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Genes within 1Mb (chr12:96715364:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 314884 sc-eQTL 5.36e-01 0.0583 0.094 0.936 B L1
ENSG00000111144 LTA4H 671844 sc-eQTL 6.22e-01 0.0576 0.117 0.936 B L1
ENSG00000111145 ELK3 520989 sc-eQTL 1.78e-01 0.168 0.124 0.936 B L1
ENSG00000139343 SNRPF 856436 sc-eQTL 1.96e-01 0.146 0.113 0.936 B L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 3.33e-01 0.16 0.165 0.936 B L1
ENSG00000059758 CDK17 314884 sc-eQTL 7.17e-01 -0.0285 0.0784 0.936 CD4T L1
ENSG00000111144 LTA4H 671844 sc-eQTL 6.14e-01 -0.0544 0.108 0.936 CD4T L1
ENSG00000111145 ELK3 520989 sc-eQTL 6.11e-01 -0.0594 0.117 0.936 CD4T L1
ENSG00000139343 SNRPF 856436 sc-eQTL 4.51e-01 0.0769 0.102 0.936 CD4T L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.67e-01 0.00526 0.126 0.936 CD4T L1
ENSG00000059758 CDK17 314884 sc-eQTL 7.74e-03 -0.21 0.0781 0.936 CD8T L1
ENSG00000111144 LTA4H 671844 sc-eQTL 6.42e-01 0.0397 0.0853 0.936 CD8T L1
ENSG00000111145 ELK3 520989 sc-eQTL 9.44e-01 -0.0091 0.128 0.936 CD8T L1
ENSG00000139343 SNRPF 856436 sc-eQTL 6.61e-01 -0.0462 0.105 0.936 CD8T L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.10e-01 -0.0159 0.14 0.936 CD8T L1
ENSG00000059758 CDK17 314884 sc-eQTL 2.92e-01 -0.158 0.15 0.937 DC L1
ENSG00000084110 HAL 718999 sc-eQTL 2.18e-01 -0.21 0.17 0.937 DC L1
ENSG00000111144 LTA4H 671844 sc-eQTL 2.31e-01 0.167 0.139 0.937 DC L1
ENSG00000111145 ELK3 520989 sc-eQTL 6.28e-01 0.083 0.171 0.937 DC L1
ENSG00000139343 SNRPF 856436 sc-eQTL 5.59e-01 -0.0832 0.142 0.937 DC L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 7.98e-01 0.0469 0.182 0.937 DC L1
ENSG00000257715 AC007298.1 690041 sc-eQTL 9.49e-02 -0.275 0.164 0.937 DC L1
ENSG00000059758 CDK17 314884 sc-eQTL 2.29e-01 0.145 0.12 0.936 Mono L1
ENSG00000084110 HAL 718999 sc-eQTL 7.86e-01 0.0412 0.152 0.936 Mono L1
ENSG00000111144 LTA4H 671844 sc-eQTL 8.22e-01 0.0385 0.171 0.936 Mono L1
ENSG00000111145 ELK3 520989 sc-eQTL 4.95e-01 0.0785 0.115 0.936 Mono L1
ENSG00000139343 SNRPF 856436 sc-eQTL 7.81e-01 -0.0302 0.108 0.936 Mono L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.44e-01 0.0116 0.166 0.936 Mono L1
ENSG00000257715 AC007298.1 690041 sc-eQTL 7.96e-01 0.0417 0.161 0.936 Mono L1
ENSG00000059758 CDK17 314884 sc-eQTL 8.24e-01 -0.02 0.0898 0.936 NK L1
ENSG00000111144 LTA4H 671844 sc-eQTL 7.71e-01 -0.0444 0.152 0.936 NK L1
ENSG00000111145 ELK3 520989 sc-eQTL 2.09e-01 0.182 0.144 0.936 NK L1
ENSG00000139343 SNRPF 856436 sc-eQTL 9.29e-01 0.0107 0.12 0.936 NK L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.54e-01 -0.0899 0.152 0.936 NK L1
ENSG00000059758 CDK17 314884 sc-eQTL 5.36e-02 0.146 0.0753 0.936 Other_T L1
