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Genes within 1Mb (chr12:96748773:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 348293 sc-eQTL 2.15e-01 -0.0623 0.0501 0.735 B L1
ENSG00000111144 LTA4H 705253 sc-eQTL 3.56e-01 0.0577 0.0624 0.735 B L1
ENSG00000111145 ELK3 554398 sc-eQTL 9.08e-01 -0.00773 0.0665 0.735 B L1
ENSG00000139343 SNRPF 889845 sc-eQTL 7.08e-01 -0.0227 0.0604 0.735 B L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.32e-01 -0.0694 0.0881 0.735 B L1
ENSG00000059758 CDK17 348293 sc-eQTL 4.55e-01 -0.031 0.0415 0.735 CD4T L1
ENSG00000111144 LTA4H 705253 sc-eQTL 4.39e-01 -0.0442 0.0569 0.735 CD4T L1
ENSG00000111145 ELK3 554398 sc-eQTL 5.40e-01 -0.0378 0.0617 0.735 CD4T L1
ENSG00000139343 SNRPF 889845 sc-eQTL 2.52e-01 -0.0618 0.0538 0.735 CD4T L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.40e-02 0.149 0.0657 0.735 CD4T L1
ENSG00000059758 CDK17 348293 sc-eQTL 2.11e-03 -0.128 0.0413 0.735 CD8T L1
ENSG00000111144 LTA4H 705253 sc-eQTL 1.92e-01 0.0591 0.0451 0.735 CD8T L1
ENSG00000111145 ELK3 554398 sc-eQTL 8.26e-01 -0.015 0.0682 0.735 CD8T L1
ENSG00000139343 SNRPF 889845 sc-eQTL 7.89e-01 0.015 0.0559 0.735 CD8T L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 8.01e-01 0.0188 0.0743 0.735 CD8T L1
ENSG00000059758 CDK17 348293 sc-eQTL 5.19e-02 -0.162 0.0826 0.736 DC L1
ENSG00000084110 HAL 752408 sc-eQTL 1.14e-01 -0.15 0.0943 0.736 DC L1
ENSG00000111144 LTA4H 705253 sc-eQTL 7.79e-01 0.0219 0.0776 0.736 DC L1
ENSG00000111145 ELK3 554398 sc-eQTL 6.46e-01 -0.0437 0.095 0.736 DC L1
ENSG00000139343 SNRPF 889845 sc-eQTL 9.67e-01 0.00331 0.0791 0.736 DC L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 6.20e-01 -0.0504 0.101 0.736 DC L1
ENSG00000257715 AC007298.1 723450 sc-eQTL 2.79e-02 -0.2 0.0905 0.736 DC L1
ENSG00000059758 CDK17 348293 sc-eQTL 6.86e-01 0.0256 0.0633 0.735 Mono L1
ENSG00000084110 HAL 752408 sc-eQTL 3.64e-01 -0.0724 0.0796 0.735 Mono L1
ENSG00000111144 LTA4H 705253 sc-eQTL 6.71e-01 0.0383 0.0901 0.735 Mono L1
ENSG00000111145 ELK3 554398 sc-eQTL 7.30e-01 0.0209 0.0605 0.735 Mono L1
ENSG00000139343 SNRPF 889845 sc-eQTL 5.93e-01 -0.0305 0.057 0.735 Mono L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.30e-03 -0.248 0.0859 0.735 Mono L1
ENSG00000257715 AC007298.1 723450 sc-eQTL 1.60e-01 0.119 0.0845 0.735 Mono L1
ENSG00000059758 CDK17 348293 sc-eQTL 5.46e-01 0.0292 0.0483 0.734 NK L1
ENSG00000111144 LTA4H 705253 sc-eQTL 7.78e-01 -0.0231 0.082 0.734 NK L1
ENSG00000111145 ELK3 554398 sc-eQTL 5.95e-01 0.0414 0.0778 0.734 NK L1
ENSG00000139343 SNRPF 889845 sc-eQTL 5.17e-01 -0.0418 0.0645 0.734 NK L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.00e-01 -0.105 0.0814 0.734 NK L1
ENSG00000059758 CDK17 348293 sc-eQTL 3.01e-01 0.0413 0.0399 0.735 Other_T L1
ENSG00000074527 NTN4 957621 sc-eQTL 6.86e-02 -0.134 0.0733 0.735 Other_T L1
