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Genes within 1Mb (chr12:96754836:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354356 sc-eQTL 2.59e-01 -0.057 0.0504 0.733 B L1
ENSG00000111144 LTA4H 711316 sc-eQTL 3.44e-01 0.0594 0.0627 0.733 B L1
ENSG00000111145 ELK3 560461 sc-eQTL 9.25e-01 -0.00627 0.0668 0.733 B L1
ENSG00000139343 SNRPF 895908 sc-eQTL 7.65e-01 -0.0182 0.0607 0.733 B L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.31e-01 -0.0699 0.0885 0.733 B L1
ENSG00000059758 CDK17 354356 sc-eQTL 4.69e-01 -0.0301 0.0415 0.733 CD4T L1
ENSG00000111144 LTA4H 711316 sc-eQTL 3.74e-01 -0.0507 0.0569 0.733 CD4T L1
ENSG00000111145 ELK3 560461 sc-eQTL 5.42e-01 -0.0377 0.0617 0.733 CD4T L1
ENSG00000139343 SNRPF 895908 sc-eQTL 2.06e-01 -0.0682 0.0538 0.733 CD4T L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.43e-02 0.149 0.0657 0.733 CD4T L1
ENSG00000059758 CDK17 354356 sc-eQTL 2.08e-03 -0.129 0.0413 0.733 CD8T L1
ENSG00000111144 LTA4H 711316 sc-eQTL 2.61e-01 0.0509 0.0452 0.733 CD8T L1
ENSG00000111145 ELK3 560461 sc-eQTL 9.37e-01 -0.00538 0.0683 0.733 CD8T L1
ENSG00000139343 SNRPF 895908 sc-eQTL 9.28e-01 0.00505 0.056 0.733 CD8T L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.56e-01 0.0231 0.0744 0.733 CD8T L1
ENSG00000059758 CDK17 354356 sc-eQTL 3.42e-02 -0.175 0.0823 0.734 DC L1
ENSG00000084110 HAL 758471 sc-eQTL 1.54e-01 -0.135 0.0942 0.734 DC L1
ENSG00000111144 LTA4H 711316 sc-eQTL 8.49e-01 0.0148 0.0774 0.734 DC L1
ENSG00000111145 ELK3 560461 sc-eQTL 5.01e-01 -0.0638 0.0947 0.734 DC L1
ENSG00000139343 SNRPF 895908 sc-eQTL 8.96e-01 -0.0103 0.0789 0.734 DC L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 5.00e-01 -0.0683 0.101 0.734 DC L1
ENSG00000257715 AC007298.1 729513 sc-eQTL 3.28e-02 -0.194 0.0904 0.734 DC L1
ENSG00000059758 CDK17 354356 sc-eQTL 6.85e-01 0.0257 0.0633 0.733 Mono L1
ENSG00000084110 HAL 758471 sc-eQTL 4.04e-01 -0.0667 0.0797 0.733 Mono L1
ENSG00000111144 LTA4H 711316 sc-eQTL 7.68e-01 0.0266 0.0901 0.733 Mono L1
ENSG00000111145 ELK3 560461 sc-eQTL 7.20e-01 0.0217 0.0605 0.733 Mono L1
ENSG00000139343 SNRPF 895908 sc-eQTL 6.15e-01 -0.0287 0.057 0.733 Mono L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.18e-03 -0.249 0.0859 0.733 Mono L1
ENSG00000257715 AC007298.1 729513 sc-eQTL 2.09e-01 0.107 0.0846 0.733 Mono L1
ENSG00000059758 CDK17 354356 sc-eQTL 6.60e-01 0.0212 0.0482 0.732 NK L1
ENSG00000111144 LTA4H 711316 sc-eQTL 7.30e-01 -0.0283 0.0819 0.732 NK L1
ENSG00000111145 ELK3 560461 sc-eQTL 5.12e-01 0.0509 0.0776 0.732 NK L1
ENSG00000139343 SNRPF 895908 sc-eQTL 4.84e-01 -0.0451 0.0644 0.732 NK L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.00e-01 -0.104 0.0813 0.732 NK L1
ENSG00000059758 CDK17 354356 sc-eQTL 2.81e-01 0.0431 0.04 0.733 Other_T L1
ENSG00000074527 NTN4 963684 sc-eQTL 5.47e-02 -0.142 0.0734 0.733 Other_T L1
