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Genes within 1Mb (chr12:96754991:G:C):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354511 sc-eQTL 3.68e-01 0.0402 0.0446 0.603 B L1
ENSG00000111144 LTA4H 711471 sc-eQTL 2.03e-01 0.0706 0.0553 0.603 B L1
ENSG00000111145 ELK3 560616 sc-eQTL 7.88e-01 0.0159 0.0591 0.603 B L1
ENSG00000139343 SNRPF 896063 sc-eQTL 6.85e-01 0.0218 0.0536 0.603 B L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.93e-01 -0.102 0.078 0.603 B L1
ENSG00000059758 CDK17 354511 sc-eQTL 9.08e-01 0.00426 0.0369 0.603 CD4T L1
ENSG00000111144 LTA4H 711471 sc-eQTL 5.04e-01 -0.0339 0.0507 0.603 CD4T L1
ENSG00000111145 ELK3 560616 sc-eQTL 4.88e-01 -0.0381 0.0549 0.603 CD4T L1
ENSG00000139343 SNRPF 896063 sc-eQTL 3.63e-01 -0.0437 0.0479 0.603 CD4T L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.32e-01 -0.089 0.0588 0.603 CD4T L1
ENSG00000059758 CDK17 354511 sc-eQTL 2.07e-01 -0.0479 0.0378 0.603 CD8T L1
ENSG00000111144 LTA4H 711471 sc-eQTL 9.61e-01 0.00199 0.0408 0.603 CD8T L1
ENSG00000111145 ELK3 560616 sc-eQTL 2.02e-01 -0.0783 0.0611 0.603 CD8T L1
ENSG00000139343 SNRPF 896063 sc-eQTL 7.29e-01 0.0174 0.0503 0.603 CD8T L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.05e-01 -0.0685 0.0667 0.603 CD8T L1
ENSG00000059758 CDK17 354511 sc-eQTL 7.76e-01 -0.0203 0.0712 0.599 DC L1
ENSG00000084110 HAL 758626 sc-eQTL 4.03e-01 -0.0678 0.0809 0.599 DC L1
ENSG00000111144 LTA4H 711471 sc-eQTL 3.17e-02 0.142 0.0655 0.599 DC L1
ENSG00000111145 ELK3 560616 sc-eQTL 6.10e-01 -0.0414 0.0811 0.599 DC L1
ENSG00000139343 SNRPF 896063 sc-eQTL 5.16e-01 0.0438 0.0674 0.599 DC L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.04e-01 -0.141 0.0861 0.599 DC L1
ENSG00000257715 AC007298.1 729668 sc-eQTL 1.95e-01 -0.101 0.0779 0.599 DC L1
ENSG00000059758 CDK17 354511 sc-eQTL 8.89e-01 -0.00803 0.0572 0.603 Mono L1
ENSG00000084110 HAL 758626 sc-eQTL 9.91e-01 0.000818 0.0721 0.603 Mono L1
ENSG00000111144 LTA4H 711471 sc-eQTL 9.84e-02 0.134 0.0809 0.603 Mono L1
ENSG00000111145 ELK3 560616 sc-eQTL 5.75e-01 -0.0307 0.0547 0.603 Mono L1
ENSG00000139343 SNRPF 896063 sc-eQTL 3.03e-01 -0.0531 0.0514 0.603 Mono L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.72e-02 -0.144 0.0785 0.603 Mono L1
ENSG00000257715 AC007298.1 729668 sc-eQTL 1.53e-02 0.185 0.0757 0.603 Mono L1
ENSG00000059758 CDK17 354511 sc-eQTL 1.01e-01 0.0705 0.0427 0.603 NK L1
ENSG00000111144 LTA4H 711471 sc-eQTL 1.22e-01 -0.113 0.0726 0.603 NK L1
ENSG00000111145 ELK3 560616 sc-eQTL 8.79e-01 0.0106 0.0693 0.603 NK L1
ENSG00000139343 SNRPF 896063 sc-eQTL 5.69e-01 0.0327 0.0574 0.603 NK L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 8.96e-01 -0.00949 0.0727 0.603 NK L1
ENSG00000059758 CDK17 354511 sc-eQTL 2.41e-01 0.0421 0.0358 0.603 Other_T L1
