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Genes within 1Mb (chr12:96740424:A:G):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 339944 sc-eQTL 8.11e-02 0.076 0.0433 0.534 B L1
ENSG00000111144 LTA4H 696904 sc-eQTL 1.23e-01 0.0835 0.0539 0.534 B L1
ENSG00000111145 ELK3 546049 sc-eQTL 2.96e-01 0.0603 0.0576 0.534 B L1
ENSG00000139343 SNRPF 881496 sc-eQTL 2.79e-01 0.0568 0.0523 0.534 B L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 5.02e-01 -0.0514 0.0765 0.534 B L1
ENSG00000059758 CDK17 339944 sc-eQTL 7.55e-01 -0.0113 0.036 0.534 CD4T L1
ENSG00000111144 LTA4H 696904 sc-eQTL 8.04e-01 0.0123 0.0494 0.534 CD4T L1
ENSG00000111145 ELK3 546049 sc-eQTL 6.61e-01 -0.0235 0.0535 0.534 CD4T L1
ENSG00000139343 SNRPF 881496 sc-eQTL 5.35e-01 -0.0291 0.0468 0.534 CD4T L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.46e-01 -0.0836 0.0574 0.534 CD4T L1
ENSG00000059758 CDK17 339944 sc-eQTL 2.78e-01 -0.0401 0.0369 0.534 CD8T L1
ENSG00000111144 LTA4H 696904 sc-eQTL 7.03e-01 -0.0151 0.0397 0.534 CD8T L1
ENSG00000111145 ELK3 546049 sc-eQTL 1.80e-01 -0.08 0.0595 0.534 CD8T L1
ENSG00000139343 SNRPF 881496 sc-eQTL 7.28e-01 0.017 0.0489 0.534 CD8T L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 5.13e-01 -0.0426 0.065 0.534 CD8T L1
ENSG00000059758 CDK17 339944 sc-eQTL 4.12e-01 -0.0569 0.0692 0.532 DC L1
ENSG00000084110 HAL 744059 sc-eQTL 4.82e-01 -0.0555 0.0788 0.532 DC L1
ENSG00000111144 LTA4H 696904 sc-eQTL 4.09e-02 0.131 0.0639 0.532 DC L1
ENSG00000111145 ELK3 546049 sc-eQTL 9.92e-01 0.000797 0.079 0.532 DC L1
ENSG00000139343 SNRPF 881496 sc-eQTL 7.32e-01 0.0225 0.0657 0.532 DC L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.06e-01 -0.136 0.0838 0.532 DC L1
ENSG00000257715 AC007298.1 715101 sc-eQTL 1.32e-01 -0.115 0.0758 0.532 DC L1
ENSG00000059758 CDK17 339944 sc-eQTL 5.46e-01 -0.034 0.0561 0.534 Mono L1
ENSG00000084110 HAL 744059 sc-eQTL 8.73e-01 -0.0113 0.0708 0.534 Mono L1
ENSG00000111144 LTA4H 696904 sc-eQTL 1.07e-01 0.129 0.0794 0.534 Mono L1
ENSG00000111145 ELK3 546049 sc-eQTL 4.83e-01 -0.0376 0.0536 0.534 Mono L1
ENSG00000139343 SNRPF 881496 sc-eQTL 3.45e-01 -0.0478 0.0505 0.534 Mono L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.56e-02 -0.163 0.0769 0.534 Mono L1
ENSG00000257715 AC007298.1 715101 sc-eQTL 3.25e-02 0.16 0.0745 0.534 Mono L1
ENSG00000059758 CDK17 339944 sc-eQTL 2.52e-01 0.048 0.0418 0.536 NK L1
ENSG00000111144 LTA4H 696904 sc-eQTL 2.62e-01 -0.0797 0.0709 0.536 NK L1
ENSG00000111145 ELK3 546049 sc-eQTL 7.42e-01 0.0223 0.0674 0.536 NK L1
ENSG00000139343 SNRPF 881496 sc-eQTL 4.65e-01 0.0409 0.0559 0.536 NK L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.99e-01 0.0181 0.0708 0.536 NK L1
ENSG00000059758 CDK17 339944 sc-eQTL 3.68e-01 0.0313 0.0348 0.534 Other_T L1
ENSG00000074527 NTN4 949272 sc-eQTL 2.85e-01 -0.0688 0.0642 0.534 Other_T L1