ENSG00000111144 LTA4H 711316 sc-eQTL 4.52e-02 -0.167 0.0829 0.733 Other_T L1
ENSG00000111145 ELK3 560461 sc-eQTL 8.03e-01 -0.0163 0.0653 0.733 Other_T L1
ENSG00000139343 SNRPF 895908 sc-eQTL 9.43e-01 -0.00434 0.0607 0.733 Other_T L1
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.70e-01 -0.0271 0.0924 0.733 Other_T L1
ENSG00000188596 CFAP54 265265 sc-eQTL 3.41e-01 0.0913 0.0956 0.733 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354356 sc-eQTL 7.89e-01 0.0248 0.0925 0.727 B_Activated L2
ENSG00000111144 LTA4H 711316 sc-eQTL 6.60e-01 -0.0462 0.105 0.727 B_Activated L2
ENSG00000111145 ELK3 560461 sc-eQTL 9.23e-01 -0.0108 0.111 0.727 B_Activated L2
ENSG00000139343 SNRPF 895908 sc-eQTL 8.81e-01 0.0157 0.105 0.727 B_Activated L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.54e-01 -0.082 0.109 0.727 B_Activated L2
ENSG00000059758 CDK17 354356 sc-eQTL 1.74e-01 -0.109 0.0798 0.732 B_Intermediate L2
ENSG00000111144 LTA4H 711316 sc-eQTL 4.66e-01 -0.0567 0.0775 0.732 B_Intermediate L2
ENSG00000111145 ELK3 560461 sc-eQTL 5.15e-01 -0.0571 0.0874 0.732 B_Intermediate L2
ENSG00000139343 SNRPF 895908 sc-eQTL 5.46e-01 -0.0527 0.0871 0.732 B_Intermediate L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.45e-01 -0.078 0.102 0.732 B_Intermediate L2
ENSG00000059758 CDK17 354356 sc-eQTL 1.10e-01 -0.123 0.0768 0.737 B_Memory L2
ENSG00000111144 LTA4H 711316 sc-eQTL 6.18e-02 -0.166 0.0884 0.737 B_Memory L2
ENSG00000111145 ELK3 560461 sc-eQTL 1.77e-01 0.118 0.0873 0.737 B_Memory L2
ENSG00000139343 SNRPF 895908 sc-eQTL 9.04e-02 -0.157 0.0922 0.737 B_Memory L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.08e-01 0.129 0.102 0.737 B_Memory L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.22e-01 -0.0769 0.0629 0.733 B_Naive1 L2
ENSG00000111144 LTA4H 711316 sc-eQTL 9.46e-01 -0.00444 0.0661 0.733 B_Naive1 L2
ENSG00000111145 ELK3 560461 sc-eQTL 4.52e-01 -0.0588 0.078 0.733 B_Naive1 L2
ENSG00000139343 SNRPF 895908 sc-eQTL 4.88e-01 0.0527 0.0759 0.733 B_Naive1 L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 6.73e-01 0.0411 0.0974 0.733 B_Naive1 L2
ENSG00000059758 CDK17 354356 sc-eQTL 1.12e-01 0.127 0.0795 0.734 B_Naive2 L2
ENSG00000111144 LTA4H 711316 sc-eQTL 5.93e-01 0.0405 0.0757 0.734 B_Naive2 L2
ENSG00000111145 ELK3 560461 sc-eQTL 5.61e-01 -0.052 0.0893 0.734 B_Naive2 L2
ENSG00000139343 SNRPF 895908 sc-eQTL 3.84e-01 0.0772 0.0885 0.734 B_Naive2 L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.94e-01 -0.0723 0.105 0.734 B_Naive2 L2
ENSG00000059758 CDK17 354356 sc-eQTL 4.66e-01 -0.0537 0.0735 0.734 CD4_CTL L2
ENSG00000111144 LTA4H 711316 sc-eQTL 3.10e-01 -0.105 0.104 0.734 CD4_CTL L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.63e-01 0.0459 0.105 0.734 CD4_CTL L2