ENSG00000074527 NTN4 963839 sc-eQTL 5.69e-01 -0.0379 0.0664 0.603 Other_T L1
ENSG00000111144 LTA4H 711471 sc-eQTL 1.34e-02 -0.185 0.074 0.603 Other_T L1
ENSG00000111145 ELK3 560616 sc-eQTL 3.80e-01 -0.0515 0.0585 0.603 Other_T L1
ENSG00000139343 SNRPF 896063 sc-eQTL 4.85e-01 0.0381 0.0544 0.603 Other_T L1
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.26e-01 -0.0404 0.0829 0.603 Other_T L1
ENSG00000188596 CFAP54 265420 sc-eQTL 7.22e-01 -0.0306 0.0859 0.603 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354511 sc-eQTL 9.03e-01 -0.0103 0.0839 0.589 B_Activated L2
ENSG00000111144 LTA4H 711471 sc-eQTL 8.26e-01 0.0208 0.095 0.589 B_Activated L2
ENSG00000111145 ELK3 560616 sc-eQTL 9.90e-01 0.00123 0.101 0.589 B_Activated L2
ENSG00000139343 SNRPF 896063 sc-eQTL 8.51e-01 0.0178 0.0948 0.589 B_Activated L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.30e-01 -0.0479 0.0991 0.589 B_Activated L2
ENSG00000059758 CDK17 354511 sc-eQTL 6.19e-01 0.0356 0.0714 0.601 B_Intermediate L2
ENSG00000111144 LTA4H 711471 sc-eQTL 5.58e-01 0.0405 0.0691 0.601 B_Intermediate L2
ENSG00000111145 ELK3 560616 sc-eQTL 3.80e-01 -0.0685 0.0779 0.601 B_Intermediate L2
ENSG00000139343 SNRPF 896063 sc-eQTL 7.30e-01 0.0268 0.0777 0.601 B_Intermediate L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 8.58e-01 0.0163 0.091 0.601 B_Intermediate L2
ENSG00000059758 CDK17 354511 sc-eQTL 6.28e-01 -0.0335 0.069 0.606 B_Memory L2
ENSG00000111144 LTA4H 711471 sc-eQTL 5.12e-01 -0.0523 0.0796 0.606 B_Memory L2
ENSG00000111145 ELK3 560616 sc-eQTL 3.99e-01 0.0661 0.0782 0.606 B_Memory L2
ENSG00000139343 SNRPF 896063 sc-eQTL 4.46e-01 -0.0633 0.0829 0.606 B_Memory L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.45e-01 0.134 0.0914 0.606 B_Memory L2
ENSG00000059758 CDK17 354511 sc-eQTL 4.31e-01 0.0444 0.0562 0.603 B_Naive1 L2
ENSG00000111144 LTA4H 711471 sc-eQTL 4.34e-01 0.0462 0.0589 0.603 B_Naive1 L2
ENSG00000111145 ELK3 560616 sc-eQTL 3.89e-01 0.0601 0.0696 0.603 B_Naive1 L2
ENSG00000139343 SNRPF 896063 sc-eQTL 2.74e-01 0.0741 0.0676 0.603 B_Naive1 L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.85e-01 -0.0755 0.0868 0.603 B_Naive1 L2
ENSG00000059758 CDK17 354511 sc-eQTL 7.73e-02 0.127 0.0718 0.603 B_Naive2 L2
ENSG00000111144 LTA4H 711471 sc-eQTL 3.49e-01 0.0642 0.0684 0.603 B_Naive2 L2
ENSG00000111145 ELK3 560616 sc-eQTL 7.06e-01 -0.0306 0.0808 0.603 B_Naive2 L2
ENSG00000139343 SNRPF 896063 sc-eQTL 4.28e-01 0.0636 0.0801 0.603 B_Naive2 L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 4.06e-01 -0.0793 0.0952 0.603 B_Naive2 L2
ENSG00000059758 CDK17 354511 sc-eQTL 9.37e-01 -0.00523 0.0666 0.607 CD4_CTL L2
ENSG00000111144 LTA4H 711471 sc-eQTL 5.57e-02 -0.179 0.0931 0.607 CD4_CTL L2
ENSG00000111145 ELK3 560616 sc-eQTL 7.84e-01 0.0261 0.0951 0.607 CD4_CTL L2
