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Genes within 1Mb (chr12:96759273:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358793 sc-eQTL 3.73e-01 0.04 0.0449 0.605 B L1
ENSG00000111144 LTA4H 715753 sc-eQTL 2.63e-01 0.0625 0.0557 0.605 B L1
ENSG00000111145 ELK3 564898 sc-eQTL 8.83e-01 0.00873 0.0595 0.605 B L1
ENSG00000139343 SNRPF 900345 sc-eQTL 7.45e-01 0.0176 0.054 0.605 B L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.75e-01 -0.107 0.0785 0.605 B L1
ENSG00000059758 CDK17 358793 sc-eQTL 8.98e-01 0.00475 0.0371 0.605 CD4T L1
ENSG00000111144 LTA4H 715753 sc-eQTL 4.63e-01 -0.0374 0.0509 0.605 CD4T L1
ENSG00000111145 ELK3 564898 sc-eQTL 4.02e-01 -0.0463 0.0551 0.605 CD4T L1
ENSG00000139343 SNRPF 900345 sc-eQTL 2.99e-01 -0.0502 0.0481 0.605 CD4T L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.44e-01 -0.0866 0.0591 0.605 CD4T L1
ENSG00000059758 CDK17 358793 sc-eQTL 2.52e-01 -0.0437 0.0381 0.605 CD8T L1
ENSG00000111144 LTA4H 715753 sc-eQTL 9.01e-01 0.00509 0.041 0.605 CD8T L1
ENSG00000111145 ELK3 564898 sc-eQTL 1.53e-01 -0.088 0.0614 0.605 CD8T L1
ENSG00000139343 SNRPF 900345 sc-eQTL 8.46e-01 0.00984 0.0506 0.605 CD8T L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 2.96e-01 -0.0702 0.067 0.605 CD8T L1
ENSG00000059758 CDK17 358793 sc-eQTL 7.21e-01 -0.0256 0.0717 0.601 DC L1
ENSG00000084110 HAL 762908 sc-eQTL 3.45e-01 -0.0771 0.0814 0.601 DC L1
ENSG00000111144 LTA4H 715753 sc-eQTL 3.36e-02 0.141 0.066 0.601 DC L1
ENSG00000111145 ELK3 564898 sc-eQTL 6.56e-01 -0.0365 0.0817 0.601 DC L1
ENSG00000139343 SNRPF 900345 sc-eQTL 6.32e-01 0.0325 0.0679 0.601 DC L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.15e-01 -0.137 0.0867 0.601 DC L1
ENSG00000257715 AC007298.1 733950 sc-eQTL 1.82e-01 -0.105 0.0784 0.601 DC L1
ENSG00000059758 CDK17 358793 sc-eQTL 8.24e-01 -0.0128 0.0576 0.605 Mono L1
ENSG00000084110 HAL 762908 sc-eQTL 9.89e-01 -0.000995 0.0726 0.605 Mono L1
ENSG00000111144 LTA4H 715753 sc-eQTL 1.11e-01 0.13 0.0815 0.605 Mono L1
ENSG00000111145 ELK3 564898 sc-eQTL 5.59e-01 -0.0322 0.055 0.605 Mono L1
ENSG00000139343 SNRPF 900345 sc-eQTL 2.60e-01 -0.0585 0.0517 0.605 Mono L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 8.35e-02 -0.138 0.0791 0.605 Mono L1
ENSG00000257715 AC007298.1 733950 sc-eQTL 1.23e-02 0.192 0.0761 0.605 Mono L1
ENSG00000059758 CDK17 358793 sc-eQTL 1.06e-01 0.0697 0.0429 0.605 NK L1
ENSG00000111144 LTA4H 715753 sc-eQTL 1.26e-01 -0.112 0.0729 0.605 NK L1
ENSG00000111145 ELK3 564898 sc-eQTL 8.90e-01 0.00963 0.0696 0.605 NK L1
ENSG00000139343 SNRPF 900345 sc-eQTL 6.84e-01 0.0235 0.0577 0.605 NK L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 9.96e-01 -0.000382 0.073 0.605 NK L1
ENSG00000059758 CDK17 358793 sc-eQTL 2.39e-01 0.0426 0.0361 0.605 Other_T L1
ENSG00000074527 NTN4 968121 sc-eQTL 5.64e-01 -0.0387 0.0669 0.605 Other_T L1
