 0.0485 0.332 NK_CD56dim L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.01e-01 0.113 0.0877 0.332 NK_CD56dim L2
ENSG00000111145 ELK3 568691 sc-eQTL 8.91e-01 -0.0107 0.078 0.332 NK_CD56dim L2
ENSG00000139343 SNRPF 904138 sc-eQTL 5.71e-01 0.0421 0.0742 0.332 NK_CD56dim L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.66e-01 0.037 0.0854 0.332 NK_CD56dim L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.39e-01 -0.0584 0.0753 0.331 NK_HLA L2
ENSG00000111144 LTA4H 719546 sc-eQTL 1.92e-01 0.129 0.0984 0.331 NK_HLA L2
ENSG00000111145 ELK3 568691 sc-eQTL 2.14e-01 -0.114 0.0913 0.331 NK_HLA L2
ENSG00000139343 SNRPF 904138 sc-eQTL 3.83e-01 -0.0834 0.0954 0.331 NK_HLA L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.99e-01 0.116 0.09 0.331 NK_HLA L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.90e-01 -0.0368 0.0533 0.332 NK_cytokine L2
ENSG00000111144 LTA4H 719546 sc-eQTL 6.81e-01 0.0371 0.0901 0.332 NK_cytokine L2
ENSG00000111145 ELK3 568691 sc-eQTL 3.21e-01 0.0857 0.0861 0.332 NK_cytokine L2
ENSG00000139343 SNRPF 904138 sc-eQTL 4.14e-01 -0.0597 0.073 0.332 NK_cytokine L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 3.75e-02 -0.187 0.0895 0.332 NK_cytokine L2
ENSG00000059758 CDK17 362586 sc-eQTL 2.02e-02 0.243 0.103 0.326 PB L2
ENSG00000111144 LTA4H 719546 sc-eQTL 6.25e-01 -0.0457 0.0932 0.326 PB L2
ENSG00000111145 ELK3 568691 sc-eQTL 6.78e-01 -0.0498 0.12 0.326 PB L2
ENSG00000139343 SNRPF 904138 sc-eQTL 3.67e-01 -0.105 0.116 0.326 PB L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 7.87e-01 0.0376 0.139 0.326 PB L2
ENSG00000059758 CDK17 362586 sc-eQTL 1.78e-01 0.079 0.0584 0.339 Pro_T L2
ENSG00000074527 NTN4 971914 sc-eQTL 1.63e-01 0.0919 0.0656 0.339 Pro_T L2
ENSG00000111144 LTA4H 719546 sc-eQTL 9.87e-01 -0.00123 0.0775 0.339 Pro_T L2
ENSG00000111145 ELK3 568691 sc-eQTL 4.90e-01 0.0647 0.0936 0.339 Pro_T L2
ENSG00000139343 SNRPF 904138 sc-eQTL 3.82e-01 -0.0517 0.059 0.339 Pro_T L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.26e-01 -0.0419 0.0858 0.339 Pro_T L2
ENSG00000188596 CFAP54 273495 sc-eQTL 7.02e-01 0.0266 0.0694 0.339 Pro_T L2
ENSG00000059758 CDK17 362586 sc-eQTL 5.95e-01 0.0341 0.064 0.335 Treg L2
ENSG00000111144 LTA4H 719546 sc-eQTL 3.94e-01 0.0692 0.081 0.335 Treg L2
ENSG00000111145 ELK3 568691 sc-eQTL 4.51e-01 -0.0555 0.0734 0.335 Treg L2
ENSG00000139343 SNRPF 904138 sc-eQTL 5.74e-01 -0.0479 0.0851 0.335 Treg L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 5.59e-01 -0.0556 0.095 0.335 Treg L2
ENSG00000059758 CDK17 362586 sc-eQTL 6.12e-01 -0.041 0.0808 0.341 cDC L2
ENSG00000084110 HAL 766701 sc-eQTL 4.34e-01 0.0657 0.0839 0.341 cDC L2
ENSG00000111144 LTA4H 719546 sc-eQTL 4.55e-02 -0.143 0.0712 0.341 cDC L2
ENSG00000111145 ELK3 568691 sc-eQTL 6.67e-01 0.041 0.095 0.341 cDC L2
ENSG00000139343 SNRPF 904138 sc-eQTL 7.32e-01 -0.0273 0.0795 0.341 cDC L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.50e-01 0.139 0.0964 0.341 cDC L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 4.84e-01 -0.0572 0.0816 0.341 cDC L2
ENSG00000059758 CDK17 362586 sc-eQTL 4.44e-02 0.138 0.0683 0.335 cMono_IL1B L2
ENSG00000084110 HAL 766701 sc-eQTL 9.32e-01 -0.00639 0.0752 0.335 cMono_IL1B L2
ENSG00000111144 LTA4H 719546 sc-eQTL 8.18e-02 -0.141 0.0807 0.335 cMono_IL1B L2
ENSG00000111145 ELK3 568691 sc-eQTL 1.25e-01 0.0958 0.0623 0.335 cMono_IL1B L2