ENSG00000074527 NTN4 924212 sc-eQTL 2.51e-01 -0.161 0.14 0.936 Other_T L1
ENSG00000111144 LTA4H 671844 sc-eQTL 7.96e-03 -0.419 0.156 0.936 Other_T L1
ENSG00000111145 ELK3 520989 sc-eQTL 6.60e-01 -0.0546 0.124 0.936 Other_T L1
ENSG00000139343 SNRPF 856436 sc-eQTL 7.57e-01 0.0358 0.115 0.936 Other_T L1
ENSG00000139350 NEDD1 -191859 sc-eQTL 7.16e-01 -0.064 0.175 0.936 Other_T L1
ENSG00000188596 CFAP54 225793 sc-eQTL 2.49e-01 -0.209 0.181 0.936 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 314884 sc-eQTL 1.88e-01 0.219 0.166 0.931 B_Activated L2
ENSG00000111144 LTA4H 671844 sc-eQTL 5.26e-01 -0.12 0.188 0.931 B_Activated L2
ENSG00000111145 ELK3 520989 sc-eQTL 9.74e-01 -0.00652 0.2 0.931 B_Activated L2
ENSG00000139343 SNRPF 856436 sc-eQTL 4.90e-01 -0.13 0.188 0.931 B_Activated L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 6.34e-01 0.0939 0.197 0.931 B_Activated L2
ENSG00000059758 CDK17 314884 sc-eQTL 7.86e-01 -0.04 0.147 0.936 B_Intermediate L2
ENSG00000111144 LTA4H 671844 sc-eQTL 1.75e-01 -0.193 0.142 0.936 B_Intermediate L2
ENSG00000111145 ELK3 520989 sc-eQTL 8.85e-01 -0.0233 0.161 0.936 B_Intermediate L2
ENSG00000139343 SNRPF 856436 sc-eQTL 7.81e-01 0.0445 0.16 0.936 B_Intermediate L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.75e-01 0.105 0.187 0.936 B_Intermediate L2
ENSG00000059758 CDK17 314884 sc-eQTL 4.36e-01 -0.112 0.143 0.935 B_Memory L2
ENSG00000111144 LTA4H 671844 sc-eQTL 3.47e-01 0.156 0.165 0.935 B_Memory L2
ENSG00000111145 ELK3 520989 sc-eQTL 6.11e-02 0.304 0.161 0.935 B_Memory L2
ENSG00000139343 SNRPF 856436 sc-eQTL 3.29e-01 -0.168 0.172 0.935 B_Memory L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.37e-01 -0.118 0.19 0.935 B_Memory L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.99e-01 -0.0451 0.117 0.936 B_Naive1 L2
ENSG00000111144 LTA4H 671844 sc-eQTL 9.01e-01 -0.0152 0.122 0.936 B_Naive1 L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.50e-01 0.135 0.144 0.936 B_Naive1 L2
ENSG00000139343 SNRPF 856436 sc-eQTL 3.67e-01 0.127 0.14 0.936 B_Naive1 L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 4.58e-01 0.134 0.18 0.936 B_Naive1 L2
ENSG00000059758 CDK17 314884 sc-eQTL 7.77e-02 0.261 0.147 0.936 B_Naive2 L2
ENSG00000111144 LTA4H 671844 sc-eQTL 3.49e-01 0.132 0.14 0.936 B_Naive2 L2
ENSG00000111145 ELK3 520989 sc-eQTL 6.90e-01 0.0661 0.166 0.936 B_Naive2 L2
ENSG00000139343 SNRPF 856436 sc-eQTL 4.34e-01 0.129 0.164 0.936 B_Naive2 L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.09e-01 0.245 0.195 0.936 B_Naive2 L2
ENSG00000059758 CDK17 314884 sc-eQTL 4.91e-01 0.0953 0.138 0.934 CD4_CTL L2
ENSG00000111144 LTA4H 671844 sc-eQTL 6.38e-02 -0.36 0.193 0.934 CD4_CTL L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.95e-01 0.168 0.197 0.934 CD4_CTL L2