ENSG00000139343 SNRPF 895908 sc-eQTL 7.27e-01 0.0319 0.0914 0.734 CD4_CTL L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 5.98e-01 -0.0558 0.106 0.734 CD4_CTL L2
ENSG00000059758 CDK17 354356 sc-eQTL 7.65e-01 -0.0137 0.0458 0.733 CD4_Naive L2
ENSG00000111144 LTA4H 711316 sc-eQTL 2.24e-01 -0.0804 0.066 0.733 CD4_Naive L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.31e-01 -0.0319 0.0662 0.733 CD4_Naive L2
ENSG00000139343 SNRPF 895908 sc-eQTL 3.13e-01 -0.0593 0.0587 0.733 CD4_Naive L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.61e-01 0.0814 0.0723 0.733 CD4_Naive L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.02e-01 -0.0563 0.0441 0.733 CD4_TCM L2
ENSG00000111144 LTA4H 711316 sc-eQTL 8.68e-01 0.0125 0.075 0.733 CD4_TCM L2
ENSG00000111145 ELK3 560461 sc-eQTL 7.45e-01 0.024 0.0738 0.733 CD4_TCM L2
ENSG00000139343 SNRPF 895908 sc-eQTL 2.66e-01 -0.0674 0.0604 0.733 CD4_TCM L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.53e-01 0.0621 0.0826 0.733 CD4_TCM L2
ENSG00000059758 CDK17 354356 sc-eQTL 9.33e-01 -0.0046 0.0548 0.733 CD4_TEM L2
ENSG00000111144 LTA4H 711316 sc-eQTL 3.61e-01 0.0772 0.0844 0.733 CD4_TEM L2
ENSG00000111145 ELK3 560461 sc-eQTL 7.75e-01 0.0224 0.0785 0.733 CD4_TEM L2
ENSG00000139343 SNRPF 895908 sc-eQTL 4.35e-02 -0.165 0.0815 0.733 CD4_TEM L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.52e-01 0.0308 0.0975 0.733 CD4_TEM L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.47e-01 -0.0612 0.0528 0.733 CD8_CTL L2
ENSG00000111144 LTA4H 711316 sc-eQTL 2.45e-01 0.111 0.0953 0.733 CD8_CTL L2
ENSG00000111145 ELK3 560461 sc-eQTL 1.30e-02 0.215 0.0858 0.733 CD8_CTL L2
ENSG00000139343 SNRPF 895908 sc-eQTL 2.95e-01 -0.0839 0.0798 0.733 CD8_CTL L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 8.93e-01 -0.0121 0.0898 0.733 CD8_CTL L2
ENSG00000059758 CDK17 354356 sc-eQTL 1.87e-02 -0.149 0.0628 0.733 CD8_Naive L2
ENSG00000111144 LTA4H 711316 sc-eQTL 9.41e-02 0.127 0.0757 0.733 CD8_Naive L2
ENSG00000111145 ELK3 560461 sc-eQTL 3.39e-01 -0.0771 0.0804 0.733 CD8_Naive L2
ENSG00000139343 SNRPF 895908 sc-eQTL 5.54e-01 0.043 0.0724 0.733 CD8_Naive L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.67e-01 0.0628 0.0862 0.733 CD8_Naive L2
ENSG00000059758 CDK17 354356 sc-eQTL 8.72e-01 0.0112 0.0691 0.729 CD8_TCM L2
ENSG00000111144 LTA4H 711316 sc-eQTL 7.35e-01 -0.0344 0.102 0.729 CD8_TCM L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.85e-01 -0.035 0.086 0.729 CD8_TCM L2
ENSG00000139343 SNRPF 895908 sc-eQTL 8.28e-01 0.0215 0.099 0.729 CD8_TCM L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 3.19e-01 -0.0967 0.0967 0.729 CD8_TCM L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.01e-02 -0.196 0.0837 0.737 CD8_TEM L2
ENSG00000111144 LTA4H 711316 sc-eQTL 6.75e-01 -0.0435 0.104 0.737 CD8_TEM L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.43e-01 0.0473 0.102 0.737 CD8_TEM L2