ENSG00000139343 SNRPF 896063 sc-eQTL 5.28e-01 0.0522 0.0826 0.607 CD4_CTL L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 5.00e-01 -0.0645 0.0955 0.607 CD4_CTL L2
ENSG00000059758 CDK17 354511 sc-eQTL 5.95e-01 0.0216 0.0405 0.603 CD4_Naive L2
ENSG00000111144 LTA4H 711471 sc-eQTL 2.73e-01 -0.0643 0.0585 0.603 CD4_Naive L2
ENSG00000111145 ELK3 560616 sc-eQTL 4.68e-01 -0.0426 0.0586 0.603 CD4_Naive L2
ENSG00000139343 SNRPF 896063 sc-eQTL 4.07e-01 -0.0432 0.052 0.603 CD4_Naive L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.21e-02 -0.119 0.0636 0.603 CD4_Naive L2
ENSG00000059758 CDK17 354511 sc-eQTL 3.96e-01 -0.0334 0.0392 0.603 CD4_TCM L2
ENSG00000111144 LTA4H 711471 sc-eQTL 4.38e-01 -0.0517 0.0666 0.603 CD4_TCM L2
ENSG00000111145 ELK3 560616 sc-eQTL 5.51e-01 -0.0391 0.0656 0.603 CD4_TCM L2
ENSG00000139343 SNRPF 896063 sc-eQTL 2.62e-01 -0.0603 0.0537 0.603 CD4_TCM L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 7.83e-01 -0.0203 0.0735 0.603 CD4_TCM L2
ENSG00000059758 CDK17 354511 sc-eQTL 2.17e-01 0.0612 0.0494 0.603 CD4_TEM L2
ENSG00000111144 LTA4H 711471 sc-eQTL 1.19e-01 0.119 0.0762 0.603 CD4_TEM L2
ENSG00000111145 ELK3 560616 sc-eQTL 7.41e-01 0.0236 0.0712 0.603 CD4_TEM L2
ENSG00000139343 SNRPF 896063 sc-eQTL 9.70e-02 -0.123 0.0741 0.603 CD4_TEM L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 5.97e-02 -0.166 0.0877 0.603 CD4_TEM L2
ENSG00000059758 CDK17 354511 sc-eQTL 5.94e-01 0.0255 0.0477 0.603 CD8_CTL L2
ENSG00000111144 LTA4H 711471 sc-eQTL 5.82e-01 -0.0474 0.0861 0.603 CD8_CTL L2
ENSG00000111145 ELK3 560616 sc-eQTL 9.08e-01 0.00904 0.0785 0.603 CD8_CTL L2
ENSG00000139343 SNRPF 896063 sc-eQTL 9.62e-01 -0.00344 0.0721 0.603 CD8_CTL L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.78e-01 -0.0713 0.0807 0.603 CD8_CTL L2
ENSG00000059758 CDK17 354511 sc-eQTL 3.34e-01 -0.0552 0.057 0.603 CD8_Naive L2
ENSG00000111144 LTA4H 711471 sc-eQTL 7.36e-01 0.0231 0.0684 0.603 CD8_Naive L2
ENSG00000111145 ELK3 560616 sc-eQTL 4.95e-02 -0.142 0.0717 0.603 CD8_Naive L2
ENSG00000139343 SNRPF 896063 sc-eQTL 8.75e-02 0.111 0.0646 0.603 CD8_Naive L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 4.36e-01 -0.0604 0.0773 0.603 CD8_Naive L2
ENSG00000059758 CDK17 354511 sc-eQTL 2.65e-01 0.0702 0.0628 0.597 CD8_TCM L2
ENSG00000111144 LTA4H 711471 sc-eQTL 7.32e-01 0.0318 0.0926 0.597 CD8_TCM L2
ENSG00000111145 ELK3 560616 sc-eQTL 5.66e-01 -0.0451 0.0784 0.597 CD8_TCM L2
ENSG00000139343 SNRPF 896063 sc-eQTL 7.43e-01 -0.0296 0.0903 0.597 CD8_TCM L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 4.22e-01 -0.071 0.0883 0.597 CD8_TCM L2
ENSG00000059758 CDK17 354511 sc-eQTL 1.97e-01 -0.1 0.0773 0.603 CD8_TEM L2
ENSG00000111144 LTA4H 711471 sc-eQTL 8.90e-01 -0.0132 0.0951 0.603 CD8_TEM L2
ENSG00000111145 ELK3 560616 sc-eQTL 9.90e-01 0.00114 0.0935 0.603 CD8_TEM L2