ENSG00000139343 SNRPF 856436 sc-eQTL 7.03e-01 0.0654 0.171 0.934 CD4_CTL L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.21e-01 0.243 0.198 0.934 CD4_CTL L2
ENSG00000059758 CDK17 314884 sc-eQTL 9.43e-01 -0.00612 0.086 0.936 CD4_Naive L2
ENSG00000111144 LTA4H 671844 sc-eQTL 4.82e-01 -0.0875 0.124 0.936 CD4_Naive L2
ENSG00000111145 ELK3 520989 sc-eQTL 6.25e-01 -0.0608 0.124 0.936 CD4_Naive L2
ENSG00000139343 SNRPF 856436 sc-eQTL 5.93e-01 0.0591 0.11 0.936 CD4_Naive L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 8.11e-01 -0.0325 0.136 0.936 CD4_Naive L2
ENSG00000059758 CDK17 314884 sc-eQTL 3.30e-01 -0.0815 0.0835 0.936 CD4_TCM L2
ENSG00000111144 LTA4H 671844 sc-eQTL 9.35e-01 -0.0117 0.142 0.936 CD4_TCM L2
ENSG00000111145 ELK3 520989 sc-eQTL 2.69e-01 -0.154 0.139 0.936 CD4_TCM L2
ENSG00000139343 SNRPF 856436 sc-eQTL 7.44e-02 0.204 0.114 0.936 CD4_TCM L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.37e-01 -0.185 0.156 0.936 CD4_TCM L2
ENSG00000059758 CDK17 314884 sc-eQTL 7.74e-01 -0.0295 0.102 0.936 CD4_TEM L2
ENSG00000111144 LTA4H 671844 sc-eQTL 5.76e-01 0.0884 0.158 0.936 CD4_TEM L2
ENSG00000111145 ELK3 520989 sc-eQTL 6.13e-01 0.0744 0.147 0.936 CD4_TEM L2
ENSG00000139343 SNRPF 856436 sc-eQTL 4.19e-02 -0.312 0.152 0.936 CD4_TEM L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.02e-01 -0.0226 0.182 0.936 CD4_TEM L2
ENSG00000059758 CDK17 314884 sc-eQTL 3.53e-01 -0.0917 0.0984 0.936 CD8_CTL L2
ENSG00000111144 LTA4H 671844 sc-eQTL 5.66e-01 0.102 0.178 0.936 CD8_CTL L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.64e-01 0.147 0.162 0.936 CD8_CTL L2
ENSG00000139343 SNRPF 856436 sc-eQTL 2.90e-02 -0.324 0.147 0.936 CD8_CTL L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 1.98e-01 0.215 0.167 0.936 CD8_CTL L2
ENSG00000059758 CDK17 314884 sc-eQTL 1.31e-01 -0.181 0.119 0.936 CD8_Naive L2
ENSG00000111144 LTA4H 671844 sc-eQTL 1.93e-01 0.187 0.143 0.936 CD8_Naive L2
ENSG00000111145 ELK3 520989 sc-eQTL 6.04e-01 -0.079 0.152 0.936 CD8_Naive L2
ENSG00000139343 SNRPF 856436 sc-eQTL 6.30e-01 0.0659 0.137 0.936 CD8_Naive L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.72e-01 -0.092 0.163 0.936 CD8_Naive L2
ENSG00000059758 CDK17 314884 sc-eQTL 7.40e-01 -0.0438 0.132 0.935 CD8_TCM L2
ENSG00000111144 LTA4H 671844 sc-eQTL 1.81e-01 0.259 0.193 0.935 CD8_TCM L2
ENSG00000111145 ELK3 520989 sc-eQTL 5.81e-01 0.0906 0.164 0.935 CD8_TCM L2
ENSG00000139343 SNRPF 856436 sc-eQTL 4.54e-01 -0.141 0.189 0.935 CD8_TCM L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.39e-01 -0.217 0.184 0.935 CD8_TCM L2
ENSG00000059758 CDK17 314884 sc-eQTL 4.36e-01 -0.126 0.162 0.938 CD8_TEM L2