ENSG00000139343 SNRPF 895908 sc-eQTL 4.00e-01 0.0799 0.0948 0.737 CD8_TEM L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.08e-01 0.0386 0.103 0.737 CD8_TEM L2
ENSG00000059758 CDK17 354356 sc-eQTL 8.65e-01 0.00982 0.0576 0.732 MAIT L2
ENSG00000074527 NTN4 963684 sc-eQTL 2.81e-02 -0.17 0.0768 0.732 MAIT L2
ENSG00000111144 LTA4H 711316 sc-eQTL 2.22e-01 -0.109 0.0887 0.732 MAIT L2
ENSG00000111145 ELK3 560461 sc-eQTL 4.74e-01 -0.0535 0.0746 0.732 MAIT L2
ENSG00000139343 SNRPF 895908 sc-eQTL 1.48e-01 -0.125 0.0861 0.732 MAIT L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.24e-01 -0.0343 0.0972 0.732 MAIT L2
ENSG00000188596 CFAP54 265265 sc-eQTL 4.06e-01 -0.08 0.0962 0.732 MAIT L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.24e-01 0.0756 0.062 0.738 NK_CD56bright L2
ENSG00000111144 LTA4H 711316 sc-eQTL 3.91e-01 0.079 0.0918 0.738 NK_CD56bright L2
ENSG00000111145 ELK3 560461 sc-eQTL 9.11e-01 0.011 0.0976 0.738 NK_CD56bright L2
ENSG00000139343 SNRPF 895908 sc-eQTL 9.71e-01 0.0037 0.102 0.738 NK_CD56bright L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.50e-01 -0.0779 0.103 0.738 NK_CD56bright L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.00e-01 0.0666 0.0518 0.735 NK_CD56dim L2
ENSG00000111144 LTA4H 711316 sc-eQTL 3.83e-01 -0.082 0.0937 0.735 NK_CD56dim L2
ENSG00000111145 ELK3 560461 sc-eQTL 8.56e-01 0.0151 0.0831 0.735 NK_CD56dim L2
ENSG00000139343 SNRPF 895908 sc-eQTL 1.95e-01 -0.102 0.0788 0.735 NK_CD56dim L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.77e-01 -0.123 0.0907 0.735 NK_CD56dim L2
ENSG00000059758 CDK17 354356 sc-eQTL 8.56e-01 0.0147 0.0814 0.74 NK_HLA L2
ENSG00000111144 LTA4H 711316 sc-eQTL 1.19e-01 -0.166 0.106 0.74 NK_HLA L2
ENSG00000111145 ELK3 560461 sc-eQTL 2.53e-01 0.113 0.0986 0.74 NK_HLA L2
ENSG00000139343 SNRPF 895908 sc-eQTL 2.61e-01 0.116 0.103 0.74 NK_HLA L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 9.06e-02 -0.165 0.0969 0.74 NK_HLA L2
ENSG00000059758 CDK17 354356 sc-eQTL 9.67e-01 0.00232 0.0563 0.735 NK_cytokine L2
ENSG00000111144 LTA4H 711316 sc-eQTL 3.44e-01 0.0901 0.0949 0.735 NK_cytokine L2
ENSG00000111145 ELK3 560461 sc-eQTL 4.93e-01 0.0624 0.091 0.735 NK_cytokine L2
ENSG00000139343 SNRPF 895908 sc-eQTL 9.46e-01 0.00524 0.0771 0.735 NK_cytokine L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.00e-01 0.0368 0.0953 0.735 NK_cytokine L2
ENSG00000059758 CDK17 354356 sc-eQTL 6.82e-01 -0.0457 0.111 0.733 PB L2
ENSG00000111144 LTA4H 711316 sc-eQTL 1.67e-01 -0.135 0.0975 0.733 PB L2
ENSG00000111145 ELK3 560461 sc-eQTL 8.74e-01 0.02 0.126 0.733 PB L2
ENSG00000139343 SNRPF 895908 sc-eQTL 1.34e-01 -0.184 0.122 0.733 PB L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.95e-01 0.0997 0.146 0.733 PB L2
ENSG00000059758 CDK17 354356 sc-eQTL 3.76e-01 0.0554 0.0624 0.73 Pro_T L2