ENSG00000111144 LTA4H 696904 sc-eQTL 9.92e-02 -0.12 0.0723 0.534 Other_T L1
ENSG00000111145 ELK3 546049 sc-eQTL 5.07e-01 -0.0377 0.0568 0.534 Other_T L1
ENSG00000139343 SNRPF 881496 sc-eQTL 8.47e-01 0.0102 0.0528 0.534 Other_T L1
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.00e-01 -0.103 0.0801 0.534 Other_T L1
ENSG00000188596 CFAP54 250853 sc-eQTL 5.65e-01 0.0479 0.0832 0.534 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 339944 sc-eQTL 8.96e-01 0.0107 0.0816 0.526 B_Activated L2
ENSG00000111144 LTA4H 696904 sc-eQTL 3.30e-01 0.09 0.0921 0.526 B_Activated L2
ENSG00000111145 ELK3 546049 sc-eQTL 5.52e-01 0.0582 0.0977 0.526 B_Activated L2
ENSG00000139343 SNRPF 881496 sc-eQTL 6.87e-01 0.0372 0.0921 0.526 B_Activated L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.12e-01 -0.0976 0.0962 0.526 B_Activated L2
ENSG00000059758 CDK17 339944 sc-eQTL 2.70e-01 0.0754 0.0682 0.534 B_Intermediate L2
ENSG00000111144 LTA4H 696904 sc-eQTL 2.22e-01 0.0809 0.066 0.534 B_Intermediate L2
ENSG00000111145 ELK3 546049 sc-eQTL 5.24e-01 -0.0476 0.0746 0.534 B_Intermediate L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.37e-01 0.0578 0.0743 0.534 B_Intermediate L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.75e-01 0.0774 0.087 0.534 B_Intermediate L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.00e-01 -0.0169 0.0665 0.537 B_Memory L2
ENSG00000111144 LTA4H 696904 sc-eQTL 9.40e-01 -0.00576 0.0768 0.537 B_Memory L2
ENSG00000111145 ELK3 546049 sc-eQTL 3.34e-01 0.0729 0.0753 0.537 B_Memory L2
ENSG00000139343 SNRPF 881496 sc-eQTL 3.46e-01 -0.0755 0.0798 0.537 B_Memory L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.41e-01 0.104 0.0882 0.537 B_Memory L2
ENSG00000059758 CDK17 339944 sc-eQTL 2.14e-01 0.0681 0.0547 0.534 B_Naive1 L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.81e-01 0.0405 0.0575 0.534 B_Naive1 L2
ENSG00000111145 ELK3 546049 sc-eQTL 3.06e-01 0.0697 0.0678 0.534 B_Naive1 L2
ENSG00000139343 SNRPF 881496 sc-eQTL 2.07e-01 0.0834 0.0659 0.534 B_Naive1 L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 5.86e-01 -0.0462 0.0848 0.534 B_Naive1 L2
ENSG00000059758 CDK17 339944 sc-eQTL 9.25e-02 0.117 0.0695 0.534 B_Naive2 L2
ENSG00000111144 LTA4H 696904 sc-eQTL 2.41e-01 0.0777 0.0661 0.534 B_Naive2 L2
ENSG00000111145 ELK3 546049 sc-eQTL 5.57e-01 0.0459 0.0781 0.534 B_Naive2 L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.18e-01 0.0629 0.0775 0.534 B_Naive2 L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.91e-01 -0.0792 0.0921 0.534 B_Naive2 L2
ENSG00000059758 CDK17 339944 sc-eQTL 7.94e-01 0.0169 0.0649 0.536 CD4_CTL L2
ENSG00000111144 LTA4H 696904 sc-eQTL 7.26e-01 -0.0322 0.0915 0.536 CD4_CTL L2
ENSG00000111145 ELK3 546049 sc-eQTL 7.85e-01 -0.0253 0.0926 0.536 CD4_CTL L2