ENSG00000111144 LTA4H 671844 sc-eQTL 7.62e-01 -0.0602 0.198 0.938 CD8_TEM L2
ENSG00000111145 ELK3 520989 sc-eQTL 5.02e-01 -0.131 0.195 0.938 CD8_TEM L2
ENSG00000139343 SNRPF 856436 sc-eQTL 9.73e-01 -0.00621 0.181 0.938 CD8_TEM L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.45e-01 -0.0136 0.197 0.938 CD8_TEM L2
ENSG00000059758 CDK17 314884 sc-eQTL 1.75e-01 0.147 0.108 0.935 MAIT L2
ENSG00000074527 NTN4 924212 sc-eQTL 2.77e-01 -0.159 0.146 0.935 MAIT L2
ENSG00000111144 LTA4H 671844 sc-eQTL 4.27e-02 -0.338 0.166 0.935 MAIT L2
ENSG00000111145 ELK3 520989 sc-eQTL 8.53e-01 -0.026 0.141 0.935 MAIT L2
ENSG00000139343 SNRPF 856436 sc-eQTL 3.96e-01 -0.138 0.163 0.935 MAIT L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 1.32e-01 -0.275 0.182 0.935 MAIT L2
ENSG00000188596 CFAP54 225793 sc-eQTL 1.28e-01 -0.276 0.18 0.935 MAIT L2
ENSG00000059758 CDK17 314884 sc-eQTL 7.74e-01 0.0323 0.112 0.936 NK_CD56bright L2
ENSG00000111144 LTA4H 671844 sc-eQTL 4.57e-01 -0.124 0.166 0.936 NK_CD56bright L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.56e-01 0.163 0.176 0.936 NK_CD56bright L2
ENSG00000139343 SNRPF 856436 sc-eQTL 2.83e-01 -0.198 0.184 0.936 NK_CD56bright L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.58e-01 -0.109 0.186 0.936 NK_CD56bright L2
ENSG00000059758 CDK17 314884 sc-eQTL 2.83e-01 0.104 0.097 0.935 NK_CD56dim L2
ENSG00000111144 LTA4H 671844 sc-eQTL 8.14e-01 -0.0415 0.176 0.935 NK_CD56dim L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.76e-01 0.138 0.155 0.935 NK_CD56dim L2
ENSG00000139343 SNRPF 856436 sc-eQTL 3.81e-01 -0.13 0.148 0.935 NK_CD56dim L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 7.79e-01 0.048 0.171 0.935 NK_CD56dim L2
ENSG00000059758 CDK17 314884 sc-eQTL 1.26e-01 -0.239 0.155 0.938 NK_HLA L2
ENSG00000111144 LTA4H 671844 sc-eQTL 4.74e-02 -0.405 0.203 0.938 NK_HLA L2
ENSG00000111145 ELK3 520989 sc-eQTL 4.93e-01 0.13 0.19 0.938 NK_HLA L2
ENSG00000139343 SNRPF 856436 sc-eQTL 1.12e-02 0.499 0.195 0.938 NK_HLA L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 8.55e-01 0.0344 0.188 0.938 NK_HLA L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.88e-01 0.0424 0.106 0.935 NK_cytokine L2
ENSG00000111144 LTA4H 671844 sc-eQTL 7.66e-01 -0.0532 0.179 0.935 NK_cytokine L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.89e-01 0.148 0.171 0.935 NK_cytokine L2
ENSG00000139343 SNRPF 856436 sc-eQTL 6.21e-01 0.0717 0.145 0.935 NK_cytokine L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.69e-01 -0.198 0.179 0.935 NK_cytokine L2
ENSG00000059758 CDK17 314884 sc-eQTL 1.05e-01 0.312 0.191 0.93 PB L2
ENSG00000111144 LTA4H 671844 sc-eQTL 1.80e-02 -0.398 0.166 0.93 PB L2
ENSG00000111145 ELK3 520989 sc-eQTL 8.82e-01 0.0325 0.218 0.93 PB L2