ENSG00000074527 NTN4 963684 sc-eQTL 1.31e-01 -0.106 0.0698 0.73 Pro_T L2
ENSG00000111144 LTA4H 711316 sc-eQTL 4.29e-01 -0.0653 0.0825 0.73 Pro_T L2
ENSG00000111145 ELK3 560461 sc-eQTL 7.33e-01 0.0341 0.0999 0.73 Pro_T L2
ENSG00000139343 SNRPF 895908 sc-eQTL 6.94e-01 -0.0248 0.063 0.73 Pro_T L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.05e-01 0.116 0.0911 0.73 Pro_T L2
ENSG00000188596 CFAP54 265265 sc-eQTL 3.81e-01 0.0648 0.0739 0.73 Pro_T L2
ENSG00000059758 CDK17 354356 sc-eQTL 7.52e-01 0.0219 0.0691 0.733 Treg L2
ENSG00000111144 LTA4H 711316 sc-eQTL 7.55e-01 -0.0273 0.0875 0.733 Treg L2
ENSG00000111145 ELK3 560461 sc-eQTL 2.67e-01 -0.0879 0.0791 0.733 Treg L2
ENSG00000139343 SNRPF 895908 sc-eQTL 5.01e-01 0.0619 0.0917 0.733 Treg L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.80e-03 0.317 0.1 0.733 Treg L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.19e-01 -0.109 0.0885 0.739 cDC L2
ENSG00000084110 HAL 758471 sc-eQTL 4.72e-01 -0.0664 0.0922 0.739 cDC L2
ENSG00000111144 LTA4H 711316 sc-eQTL 1.16e-01 0.124 0.0786 0.739 cDC L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.37e-01 -0.0494 0.104 0.739 cDC L2
ENSG00000139343 SNRPF 895908 sc-eQTL 4.74e-01 0.0626 0.0873 0.739 cDC L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 5.09e-01 -0.0705 0.106 0.739 cDC L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 2.62e-01 -0.101 0.0895 0.739 cDC L2
ENSG00000059758 CDK17 354356 sc-eQTL 6.72e-01 -0.0311 0.0734 0.733 cMono_IL1B L2
ENSG00000084110 HAL 758471 sc-eQTL 6.35e-01 0.038 0.08 0.733 cMono_IL1B L2
ENSG00000111144 LTA4H 711316 sc-eQTL 7.67e-01 0.0256 0.0865 0.733 cMono_IL1B L2
ENSG00000111145 ELK3 560461 sc-eQTL 6.88e-01 -0.0268 0.0666 0.733 cMono_IL1B L2
ENSG00000139343 SNRPF 895908 sc-eQTL 6.57e-01 -0.0306 0.0687 0.733 cMono_IL1B L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.44e-03 -0.267 0.0929 0.733 cMono_IL1B L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 3.67e-01 0.0796 0.0882 0.733 cMono_IL1B L2
ENSG00000059758 CDK17 354356 sc-eQTL 8.14e-01 -0.0196 0.0833 0.733 cMono_S100A L2
ENSG00000084110 HAL 758471 sc-eQTL 4.68e-01 -0.0679 0.0933 0.733 cMono_S100A L2
ENSG00000111144 LTA4H 711316 sc-eQTL 6.38e-01 0.044 0.0933 0.733 cMono_S100A L2
ENSG00000111145 ELK3 560461 sc-eQTL 5.94e-01 0.0405 0.076 0.733 cMono_S100A L2
ENSG00000139343 SNRPF 895908 sc-eQTL 5.47e-01 0.0453 0.0751 0.733 cMono_S100A L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.73e-01 -0.138 0.101 0.733 cMono_S100A L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 1.75e-01 0.129 0.0951 0.733 cMono_S100A L2
ENSG00000059758 CDK17 354356 sc-eQTL 8.39e-01 0.0168 0.0828 0.733 gdT L2
ENSG00000074527 NTN4 963684 sc-eQTL 2.68e-01 -0.105 0.0947 0.733 gdT L2
ENSG00000111144 LTA4H 711316 sc-eQTL 2.55e-01 -0.141 0.123 0.733 gdT L2