ENSG00000111144 LTA4H 705253 sc-eQTL 6.14e-02 -0.156 0.0828 0.735 Other_T L1
ENSG00000111145 ELK3 554398 sc-eQTL 9.71e-01 -0.00237 0.0652 0.735 Other_T L1
ENSG00000139343 SNRPF 889845 sc-eQTL 8.72e-01 -0.00976 0.0606 0.735 Other_T L1
ENSG00000139350 NEDD1 -158450 sc-eQTL 7.61e-01 -0.0281 0.0922 0.735 Other_T L1
ENSG00000188596 CFAP54 259202 sc-eQTL 3.73e-01 0.0852 0.0953 0.735 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 348293 sc-eQTL 8.03e-01 0.0231 0.0921 0.73 B_Activated L2
ENSG00000111144 LTA4H 705253 sc-eQTL 7.48e-01 -0.0335 0.104 0.73 B_Activated L2
ENSG00000111145 ELK3 554398 sc-eQTL 9.85e-01 0.00213 0.11 0.73 B_Activated L2
ENSG00000139343 SNRPF 889845 sc-eQTL 8.52e-01 0.0195 0.104 0.73 B_Activated L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 5.91e-01 -0.0586 0.109 0.73 B_Activated L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.60e-01 -0.112 0.0797 0.734 B_Intermediate L2
ENSG00000111144 LTA4H 705253 sc-eQTL 4.84e-01 -0.0543 0.0774 0.734 B_Intermediate L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.18e-01 -0.0565 0.0873 0.734 B_Intermediate L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.18e-01 -0.0563 0.087 0.734 B_Intermediate L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.36e-01 -0.0794 0.102 0.734 B_Intermediate L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.87e-02 -0.131 0.0766 0.739 B_Memory L2
ENSG00000111144 LTA4H 705253 sc-eQTL 6.57e-02 -0.163 0.0883 0.739 B_Memory L2
ENSG00000111145 ELK3 554398 sc-eQTL 1.56e-01 0.124 0.0871 0.739 B_Memory L2
ENSG00000139343 SNRPF 889845 sc-eQTL 9.31e-02 -0.155 0.0921 0.739 B_Memory L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.80e-01 0.111 0.102 0.739 B_Memory L2
ENSG00000059758 CDK17 348293 sc-eQTL 2.32e-01 -0.0753 0.0628 0.735 B_Naive1 L2
ENSG00000111144 LTA4H 705253 sc-eQTL 9.42e-01 -0.00482 0.066 0.735 B_Naive1 L2
ENSG00000111145 ELK3 554398 sc-eQTL 3.89e-01 -0.0673 0.0779 0.735 B_Naive1 L2
ENSG00000139343 SNRPF 889845 sc-eQTL 3.60e-01 0.0695 0.0757 0.735 B_Naive1 L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 6.35e-01 0.0462 0.0973 0.735 B_Naive1 L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.31e-01 0.12 0.0795 0.736 B_Naive2 L2
ENSG00000111144 LTA4H 705253 sc-eQTL 6.40e-01 0.0354 0.0757 0.736 B_Naive2 L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.48e-01 -0.0536 0.0892 0.736 B_Naive2 L2
ENSG00000139343 SNRPF 889845 sc-eQTL 4.71e-01 0.0639 0.0885 0.736 B_Naive2 L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.92e-01 -0.0724 0.105 0.736 B_Naive2 L2
ENSG00000059758 CDK17 348293 sc-eQTL 4.78e-01 -0.0522 0.0734 0.736 CD4_CTL L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.59e-01 -0.117 0.103 0.736 CD4_CTL L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.74e-01 0.0301 0.105 0.736 CD4_CTL L2
