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Genes within 1Mb (chr12:96758927:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358447 sc-eQTL 3.73e-01 0.04 0.0449 0.605 B L1
ENSG00000111144 LTA4H 715407 sc-eQTL 2.63e-01 0.0625 0.0557 0.605 B L1
ENSG00000111145 ELK3 564552 sc-eQTL 8.83e-01 0.00873 0.0595 0.605 B L1
ENSG00000139343 SNRPF 899999 sc-eQTL 7.45e-01 0.0176 0.054 0.605 B L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.75e-01 -0.107 0.0785 0.605 B L1
ENSG00000059758 CDK17 358447 sc-eQTL 8.98e-01 0.00475 0.0371 0.605 CD4T L1
ENSG00000111144 LTA4H 715407 sc-eQTL 4.63e-01 -0.0374 0.0509 0.605 CD4T L1
ENSG00000111145 ELK3 564552 sc-eQTL 4.02e-01 -0.0463 0.0551 0.605 CD4T L1
ENSG00000139343 SNRPF 899999 sc-eQTL 2.99e-01 -0.0502 0.0481 0.605 CD4T L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.44e-01 -0.0866 0.0591 0.605 CD4T L1
ENSG00000059758 CDK17 358447 sc-eQTL 2.52e-01 -0.0437 0.0381 0.605 CD8T L1
ENSG00000111144 LTA4H 715407 sc-eQTL 9.01e-01 0.00509 0.041 0.605 CD8T L1
ENSG00000111145 ELK3 564552 sc-eQTL 1.53e-01 -0.088 0.0614 0.605 CD8T L1
ENSG00000139343 SNRPF 899999 sc-eQTL 8.46e-01 0.00984 0.0506 0.605 CD8T L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 2.96e-01 -0.0702 0.067 0.605 CD8T L1
ENSG00000059758 CDK17 358447 sc-eQTL 7.21e-01 -0.0256 0.0717 0.601 DC L1
ENSG00000084110 HAL 762562 sc-eQTL 3.45e-01 -0.0771 0.0814 0.601 DC L1
ENSG00000111144 LTA4H 715407 sc-eQTL 3.36e-02 0.141 0.066 0.601 DC L1
ENSG00000111145 ELK3 564552 sc-eQTL 6.56e-01 -0.0365 0.0817 0.601 DC L1
ENSG00000139343 SNRPF 899999 sc-eQTL 6.32e-01 0.0325 0.0679 0.601 DC L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.15e-01 -0.137 0.0867 0.601 DC L1
ENSG00000257715 AC007298.1 733604 sc-eQTL 1.82e-01 -0.105 0.0784 0.601 DC L1
ENSG00000059758 CDK17 358447 sc-eQTL 8.24e-01 -0.0128 0.0576 0.605 Mono L1
ENSG00000084110 HAL 762562 sc-eQTL 9.89e-01 -0.000995 0.0726 0.605 Mono L1
ENSG00000111144 LTA4H 715407 sc-eQTL 1.11e-01 0.13 0.0815 0.605 Mono L1
ENSG00000111145 ELK3 564552 sc-eQTL 5.59e-01 -0.0322 0.055 0.605 Mono L1
ENSG00000139343 SNRPF 899999 sc-eQTL 2.60e-01 -0.0585 0.0517 0.605 Mono L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 8.35e-02 -0.138 0.0791 0.605 Mono L1
ENSG00000257715 AC007298.1 733604 sc-eQTL 1.23e-02 0.192 0.0761 0.605 Mono L1
ENSG00000059758 CDK17 358447 sc-eQTL 1.06e-01 0.0697 0.0429 0.605 NK L1
ENSG00000111144 LTA4H 715407 sc-eQTL 1.26e-01 -0.112 0.0729 0.605 NK L1
ENSG00000111145 ELK3 564552 sc-eQTL 8.90e-01 0.00963 0.0696 0.605 NK L1
ENSG00000139343 SNRPF 899999 sc-eQTL 6.84e-01 0.0235 0.0577 0.605 NK L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 9.96e-01 -0.000382 0.073 0.605 NK L1
ENSG00000059758 CDK17 358447 sc-eQTL 2.39e-01 0.0426 0.0361 0.605 Other_T L1
ENSG00000074527 NTN4 967775 sc-eQTL 5.64e-01 -0.0387 0.0669 0.605 Other_T L1