ENSG00000139343 SNRPF 896063 sc-eQTL 8.42e-01 0.0173 0.0869 0.603 CD8_TEM L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 8.57e-01 -0.017 0.0943 0.603 CD8_TEM L2
ENSG00000059758 CDK17 354511 sc-eQTL 7.82e-01 -0.0144 0.0518 0.602 MAIT L2
ENSG00000074527 NTN4 963839 sc-eQTL 7.03e-01 -0.0266 0.0698 0.602 MAIT L2
ENSG00000111144 LTA4H 711471 sc-eQTL 1.17e-01 -0.125 0.0795 0.602 MAIT L2
ENSG00000111145 ELK3 560616 sc-eQTL 5.22e-01 -0.0431 0.0671 0.602 MAIT L2
ENSG00000139343 SNRPF 896063 sc-eQTL 4.88e-01 -0.054 0.0777 0.602 MAIT L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 4.18e-01 -0.0708 0.0872 0.602 MAIT L2
ENSG00000188596 CFAP54 265420 sc-eQTL 3.98e-01 -0.0732 0.0864 0.602 MAIT L2
ENSG00000059758 CDK17 354511 sc-eQTL 1.39e-02 0.134 0.0541 0.604 NK_CD56bright L2
ENSG00000111144 LTA4H 711471 sc-eQTL 8.64e-01 0.0139 0.0812 0.604 NK_CD56bright L2
ENSG00000111145 ELK3 560616 sc-eQTL 7.98e-01 0.0221 0.0862 0.604 NK_CD56bright L2
ENSG00000139343 SNRPF 896063 sc-eQTL 1.28e-02 0.223 0.0888 0.604 NK_CD56bright L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 5.97e-01 0.0482 0.0909 0.604 NK_CD56bright L2
ENSG00000059758 CDK17 354511 sc-eQTL 7.07e-02 0.0833 0.0458 0.606 NK_CD56dim L2
ENSG00000111144 LTA4H 711471 sc-eQTL 2.06e-01 -0.106 0.0832 0.606 NK_CD56dim L2
ENSG00000111145 ELK3 560616 sc-eQTL 7.03e-01 0.0282 0.0739 0.606 NK_CD56dim L2
ENSG00000139343 SNRPF 896063 sc-eQTL 5.08e-01 -0.0466 0.0702 0.606 NK_CD56dim L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 5.23e-01 -0.0517 0.0809 0.606 NK_CD56dim L2
ENSG00000059758 CDK17 354511 sc-eQTL 9.87e-01 0.00121 0.0716 0.607 NK_HLA L2
ENSG00000111144 LTA4H 711471 sc-eQTL 4.82e-02 -0.185 0.0929 0.607 NK_HLA L2
ENSG00000111145 ELK3 560616 sc-eQTL 1.30e-01 0.132 0.0865 0.607 NK_HLA L2
ENSG00000139343 SNRPF 896063 sc-eQTL 3.55e-02 0.19 0.0897 0.607 NK_HLA L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.32e-01 -0.0833 0.0856 0.607 NK_HLA L2
ENSG00000059758 CDK17 354511 sc-eQTL 2.68e-01 0.0557 0.0502 0.606 NK_cytokine L2
ENSG00000111144 LTA4H 711471 sc-eQTL 5.16e-01 -0.0553 0.085 0.606 NK_cytokine L2
ENSG00000111145 ELK3 560616 sc-eQTL 4.68e-01 -0.0592 0.0813 0.606 NK_cytokine L2
ENSG00000139343 SNRPF 896063 sc-eQTL 2.92e-01 0.0726 0.0688 0.606 NK_cytokine L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 2.38e-01 0.101 0.085 0.606 NK_cytokine L2
ENSG00000059758 CDK17 354511 sc-eQTL 1.69e-01 -0.141 0.102 0.604 PB L2
ENSG00000111144 LTA4H 711471 sc-eQTL 4.40e-01 -0.0702 0.0905 0.604 PB L2
ENSG00000111145 ELK3 560616 sc-eQTL 6.29e-01 0.0563 0.116 0.604 PB L2
ENSG00000139343 SNRPF 896063 sc-eQTL 9.75e-01 0.00351 0.113 0.604 PB L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 7.88e-01 0.0362 0.135 0.604 PB L2
ENSG00000059758 CDK17 354511 sc-eQTL 9.58e-01 -0.00294 0.0562 0.598 Pro_T L2