ENSG00000139343 SNRPF 904138 sc-eQTL 5.35e-01 0.0401 0.0645 0.335 cMono_IL1B L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 5.59e-03 0.245 0.0873 0.335 cMono_IL1B L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 1.63e-02 -0.198 0.0819 0.335 cMono_IL1B L2
ENSG00000059758 CDK17 362586 sc-eQTL 3.49e-01 0.0735 0.0783 0.335 cMono_S100A L2
ENSG00000084110 HAL 766701 sc-eQTL 7.02e-01 -0.0338 0.088 0.335 cMono_S100A L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.69e-01 -0.0973 0.0877 0.335 cMono_S100A L2
ENSG00000111145 ELK3 568691 sc-eQTL 7.47e-01 0.0231 0.0716 0.335 cMono_S100A L2
ENSG00000139343 SNRPF 904138 sc-eQTL 6.21e-01 0.035 0.0708 0.335 cMono_S100A L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.03e-01 -0.0239 0.0956 0.335 cMono_S100A L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 9.46e-03 -0.232 0.0885 0.335 cMono_S100A L2
ENSG00000059758 CDK17 362586 sc-eQTL 7.10e-01 -0.0289 0.0777 0.336 gdT L2
ENSG00000074527 NTN4 971914 sc-eQTL 7.51e-01 -0.0283 0.0892 0.336 gdT L2
ENSG00000111144 LTA4H 719546 sc-eQTL 5.60e-01 0.0679 0.116 0.336 gdT L2
ENSG00000111145 ELK3 568691 sc-eQTL 9.03e-01 0.0132 0.108 0.336 gdT L2
ENSG00000139343 SNRPF 904138 sc-eQTL 4.47e-01 -0.079 0.104 0.336 gdT L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 5.19e-01 -0.0741 0.115 0.336 gdT L2
ENSG00000188596 CFAP54 273495 sc-eQTL 5.04e-01 -0.0672 0.1 0.336 gdT L2
ENSG00000059758 CDK17 362586 sc-eQTL 5.23e-01 0.0568 0.0887 0.336 intMono L2
ENSG00000084110 HAL 766701 sc-eQTL 7.65e-02 -0.159 0.0891 0.336 intMono L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.31e-01 -0.11 0.0918 0.336 intMono L2
ENSG00000111145 ELK3 568691 sc-eQTL 7.92e-01 -0.0216 0.0821 0.336 intMono L2
ENSG00000139343 SNRPF 904138 sc-eQTL 3.06e-01 0.0897 0.0875 0.336 intMono L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 8.93e-02 0.155 0.0905 0.336 intMono L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 2.43e-01 -0.107 0.0914 0.336 intMono L2
ENSG00000059758 CDK17 362586 sc-eQTL 3.33e-01 -0.0676 0.0698 0.344 ncMono L2
ENSG00000084110 HAL 766701 sc-eQTL 6.46e-01 0.0358 0.078 0.344 ncMono L2
ENSG00000111144 LTA4H 719546 sc-eQTL 9.66e-01 -0.00373 0.087 0.344 ncMono L2
ENSG00000111145 ELK3 568691 sc-eQTL 6.93e-01 0.0295 0.0747 0.344 ncMono L2
ENSG00000139343 SNRPF 904138 sc-eQTL 9.59e-01 0.0039 0.0763 0.344 ncMono L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 9.81e-01 -0.0019 0.0811 0.344 ncMono L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 5.50e-01 -0.0553 0.0924 0.344 ncMono L2
ENSG00000059758 CDK17 362586 sc-eQTL 6.34e-01 0.0433 0.0906 0.347 pDC L2
ENSG00000084110 HAL 766701 sc-eQTL 7.79e-01 0.0215 0.0766 0.347 pDC L2
ENSG00000111144 LTA4H 719546 sc-eQTL 2.45e-02 -0.192 0.0843 0.347 pDC L2
ENSG00000111145 ELK3 568691 sc-eQTL 9.37e-01 -0.00824 0.105 0.347 pDC L2
ENSG00000139343 SNRPF 904138 sc-eQTL 6.96e-01 -0.0358 0.0915 0.347 pDC L2
ENSG00000139350 NEDD1 -144157 sc-eQTL 2.08e-01 0.127 0.1 0.347 pDC L2
ENSG00000257715 AC007298.1 737743 sc-eQTL 3.73e-01 -0.0772 0.0864 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 362586 sc-eQTL 6.41e-01 -0.0288 0.0617 0.335 B_Memory LOneK1K
ENSG00000111144 LTA4H 719546 sc-eQTL 7.34e-01 -0.0218 0.0641 0.335 B_Memory LOneK1K
ENSG00000111145 ELK3 568691 sc-eQTL 4.00e-01 0.0617 0.0731 0.335 B_Memory LOneK1K
ENSG00000139343 SNRPF 904138 sc-eQTL 8.55e-01 0.013 0.071 0.335 B_Memory LOneK1K