ENSG00000139343 SNRPF 889845 sc-eQTL 6.58e-01 0.0405 0.0912 0.736 CD4_CTL L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 6.35e-01 -0.0501 0.105 0.736 CD4_CTL L2
ENSG00000059758 CDK17 348293 sc-eQTL 6.61e-01 -0.0201 0.0458 0.735 CD4_Naive L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.56e-01 -0.0752 0.066 0.735 CD4_Naive L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.63e-01 -0.0383 0.0662 0.735 CD4_Naive L2
ENSG00000139343 SNRPF 889845 sc-eQTL 3.70e-01 -0.0528 0.0587 0.735 CD4_Naive L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.87e-01 0.0772 0.0723 0.735 CD4_Naive L2
ENSG00000059758 CDK17 348293 sc-eQTL 2.44e-01 -0.0515 0.0441 0.735 CD4_TCM L2
ENSG00000111144 LTA4H 705253 sc-eQTL 7.49e-01 0.024 0.075 0.735 CD4_TCM L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.59e-01 0.0227 0.0738 0.735 CD4_TCM L2
ENSG00000139343 SNRPF 889845 sc-eQTL 2.78e-01 -0.0656 0.0603 0.735 CD4_TCM L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.44e-01 0.0633 0.0826 0.735 CD4_TCM L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.81e-01 -0.00815 0.0546 0.735 CD4_TEM L2
ENSG00000111144 LTA4H 705253 sc-eQTL 3.45e-01 0.0797 0.0842 0.735 CD4_TEM L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.38e-01 0.0262 0.0783 0.735 CD4_TEM L2
ENSG00000139343 SNRPF 889845 sc-eQTL 4.18e-02 -0.166 0.0812 0.735 CD4_TEM L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 6.36e-01 0.0462 0.0972 0.735 CD4_TEM L2
ENSG00000059758 CDK17 348293 sc-eQTL 3.40e-01 -0.0505 0.0528 0.735 CD8_CTL L2
ENSG00000111144 LTA4H 705253 sc-eQTL 1.88e-01 0.126 0.0951 0.735 CD8_CTL L2
ENSG00000111145 ELK3 554398 sc-eQTL 1.61e-02 0.208 0.0858 0.735 CD8_CTL L2
ENSG00000139343 SNRPF 889845 sc-eQTL 3.67e-01 -0.0722 0.0798 0.735 CD8_CTL L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 9.60e-01 -0.00455 0.0897 0.735 CD8_CTL L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.21e-02 -0.158 0.0626 0.735 CD8_Naive L2
ENSG00000111144 LTA4H 705253 sc-eQTL 8.22e-02 0.132 0.0755 0.735 CD8_Naive L2
ENSG00000111145 ELK3 554398 sc-eQTL 2.78e-01 -0.0874 0.0803 0.735 CD8_Naive L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.20e-01 0.0466 0.0723 0.735 CD8_Naive L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 5.20e-01 0.0554 0.0861 0.735 CD8_Naive L2
ENSG00000059758 CDK17 348293 sc-eQTL 9.50e-01 -0.00435 0.0689 0.731 CD8_TCM L2
ENSG00000111144 LTA4H 705253 sc-eQTL 7.48e-01 -0.0325 0.101 0.731 CD8_TCM L2
ENSG00000111145 ELK3 554398 sc-eQTL 6.08e-01 -0.044 0.0857 0.731 CD8_TCM L2
ENSG00000139343 SNRPF 889845 sc-eQTL 8.27e-01 0.0216 0.0987 0.731 CD8_TCM L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.28e-01 -0.117 0.0963 0.731 CD8_TCM L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.74e-02 -0.2 0.0834 0.74 CD8_TEM L2
ENSG00000111144 LTA4H 705253 sc-eQTL 7.32e-01 -0.0356 0.104 0.74 CD8_TEM L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.70e-01 0.0578 0.102 0.74 CD8_TEM L2