ENSG00000074527 NTN4 963839 sc-eQTL 2.47e-01 -0.073 0.0629 0.598 Pro_T L2
ENSG00000111144 LTA4H 711471 sc-eQTL 3.36e-01 -0.0715 0.0741 0.598 Pro_T L2
ENSG00000111145 ELK3 560616 sc-eQTL 2.99e-01 -0.0934 0.0896 0.598 Pro_T L2
ENSG00000139343 SNRPF 896063 sc-eQTL 6.64e-01 0.0246 0.0566 0.598 Pro_T L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 2.73e-01 0.0902 0.082 0.598 Pro_T L2
ENSG00000188596 CFAP54 265420 sc-eQTL 9.72e-01 -0.00234 0.0665 0.598 Pro_T L2
ENSG00000059758 CDK17 354511 sc-eQTL 6.02e-01 -0.032 0.0614 0.603 Treg L2
ENSG00000111144 LTA4H 711471 sc-eQTL 4.01e-01 -0.0653 0.0777 0.603 Treg L2
ENSG00000111145 ELK3 560616 sc-eQTL 9.21e-01 0.00697 0.0705 0.603 Treg L2
ENSG00000139343 SNRPF 896063 sc-eQTL 3.73e-01 0.0727 0.0815 0.603 Treg L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.48e-01 0.132 0.0907 0.603 Treg L2
ENSG00000059758 CDK17 354511 sc-eQTL 8.24e-01 0.0173 0.0777 0.595 cDC L2
ENSG00000084110 HAL 758626 sc-eQTL 4.10e-01 -0.0666 0.0806 0.595 cDC L2
ENSG00000111144 LTA4H 711471 sc-eQTL 2.55e-03 0.207 0.0675 0.595 cDC L2
ENSG00000111145 ELK3 560616 sc-eQTL 4.52e-01 -0.0687 0.0912 0.595 cDC L2
ENSG00000139343 SNRPF 896063 sc-eQTL 4.64e-01 0.0561 0.0764 0.595 cDC L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 1.86e-01 -0.123 0.0927 0.595 cDC L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 8.06e-01 0.0194 0.0786 0.595 cDC L2
ENSG00000059758 CDK17 354511 sc-eQTL 2.62e-01 -0.0741 0.0659 0.603 cMono_IL1B L2
ENSG00000084110 HAL 758626 sc-eQTL 3.25e-01 0.071 0.0719 0.603 cMono_IL1B L2
ENSG00000111144 LTA4H 711471 sc-eQTL 7.93e-02 0.136 0.0773 0.603 cMono_IL1B L2
ENSG00000111145 ELK3 560616 sc-eQTL 1.60e-01 -0.0842 0.0597 0.603 cMono_IL1B L2
ENSG00000139343 SNRPF 896063 sc-eQTL 5.36e-01 -0.0383 0.0618 0.603 cMono_IL1B L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.53e-03 -0.23 0.0837 0.603 cMono_IL1B L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 2.23e-02 0.181 0.0785 0.603 cMono_IL1B L2
ENSG00000059758 CDK17 354511 sc-eQTL 7.29e-01 -0.026 0.0749 0.603 cMono_S100A L2
ENSG00000084110 HAL 758626 sc-eQTL 7.80e-01 -0.0235 0.0841 0.603 cMono_S100A L2
ENSG00000111144 LTA4H 711471 sc-eQTL 1.42e-01 0.123 0.0836 0.603 cMono_S100A L2
ENSG00000111145 ELK3 560616 sc-eQTL 9.65e-01 -0.00302 0.0684 0.603 cMono_S100A L2
ENSG00000139343 SNRPF 896063 sc-eQTL 6.00e-01 0.0355 0.0676 0.603 cMono_S100A L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 7.79e-01 -0.0257 0.0912 0.603 cMono_S100A L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 9.19e-03 0.222 0.0845 0.603 cMono_S100A L2
ENSG00000059758 CDK17 354511 sc-eQTL 7.55e-01 0.0231 0.0738 0.6 gdT L2
ENSG00000074527 NTN4 963839 sc-eQTL 6.84e-01 0.0345 0.0847 0.6 gdT L2
ENSG00000111144 LTA4H 711471 sc-eQTL 9.86e-02 -0.182 0.109 0.6 gdT L2
ENSG00000111145 ELK3 560616 sc-eQTL 5.59e-01 0.0598 0.102 0.6 gdT L2