ENSG00000139343 SNRPF 856436 sc-eQTL 1.11e-01 -0.337 0.21 0.93 PB L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 3.18e-01 0.252 0.252 0.93 PB L2
ENSG00000059758 CDK17 314884 sc-eQTL 8.96e-03 0.306 0.116 0.935 Pro_T L2
ENSG00000074527 NTN4 924212 sc-eQTL 7.11e-01 -0.049 0.132 0.935 Pro_T L2
ENSG00000111144 LTA4H 671844 sc-eQTL 5.77e-02 -0.294 0.154 0.935 Pro_T L2
ENSG00000111145 ELK3 520989 sc-eQTL 5.95e-01 -0.1 0.188 0.935 Pro_T L2
ENSG00000139343 SNRPF 856436 sc-eQTL 6.53e-01 -0.0534 0.119 0.935 Pro_T L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 3.72e-01 0.154 0.172 0.935 Pro_T L2
ENSG00000188596 CFAP54 225793 sc-eQTL 2.27e-01 0.168 0.139 0.935 Pro_T L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.32e-01 -0.0624 0.13 0.936 Treg L2
ENSG00000111144 LTA4H 671844 sc-eQTL 8.74e-01 0.0261 0.165 0.936 Treg L2
ENSG00000111145 ELK3 520989 sc-eQTL 3.74e-01 -0.133 0.149 0.936 Treg L2
ENSG00000139343 SNRPF 856436 sc-eQTL 6.24e-01 0.0847 0.173 0.936 Treg L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 8.69e-02 0.329 0.191 0.936 Treg L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.31e-01 -0.0774 0.161 0.937 cDC L2
ENSG00000084110 HAL 718999 sc-eQTL 4.11e-01 -0.138 0.167 0.937 cDC L2
ENSG00000111144 LTA4H 671844 sc-eQTL 8.88e-02 0.244 0.142 0.937 cDC L2
ENSG00000111145 ELK3 520989 sc-eQTL 4.77e-01 -0.135 0.189 0.937 cDC L2
ENSG00000139343 SNRPF 856436 sc-eQTL 6.78e-01 0.0661 0.159 0.937 cDC L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.21e-01 0.0191 0.193 0.937 cDC L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 3.18e-01 -0.163 0.163 0.937 cDC L2
ENSG00000059758 CDK17 314884 sc-eQTL 1.38e-01 0.206 0.138 0.936 cMono_IL1B L2
ENSG00000084110 HAL 718999 sc-eQTL 4.73e-02 0.3 0.15 0.936 cMono_IL1B L2
ENSG00000111144 LTA4H 671844 sc-eQTL 9.39e-01 0.0125 0.164 0.936 cMono_IL1B L2
ENSG00000111145 ELK3 520989 sc-eQTL 4.98e-01 0.0857 0.126 0.936 cMono_IL1B L2
ENSG00000139343 SNRPF 856436 sc-eQTL 9.34e-01 0.0108 0.13 0.936 cMono_IL1B L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 7.67e-01 0.0533 0.179 0.936 cMono_IL1B L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 6.73e-01 0.0708 0.167 0.936 cMono_IL1B L2
ENSG00000059758 CDK17 314884 sc-eQTL 3.39e-01 0.15 0.157 0.936 cMono_S100A L2
ENSG00000084110 HAL 718999 sc-eQTL 3.22e-01 -0.174 0.176 0.936 cMono_S100A L2
ENSG00000111144 LTA4H 671844 sc-eQTL 3.88e-01 0.152 0.176 0.936 cMono_S100A L2
ENSG00000111145 ELK3 520989 sc-eQTL 8.74e-01 0.0227 0.143 0.936 cMono_S100A L2
ENSG00000139343 SNRPF 856436 sc-eQTL 1.24e-01 0.217 0.141 0.936 cMono_S100A L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 4.03e-01 -0.16 0.191 0.936 cMono_S100A L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 4.03e-01 0.151 0.18 0.936 cMono_S100A L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.18e-01 0.0749 0.15 0.933 gdT L2