ENSG00000111144 LTA4H 715753 sc-eQTL 1.93e-02 -0.176 0.0747 0.605 Other_T L1
ENSG00000111145 ELK3 564898 sc-eQTL 3.73e-01 -0.0527 0.0589 0.605 Other_T L1
ENSG00000139343 SNRPF 900345 sc-eQTL 4.33e-01 0.043 0.0548 0.605 Other_T L1
ENSG00000139350 NEDD1 -147950 sc-eQTL 6.84e-01 -0.034 0.0835 0.605 Other_T L1
ENSG00000188596 CFAP54 269702 sc-eQTL 6.85e-01 -0.0352 0.0865 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358793 sc-eQTL 9.36e-01 -0.0068 0.085 0.592 B_Activated L2
ENSG00000111144 LTA4H 715753 sc-eQTL 7.59e-01 0.0296 0.0962 0.592 B_Activated L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.27e-01 -0.00934 0.102 0.592 B_Activated L2
ENSG00000139343 SNRPF 900345 sc-eQTL 8.81e-01 0.0144 0.0961 0.592 B_Activated L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 5.94e-01 -0.0537 0.1 0.592 B_Activated L2
ENSG00000059758 CDK17 358793 sc-eQTL 6.04e-01 0.0374 0.072 0.603 B_Intermediate L2
ENSG00000111144 LTA4H 715753 sc-eQTL 6.10e-01 0.0357 0.0697 0.603 B_Intermediate L2
ENSG00000111145 ELK3 564898 sc-eQTL 3.43e-01 -0.0746 0.0785 0.603 B_Intermediate L2
ENSG00000139343 SNRPF 900345 sc-eQTL 7.52e-01 0.0248 0.0784 0.603 B_Intermediate L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 8.86e-01 0.0132 0.0918 0.603 B_Intermediate L2
ENSG00000059758 CDK17 358793 sc-eQTL 6.10e-01 -0.0355 0.0696 0.608 B_Memory L2
ENSG00000111144 LTA4H 715753 sc-eQTL 4.60e-01 -0.0594 0.0803 0.608 B_Memory L2
ENSG00000111145 ELK3 564898 sc-eQTL 4.25e-01 0.0631 0.0789 0.608 B_Memory L2
ENSG00000139343 SNRPF 900345 sc-eQTL 3.83e-01 -0.0731 0.0836 0.608 B_Memory L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.80e-01 0.124 0.0923 0.608 B_Memory L2
ENSG00000059758 CDK17 358793 sc-eQTL 5.20e-01 0.0365 0.0567 0.605 B_Naive1 L2
ENSG00000111144 LTA4H 715753 sc-eQTL 5.19e-01 0.0383 0.0594 0.605 B_Naive1 L2
ENSG00000111145 ELK3 564898 sc-eQTL 4.76e-01 0.0501 0.0701 0.605 B_Naive1 L2
ENSG00000139343 SNRPF 900345 sc-eQTL 3.21e-01 0.0677 0.0681 0.605 B_Naive1 L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 3.88e-01 -0.0756 0.0875 0.605 B_Naive1 L2
ENSG00000059758 CDK17 358793 sc-eQTL 6.82e-02 0.133 0.0723 0.605 B_Naive2 L2
ENSG00000111144 LTA4H 715753 sc-eQTL 4.16e-01 0.0561 0.0689 0.605 B_Naive2 L2
ENSG00000111145 ELK3 564898 sc-eQTL 6.59e-01 -0.036 0.0814 0.605 B_Naive2 L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.32e-01 0.0635 0.0807 0.605 B_Naive2 L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.54e-01 -0.0719 0.096 0.605 B_Naive2 L2
ENSG00000059758 CDK17 358793 sc-eQTL 9.29e-01 -0.006 0.0673 0.609 CD4_CTL L2
ENSG00000111144 LTA4H 715753 sc-eQTL 6.44e-02 -0.175 0.0941 0.609 CD4_CTL L2
ENSG00000111145 ELK3 564898 sc-eQTL 7.84e-01 0.0263 0.096 0.609 CD4_CTL L2
ENSG00000139343 SNRPF 900345 sc-eQTL 5.86e-01 0.0455 0.0834 0.609 CD4_CTL L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 5.68e-01 -0.0551 0.0965 0.609 CD4_CTL L2