ENSG00000139343 SNRPF 896063 sc-eQTL 2.71e-01 0.108 0.0982 0.6 gdT L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 5.84e-01 0.0598 0.109 0.6 gdT L2
ENSG00000188596 CFAP54 265420 sc-eQTL 5.36e-01 0.0592 0.0953 0.6 gdT L2
ENSG00000059758 CDK17 354511 sc-eQTL 1.30e-01 -0.127 0.0838 0.6 intMono L2
ENSG00000084110 HAL 758626 sc-eQTL 4.89e-01 0.0589 0.0851 0.6 intMono L2
ENSG00000111144 LTA4H 711471 sc-eQTL 2.49e-01 0.101 0.0871 0.6 intMono L2
ENSG00000111145 ELK3 560616 sc-eQTL 5.83e-01 0.0427 0.0778 0.6 intMono L2
ENSG00000139343 SNRPF 896063 sc-eQTL 1.20e-01 -0.129 0.0827 0.6 intMono L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 8.79e-02 -0.147 0.0858 0.6 intMono L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 1.55e-01 0.123 0.0865 0.6 intMono L2
ENSG00000059758 CDK17 354511 sc-eQTL 2.73e-01 0.073 0.0665 0.59 ncMono L2
ENSG00000084110 HAL 758626 sc-eQTL 6.43e-01 -0.0345 0.0744 0.59 ncMono L2
ENSG00000111144 LTA4H 711471 sc-eQTL 9.70e-01 0.00308 0.083 0.59 ncMono L2
ENSG00000111145 ELK3 560616 sc-eQTL 8.71e-01 -0.0116 0.0712 0.59 ncMono L2
ENSG00000139343 SNRPF 896063 sc-eQTL 1.62e-01 -0.102 0.0724 0.59 ncMono L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 9.05e-01 -0.00927 0.0773 0.59 ncMono L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 8.39e-01 0.018 0.0882 0.59 ncMono L2
ENSG00000059758 CDK17 354511 sc-eQTL 4.52e-01 -0.0651 0.0863 0.585 pDC L2
ENSG00000084110 HAL 758626 sc-eQTL 8.37e-01 -0.015 0.073 0.585 pDC L2
ENSG00000111144 LTA4H 711471 sc-eQTL 3.03e-02 0.176 0.0805 0.585 pDC L2
ENSG00000111145 ELK3 560616 sc-eQTL 8.58e-01 -0.0179 0.1 0.585 pDC L2
ENSG00000139343 SNRPF 896063 sc-eQTL 7.39e-01 0.029 0.0872 0.585 pDC L2
ENSG00000139350 NEDD1 -152232 sc-eQTL 4.53e-01 -0.0723 0.0961 0.585 pDC L2
ENSG00000257715 AC007298.1 729668 sc-eQTL 7.59e-01 0.0254 0.0825 0.585 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354511 sc-eQTL 7.92e-01 0.0156 0.0593 0.603 B_Memory LOneK1K
ENSG00000111144 LTA4H 711471 sc-eQTL 7.28e-01 0.0215 0.0616 0.603 B_Memory LOneK1K
ENSG00000111145 ELK3 560616 sc-eQTL 8.11e-01 -0.0169 0.0704 0.603 B_Memory LOneK1K
ENSG00000139343 SNRPF 896063 sc-eQTL 9.73e-01 -0.0023 0.0682 0.603 B_Memory LOneK1K
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.91e-01 0.0767 0.0893 0.603 B_Memory LOneK1K
ENSG00000059758 CDK17 354511 sc-eQTL 1.05e-01 0.0818 0.0502 0.603 B_Naive LOneK1K
ENSG00000111144 LTA4H 711471 sc-eQTL 1.25e-01 0.0869 0.0564 0.603 B_Naive LOneK1K
ENSG00000111145 ELK3 560616 sc-eQTL 9.96e-01 -0.000347 0.0646 0.603 B_Naive LOneK1K
ENSG00000139343 SNRPF 896063 sc-eQTL 5.23e-01 0.0416 0.0649 0.603 B_Naive LOneK1K
ENSG00000139350 NEDD1 -152232 sc-eQTL 2.59e-01 -0.097 0.0858 0.603 B_Naive LOneK1K
ENSG00000059758 CDK17 354511 sc-eQTL 3.15e-01 -0.0599 0.0594 0.603 CD14_Mono LOneK1K