ENSG00000074527 NTN4 924212 sc-eQTL 4.38e-01 -0.134 0.172 0.933 gdT L2
ENSG00000111144 LTA4H 671844 sc-eQTL 8.78e-03 -0.583 0.219 0.933 gdT L2
ENSG00000111145 ELK3 520989 sc-eQTL 1.18e-01 0.324 0.206 0.933 gdT L2
ENSG00000139343 SNRPF 856436 sc-eQTL 5.89e-01 0.109 0.2 0.933 gdT L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 8.61e-01 0.0388 0.221 0.933 gdT L2
ENSG00000188596 CFAP54 225793 sc-eQTL 9.46e-01 0.0132 0.194 0.933 gdT L2
ENSG00000059758 CDK17 314884 sc-eQTL 9.93e-02 -0.296 0.179 0.936 intMono L2
ENSG00000084110 HAL 718999 sc-eQTL 2.88e-02 -0.395 0.18 0.936 intMono L2
ENSG00000111144 LTA4H 671844 sc-eQTL 7.73e-01 -0.0537 0.186 0.936 intMono L2
ENSG00000111145 ELK3 520989 sc-eQTL 4.58e-01 0.123 0.166 0.936 intMono L2
ENSG00000139343 SNRPF 856436 sc-eQTL 1.94e-01 -0.23 0.177 0.936 intMono L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.79e-01 -0.00497 0.184 0.936 intMono L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 5.75e-01 0.104 0.185 0.936 intMono L2
ENSG00000059758 CDK17 314884 sc-eQTL 6.51e-01 0.0631 0.139 0.932 ncMono L2
ENSG00000084110 HAL 718999 sc-eQTL 9.59e-01 0.00808 0.155 0.932 ncMono L2
ENSG00000111144 LTA4H 671844 sc-eQTL 7.47e-01 -0.0561 0.173 0.932 ncMono L2
ENSG00000111145 ELK3 520989 sc-eQTL 7.27e-01 0.052 0.149 0.932 ncMono L2
ENSG00000139343 SNRPF 856436 sc-eQTL 4.06e-03 -0.433 0.149 0.932 ncMono L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 6.99e-01 -0.0624 0.161 0.932 ncMono L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 5.93e-01 -0.0984 0.184 0.932 ncMono L2
ENSG00000059758 CDK17 314884 sc-eQTL 5.33e-01 -0.109 0.174 0.929 pDC L2
ENSG00000084110 HAL 718999 sc-eQTL 8.25e-01 -0.0325 0.147 0.929 pDC L2
ENSG00000111144 LTA4H 671844 sc-eQTL 8.84e-01 -0.0239 0.164 0.929 pDC L2
ENSG00000111145 ELK3 520989 sc-eQTL 9.09e-01 0.0231 0.201 0.929 pDC L2
ENSG00000139343 SNRPF 856436 sc-eQTL 5.52e-01 -0.105 0.175 0.929 pDC L2
ENSG00000139350 NEDD1 -191859 sc-eQTL 1.59e-01 0.272 0.192 0.929 pDC L2
ENSG00000257715 AC007298.1 690041 sc-eQTL 1.46e-01 -0.241 0.165 0.929 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 314884 sc-eQTL 8.06e-01 -0.0303 0.123 0.936 B_Memory LOneK1K
ENSG00000111144 LTA4H 671844 sc-eQTL 7.42e-01 -0.0421 0.128 0.936 B_Memory LOneK1K
ENSG00000111145 ELK3 520989 sc-eQTL 3.01e-01 0.151 0.146 0.936 B_Memory LOneK1K
ENSG00000139343 SNRPF 856436 sc-eQTL 9.78e-01 -0.00387 0.141 0.936 B_Memory LOneK1K
ENSG00000139350 NEDD1 -191859 sc-eQTL 8.94e-01 0.0247 0.186 0.936 B_Memory LOneK1K
ENSG00000059758 CDK17 314884 sc-eQTL 6.40e-01 0.0489 0.104 0.936 B_Naive LOneK1K