ENSG00000059758 CDK17 358793 sc-eQTL 5.92e-01 0.0219 0.0408 0.605 CD4_Naive L2
ENSG00000111144 LTA4H 715753 sc-eQTL 2.47e-01 -0.0683 0.0588 0.605 CD4_Naive L2
ENSG00000111145 ELK3 564898 sc-eQTL 4.03e-01 -0.0494 0.0589 0.605 CD4_Naive L2
ENSG00000139343 SNRPF 900345 sc-eQTL 3.56e-01 -0.0484 0.0523 0.605 CD4_Naive L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 8.03e-02 -0.113 0.0641 0.605 CD4_Naive L2
ENSG00000059758 CDK17 358793 sc-eQTL 3.73e-01 -0.0352 0.0395 0.605 CD4_TCM L2
ENSG00000111144 LTA4H 715753 sc-eQTL 4.28e-01 -0.0532 0.067 0.605 CD4_TCM L2
ENSG00000111145 ELK3 564898 sc-eQTL 4.40e-01 -0.051 0.0659 0.605 CD4_TCM L2
ENSG00000139343 SNRPF 900345 sc-eQTL 2.27e-01 -0.0653 0.054 0.605 CD4_TCM L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 7.65e-01 -0.0221 0.074 0.605 CD4_TCM L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.06e-01 0.0631 0.0498 0.605 CD4_TEM L2
ENSG00000111144 LTA4H 715753 sc-eQTL 1.33e-01 0.116 0.0767 0.605 CD4_TEM L2
ENSG00000111145 ELK3 564898 sc-eQTL 7.49e-01 0.023 0.0717 0.605 CD4_TEM L2
ENSG00000139343 SNRPF 900345 sc-eQTL 8.14e-02 -0.13 0.0745 0.605 CD4_TEM L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 6.74e-02 -0.162 0.0883 0.605 CD4_TEM L2
ENSG00000059758 CDK17 358793 sc-eQTL 5.68e-01 0.0274 0.048 0.605 CD8_CTL L2
ENSG00000111144 LTA4H 715753 sc-eQTL 6.33e-01 -0.0414 0.0867 0.605 CD8_CTL L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.47e-01 0.00529 0.079 0.605 CD8_CTL L2
ENSG00000139343 SNRPF 900345 sc-eQTL 8.49e-01 -0.0138 0.0726 0.605 CD8_CTL L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 3.58e-01 -0.0748 0.0813 0.605 CD8_CTL L2
ENSG00000059758 CDK17 358793 sc-eQTL 3.53e-01 -0.0533 0.0573 0.605 CD8_Naive L2
ENSG00000111144 LTA4H 715753 sc-eQTL 6.72e-01 0.0292 0.0688 0.605 CD8_Naive L2
ENSG00000111145 ELK3 564898 sc-eQTL 3.30e-02 -0.155 0.072 0.605 CD8_Naive L2
ENSG00000139343 SNRPF 900345 sc-eQTL 1.23e-01 0.101 0.0651 0.605 CD8_Naive L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.30e-01 -0.0616 0.0778 0.605 CD8_Naive L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.35e-01 0.0755 0.0634 0.6 CD8_TCM L2
ENSG00000111144 LTA4H 715753 sc-eQTL 8.17e-01 0.0217 0.0935 0.6 CD8_TCM L2
ENSG00000111145 ELK3 564898 sc-eQTL 5.18e-01 -0.0512 0.0791 0.6 CD8_TCM L2
ENSG00000139343 SNRPF 900345 sc-eQTL 7.29e-01 -0.0316 0.0912 0.6 CD8_TCM L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.35e-01 -0.0698 0.0891 0.6 CD8_TCM L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.07e-01 -0.0977 0.0771 0.605 CD8_TEM L2
ENSG00000111144 LTA4H 715753 sc-eQTL 8.74e-01 -0.015 0.0948 0.605 CD8_TEM L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.76e-01 0.00285 0.0932 0.605 CD8_TEM L2