ENSG00000111144 LTA4H 715407 sc-eQTL 1.93e-02 -0.176 0.0747 0.605 Other_T L1
ENSG00000111145 ELK3 564552 sc-eQTL 3.73e-01 -0.0527 0.0589 0.605 Other_T L1
ENSG00000139343 SNRPF 899999 sc-eQTL 4.33e-01 0.043 0.0548 0.605 Other_T L1
ENSG00000139350 NEDD1 -148296 sc-eQTL 6.84e-01 -0.034 0.0835 0.605 Other_T L1
ENSG00000188596 CFAP54 269356 sc-eQTL 6.85e-01 -0.0352 0.0865 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358447 sc-eQTL 9.36e-01 -0.0068 0.085 0.592 B_Activated L2
ENSG00000111144 LTA4H 715407 sc-eQTL 7.59e-01 0.0296 0.0962 0.592 B_Activated L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.27e-01 -0.00934 0.102 0.592 B_Activated L2
ENSG00000139343 SNRPF 899999 sc-eQTL 8.81e-01 0.0144 0.0961 0.592 B_Activated L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 5.94e-01 -0.0537 0.1 0.592 B_Activated L2
ENSG00000059758 CDK17 358447 sc-eQTL 6.04e-01 0.0374 0.072 0.603 B_Intermediate L2
ENSG00000111144 LTA4H 715407 sc-eQTL 6.10e-01 0.0357 0.0697 0.603 B_Intermediate L2
ENSG00000111145 ELK3 564552 sc-eQTL 3.43e-01 -0.0746 0.0785 0.603 B_Intermediate L2
ENSG00000139343 SNRPF 899999 sc-eQTL 7.52e-01 0.0248 0.0784 0.603 B_Intermediate L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 8.86e-01 0.0132 0.0918 0.603 B_Intermediate L2
ENSG00000059758 CDK17 358447 sc-eQTL 6.10e-01 -0.0355 0.0696 0.608 B_Memory L2
ENSG00000111144 LTA4H 715407 sc-eQTL 4.60e-01 -0.0594 0.0803 0.608 B_Memory L2
ENSG00000111145 ELK3 564552 sc-eQTL 4.25e-01 0.0631 0.0789 0.608 B_Memory L2
ENSG00000139343 SNRPF 899999 sc-eQTL 3.83e-01 -0.0731 0.0836 0.608 B_Memory L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.80e-01 0.124 0.0923 0.608 B_Memory L2
ENSG00000059758 CDK17 358447 sc-eQTL 5.20e-01 0.0365 0.0567 0.605 B_Naive1 L2
ENSG00000111144 LTA4H 715407 sc-eQTL 5.19e-01 0.0383 0.0594 0.605 B_Naive1 L2
ENSG00000111145 ELK3 564552 sc-eQTL 4.76e-01 0.0501 0.0701 0.605 B_Naive1 L2
ENSG00000139343 SNRPF 899999 sc-eQTL 3.21e-01 0.0677 0.0681 0.605 B_Naive1 L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 3.88e-01 -0.0756 0.0875 0.605 B_Naive1 L2
ENSG00000059758 CDK17 358447 sc-eQTL 6.82e-02 0.133 0.0723 0.605 B_Naive2 L2
ENSG00000111144 LTA4H 715407 sc-eQTL 4.16e-01 0.0561 0.0689 0.605 B_Naive2 L2
ENSG00000111145 ELK3 564552 sc-eQTL 6.59e-01 -0.036 0.0814 0.605 B_Naive2 L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.32e-01 0.0635 0.0807 0.605 B_Naive2 L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.54e-01 -0.0719 0.096 0.605 B_Naive2 L2
ENSG00000059758 CDK17 358447 sc-eQTL 9.29e-01 -0.006 0.0673 0.609 CD4_CTL L2
ENSG00000111144 LTA4H 715407 sc-eQTL 6.44e-02 -0.175 0.0941 0.609 CD4_CTL L2
ENSG00000111145 ELK3 564552 sc-eQTL 7.84e-01 0.0263 0.096 0.609 CD4_CTL L2
ENSG00000139343 SNRPF 899999 sc-eQTL 5.86e-01 0.0455 0.0834 0.609 CD4_CTL L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 5.68e-01 -0.0551 0.0965 0.609 CD4_CTL L2