ENSG00000139343 SNRPF 889845 sc-eQTL 4.52e-01 0.0712 0.0945 0.74 CD8_TEM L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 6.72e-01 0.0435 0.103 0.74 CD8_TEM L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.24e-01 0.0128 0.0576 0.734 MAIT L2
ENSG00000074527 NTN4 957621 sc-eQTL 3.62e-02 -0.162 0.0768 0.734 MAIT L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.61e-01 -0.0999 0.0886 0.734 MAIT L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.58e-01 -0.0437 0.0746 0.734 MAIT L2
ENSG00000139343 SNRPF 889845 sc-eQTL 1.24e-01 -0.133 0.086 0.734 MAIT L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 8.09e-01 -0.0235 0.0971 0.734 MAIT L2
ENSG00000188596 CFAP54 259202 sc-eQTL 3.58e-01 -0.0885 0.096 0.734 MAIT L2
ENSG00000059758 CDK17 348293 sc-eQTL 2.02e-01 0.0794 0.0621 0.74 NK_CD56bright L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.68e-01 0.102 0.0919 0.74 NK_CD56bright L2
ENSG00000111145 ELK3 554398 sc-eQTL 8.33e-01 0.0206 0.0978 0.74 NK_CD56bright L2
ENSG00000139343 SNRPF 889845 sc-eQTL 8.23e-01 0.0229 0.102 0.74 NK_CD56bright L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.26e-01 -0.0822 0.103 0.74 NK_CD56bright L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.47e-01 0.0754 0.0518 0.737 NK_CD56dim L2
ENSG00000111144 LTA4H 705253 sc-eQTL 4.88e-01 -0.0652 0.0939 0.737 NK_CD56dim L2
ENSG00000111145 ELK3 554398 sc-eQTL 8.96e-01 0.0109 0.0832 0.737 NK_CD56dim L2
ENSG00000139343 SNRPF 889845 sc-eQTL 1.94e-01 -0.103 0.0789 0.737 NK_CD56dim L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.79e-01 -0.123 0.0908 0.737 NK_CD56dim L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.98e-01 0.0104 0.0814 0.742 NK_HLA L2
ENSG00000111144 LTA4H 705253 sc-eQTL 1.13e-01 -0.169 0.106 0.742 NK_HLA L2
ENSG00000111145 ELK3 554398 sc-eQTL 2.41e-01 0.116 0.0987 0.742 NK_HLA L2
ENSG00000139343 SNRPF 889845 sc-eQTL 2.37e-01 0.122 0.103 0.742 NK_HLA L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 9.94e-02 -0.16 0.0969 0.742 NK_HLA L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.57e-01 0.0102 0.0563 0.737 NK_cytokine L2
ENSG00000111144 LTA4H 705253 sc-eQTL 4.18e-01 0.077 0.095 0.737 NK_cytokine L2
ENSG00000111145 ELK3 554398 sc-eQTL 6.24e-01 0.0446 0.0911 0.737 NK_cytokine L2
ENSG00000139343 SNRPF 889845 sc-eQTL 9.18e-01 0.00792 0.0772 0.737 NK_cytokine L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 7.01e-01 0.0366 0.0954 0.737 NK_cytokine L2
ENSG00000059758 CDK17 348293 sc-eQTL 6.30e-01 -0.0538 0.112 0.737 PB L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.10e-01 -0.123 0.0978 0.737 PB L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.78e-01 0.0357 0.126 0.737 PB L2
ENSG00000139343 SNRPF 889845 sc-eQTL 1.18e-01 -0.192 0.122 0.737 PB L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 5.24e-01 0.0934 0.146 0.737 PB L2