ENSG00000139343 SNRPF 900345 sc-eQTL 8.10e-01 0.0208 0.0866 0.605 CD8_TEM L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 8.62e-01 -0.0164 0.094 0.605 CD8_TEM L2
ENSG00000059758 CDK17 358793 sc-eQTL 8.11e-01 -0.0125 0.0522 0.604 MAIT L2
ENSG00000074527 NTN4 968121 sc-eQTL 6.93e-01 -0.0278 0.0704 0.604 MAIT L2
ENSG00000111144 LTA4H 715753 sc-eQTL 1.25e-01 -0.124 0.0802 0.604 MAIT L2
ENSG00000111145 ELK3 564898 sc-eQTL 5.05e-01 -0.0452 0.0676 0.604 MAIT L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.99e-01 -0.0531 0.0784 0.604 MAIT L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.96e-01 -0.0601 0.088 0.604 MAIT L2
ENSG00000188596 CFAP54 269702 sc-eQTL 3.43e-01 -0.0828 0.0871 0.604 MAIT L2
ENSG00000059758 CDK17 358793 sc-eQTL 1.11e-02 0.139 0.0544 0.607 NK_CD56bright L2
ENSG00000111144 LTA4H 715753 sc-eQTL 9.06e-01 0.00964 0.0818 0.607 NK_CD56bright L2
ENSG00000111145 ELK3 564898 sc-eQTL 8.31e-01 0.0185 0.0868 0.607 NK_CD56bright L2
ENSG00000139343 SNRPF 900345 sc-eQTL 1.71e-02 0.215 0.0895 0.607 NK_CD56bright L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 6.92e-01 0.0363 0.0916 0.607 NK_CD56bright L2
ENSG00000059758 CDK17 358793 sc-eQTL 6.77e-02 0.0846 0.0461 0.608 NK_CD56dim L2
ENSG00000111144 LTA4H 715753 sc-eQTL 2.26e-01 -0.102 0.0836 0.608 NK_CD56dim L2
ENSG00000111145 ELK3 564898 sc-eQTL 7.46e-01 0.0241 0.0743 0.608 NK_CD56dim L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.46e-01 -0.0539 0.0706 0.608 NK_CD56dim L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 6.49e-01 -0.0371 0.0814 0.608 NK_CD56dim L2
ENSG00000059758 CDK17 358793 sc-eQTL 9.80e-01 -0.0018 0.072 0.61 NK_HLA L2
ENSG00000111144 LTA4H 715753 sc-eQTL 3.65e-02 -0.196 0.0933 0.61 NK_HLA L2
ENSG00000111145 ELK3 564898 sc-eQTL 1.39e-01 0.129 0.0871 0.61 NK_HLA L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.41e-02 0.183 0.0903 0.61 NK_HLA L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 2.91e-01 -0.0912 0.0861 0.61 NK_HLA L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.95e-01 0.0529 0.0504 0.608 NK_cytokine L2
ENSG00000111144 LTA4H 715753 sc-eQTL 5.17e-01 -0.0554 0.0854 0.608 NK_cytokine L2
ENSG00000111145 ELK3 564898 sc-eQTL 5.33e-01 -0.051 0.0818 0.608 NK_cytokine L2
ENSG00000139343 SNRPF 900345 sc-eQTL 3.41e-01 0.066 0.0692 0.608 NK_cytokine L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.88e-01 0.113 0.0853 0.608 NK_cytokine L2
ENSG00000059758 CDK17 358793 sc-eQTL 1.69e-01 -0.141 0.102 0.604 PB L2
ENSG00000111144 LTA4H 715753 sc-eQTL 4.40e-01 -0.0702 0.0905 0.604 PB L2
ENSG00000111145 ELK3 564898 sc-eQTL 6.29e-01 0.0563 0.116 0.604 PB L2
ENSG00000139343 SNRPF 900345 sc-eQTL 9.75e-01 0.00351 0.113 0.604 PB L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 7.88e-01 0.0362 0.135 0.604 PB L2
ENSG00000059758 CDK17 358793 sc-eQTL 9.23e-01 -0.00545 0.0566 0.6 Pro_T L2
