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Genes within 1Mb (chr12:96703967:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 303487 sc-eQTL 1.26e-01 0.0655 0.0427 0.547 B L1
ENSG00000111144 LTA4H 660447 sc-eQTL 1.46e-01 0.0774 0.0531 0.547 B L1
ENSG00000111145 ELK3 509592 sc-eQTL 2.95e-01 0.0595 0.0566 0.547 B L1
ENSG00000139343 SNRPF 845039 sc-eQTL 2.12e-01 0.0643 0.0514 0.547 B L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 3.45e-01 -0.0712 0.0751 0.547 B L1
ENSG00000059758 CDK17 303487 sc-eQTL 9.72e-01 -0.00126 0.0354 0.547 CD4T L1
ENSG00000111144 LTA4H 660447 sc-eQTL 7.82e-01 0.0135 0.0487 0.547 CD4T L1
ENSG00000111145 ELK3 509592 sc-eQTL 6.17e-01 -0.0264 0.0527 0.547 CD4T L1
ENSG00000139343 SNRPF 845039 sc-eQTL 5.56e-01 -0.0272 0.046 0.547 CD4T L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.99e-01 -0.0729 0.0565 0.547 CD4T L1
ENSG00000059758 CDK17 303487 sc-eQTL 7.97e-01 -0.00937 0.0364 0.547 CD8T L1
ENSG00000111144 LTA4H 660447 sc-eQTL 7.59e-01 -0.012 0.0391 0.547 CD8T L1
ENSG00000111145 ELK3 509592 sc-eQTL 2.75e-01 -0.0643 0.0587 0.547 CD8T L1
ENSG00000139343 SNRPF 845039 sc-eQTL 7.94e-01 0.0126 0.0483 0.547 CD8T L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 3.90e-01 -0.0552 0.064 0.547 CD8T L1
ENSG00000059758 CDK17 303487 sc-eQTL 4.99e-01 -0.0464 0.0686 0.545 DC L1
ENSG00000084110 HAL 707602 sc-eQTL 2.64e-01 -0.0872 0.0779 0.545 DC L1
ENSG00000111144 LTA4H 660447 sc-eQTL 3.06e-02 0.138 0.0632 0.545 DC L1
ENSG00000111145 ELK3 509592 sc-eQTL 8.87e-01 -0.0111 0.0783 0.545 DC L1
ENSG00000139343 SNRPF 845039 sc-eQTL 6.27e-01 0.0316 0.0651 0.545 DC L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.17e-01 -0.131 0.0831 0.545 DC L1
ENSG00000257715 AC007298.1 678644 sc-eQTL 2.34e-01 -0.0898 0.0752 0.545 DC L1
ENSG00000059758 CDK17 303487 sc-eQTL 6.52e-01 -0.0249 0.0552 0.547 Mono L1
ENSG00000084110 HAL 707602 sc-eQTL 8.51e-01 -0.0131 0.0695 0.547 Mono L1
ENSG00000111144 LTA4H 660447 sc-eQTL 1.61e-01 0.11 0.0781 0.547 Mono L1
ENSG00000111145 ELK3 509592 sc-eQTL 6.64e-01 -0.0229 0.0527 0.547 Mono L1
ENSG00000139343 SNRPF 845039 sc-eQTL 2.33e-01 -0.0592 0.0495 0.547 Mono L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.26e-02 -0.137 0.0757 0.547 Mono L1
ENSG00000257715 AC007298.1 678644 sc-eQTL 1.01e-01 0.121 0.0735 0.547 Mono L1
ENSG00000059758 CDK17 303487 sc-eQTL 1.25e-01 0.0633 0.0411 0.549 NK L1
ENSG00000111144 LTA4H 660447 sc-eQTL 2.30e-01 -0.0842 0.0699 0.549 NK L1
ENSG00000111145 ELK3 509592 sc-eQTL 8.48e-01 0.0127 0.0665 0.549 NK L1
ENSG00000139343 SNRPF 845039 sc-eQTL 6.80e-01 0.0228 0.0552 0.549 NK L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.76e-01 0.0199 0.0698 0.549 NK L1
ENSG00000059758 CDK17 303487 sc-eQTL 5.04e-01 0.0229 0.0343 0.547 Other_T L1