ENSG00000139343 SNRPF 881496 sc-eQTL 3.90e-01 0.0693 0.0804 0.536 CD4_CTL L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.01e-01 -0.0962 0.0929 0.536 CD4_CTL L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.02e-01 0.00997 0.0397 0.534 CD4_Naive L2
ENSG00000111144 LTA4H 696904 sc-eQTL 8.78e-01 0.00879 0.0574 0.534 CD4_Naive L2
ENSG00000111145 ELK3 546049 sc-eQTL 4.75e-01 -0.041 0.0573 0.534 CD4_Naive L2
ENSG00000139343 SNRPF 881496 sc-eQTL 5.28e-01 -0.0322 0.0509 0.534 CD4_Naive L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.15e-01 -0.0987 0.0624 0.534 CD4_Naive L2
ENSG00000059758 CDK17 339944 sc-eQTL 5.19e-01 -0.0249 0.0385 0.534 CD4_TCM L2
ENSG00000111144 LTA4H 696904 sc-eQTL 8.64e-01 -0.0112 0.0654 0.534 CD4_TCM L2
ENSG00000111145 ELK3 546049 sc-eQTL 4.44e-01 -0.0492 0.0642 0.534 CD4_TCM L2
ENSG00000139343 SNRPF 881496 sc-eQTL 5.90e-01 -0.0285 0.0527 0.534 CD4_TCM L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 8.69e-01 -0.0119 0.0721 0.534 CD4_TCM L2
ENSG00000059758 CDK17 339944 sc-eQTL 1.70e-01 0.066 0.0479 0.534 CD4_TEM L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.16e-01 0.0605 0.0742 0.534 CD4_TEM L2
ENSG00000111145 ELK3 546049 sc-eQTL 1.38e-01 0.102 0.0687 0.534 CD4_TEM L2
ENSG00000139343 SNRPF 881496 sc-eQTL 1.84e-01 -0.096 0.072 0.534 CD4_TEM L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.05e-01 -0.139 0.0852 0.534 CD4_TEM L2
ENSG00000059758 CDK17 339944 sc-eQTL 9.50e-01 0.00291 0.0466 0.534 CD8_CTL L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.89e-01 -0.0583 0.0841 0.534 CD8_CTL L2
ENSG00000111145 ELK3 546049 sc-eQTL 5.85e-01 0.0419 0.0766 0.534 CD8_CTL L2
ENSG00000139343 SNRPF 881496 sc-eQTL 8.10e-01 -0.017 0.0704 0.534 CD8_CTL L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 8.09e-01 -0.0191 0.079 0.534 CD8_CTL L2
ENSG00000059758 CDK17 339944 sc-eQTL 1.19e-01 -0.086 0.055 0.534 CD8_Naive L2
ENSG00000111144 LTA4H 696904 sc-eQTL 9.06e-01 0.00785 0.0662 0.534 CD8_Naive L2
ENSG00000111145 ELK3 546049 sc-eQTL 6.36e-02 -0.13 0.0695 0.534 CD8_Naive L2
ENSG00000139343 SNRPF 881496 sc-eQTL 1.35e-01 0.094 0.0627 0.534 CD8_Naive L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.38e-01 -0.0884 0.0748 0.534 CD8_Naive L2
ENSG00000059758 CDK17 339944 sc-eQTL 7.38e-02 0.111 0.0615 0.53 CD8_TCM L2
ENSG00000111144 LTA4H 696904 sc-eQTL 1.36e-01 0.136 0.0906 0.53 CD8_TCM L2
ENSG00000111145 ELK3 546049 sc-eQTL 4.61e-01 -0.057 0.077 0.53 CD8_TCM L2
ENSG00000139343 SNRPF 881496 sc-eQTL 6.28e-01 0.043 0.0888 0.53 CD8_TCM L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 4.68e-01 -0.0632 0.0869 0.53 CD8_TCM L2
ENSG00000059758 CDK17 339944 sc-eQTL 5.44e-01 -0.0457 0.0752 0.532 CD8_TEM L2
ENSG00000111144 LTA4H 696904 sc-eQTL 9.11e-01 0.0103 0.0922 0.532 CD8_TEM L2
ENSG00000111145 ELK3 546049 sc-eQTL 9.25e-01 0.00859 0.0907 0.532 CD8_TEM L2