ENSG00000059758 CDK17 358447 sc-eQTL 5.92e-01 0.0219 0.0408 0.605 CD4_Naive L2
ENSG00000111144 LTA4H 715407 sc-eQTL 2.47e-01 -0.0683 0.0588 0.605 CD4_Naive L2
ENSG00000111145 ELK3 564552 sc-eQTL 4.03e-01 -0.0494 0.0589 0.605 CD4_Naive L2
ENSG00000139343 SNRPF 899999 sc-eQTL 3.56e-01 -0.0484 0.0523 0.605 CD4_Naive L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 8.03e-02 -0.113 0.0641 0.605 CD4_Naive L2
ENSG00000059758 CDK17 358447 sc-eQTL 3.73e-01 -0.0352 0.0395 0.605 CD4_TCM L2
ENSG00000111144 LTA4H 715407 sc-eQTL 4.28e-01 -0.0532 0.067 0.605 CD4_TCM L2
ENSG00000111145 ELK3 564552 sc-eQTL 4.40e-01 -0.051 0.0659 0.605 CD4_TCM L2
ENSG00000139343 SNRPF 899999 sc-eQTL 2.27e-01 -0.0653 0.054 0.605 CD4_TCM L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 7.65e-01 -0.0221 0.074 0.605 CD4_TCM L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.06e-01 0.0631 0.0498 0.605 CD4_TEM L2
ENSG00000111144 LTA4H 715407 sc-eQTL 1.33e-01 0.116 0.0767 0.605 CD4_TEM L2
ENSG00000111145 ELK3 564552 sc-eQTL 7.49e-01 0.023 0.0717 0.605 CD4_TEM L2
ENSG00000139343 SNRPF 899999 sc-eQTL 8.14e-02 -0.13 0.0745 0.605 CD4_TEM L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 6.74e-02 -0.162 0.0883 0.605 CD4_TEM L2
ENSG00000059758 CDK17 358447 sc-eQTL 5.68e-01 0.0274 0.048 0.605 CD8_CTL L2
ENSG00000111144 LTA4H 715407 sc-eQTL 6.33e-01 -0.0414 0.0867 0.605 CD8_CTL L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.47e-01 0.00529 0.079 0.605 CD8_CTL L2
ENSG00000139343 SNRPF 899999 sc-eQTL 8.49e-01 -0.0138 0.0726 0.605 CD8_CTL L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 3.58e-01 -0.0748 0.0813 0.605 CD8_CTL L2
ENSG00000059758 CDK17 358447 sc-eQTL 3.53e-01 -0.0533 0.0573 0.605 CD8_Naive L2
ENSG00000111144 LTA4H 715407 sc-eQTL 6.72e-01 0.0292 0.0688 0.605 CD8_Naive L2
ENSG00000111145 ELK3 564552 sc-eQTL 3.30e-02 -0.155 0.072 0.605 CD8_Naive L2
ENSG00000139343 SNRPF 899999 sc-eQTL 1.23e-01 0.101 0.0651 0.605 CD8_Naive L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.30e-01 -0.0616 0.0778 0.605 CD8_Naive L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.35e-01 0.0755 0.0634 0.6 CD8_TCM L2
ENSG00000111144 LTA4H 715407 sc-eQTL 8.17e-01 0.0217 0.0935 0.6 CD8_TCM L2
ENSG00000111145 ELK3 564552 sc-eQTL 5.18e-01 -0.0512 0.0791 0.6 CD8_TCM L2
ENSG00000139343 SNRPF 899999 sc-eQTL 7.29e-01 -0.0316 0.0912 0.6 CD8_TCM L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.35e-01 -0.0698 0.0891 0.6 CD8_TCM L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.07e-01 -0.0977 0.0771 0.605 CD8_TEM L2
ENSG00000111144 LTA4H 715407 sc-eQTL 8.74e-01 -0.015 0.0948 0.605 CD8_TEM L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.76e-01 0.00285 0.0932 0.605 CD8_TEM L2