ENSG00000074527 NTN4 968121 sc-eQTL 2.38e-01 -0.0749 0.0634 0.6 Pro_T L2
ENSG00000111144 LTA4H 715753 sc-eQTL 3.32e-01 -0.0725 0.0746 0.6 Pro_T L2
ENSG00000111145 ELK3 564898 sc-eQTL 3.43e-01 -0.0858 0.0902 0.6 Pro_T L2
ENSG00000139343 SNRPF 900345 sc-eQTL 5.96e-01 0.0303 0.057 0.6 Pro_T L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 2.54e-01 0.0944 0.0826 0.6 Pro_T L2
ENSG00000188596 CFAP54 269702 sc-eQTL 8.67e-01 0.0112 0.067 0.6 Pro_T L2
ENSG00000059758 CDK17 358793 sc-eQTL 5.52e-01 -0.0368 0.0618 0.605 Treg L2
ENSG00000111144 LTA4H 715753 sc-eQTL 4.23e-01 -0.0628 0.0782 0.605 Treg L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.73e-01 0.00237 0.0709 0.605 Treg L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.96e-01 0.056 0.082 0.605 Treg L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.70e-01 0.125 0.0912 0.605 Treg L2
ENSG00000059758 CDK17 358793 sc-eQTL 8.83e-01 0.0115 0.0782 0.598 cDC L2
ENSG00000084110 HAL 762908 sc-eQTL 3.34e-01 -0.0786 0.0811 0.598 cDC L2
ENSG00000111144 LTA4H 715753 sc-eQTL 3.37e-03 0.202 0.0681 0.598 cDC L2
ENSG00000111145 ELK3 564898 sc-eQTL 4.70e-01 -0.0666 0.0919 0.598 cDC L2
ENSG00000139343 SNRPF 900345 sc-eQTL 5.43e-01 0.0469 0.0769 0.598 cDC L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.75e-01 -0.127 0.0933 0.598 cDC L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 8.28e-01 0.0172 0.0791 0.598 cDC L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.51e-01 -0.0763 0.0663 0.605 cMono_IL1B L2
ENSG00000084110 HAL 762908 sc-eQTL 3.76e-01 0.0643 0.0724 0.605 cMono_IL1B L2
ENSG00000111144 LTA4H 715753 sc-eQTL 8.89e-02 0.133 0.0779 0.605 cMono_IL1B L2
ENSG00000111145 ELK3 564898 sc-eQTL 1.83e-01 -0.0804 0.0601 0.605 cMono_IL1B L2
ENSG00000139343 SNRPF 900345 sc-eQTL 4.72e-01 -0.0448 0.0622 0.605 cMono_IL1B L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 8.87e-03 -0.223 0.0844 0.605 cMono_IL1B L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 1.89e-02 0.187 0.079 0.605 cMono_IL1B L2
ENSG00000059758 CDK17 358793 sc-eQTL 6.93e-01 -0.0298 0.0754 0.605 cMono_S100A L2
ENSG00000084110 HAL 762908 sc-eQTL 8.72e-01 -0.0136 0.0846 0.605 cMono_S100A L2
ENSG00000111144 LTA4H 715753 sc-eQTL 1.53e-01 0.121 0.0841 0.605 cMono_S100A L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.31e-01 -0.00597 0.0689 0.605 cMono_S100A L2
ENSG00000139343 SNRPF 900345 sc-eQTL 6.36e-01 0.0322 0.068 0.605 cMono_S100A L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 7.21e-01 -0.0329 0.0918 0.605 cMono_S100A L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 7.72e-03 0.229 0.085 0.605 cMono_S100A L2
ENSG00000059758 CDK17 358793 sc-eQTL 7.18e-01 0.027 0.0749 0.603 gdT L2
ENSG00000074527 NTN4 968121 sc-eQTL 7.35e-01 0.0292 0.0859 0.603 gdT L2
ENSG00000111144 LTA4H 715753 sc-eQTL 1.25e-01 -0.172 0.111 0.603 gdT L2