ENSG00000139343 SNRPF 881496 sc-eQTL 8.69e-01 0.0139 0.0843 0.532 CD8_TEM L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 4.51e-01 -0.069 0.0913 0.532 CD8_TEM L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.06e-01 0.0123 0.05 0.532 MAIT L2
ENSG00000074527 NTN4 949272 sc-eQTL 4.09e-01 -0.0557 0.0673 0.532 MAIT L2
ENSG00000111144 LTA4H 696904 sc-eQTL 2.86e-01 -0.0824 0.0771 0.532 MAIT L2
ENSG00000111145 ELK3 546049 sc-eQTL 5.78e-01 -0.0361 0.0648 0.532 MAIT L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.22e-01 -0.0604 0.0751 0.532 MAIT L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.56e-01 -0.0959 0.0842 0.532 MAIT L2
ENSG00000188596 CFAP54 250853 sc-eQTL 6.68e-01 -0.0359 0.0836 0.532 MAIT L2
ENSG00000059758 CDK17 339944 sc-eQTL 3.40e-03 0.155 0.0524 0.538 NK_CD56bright L2
ENSG00000111144 LTA4H 696904 sc-eQTL 6.31e-01 0.038 0.0791 0.538 NK_CD56bright L2
ENSG00000111145 ELK3 546049 sc-eQTL 7.08e-01 0.0315 0.084 0.538 NK_CD56bright L2
ENSG00000139343 SNRPF 881496 sc-eQTL 2.22e-02 0.2 0.0867 0.538 NK_CD56bright L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 8.39e-01 -0.0181 0.0887 0.538 NK_CD56bright L2
ENSG00000059758 CDK17 339944 sc-eQTL 9.41e-02 0.0751 0.0447 0.539 NK_CD56dim L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.73e-01 -0.0583 0.0811 0.539 NK_CD56dim L2
ENSG00000111145 ELK3 546049 sc-eQTL 9.20e-01 0.00723 0.0719 0.539 NK_CD56dim L2
ENSG00000139343 SNRPF 881496 sc-eQTL 2.69e-01 -0.0756 0.0682 0.539 NK_CD56dim L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 6.43e-01 -0.0365 0.0788 0.539 NK_CD56dim L2
ENSG00000059758 CDK17 339944 sc-eQTL 5.60e-01 -0.041 0.0702 0.541 NK_HLA L2
ENSG00000111144 LTA4H 696904 sc-eQTL 2.42e-01 -0.108 0.0918 0.541 NK_HLA L2
ENSG00000111145 ELK3 546049 sc-eQTL 2.79e-02 0.187 0.0845 0.541 NK_HLA L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.90e-02 0.175 0.0882 0.541 NK_HLA L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 5.93e-01 -0.0451 0.0842 0.541 NK_HLA L2
ENSG00000059758 CDK17 339944 sc-eQTL 7.68e-01 0.0145 0.0492 0.539 NK_cytokine L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.31e-01 -0.0655 0.0831 0.539 NK_cytokine L2
ENSG00000111145 ELK3 546049 sc-eQTL 4.64e-01 -0.0584 0.0796 0.539 NK_cytokine L2
ENSG00000139343 SNRPF 881496 sc-eQTL 1.29e-01 0.102 0.0671 0.539 NK_cytokine L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.68e-01 0.115 0.083 0.539 NK_cytokine L2
ENSG00000059758 CDK17 339944 sc-eQTL 1.75e-01 -0.136 0.0997 0.541 PB L2
ENSG00000111144 LTA4H 696904 sc-eQTL 5.99e-01 -0.0466 0.0886 0.541 PB L2
ENSG00000111145 ELK3 546049 sc-eQTL 2.39e-02 0.254 0.111 0.541 PB L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.27e-01 0.0881 0.111 0.541 PB L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.60e-01 0.0403 0.132 0.541 PB L2
ENSG00000059758 CDK17 339944 sc-eQTL 9.97e-01 -0.000198 0.0545 0.528 Pro_T L2