ENSG00000111145 ELK3 560461 sc-eQTL 1.43e-01 0.168 0.114 0.733 gdT L2
ENSG00000139343 SNRPF 895908 sc-eQTL 9.63e-01 0.00508 0.111 0.733 gdT L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 5.50e-01 0.0731 0.122 0.733 gdT L2
ENSG00000188596 CFAP54 265265 sc-eQTL 5.00e-01 0.0723 0.107 0.733 gdT L2
ENSG00000059758 CDK17 354356 sc-eQTL 1.41e-01 -0.14 0.0947 0.733 intMono L2
ENSG00000084110 HAL 758471 sc-eQTL 8.59e-01 -0.0171 0.0963 0.733 intMono L2
ENSG00000111144 LTA4H 711316 sc-eQTL 7.25e-01 0.0347 0.0987 0.733 intMono L2
ENSG00000111145 ELK3 560461 sc-eQTL 4.29e-01 0.0696 0.0878 0.733 intMono L2
ENSG00000139343 SNRPF 895908 sc-eQTL 2.75e-03 -0.279 0.092 0.733 intMono L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.11e-01 -0.155 0.0971 0.733 intMono L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 5.26e-01 0.0624 0.0982 0.733 intMono L2
ENSG00000059758 CDK17 354356 sc-eQTL 2.55e-01 0.0846 0.0741 0.726 ncMono L2
ENSG00000084110 HAL 758471 sc-eQTL 2.50e-01 -0.0954 0.0827 0.726 ncMono L2
ENSG00000111144 LTA4H 711316 sc-eQTL 5.31e-01 -0.058 0.0924 0.726 ncMono L2
ENSG00000111145 ELK3 560461 sc-eQTL 7.97e-01 0.0205 0.0794 0.726 ncMono L2
ENSG00000139343 SNRPF 895908 sc-eQTL 4.28e-01 -0.0644 0.081 0.726 ncMono L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.52e-01 -0.0988 0.0859 0.726 ncMono L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 4.66e-01 -0.0718 0.0982 0.726 ncMono L2
ENSG00000059758 CDK17 354356 sc-eQTL 7.25e-02 -0.178 0.0987 0.732 pDC L2
ENSG00000084110 HAL 758471 sc-eQTL 9.61e-01 -0.00416 0.0842 0.732 pDC L2
ENSG00000111144 LTA4H 711316 sc-eQTL 6.60e-01 0.0415 0.0942 0.732 pDC L2
ENSG00000111145 ELK3 560461 sc-eQTL 1.43e-01 -0.168 0.115 0.732 pDC L2
ENSG00000139343 SNRPF 895908 sc-eQTL 3.96e-01 -0.0854 0.1 0.732 pDC L2
ENSG00000139350 NEDD1 -152387 sc-eQTL 8.39e-01 -0.0225 0.111 0.732 pDC L2
ENSG00000257715 AC007298.1 729513 sc-eQTL 8.99e-01 -0.0121 0.0952 0.732 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 354356 sc-eQTL 6.53e-02 -0.121 0.0653 0.733 B_Memory LOneK1K
ENSG00000111144 LTA4H 711316 sc-eQTL 3.24e-01 -0.0674 0.0682 0.733 B_Memory LOneK1K
ENSG00000111145 ELK3 560461 sc-eQTL 4.92e-01 0.0537 0.078 0.733 B_Memory LOneK1K
ENSG00000139343 SNRPF 895908 sc-eQTL 8.54e-02 -0.13 0.0752 0.733 B_Memory LOneK1K
ENSG00000139350 NEDD1 -152387 sc-eQTL 4.88e-01 0.0688 0.0992 0.733 B_Memory LOneK1K
ENSG00000059758 CDK17 354356 sc-eQTL 8.96e-01 -0.00738 0.0566 0.733 B_Naive LOneK1K
ENSG00000111144 LTA4H 711316 sc-eQTL 4.64e-01 0.0466 0.0634 0.733 B_Naive LOneK1K
ENSG00000111145 ELK3 560461 sc-eQTL 1.37e-01 -0.107 0.0719 0.733 B_Naive LOneK1K
ENSG00000139343 SNRPF 895908 sc-eQTL 5.16e-01 0.0473 0.0727 0.733 B_Naive LOneK1K
ENSG00000139350 NEDD1 -152387 sc-eQTL 7.50e-01 -0.0307 0.0963 0.733 B_Naive LOneK1K
ENSG00000059758 CDK17 354356 sc-eQTL 5.75e-01 -0.0373 0.0663 0.733 CD14_Mono LOneK1K