ENSG00000139350 NEDD1 -144157 sc-eQTL 6.61e-01 -0.0408 0.093 0.335 B_Memory LOneK1K
ENSG00000059758 CDK17 362586 sc-eQTL 2.15e-01 -0.0656 0.0527 0.335 B_Naive LOneK1K
ENSG00000111144 LTA4H 719546 sc-eQTL 1.82e-01 -0.0792 0.0592 0.335 B_Naive LOneK1K
ENSG00000111145 ELK3 568691 sc-eQTL 7.53e-01 0.0213 0.0676 0.335 B_Naive LOneK1K
ENSG00000139343 SNRPF 904138 sc-eQTL 8.85e-01 -0.00986 0.0681 0.335 B_Naive LOneK1K
ENSG00000139350 NEDD1 -144157 sc-eQTL 4.33e-02 0.182 0.0893 0.335 B_Naive LOneK1K
ENSG00000059758 CDK17 362586 sc-eQTL 5.08e-02 0.121 0.0618 0.335 CD14_Mono LOneK1K
ENSG00000084110 HAL 766701 sc-eQTL 9.65e-01 0.00335 0.0755 0.335 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 719546 sc-eQTL 9.27e-02 -0.139 0.0823 0.335 CD14_Mono LOneK1K
ENSG00000111145 ELK3 568691 sc-eQTL 3.02e-01 0.0617 0.0597 0.335 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 904138 sc-eQTL 4.16e-01 0.047 0.0577 0.335 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -144157 sc-eQTL 1.29e-01 0.137 0.0901 0.335 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 737743 sc-eQTL 3.52e-03 -0.243 0.0822 0.335 CD14_Mono LOneK1K
ENSG00000059758 CDK17 362586 sc-eQTL 9.72e-01 0.0023 0.0645 0.334 CD16_Mono LOneK1K
ENSG00000084110 HAL 766701 sc-eQTL 6.29e-01 -0.0369 0.0762 0.334 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 719546 sc-eQTL 3.54e-01 -0.0784 0.0843 0.334 CD16_Mono LOneK1K
ENSG00000111145 ELK3 568691 sc-eQTL 5.69e-01 0.0356 0.0625 0.334 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 904138 sc-eQTL 3.11e-01 0.0654 0.0643 0.334 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -144157 sc-eQTL 3.53e-01 0.0768 0.0825 0.334 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 737743 sc-eQTL 7.36e-01 -0.0295 0.0875 0.334 CD16_Mono LOneK1K
ENSG00000059758 CDK17 362586 sc-eQTL 1.74e-01 -0.0621 0.0455 0.332 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 719546 sc-eQTL 4.46e-02 0.159 0.0787 0.332 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 568691 sc-eQTL 7.81e-01 0.0203 0.0727 0.332 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 904138 sc-eQTL 7.12e-01 0.023 0.0622 0.332 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -144157 sc-eQTL 5.85e-01 -0.0425 0.0776 0.332 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -144157 eQTL 4.72e-12 0.165 0.0235 0.0 0.0 0.323
ENSG00000188596 CFAP54 273491 eQTL 0.00111 0.0656 0.02 0.0 0.0 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -144157 3.39e-06 2.81e-06 4.85e-07 2e-06 6.85e-07 7.86e-07 2.22e-06 8.47e-07 2.25e-06 1.23e-06 2.57e-06 1.53e-06 4.14e-06 1.39e-06 9.13e-07 2.02e-06 1.55e-06 2.15e-06 1.42e-06 1.45e-06 1.4e-06 3.2e-06 2.69e-06 1.54e-06 4.08e-06 1.28e-06 1.44e-06 1.8e-06 2.71e-06 2.55e-06 2.01e-06 3.98e-07 5.68e-07 1.35e-06 1.45e-06 9.09e-07 9.08e-07 4.18e-07 1.37e-06 4.35e-07 2.25e-07 4.11e-06 6.19e-07 1.96e-07 3.13e-07 3.66e-07 8.61e-07 2.28e-07 1.54e-07
ENSG00000188596 CFAP54 273491 1.28e-06 9.29e-07 3.35e-07 6.94e-07 2.71e-07 4.77e-07 1.22e-06 3.54e-07 1.28e-06 4.24e-07 1.41e-06 6.03e-07 2e-06 2.59e-07 4.48e-07 8.25e-07 7.87e-07 5.76e-07 5.7e-07 6.72e-07 4.57e-07 1.27e-06 9.22e-07 6.23e-07 1.96e-06 4.28e-07 7.31e-07 6.89e-07 1.17e-06 1.22e-06 5.67e-07 1.55e-07 2.31e-07 6.35e-07 4.34e-07 4.62e-07 5.12e-07 1.7e-07 3.5e-07 1.16e-07 2.84e-07 1.62e-06 5.66e-08 4.16e-08 1.88e-07 1e-07 2.14e-07 8.8e-08 9.51e-08