ENSG00000074527 NTN4 949272 sc-eQTL 2.51e-01 -0.0702 0.061 0.528 Pro_T L2
ENSG00000111144 LTA4H 696904 sc-eQTL 8.42e-01 -0.0143 0.072 0.528 Pro_T L2
ENSG00000111145 ELK3 546049 sc-eQTL 2.85e-01 -0.093 0.0868 0.528 Pro_T L2
ENSG00000139343 SNRPF 881496 sc-eQTL 6.33e-01 0.0263 0.0549 0.528 Pro_T L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.36e-01 0.0269 0.0797 0.528 Pro_T L2
ENSG00000188596 CFAP54 250853 sc-eQTL 4.44e-01 0.0494 0.0644 0.528 Pro_T L2
ENSG00000059758 CDK17 339944 sc-eQTL 2.46e-01 -0.0695 0.0598 0.534 Treg L2
ENSG00000111144 LTA4H 696904 sc-eQTL 5.23e-01 -0.0486 0.076 0.534 Treg L2
ENSG00000111145 ELK3 546049 sc-eQTL 3.66e-01 -0.0623 0.0688 0.534 Treg L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.28e-01 0.0633 0.0797 0.534 Treg L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 6.93e-01 0.0352 0.089 0.534 Treg L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.39e-01 -0.0155 0.076 0.532 cDC L2
ENSG00000084110 HAL 744059 sc-eQTL 5.39e-01 -0.0486 0.079 0.532 cDC L2
ENSG00000111144 LTA4H 696904 sc-eQTL 2.57e-03 0.202 0.0661 0.532 cDC L2
ENSG00000111145 ELK3 546049 sc-eQTL 9.25e-01 0.00843 0.0894 0.532 cDC L2
ENSG00000139343 SNRPF 881496 sc-eQTL 7.07e-01 0.0282 0.0748 0.532 cDC L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.90e-01 -0.0964 0.0909 0.532 cDC L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 6.80e-01 -0.0318 0.0769 0.532 cDC L2
ENSG00000059758 CDK17 339944 sc-eQTL 1.36e-01 -0.0964 0.0644 0.534 cMono_IL1B L2
ENSG00000084110 HAL 744059 sc-eQTL 7.24e-01 0.025 0.0706 0.534 cMono_IL1B L2
ENSG00000111144 LTA4H 696904 sc-eQTL 6.08e-02 0.143 0.0757 0.534 cMono_IL1B L2
ENSG00000111145 ELK3 546049 sc-eQTL 1.10e-01 -0.0938 0.0584 0.534 cMono_IL1B L2
ENSG00000139343 SNRPF 881496 sc-eQTL 6.59e-01 -0.0268 0.0606 0.534 cMono_IL1B L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 4.12e-03 -0.238 0.0819 0.534 cMono_IL1B L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 3.75e-02 0.162 0.0772 0.534 cMono_IL1B L2
ENSG00000059758 CDK17 339944 sc-eQTL 7.22e-01 -0.0262 0.0736 0.534 cMono_S100A L2
ENSG00000084110 HAL 744059 sc-eQTL 8.16e-01 0.0192 0.0826 0.534 cMono_S100A L2
ENSG00000111144 LTA4H 696904 sc-eQTL 1.84e-01 0.11 0.0822 0.534 cMono_S100A L2
ENSG00000111145 ELK3 546049 sc-eQTL 8.71e-01 0.011 0.0672 0.534 cMono_S100A L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.00e-01 0.056 0.0663 0.534 cMono_S100A L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 4.19e-01 -0.0725 0.0895 0.534 cMono_S100A L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 1.40e-02 0.206 0.0832 0.534 cMono_S100A L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.29e-01 0.0158 0.0732 0.53 gdT L2
ENSG00000074527 NTN4 949272 sc-eQTL 6.52e-01 0.0379 0.0839 0.53 gdT L2
ENSG00000111144 LTA4H 696904 sc-eQTL 1.61e-01 -0.153 0.109 0.53 gdT L2