ENSG00000111144 LTA4H 671844 sc-eQTL 8.70e-01 0.0191 0.117 0.936 B_Naive LOneK1K
ENSG00000111145 ELK3 520989 sc-eQTL 5.14e-01 0.087 0.133 0.936 B_Naive LOneK1K
ENSG00000139343 SNRPF 856436 sc-eQTL 3.77e-01 0.119 0.134 0.936 B_Naive LOneK1K
ENSG00000139350 NEDD1 -191859 sc-eQTL 2.41e-01 0.208 0.177 0.936 B_Naive LOneK1K
ENSG00000059758 CDK17 314884 sc-eQTL 1.14e-01 0.198 0.125 0.936 CD14_Mono LOneK1K
ENSG00000084110 HAL 718999 sc-eQTL 5.58e-01 0.0891 0.152 0.936 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 671844 sc-eQTL 6.31e-01 0.0803 0.167 0.936 CD14_Mono LOneK1K
ENSG00000111145 ELK3 520989 sc-eQTL 7.36e-01 0.0407 0.121 0.936 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 856436 sc-eQTL 5.11e-01 0.0766 0.116 0.936 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -191859 sc-eQTL 7.73e-01 -0.0528 0.183 0.936 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 690041 sc-eQTL 4.61e-01 0.125 0.169 0.936 CD14_Mono LOneK1K
ENSG00000059758 CDK17 314884 sc-eQTL 5.93e-01 -0.0688 0.128 0.935 CD16_Mono LOneK1K
ENSG00000084110 HAL 718999 sc-eQTL 6.03e-01 -0.079 0.152 0.935 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 671844 sc-eQTL 9.16e-01 -0.0179 0.169 0.935 CD16_Mono LOneK1K
ENSG00000111145 ELK3 520989 sc-eQTL 8.45e-01 0.0245 0.125 0.935 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 856436 sc-eQTL 3.21e-02 -0.274 0.127 0.935 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -191859 sc-eQTL 9.40e-01 0.0125 0.165 0.935 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 690041 sc-eQTL 8.96e-01 -0.0228 0.175 0.935 CD16_Mono LOneK1K
ENSG00000059758 CDK17 314884 sc-eQTL 5.73e-01 0.0516 0.0913 0.935 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 671844 sc-eQTL 6.64e-01 -0.069 0.159 0.935 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 520989 sc-eQTL 1.48e-01 0.21 0.145 0.935 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 856436 sc-eQTL 4.58e-01 0.0925 0.124 0.935 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -191859 sc-eQTL 5.96e-01 -0.0824 0.155 0.935 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139343 SNRPF 856436 eQTL 0.0188 -0.0402 0.0171 0.00148 0.0 0.0653
ENSG00000139350 NEDD1 -191859 eQTL 0.00542 0.127 0.0457 0.0 0.0 0.0653

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139344 \N 772033 2.91e-07 1.36e-07 5.93e-08 2.01e-07 9.87e-08 8.45e-08 1.73e-07 5.85e-08 1.5e-07 6.75e-08 1.67e-07 1.11e-07 1.79e-07 7.64e-08 5.72e-08 7.89e-08 4.31e-08 1.56e-07 6.92e-08 4.92e-08 1.25e-07 1.31e-07 1.58e-07 2.83e-08 1.68e-07 1.26e-07 1.12e-07 1.01e-07 1.26e-07 1.03e-07 1.07e-07 2.99e-08 3.73e-08 8.89e-08 3.63e-08 2.95e-08 5.65e-08 8.72e-08 6.58e-08 3.75e-08 5.34e-08 1.46e-07 5.22e-08 1.49e-08 3.81e-08 1.92e-08 1e-07 1.88e-09 4.8e-08