ENSG00000059758 CDK17 348293 sc-eQTL 4.13e-01 0.0511 0.0623 0.733 Pro_T L2
ENSG00000074527 NTN4 957621 sc-eQTL 1.94e-01 -0.0911 0.0698 0.733 Pro_T L2
ENSG00000111144 LTA4H 705253 sc-eQTL 4.29e-01 -0.0652 0.0823 0.733 Pro_T L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.28e-01 0.0347 0.0997 0.733 Pro_T L2
ENSG00000139343 SNRPF 889845 sc-eQTL 7.02e-01 -0.0241 0.0628 0.733 Pro_T L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.10e-01 0.114 0.091 0.733 Pro_T L2
ENSG00000188596 CFAP54 259202 sc-eQTL 3.87e-01 0.0638 0.0737 0.733 Pro_T L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.21e-01 0.0156 0.069 0.735 Treg L2
ENSG00000111144 LTA4H 705253 sc-eQTL 7.15e-01 -0.032 0.0873 0.735 Treg L2
ENSG00000111145 ELK3 554398 sc-eQTL 3.18e-01 -0.079 0.079 0.735 Treg L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.11e-01 0.0603 0.0916 0.735 Treg L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.55e-03 0.32 0.0999 0.735 Treg L2
ENSG00000059758 CDK17 348293 sc-eQTL 3.38e-01 -0.0851 0.0885 0.741 cDC L2
ENSG00000084110 HAL 752408 sc-eQTL 4.42e-01 -0.071 0.0921 0.741 cDC L2
ENSG00000111144 LTA4H 705253 sc-eQTL 1.07e-01 0.127 0.0785 0.741 cDC L2
ENSG00000111145 ELK3 554398 sc-eQTL 6.69e-01 -0.0447 0.104 0.741 cDC L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.03e-01 0.0586 0.0873 0.741 cDC L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 4.46e-01 -0.0811 0.106 0.741 cDC L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 2.43e-01 -0.105 0.0894 0.741 cDC L2
ENSG00000059758 CDK17 348293 sc-eQTL 6.64e-01 -0.032 0.0734 0.735 cMono_IL1B L2
ENSG00000084110 HAL 752408 sc-eQTL 8.11e-01 0.0192 0.0801 0.735 cMono_IL1B L2
ENSG00000111144 LTA4H 705253 sc-eQTL 6.59e-01 0.0382 0.0865 0.735 cMono_IL1B L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.40e-01 -0.0221 0.0666 0.735 cMono_IL1B L2
ENSG00000139343 SNRPF 889845 sc-eQTL 6.39e-01 -0.0322 0.0687 0.735 cMono_IL1B L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 3.61e-03 -0.273 0.0928 0.735 cMono_IL1B L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 3.01e-01 0.0914 0.0881 0.735 cMono_IL1B L2
ENSG00000059758 CDK17 348293 sc-eQTL 7.95e-01 -0.0216 0.0832 0.735 cMono_S100A L2
ENSG00000084110 HAL 752408 sc-eQTL 5.19e-01 -0.0604 0.0933 0.735 cMono_S100A L2
ENSG00000111144 LTA4H 705253 sc-eQTL 5.69e-01 0.0531 0.0933 0.735 cMono_S100A L2
ENSG00000111145 ELK3 554398 sc-eQTL 5.90e-01 0.041 0.076 0.735 cMono_S100A L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.39e-01 0.0463 0.0751 0.735 cMono_S100A L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.68e-01 -0.14 0.101 0.735 cMono_S100A L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 1.43e-01 0.14 0.095 0.735 cMono_S100A L2
ENSG00000059758 CDK17 348293 sc-eQTL 8.39e-01 0.0168 0.0828 0.733 gdT L2
ENSG00000074527 NTN4 957621 sc-eQTL 2.68e-01 -0.105 0.0947 0.733 gdT L2