ENSG00000084110 HAL 758626 sc-eQTL 8.98e-01 0.00929 0.0722 0.603 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 711471 sc-eQTL 6.47e-02 0.146 0.0786 0.603 CD14_Mono LOneK1K
ENSG00000111145 ELK3 560616 sc-eQTL 4.72e-01 -0.0412 0.0572 0.603 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 896063 sc-eQTL 6.81e-01 -0.0227 0.0552 0.603 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -152232 sc-eQTL 6.65e-02 -0.159 0.0859 0.603 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 729668 sc-eQTL 4.88e-03 0.224 0.0787 0.603 CD14_Mono LOneK1K
ENSG00000059758 CDK17 354511 sc-eQTL 7.35e-01 -0.0208 0.0614 0.603 CD16_Mono LOneK1K
ENSG00000084110 HAL 758626 sc-eQTL 8.69e-01 0.012 0.0726 0.603 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 711471 sc-eQTL 3.33e-01 0.0779 0.0803 0.603 CD16_Mono LOneK1K
ENSG00000111145 ELK3 560616 sc-eQTL 7.52e-01 -0.0189 0.0595 0.603 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 896063 sc-eQTL 4.11e-02 -0.125 0.0608 0.603 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -152232 sc-eQTL 3.60e-01 -0.0721 0.0786 0.603 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 729668 sc-eQTL 8.40e-01 0.0168 0.0833 0.603 CD16_Mono LOneK1K
ENSG00000059758 CDK17 354511 sc-eQTL 1.05e-01 0.0703 0.0431 0.606 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 711471 sc-eQTL 3.36e-02 -0.16 0.0747 0.606 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 560616 sc-eQTL 8.37e-01 0.0143 0.0691 0.606 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 896063 sc-eQTL 7.95e-01 0.0154 0.0591 0.606 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -152232 sc-eQTL 9.07e-01 -0.0086 0.0737 0.606 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -152232 eQTL 1.32e-07 -0.124 0.0234 0.0 0.0 0.388
ENSG00000188596 CFAP54 265416 eQTL 0.000669 -0.0673 0.0197 0.0 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -152232 6.46e-06 8.81e-06 6.38e-07 3.81e-06 1.57e-06 1.76e-06 7.57e-06 9.99e-07 4.82e-06 2.8e-06 7.56e-06 2.94e-06 9.98e-06 2.24e-06 9.19e-07 4.09e-06 3.02e-06 3.93e-06 1.56e-06 1.51e-06 2.75e-06 5.62e-06 4.66e-06 1.71e-06 8.97e-06 1.99e-06 2.42e-06 1.57e-06 5.08e-06 6.66e-06 2.72e-06 4.02e-07 5.21e-07 1.52e-06 1.97e-06 1.18e-06 1.06e-06 4.57e-07 9.04e-07 6.03e-07 3.05e-07 8.42e-06 6.31e-07 1.59e-07 6.09e-07 1.14e-06 8.4e-07 5.2e-07 3.9e-07
ENSG00000188596 CFAP54 265416 3.63e-06 3.66e-06 4.65e-07 1.95e-06 4.74e-07 7.53e-07 1.88e-06 4.94e-07 1.86e-06 9.51e-07 2.52e-06 1.41e-06 3.68e-06 1.43e-06 9.13e-07 1.54e-06 1.58e-06 2.3e-06 1.38e-06 1.35e-06 9.57e-07 3.05e-06 2.59e-06 1.03e-06 4.02e-06 1.37e-06 1.39e-06 1.44e-06 1.91e-06 2.49e-06 1.83e-06 3.04e-07 4.31e-07 1.02e-06 1.35e-06 8.84e-07 7.88e-07 4.1e-07 1.18e-06 4.35e-07 3.5e-07 3.35e-06 4.86e-07 1.68e-07 3.3e-07 3.21e-07 3.8e-07 2.41e-07 2.47e-07