ENSG00000139343 SNRPF 899999 sc-eQTL 8.10e-01 0.0208 0.0866 0.605 CD8_TEM L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 8.62e-01 -0.0164 0.094 0.605 CD8_TEM L2
ENSG00000059758 CDK17 358447 sc-eQTL 8.11e-01 -0.0125 0.0522 0.604 MAIT L2
ENSG00000074527 NTN4 967775 sc-eQTL 6.93e-01 -0.0278 0.0704 0.604 MAIT L2
ENSG00000111144 LTA4H 715407 sc-eQTL 1.25e-01 -0.124 0.0802 0.604 MAIT L2
ENSG00000111145 ELK3 564552 sc-eQTL 5.05e-01 -0.0452 0.0676 0.604 MAIT L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.99e-01 -0.0531 0.0784 0.604 MAIT L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.96e-01 -0.0601 0.088 0.604 MAIT L2
ENSG00000188596 CFAP54 269356 sc-eQTL 3.43e-01 -0.0828 0.0871 0.604 MAIT L2
ENSG00000059758 CDK17 358447 sc-eQTL 1.11e-02 0.139 0.0544 0.607 NK_CD56bright L2
ENSG00000111144 LTA4H 715407 sc-eQTL 9.06e-01 0.00964 0.0818 0.607 NK_CD56bright L2
ENSG00000111145 ELK3 564552 sc-eQTL 8.31e-01 0.0185 0.0868 0.607 NK_CD56bright L2
ENSG00000139343 SNRPF 899999 sc-eQTL 1.71e-02 0.215 0.0895 0.607 NK_CD56bright L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 6.92e-01 0.0363 0.0916 0.607 NK_CD56bright L2
ENSG00000059758 CDK17 358447 sc-eQTL 6.77e-02 0.0846 0.0461 0.608 NK_CD56dim L2
ENSG00000111144 LTA4H 715407 sc-eQTL 2.26e-01 -0.102 0.0836 0.608 NK_CD56dim L2
ENSG00000111145 ELK3 564552 sc-eQTL 7.46e-01 0.0241 0.0743 0.608 NK_CD56dim L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.46e-01 -0.0539 0.0706 0.608 NK_CD56dim L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 6.49e-01 -0.0371 0.0814 0.608 NK_CD56dim L2
ENSG00000059758 CDK17 358447 sc-eQTL 9.80e-01 -0.0018 0.072 0.61 NK_HLA L2
ENSG00000111144 LTA4H 715407 sc-eQTL 3.65e-02 -0.196 0.0933 0.61 NK_HLA L2
ENSG00000111145 ELK3 564552 sc-eQTL 1.39e-01 0.129 0.0871 0.61 NK_HLA L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.41e-02 0.183 0.0903 0.61 NK_HLA L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 2.91e-01 -0.0912 0.0861 0.61 NK_HLA L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.95e-01 0.0529 0.0504 0.608 NK_cytokine L2
ENSG00000111144 LTA4H 715407 sc-eQTL 5.17e-01 -0.0554 0.0854 0.608 NK_cytokine L2
ENSG00000111145 ELK3 564552 sc-eQTL 5.33e-01 -0.051 0.0818 0.608 NK_cytokine L2
ENSG00000139343 SNRPF 899999 sc-eQTL 3.41e-01 0.066 0.0692 0.608 NK_cytokine L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.88e-01 0.113 0.0853 0.608 NK_cytokine L2
ENSG00000059758 CDK17 358447 sc-eQTL 1.69e-01 -0.141 0.102 0.604 PB L2
ENSG00000111144 LTA4H 715407 sc-eQTL 4.40e-01 -0.0702 0.0905 0.604 PB L2
ENSG00000111145 ELK3 564552 sc-eQTL 6.29e-01 0.0563 0.116 0.604 PB L2
ENSG00000139343 SNRPF 899999 sc-eQTL 9.75e-01 0.00351 0.113 0.604 PB L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 7.88e-01 0.0362 0.135 0.604 PB L2
ENSG00000059758 CDK17 358447 sc-eQTL 9.23e-01 -0.00545 0.0566 0.6 Pro_T L2