ENSG00000111144 LTA4H 705253 sc-eQTL 2.55e-01 -0.141 0.123 0.733 gdT L2
ENSG00000111145 ELK3 554398 sc-eQTL 1.43e-01 0.168 0.114 0.733 gdT L2
ENSG00000139343 SNRPF 889845 sc-eQTL 9.63e-01 0.00508 0.111 0.733 gdT L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 5.50e-01 0.0731 0.122 0.733 gdT L2
ENSG00000188596 CFAP54 259202 sc-eQTL 5.00e-01 0.0723 0.107 0.733 gdT L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.91e-01 -0.124 0.0947 0.736 intMono L2
ENSG00000084110 HAL 752408 sc-eQTL 7.71e-01 -0.0281 0.0961 0.736 intMono L2
ENSG00000111144 LTA4H 705253 sc-eQTL 6.39e-01 0.0463 0.0986 0.736 intMono L2
ENSG00000111145 ELK3 554398 sc-eQTL 4.54e-01 0.0658 0.0877 0.736 intMono L2
ENSG00000139343 SNRPF 889845 sc-eQTL 2.16e-03 -0.285 0.0917 0.736 intMono L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.22e-01 -0.151 0.097 0.736 intMono L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 5.11e-01 0.0646 0.098 0.736 intMono L2
ENSG00000059758 CDK17 348293 sc-eQTL 1.98e-01 0.0953 0.0739 0.729 ncMono L2
ENSG00000084110 HAL 752408 sc-eQTL 2.80e-01 -0.0894 0.0826 0.729 ncMono L2
ENSG00000111144 LTA4H 705253 sc-eQTL 5.78e-01 -0.0514 0.0922 0.729 ncMono L2
ENSG00000111145 ELK3 554398 sc-eQTL 7.98e-01 0.0203 0.0792 0.729 ncMono L2
ENSG00000139343 SNRPF 889845 sc-eQTL 3.99e-01 -0.0683 0.0808 0.729 ncMono L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 3.12e-01 -0.0869 0.0858 0.729 ncMono L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 4.27e-01 -0.0779 0.098 0.729 ncMono L2
ENSG00000059758 CDK17 348293 sc-eQTL 7.60e-02 -0.177 0.0992 0.734 pDC L2
ENSG00000084110 HAL 752408 sc-eQTL 8.35e-01 -0.0176 0.0846 0.734 pDC L2
ENSG00000111144 LTA4H 705253 sc-eQTL 6.32e-01 0.0454 0.0947 0.734 pDC L2
ENSG00000111145 ELK3 554398 sc-eQTL 2.06e-01 -0.146 0.115 0.734 pDC L2
ENSG00000139343 SNRPF 889845 sc-eQTL 5.30e-01 -0.0635 0.101 0.734 pDC L2
ENSG00000139350 NEDD1 -158450 sc-eQTL 9.74e-01 -0.00364 0.112 0.734 pDC L2
ENSG00000257715 AC007298.1 723450 sc-eQTL 8.47e-01 -0.0185 0.0957 0.734 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 348293 sc-eQTL 5.21e-02 -0.127 0.0651 0.735 B_Memory LOneK1K
ENSG00000111144 LTA4H 705253 sc-eQTL 3.36e-01 -0.0656 0.0681 0.735 B_Memory LOneK1K
ENSG00000111145 ELK3 554398 sc-eQTL 4.91e-01 0.0538 0.0779 0.735 B_Memory LOneK1K
ENSG00000139343 SNRPF 889845 sc-eQTL 8.01e-02 -0.132 0.0751 0.735 B_Memory LOneK1K
ENSG00000139350 NEDD1 -158450 sc-eQTL 5.18e-01 0.0642 0.0991 0.735 B_Memory LOneK1K
ENSG00000059758 CDK17 348293 sc-eQTL 8.67e-01 -0.00943 0.0565 0.735 B_Naive LOneK1K
ENSG00000111144 LTA4H 705253 sc-eQTL 4.90e-01 0.0438 0.0633 0.735 B_Naive LOneK1K
ENSG00000111145 ELK3 554398 sc-eQTL 1.26e-01 -0.11 0.0718 0.735 B_Naive LOneK1K
ENSG00000139343 SNRPF 889845 sc-eQTL 4.93e-01 0.0498 0.0726 0.735 B_Naive LOneK1K
ENSG00000139350 NEDD1 -158450 sc-eQTL 8.07e-01 -0.0236 0.0962 0.735 B_Naive LOneK1K