ENSG00000084110 HAL 758471 sc-eQTL 5.39e-01 -0.0494 0.0802 0.733 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 711316 sc-eQTL 5.38e-01 0.0543 0.0881 0.733 CD14_Mono LOneK1K
ENSG00000111145 ELK3 560461 sc-eQTL 8.26e-01 0.014 0.0637 0.733 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 895908 sc-eQTL 8.46e-01 0.012 0.0615 0.733 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.10e-02 -0.244 0.0949 0.733 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 729513 sc-eQTL 8.94e-02 0.151 0.0887 0.733 CD14_Mono LOneK1K
ENSG00000059758 CDK17 354356 sc-eQTL 9.97e-01 -0.00029 0.0687 0.733 CD16_Mono LOneK1K
ENSG00000084110 HAL 758471 sc-eQTL 3.83e-01 -0.0708 0.0811 0.733 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 711316 sc-eQTL 8.50e-01 -0.017 0.09 0.733 CD16_Mono LOneK1K
ENSG00000111145 ELK3 560461 sc-eQTL 8.59e-01 -0.0118 0.0666 0.733 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 895908 sc-eQTL 3.41e-02 -0.145 0.068 0.733 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -152387 sc-eQTL 1.08e-01 -0.141 0.0876 0.733 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 729513 sc-eQTL 7.30e-01 -0.0322 0.0932 0.733 CD16_Mono LOneK1K
ENSG00000059758 CDK17 354356 sc-eQTL 6.88e-01 0.0196 0.0486 0.735 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 711316 sc-eQTL 3.96e-01 -0.0719 0.0845 0.735 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 560461 sc-eQTL 5.27e-01 0.049 0.0774 0.735 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 895908 sc-eQTL 5.37e-01 -0.0409 0.0662 0.735 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -152387 sc-eQTL 2.52e-01 -0.0946 0.0824 0.735 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -152387 eQTL 3.39e-14 -0.198 0.0257 0.0 0.0 0.264
ENSG00000188596 CFAP54 265261 eQTL 3.39e-06 -0.102 0.0219 0.0 0.0 0.264

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -152387 4.32e-06 3.85e-06 8.75e-07 2.24e-06 1.62e-06 1.19e-06 3.08e-06 1.04e-06 4.55e-06 2.07e-06 4.2e-06 3.43e-06 6.75e-06 1.62e-06 1.43e-06 3.4e-06 1.97e-06 2.9e-06 1.41e-06 1.09e-06 2.95e-06 4.42e-06 3.49e-06 1.41e-06 4.89e-06 1.85e-06 2.62e-06 1.55e-06 4.42e-06 3.64e-06 1.96e-06 4.2e-07 5.47e-07 1.61e-06 1.93e-06 1.16e-06 1.08e-06 4.42e-07 8.68e-07 5.02e-07 8.36e-07 4.65e-06 4.34e-07 1.55e-07 7.57e-07 6.75e-07 9.75e-07 5.06e-07 5.14e-07
ENSG00000188596 CFAP54 265261 1.4e-06 1.34e-06 3e-07 1.27e-06 4.83e-07 6.68e-07 1.23e-06 4.99e-07 1.78e-06 7.41e-07 2.02e-06 1.29e-06 2.59e-06 3.95e-07 3.4e-07 1.1e-06 1.14e-06 1.27e-06 5.54e-07 6.46e-07 6.18e-07 1.96e-06 1.54e-06 9.49e-07 2.34e-06 1.06e-06 1.04e-06 9.81e-07 1.75e-06 1.24e-06 7.54e-07 2.66e-07 3.78e-07 9.63e-07 6.46e-07 6.03e-07 7.56e-07 3.44e-07 6.03e-07 2.17e-07 3.05e-07 2.12e-06 3.53e-07 1.25e-07 3.4e-07 3.22e-07 3.77e-07 1.96e-07 2.27e-07