ENSG00000074527 NTN4 967775 sc-eQTL 2.38e-01 -0.0749 0.0634 0.6 Pro_T L2
ENSG00000111144 LTA4H 715407 sc-eQTL 3.32e-01 -0.0725 0.0746 0.6 Pro_T L2
ENSG00000111145 ELK3 564552 sc-eQTL 3.43e-01 -0.0858 0.0902 0.6 Pro_T L2
ENSG00000139343 SNRPF 899999 sc-eQTL 5.96e-01 0.0303 0.057 0.6 Pro_T L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 2.54e-01 0.0944 0.0826 0.6 Pro_T L2
ENSG00000188596 CFAP54 269356 sc-eQTL 8.67e-01 0.0112 0.067 0.6 Pro_T L2
ENSG00000059758 CDK17 358447 sc-eQTL 5.52e-01 -0.0368 0.0618 0.605 Treg L2
ENSG00000111144 LTA4H 715407 sc-eQTL 4.23e-01 -0.0628 0.0782 0.605 Treg L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.73e-01 0.00237 0.0709 0.605 Treg L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.96e-01 0.056 0.082 0.605 Treg L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.70e-01 0.125 0.0912 0.605 Treg L2
ENSG00000059758 CDK17 358447 sc-eQTL 8.83e-01 0.0115 0.0782 0.598 cDC L2
ENSG00000084110 HAL 762562 sc-eQTL 3.34e-01 -0.0786 0.0811 0.598 cDC L2
ENSG00000111144 LTA4H 715407 sc-eQTL 3.37e-03 0.202 0.0681 0.598 cDC L2
ENSG00000111145 ELK3 564552 sc-eQTL 4.70e-01 -0.0666 0.0919 0.598 cDC L2
ENSG00000139343 SNRPF 899999 sc-eQTL 5.43e-01 0.0469 0.0769 0.598 cDC L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.75e-01 -0.127 0.0933 0.598 cDC L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 8.28e-01 0.0172 0.0791 0.598 cDC L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.51e-01 -0.0763 0.0663 0.605 cMono_IL1B L2
ENSG00000084110 HAL 762562 sc-eQTL 3.76e-01 0.0643 0.0724 0.605 cMono_IL1B L2
ENSG00000111144 LTA4H 715407 sc-eQTL 8.89e-02 0.133 0.0779 0.605 cMono_IL1B L2
ENSG00000111145 ELK3 564552 sc-eQTL 1.83e-01 -0.0804 0.0601 0.605 cMono_IL1B L2
ENSG00000139343 SNRPF 899999 sc-eQTL 4.72e-01 -0.0448 0.0622 0.605 cMono_IL1B L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 8.87e-03 -0.223 0.0844 0.605 cMono_IL1B L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 1.89e-02 0.187 0.079 0.605 cMono_IL1B L2
ENSG00000059758 CDK17 358447 sc-eQTL 6.93e-01 -0.0298 0.0754 0.605 cMono_S100A L2
ENSG00000084110 HAL 762562 sc-eQTL 8.72e-01 -0.0136 0.0846 0.605 cMono_S100A L2
ENSG00000111144 LTA4H 715407 sc-eQTL 1.53e-01 0.121 0.0841 0.605 cMono_S100A L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.31e-01 -0.00597 0.0689 0.605 cMono_S100A L2
ENSG00000139343 SNRPF 899999 sc-eQTL 6.36e-01 0.0322 0.068 0.605 cMono_S100A L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 7.21e-01 -0.0329 0.0918 0.605 cMono_S100A L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 7.72e-03 0.229 0.085 0.605 cMono_S100A L2
ENSG00000059758 CDK17 358447 sc-eQTL 7.18e-01 0.027 0.0749 0.603 gdT L2
ENSG00000074527 NTN4 967775 sc-eQTL 7.35e-01 0.0292 0.0859 0.603 gdT L2
ENSG00000111144 LTA4H 715407 sc-eQTL 1.25e-01 -0.172 0.111 0.603 gdT L2