ENSG00000059758 CDK17 348293 sc-eQTL 5.71e-01 -0.0376 0.0663 0.735 CD14_Mono LOneK1K
ENSG00000084110 HAL 752408 sc-eQTL 4.90e-01 -0.0555 0.0802 0.735 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 705253 sc-eQTL 4.59e-01 0.0652 0.088 0.735 CD14_Mono LOneK1K
ENSG00000111145 ELK3 554398 sc-eQTL 7.89e-01 0.0171 0.0637 0.735 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 889845 sc-eQTL 8.68e-01 0.0102 0.0615 0.735 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.02e-02 -0.246 0.0949 0.735 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 723450 sc-eQTL 6.63e-02 0.164 0.0886 0.735 CD14_Mono LOneK1K
ENSG00000059758 CDK17 348293 sc-eQTL 9.02e-01 0.00843 0.0686 0.735 CD16_Mono LOneK1K
ENSG00000084110 HAL 752408 sc-eQTL 3.23e-01 -0.0801 0.0809 0.735 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 705253 sc-eQTL 9.11e-01 -0.0101 0.0899 0.735 CD16_Mono LOneK1K
ENSG00000111145 ELK3 554398 sc-eQTL 8.24e-01 -0.0148 0.0665 0.735 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 889845 sc-eQTL 3.09e-02 -0.147 0.0678 0.735 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -158450 sc-eQTL 1.28e-01 -0.134 0.0875 0.735 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 723450 sc-eQTL 7.32e-01 -0.0319 0.0931 0.735 CD16_Mono LOneK1K
ENSG00000059758 CDK17 348293 sc-eQTL 5.72e-01 0.0276 0.0487 0.737 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 705253 sc-eQTL 4.22e-01 -0.0681 0.0846 0.737 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 554398 sc-eQTL 6.09e-01 0.0397 0.0775 0.737 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 889845 sc-eQTL 5.73e-01 -0.0374 0.0663 0.737 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -158450 sc-eQTL 2.50e-01 -0.0952 0.0825 0.737 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -158450 eQTL 4.02e-14 -0.198 0.0258 0.0 0.0 0.263
ENSG00000188596 CFAP54 259198 eQTL 4.66e-06 -0.101 0.0219 0.0 0.0 0.263

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -158450 3.06e-06 2.6e-06 5.11e-07 2.05e-06 7.59e-07 7.3e-07 2.25e-06 8.73e-07 2.25e-06 1.23e-06 2.45e-06 1.66e-06 3.83e-06 1.35e-06 8.93e-07 1.95e-06 1.58e-06 2.19e-06 1.45e-06 1.28e-06 1.41e-06 3.15e-06 2.74e-06 1.6e-06 4.06e-06 1.21e-06 1.47e-06 1.81e-06 2.76e-06 2.2e-06 2e-06 4.17e-07 6.22e-07 1.36e-06 1.54e-06 9.73e-07 9.41e-07 4.09e-07 1.35e-06 3.63e-07 2.79e-07 3.49e-06 5.78e-07 1.89e-07 3.46e-07 4.03e-07 8.74e-07 2.33e-07 1.74e-07
ENSG00000188596 CFAP54 259198 1.24e-06 1.01e-06 2.13e-07 1.04e-06 3.48e-07 6.22e-07 1.6e-06 3.68e-07 1.41e-06 6.29e-07 1.81e-06 7.84e-07 2.31e-06 2.96e-07 5.34e-07 9.19e-07 9.2e-07 7.21e-07 8.36e-07 6.16e-07 7.54e-07 1.72e-06 8.92e-07 5.66e-07 2.29e-06 6.58e-07 9.29e-07 7.45e-07 1.47e-06 1.27e-06 6.68e-07 2.42e-07 2.55e-07 6.61e-07 5.2e-07 4.42e-07 6.66e-07 2.74e-07 5.03e-07 3.11e-07 2.8e-07 1.54e-06 1.39e-07 6.46e-08 2.98e-07 1.12e-07 2.43e-07 4.91e-08 1.68e-07