ENSG00000111145 ELK3 564898 sc-eQTL 6.07e-01 0.0534 0.104 0.603 gdT L2
ENSG00000139343 SNRPF 900345 sc-eQTL 2.61e-01 0.112 0.0996 0.603 gdT L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 5.59e-01 0.0646 0.11 0.603 gdT L2
ENSG00000188596 CFAP54 269702 sc-eQTL 5.08e-01 0.0642 0.0967 0.603 gdT L2
ENSG00000059758 CDK17 358793 sc-eQTL 1.25e-01 -0.13 0.0843 0.602 intMono L2
ENSG00000084110 HAL 762908 sc-eQTL 4.93e-01 0.0588 0.0856 0.602 intMono L2
ENSG00000111144 LTA4H 715753 sc-eQTL 2.65e-01 0.0981 0.0877 0.602 intMono L2
ENSG00000111145 ELK3 564898 sc-eQTL 5.38e-01 0.0482 0.0783 0.602 intMono L2
ENSG00000139343 SNRPF 900345 sc-eQTL 1.17e-01 -0.131 0.0832 0.602 intMono L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 1.13e-01 -0.138 0.0865 0.602 intMono L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 1.75e-01 0.119 0.0871 0.602 intMono L2
ENSG00000059758 CDK17 358793 sc-eQTL 2.69e-01 0.0742 0.067 0.593 ncMono L2
ENSG00000084110 HAL 762908 sc-eQTL 5.57e-01 -0.0441 0.0749 0.593 ncMono L2
ENSG00000111144 LTA4H 715753 sc-eQTL 9.61e-01 -0.00407 0.0836 0.593 ncMono L2
ENSG00000111145 ELK3 564898 sc-eQTL 8.17e-01 -0.0166 0.0718 0.593 ncMono L2
ENSG00000139343 SNRPF 900345 sc-eQTL 1.56e-01 -0.104 0.073 0.593 ncMono L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 9.45e-01 -0.00541 0.0779 0.593 ncMono L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 7.98e-01 0.0228 0.0889 0.593 ncMono L2
ENSG00000059758 CDK17 358793 sc-eQTL 4.32e-01 -0.0686 0.0871 0.588 pDC L2
ENSG00000084110 HAL 762908 sc-eQTL 8.29e-01 -0.016 0.0737 0.588 pDC L2
ENSG00000111144 LTA4H 715753 sc-eQTL 3.13e-02 0.177 0.0813 0.588 pDC L2
ENSG00000111145 ELK3 564898 sc-eQTL 9.95e-01 0.000684 0.101 0.588 pDC L2
ENSG00000139343 SNRPF 900345 sc-eQTL 9.19e-01 0.00892 0.0881 0.588 pDC L2
ENSG00000139350 NEDD1 -147950 sc-eQTL 5.65e-01 -0.056 0.0971 0.588 pDC L2
ENSG00000257715 AC007298.1 733950 sc-eQTL 7.52e-01 0.0264 0.0833 0.588 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358793 sc-eQTL 7.82e-01 0.0166 0.0598 0.605 B_Memory LOneK1K
ENSG00000111144 LTA4H 715753 sc-eQTL 7.89e-01 0.0166 0.0621 0.605 B_Memory LOneK1K
ENSG00000111145 ELK3 564898 sc-eQTL 7.20e-01 -0.0255 0.0709 0.605 B_Memory LOneK1K
ENSG00000139343 SNRPF 900345 sc-eQTL 9.04e-01 -0.00833 0.0688 0.605 B_Memory LOneK1K
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.56e-01 0.0673 0.0901 0.605 B_Memory LOneK1K
ENSG00000059758 CDK17 358793 sc-eQTL 1.23e-01 0.0782 0.0505 0.605 B_Naive LOneK1K
ENSG00000111144 LTA4H 715753 sc-eQTL 1.83e-01 0.0759 0.0568 0.605 B_Naive LOneK1K
ENSG00000111145 ELK3 564898 sc-eQTL 8.89e-01 -0.00905 0.0649 0.605 B_Naive LOneK1K
ENSG00000139343 SNRPF 900345 sc-eQTL 5.74e-01 0.0368 0.0653 0.605 B_Naive LOneK1K
ENSG00000139350 NEDD1 -147950 sc-eQTL 2.73e-01 -0.0949 0.0863 0.605 B_Naive LOneK1K