ENSG00000111145 ELK3 564552 sc-eQTL 6.07e-01 0.0534 0.104 0.603 gdT L2
ENSG00000139343 SNRPF 899999 sc-eQTL 2.61e-01 0.112 0.0996 0.603 gdT L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 5.59e-01 0.0646 0.11 0.603 gdT L2
ENSG00000188596 CFAP54 269356 sc-eQTL 5.08e-01 0.0642 0.0967 0.603 gdT L2
ENSG00000059758 CDK17 358447 sc-eQTL 1.25e-01 -0.13 0.0843 0.602 intMono L2
ENSG00000084110 HAL 762562 sc-eQTL 4.93e-01 0.0588 0.0856 0.602 intMono L2
ENSG00000111144 LTA4H 715407 sc-eQTL 2.65e-01 0.0981 0.0877 0.602 intMono L2
ENSG00000111145 ELK3 564552 sc-eQTL 5.38e-01 0.0482 0.0783 0.602 intMono L2
ENSG00000139343 SNRPF 899999 sc-eQTL 1.17e-01 -0.131 0.0832 0.602 intMono L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 1.13e-01 -0.138 0.0865 0.602 intMono L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 1.75e-01 0.119 0.0871 0.602 intMono L2
ENSG00000059758 CDK17 358447 sc-eQTL 2.69e-01 0.0742 0.067 0.593 ncMono L2
ENSG00000084110 HAL 762562 sc-eQTL 5.57e-01 -0.0441 0.0749 0.593 ncMono L2
ENSG00000111144 LTA4H 715407 sc-eQTL 9.61e-01 -0.00407 0.0836 0.593 ncMono L2
ENSG00000111145 ELK3 564552 sc-eQTL 8.17e-01 -0.0166 0.0718 0.593 ncMono L2
ENSG00000139343 SNRPF 899999 sc-eQTL 1.56e-01 -0.104 0.073 0.593 ncMono L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 9.45e-01 -0.00541 0.0779 0.593 ncMono L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 7.98e-01 0.0228 0.0889 0.593 ncMono L2
ENSG00000059758 CDK17 358447 sc-eQTL 4.32e-01 -0.0686 0.0871 0.588 pDC L2
ENSG00000084110 HAL 762562 sc-eQTL 8.29e-01 -0.016 0.0737 0.588 pDC L2
ENSG00000111144 LTA4H 715407 sc-eQTL 3.13e-02 0.177 0.0813 0.588 pDC L2
ENSG00000111145 ELK3 564552 sc-eQTL 9.95e-01 0.000684 0.101 0.588 pDC L2
ENSG00000139343 SNRPF 899999 sc-eQTL 9.19e-01 0.00892 0.0881 0.588 pDC L2
ENSG00000139350 NEDD1 -148296 sc-eQTL 5.65e-01 -0.056 0.0971 0.588 pDC L2
ENSG00000257715 AC007298.1 733604 sc-eQTL 7.52e-01 0.0264 0.0833 0.588 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 358447 sc-eQTL 7.82e-01 0.0166 0.0598 0.605 B_Memory LOneK1K
ENSG00000111144 LTA4H 715407 sc-eQTL 7.89e-01 0.0166 0.0621 0.605 B_Memory LOneK1K
ENSG00000111145 ELK3 564552 sc-eQTL 7.20e-01 -0.0255 0.0709 0.605 B_Memory LOneK1K
ENSG00000139343 SNRPF 899999 sc-eQTL 9.04e-01 -0.00833 0.0688 0.605 B_Memory LOneK1K
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.56e-01 0.0673 0.0901 0.605 B_Memory LOneK1K
ENSG00000059758 CDK17 358447 sc-eQTL 1.23e-01 0.0782 0.0505 0.605 B_Naive LOneK1K
ENSG00000111144 LTA4H 715407 sc-eQTL 1.83e-01 0.0759 0.0568 0.605 B_Naive LOneK1K
ENSG00000111145 ELK3 564552 sc-eQTL 8.89e-01 -0.00905 0.0649 0.605 B_Naive LOneK1K
ENSG00000139343 SNRPF 899999 sc-eQTL 5.74e-01 0.0368 0.0653 0.605 B_Naive LOneK1K
ENSG00000139350 NEDD1 -148296 sc-eQTL 2.73e-01 -0.0949 0.0863 0.605 B_Naive LOneK1K
ENSG00000059758 CDK17 358447 sc-eQTL 2.90e-01 -0.0635 0.0598 0.605 CD14_Mono LOneK1K