ENSG00000111145 ELK3 546049 sc-eQTL 6.94e-01 0.04 0.101 0.53 gdT L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.45e-02 0.195 0.0964 0.53 gdT L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.41e-01 -0.0358 0.108 0.53 gdT L2
ENSG00000188596 CFAP54 250853 sc-eQTL 6.69e-01 0.0405 0.0946 0.53 gdT L2
ENSG00000059758 CDK17 339944 sc-eQTL 1.88e-01 -0.109 0.0822 0.531 intMono L2
ENSG00000084110 HAL 744059 sc-eQTL 8.74e-01 0.0132 0.0835 0.531 intMono L2
ENSG00000111144 LTA4H 696904 sc-eQTL 9.91e-02 0.141 0.0851 0.531 intMono L2
ENSG00000111145 ELK3 546049 sc-eQTL 7.71e-01 -0.0222 0.0763 0.531 intMono L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.02e-01 -0.0683 0.0814 0.531 intMono L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 1.31e-01 -0.128 0.0843 0.531 intMono L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 6.79e-02 0.155 0.0845 0.531 intMono L2
ENSG00000059758 CDK17 339944 sc-eQTL 8.95e-01 0.00868 0.066 0.52 ncMono L2
ENSG00000084110 HAL 744059 sc-eQTL 8.29e-01 0.0159 0.0736 0.52 ncMono L2
ENSG00000111144 LTA4H 696904 sc-eQTL 8.31e-01 0.0176 0.0821 0.52 ncMono L2
ENSG00000111145 ELK3 546049 sc-eQTL 9.89e-01 0.00102 0.0705 0.52 ncMono L2
ENSG00000139343 SNRPF 881496 sc-eQTL 2.77e-02 -0.158 0.0711 0.52 ncMono L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.16e-01 0.0279 0.0764 0.52 ncMono L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 6.44e-01 0.0404 0.0872 0.52 ncMono L2
ENSG00000059758 CDK17 339944 sc-eQTL 3.37e-01 -0.0827 0.0859 0.523 pDC L2
ENSG00000084110 HAL 744059 sc-eQTL 7.31e-01 -0.0251 0.0727 0.523 pDC L2
ENSG00000111144 LTA4H 696904 sc-eQTL 4.10e-02 0.166 0.0803 0.523 pDC L2
ENSG00000111145 ELK3 546049 sc-eQTL 9.50e-01 0.00627 0.0996 0.523 pDC L2
ENSG00000139343 SNRPF 881496 sc-eQTL 4.79e-01 0.0616 0.0868 0.523 pDC L2
ENSG00000139350 NEDD1 -166799 sc-eQTL 4.40e-01 -0.0741 0.0957 0.523 pDC L2
ENSG00000257715 AC007298.1 715101 sc-eQTL 6.55e-01 0.0368 0.0822 0.523 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 339944 sc-eQTL 4.96e-01 0.0389 0.0571 0.534 B_Memory LOneK1K
ENSG00000111144 LTA4H 696904 sc-eQTL 2.01e-01 0.0758 0.0591 0.534 B_Memory LOneK1K
ENSG00000111145 ELK3 546049 sc-eQTL 9.02e-01 0.0084 0.0678 0.534 B_Memory LOneK1K
ENSG00000139343 SNRPF 881496 sc-eQTL 9.31e-01 0.00567 0.0657 0.534 B_Memory LOneK1K
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.69e-01 0.0774 0.086 0.534 B_Memory LOneK1K
ENSG00000059758 CDK17 339944 sc-eQTL 5.73e-02 0.0936 0.049 0.534 B_Naive LOneK1K
ENSG00000111144 LTA4H 696904 sc-eQTL 1.62e-01 0.0774 0.0552 0.534 B_Naive LOneK1K
ENSG00000111145 ELK3 546049 sc-eQTL 4.87e-01 0.0439 0.063 0.534 B_Naive LOneK1K
ENSG00000139343 SNRPF 881496 sc-eQTL 3.26e-01 0.0624 0.0634 0.534 B_Naive LOneK1K
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.61e-01 -0.0768 0.0839 0.534 B_Naive LOneK1K