ENSG00000059758 CDK17 358793 sc-eQTL 2.90e-01 -0.0635 0.0598 0.605 CD14_Mono LOneK1K
ENSG00000084110 HAL 762908 sc-eQTL 9.06e-01 0.00855 0.0726 0.605 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 715753 sc-eQTL 7.36e-02 0.142 0.0791 0.605 CD14_Mono LOneK1K
ENSG00000111145 ELK3 564898 sc-eQTL 4.59e-01 -0.0427 0.0575 0.605 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 900345 sc-eQTL 6.25e-01 -0.0272 0.0556 0.605 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -147950 sc-eQTL 7.49e-02 -0.155 0.0865 0.605 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 733950 sc-eQTL 3.85e-03 0.231 0.0792 0.605 CD14_Mono LOneK1K
ENSG00000059758 CDK17 358793 sc-eQTL 7.27e-01 -0.0216 0.0618 0.606 CD16_Mono LOneK1K
ENSG00000084110 HAL 762908 sc-eQTL 9.52e-01 0.00442 0.0731 0.606 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 715753 sc-eQTL 3.67e-01 0.0731 0.0809 0.606 CD16_Mono LOneK1K
ENSG00000111145 ELK3 564898 sc-eQTL 7.35e-01 -0.0203 0.0599 0.606 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 900345 sc-eQTL 3.41e-02 -0.13 0.0612 0.606 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -147950 sc-eQTL 4.15e-01 -0.0647 0.0792 0.606 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 733950 sc-eQTL 8.20e-01 0.0191 0.0839 0.606 CD16_Mono LOneK1K
ENSG00000059758 CDK17 358793 sc-eQTL 1.17e-01 0.0682 0.0434 0.608 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 715753 sc-eQTL 3.78e-02 -0.157 0.0751 0.608 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 564898 sc-eQTL 8.53e-01 0.0129 0.0694 0.608 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 900345 sc-eQTL 8.93e-01 0.00798 0.0594 0.608 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -147950 sc-eQTL 9.41e-01 0.00549 0.0741 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -147950 eQTL 1.03e-07 -0.125 0.0234 0.0 0.0 0.388
ENSG00000188596 CFAP54 269698 eQTL 0.000652 -0.0673 0.0197 0.0 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -147950 4.01e-06 3.65e-06 6.94e-07 1.96e-06 1.06e-06 8.22e-07 2.41e-06 9.98e-07 2.78e-06 1.65e-06 3.36e-06 2.13e-06 5.39e-06 1.24e-06 9.92e-07 2.23e-06 1.75e-06 2.38e-06 1.42e-06 9.17e-07 1.97e-06 3.5e-06 3.17e-06 1.85e-06 4.49e-06 1.27e-06 1.82e-06 1.5e-06 3.81e-06 3.1e-06 1.97e-06 5.43e-07 7.75e-07 1.74e-06 1.91e-06 8.53e-07 9.21e-07 4.71e-07 1.32e-06 3.63e-07 4.59e-07 3.92e-06 4.6e-07 1.86e-07 4.38e-07 3.22e-07 6.79e-07 2.26e-07 3.24e-07
ENSG00000188596 CFAP54 269698 1.28e-06 1.01e-06 3.06e-07 1.1e-06 3.67e-07 6.02e-07 1.58e-06 3.99e-07 1.4e-06 6.18e-07 1.87e-06 7.63e-07 2.29e-06 2.63e-07 5.36e-07 9.57e-07 8.82e-07 8.82e-07 8.2e-07 5.15e-07 8.02e-07 1.69e-06 8.89e-07 5.41e-07 2.19e-06 7.38e-07 9.31e-07 8.53e-07 1.48e-06 1.21e-06 7.1e-07 3.01e-07 2.65e-07 6.24e-07 5.2e-07 4.57e-07 6.81e-07 2.47e-07 4.94e-07 3.02e-07 2.59e-07 1.65e-06 1.39e-07 6.53e-08 2.99e-07 1.73e-07 2.29e-07 5.98e-08 2.04e-07