ENSG00000084110 HAL 762562 sc-eQTL 9.06e-01 0.00855 0.0726 0.605 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 715407 sc-eQTL 7.36e-02 0.142 0.0791 0.605 CD14_Mono LOneK1K
ENSG00000111145 ELK3 564552 sc-eQTL 4.59e-01 -0.0427 0.0575 0.605 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 899999 sc-eQTL 6.25e-01 -0.0272 0.0556 0.605 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -148296 sc-eQTL 7.49e-02 -0.155 0.0865 0.605 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 733604 sc-eQTL 3.85e-03 0.231 0.0792 0.605 CD14_Mono LOneK1K
ENSG00000059758 CDK17 358447 sc-eQTL 7.27e-01 -0.0216 0.0618 0.606 CD16_Mono LOneK1K
ENSG00000084110 HAL 762562 sc-eQTL 9.52e-01 0.00442 0.0731 0.606 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 715407 sc-eQTL 3.67e-01 0.0731 0.0809 0.606 CD16_Mono LOneK1K
ENSG00000111145 ELK3 564552 sc-eQTL 7.35e-01 -0.0203 0.0599 0.606 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 899999 sc-eQTL 3.41e-02 -0.13 0.0612 0.606 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -148296 sc-eQTL 4.15e-01 -0.0647 0.0792 0.606 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 733604 sc-eQTL 8.20e-01 0.0191 0.0839 0.606 CD16_Mono LOneK1K
ENSG00000059758 CDK17 358447 sc-eQTL 1.17e-01 0.0682 0.0434 0.608 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 715407 sc-eQTL 3.78e-02 -0.157 0.0751 0.608 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 564552 sc-eQTL 8.53e-01 0.0129 0.0694 0.608 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 899999 sc-eQTL 8.93e-01 0.00798 0.0594 0.608 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -148296 sc-eQTL 9.41e-01 0.00549 0.0741 0.608 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -148296 eQTL 1.03e-07 -0.125 0.0234 0.0 0.0 0.388
ENSG00000188596 CFAP54 269352 eQTL 0.000647 -0.0674 0.0197 0.0 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -148296 4e-06 3.66e-06 8.24e-07 2.02e-06 1.32e-06 8.5e-07 2.52e-06 9.78e-07 3.47e-06 1.73e-06 3.71e-06 2.61e-06 6.16e-06 1.25e-06 1.22e-06 2.63e-06 1.82e-06 2.87e-06 1.33e-06 1.02e-06 2.41e-06 3.89e-06 3.51e-06 1.36e-06 4.69e-06 1.62e-06 2.21e-06 1.38e-06 4.13e-06 3.41e-06 1.94e-06 5.58e-07 6.52e-07 1.52e-06 1.88e-06 9.53e-07 9.63e-07 4.76e-07 9.12e-07 3.71e-07 7.59e-07 4.15e-06 4.63e-07 1.65e-07 5.92e-07 4.13e-07 8.4e-07 4.26e-07 4.54e-07
ENSG00000188596 CFAP54 269352 1.27e-06 1.08e-06 2.4e-07 1.2e-06 4.25e-07 6.05e-07 1.49e-06 3.78e-07 1.72e-06 6.61e-07 2.06e-06 9.11e-07 2.52e-06 2.59e-07 4.81e-07 9.9e-07 9.36e-07 1.12e-06 5.84e-07 4.68e-07 7.69e-07 1.92e-06 1.12e-06 6.61e-07 2.28e-06 8.72e-07 1.06e-06 8.87e-07 1.63e-06 1.16e-06 8.51e-07 2.78e-07 2.82e-07 6.23e-07 5.31e-07 6.07e-07 7.05e-07 3.25e-07 4.85e-07 2.04e-07 2.88e-07 1.58e-06 1.28e-07 1.14e-07 3.81e-07 2.31e-07 2.79e-07 1.05e-07 2.8e-07