ENSG00000059758 CDK17 339944 sc-eQTL 1.35e-01 -0.0875 0.0583 0.534 CD14_Mono LOneK1K
ENSG00000084110 HAL 744059 sc-eQTL 9.07e-01 -0.00826 0.0709 0.534 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 696904 sc-eQTL 6.31e-02 0.144 0.0772 0.534 CD14_Mono LOneK1K
ENSG00000111145 ELK3 546049 sc-eQTL 4.08e-01 -0.0465 0.0562 0.534 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 881496 sc-eQTL 8.97e-01 -0.00701 0.0543 0.534 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -166799 sc-eQTL 2.13e-02 -0.195 0.0841 0.534 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 715101 sc-eQTL 1.12e-02 0.199 0.0777 0.534 CD14_Mono LOneK1K
ENSG00000059758 CDK17 339944 sc-eQTL 3.89e-01 -0.0522 0.0605 0.537 CD16_Mono LOneK1K
ENSG00000084110 HAL 744059 sc-eQTL 7.60e-01 0.0219 0.0716 0.537 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 696904 sc-eQTL 2.44e-01 0.0925 0.0791 0.537 CD16_Mono LOneK1K
ENSG00000111145 ELK3 546049 sc-eQTL 5.66e-01 -0.0337 0.0587 0.537 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 881496 sc-eQTL 3.98e-02 -0.124 0.06 0.537 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -166799 sc-eQTL 3.87e-01 -0.0673 0.0775 0.537 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 715101 sc-eQTL 6.74e-01 0.0346 0.0822 0.537 CD16_Mono LOneK1K
ENSG00000059758 CDK17 339944 sc-eQTL 3.37e-01 0.0406 0.0422 0.539 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 696904 sc-eQTL 8.80e-02 -0.125 0.073 0.539 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 546049 sc-eQTL 6.84e-01 0.0274 0.0672 0.539 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 881496 sc-eQTL 7.71e-01 0.0168 0.0575 0.539 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -166799 sc-eQTL 7.69e-01 0.0211 0.0718 0.539 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -166799 eQTL 0.00241 -0.0703 0.0231 0.0 0.0 0.456
ENSG00000188596 CFAP54 250849 eQTL 0.00156 -0.0611 0.0193 0.0 0.0 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -166799 3.06e-06 2.6e-06 5.62e-07 1.98e-06 8.47e-07 7.26e-07 2.25e-06 1.03e-06 2.43e-06 1.24e-06 2.77e-06 1.68e-06 3.99e-06 1.4e-06 8.88e-07 2e-06 1.56e-06 2.12e-06 1.52e-06 1.18e-06 1.64e-06 3.37e-06 2.87e-06 1.82e-06 3.97e-06 1.14e-06 1.61e-06 1.84e-06 3.22e-06 2.45e-06 2.02e-06 4.9e-07 7.09e-07 1.83e-06 1.54e-06 8.84e-07 9.38e-07 4.65e-07 1.31e-06 4.18e-07 5.18e-07 3.56e-06 5.78e-07 1.8e-07 3.75e-07 3.49e-07 8.3e-07 2.38e-07 3.24e-07
ENSG00000188596 CFAP54 250849 1.37e-06 1.25e-06 2.2e-07 1.3e-06 4.48e-07 6.17e-07 1.5e-06 3.95e-07 1.69e-06 6.69e-07 2.04e-06 9.21e-07 2.56e-06 2.82e-07 4.61e-07 1.03e-06 9.71e-07 1.1e-06 5.83e-07 5.06e-07 7.33e-07 1.98e-06 1.14e-06 6.51e-07 2.47e-06 9.37e-07 1.02e-06 8.14e-07 1.71e-06 1.31e-06 8.18e-07 2.54e-07 3.25e-07 6.21e-07 5.34e-07 6.24e-07 7.05e-07 3.63e-07 5.07e-07 2.26e-07 2.89e-07 1.77e-06 2.46e-07 1.41e-07 3.57e-07 2.3e-07 2.87e-07 1.42e-07 2.83e-07