ENSG00000074527 NTN4 912815 sc-eQTL 3.26e-01 -0.0623 0.0633 0.547 Other_T L1
ENSG00000111144 LTA4H 660447 sc-eQTL 2.07e-01 -0.0905 0.0715 0.547 Other_T L1
ENSG00000111145 ELK3 509592 sc-eQTL 5.31e-01 -0.0351 0.0559 0.547 Other_T L1
ENSG00000139343 SNRPF 845039 sc-eQTL 8.55e-01 -0.00951 0.052 0.547 Other_T L1
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.34e-01 -0.0942 0.079 0.547 Other_T L1
ENSG00000188596 CFAP54 214396 sc-eQTL 6.37e-01 0.0387 0.082 0.547 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 303487 sc-eQTL 7.88e-01 -0.0216 0.08 0.541 B_Activated L2
ENSG00000111144 LTA4H 660447 sc-eQTL 4.95e-01 0.0619 0.0905 0.541 B_Activated L2
ENSG00000111145 ELK3 509592 sc-eQTL 5.79e-01 0.0532 0.0959 0.541 B_Activated L2
ENSG00000139343 SNRPF 845039 sc-eQTL 6.83e-01 0.0369 0.0904 0.541 B_Activated L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.64e-01 -0.131 0.0941 0.541 B_Activated L2
ENSG00000059758 CDK17 303487 sc-eQTL 1.99e-01 0.0863 0.0671 0.547 B_Intermediate L2
ENSG00000111144 LTA4H 660447 sc-eQTL 2.29e-01 0.0784 0.065 0.547 B_Intermediate L2
ENSG00000111145 ELK3 509592 sc-eQTL 5.30e-01 -0.0462 0.0734 0.547 B_Intermediate L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.62e-01 0.0539 0.0731 0.547 B_Intermediate L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 5.32e-01 0.0536 0.0857 0.547 B_Intermediate L2
ENSG00000059758 CDK17 303487 sc-eQTL 7.23e-01 -0.0232 0.0656 0.55 B_Memory L2
ENSG00000111144 LTA4H 660447 sc-eQTL 8.33e-01 -0.016 0.0757 0.55 B_Memory L2
ENSG00000111145 ELK3 509592 sc-eQTL 3.16e-01 0.0746 0.0742 0.55 B_Memory L2
ENSG00000139343 SNRPF 845039 sc-eQTL 5.09e-01 -0.0522 0.0788 0.55 B_Memory L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.74e-01 0.118 0.0869 0.55 B_Memory L2
ENSG00000059758 CDK17 303487 sc-eQTL 3.51e-01 0.0504 0.0539 0.547 B_Naive1 L2
ENSG00000111144 LTA4H 660447 sc-eQTL 4.64e-01 0.0415 0.0565 0.547 B_Naive1 L2
ENSG00000111145 ELK3 509592 sc-eQTL 2.47e-01 0.0773 0.0666 0.547 B_Naive1 L2
ENSG00000139343 SNRPF 845039 sc-eQTL 2.13e-01 0.0809 0.0648 0.547 B_Naive1 L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 3.68e-01 -0.0752 0.0833 0.547 B_Naive1 L2
ENSG00000059758 CDK17 303487 sc-eQTL 1.77e-01 0.0931 0.0688 0.547 B_Naive2 L2
ENSG00000111144 LTA4H 660447 sc-eQTL 3.25e-01 0.0644 0.0653 0.547 B_Naive2 L2
ENSG00000111145 ELK3 509592 sc-eQTL 7.64e-01 0.0232 0.0772 0.547 B_Naive2 L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.18e-01 0.0621 0.0765 0.547 B_Naive2 L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.92e-01 -0.0627 0.091 0.547 B_Naive2 L2
ENSG00000059758 CDK17 303487 sc-eQTL 9.65e-01 -0.00278 0.0641 0.552 CD4_CTL L2
ENSG00000111144 LTA4H 660447 sc-eQTL 7.07e-01 -0.034 0.0904 0.552 CD4_CTL L2
ENSG00000111145 ELK3 509592 sc-eQTL 4.76e-01 -0.0652 0.0914 0.552 CD4_CTL L2
ENSG00000139343 SNRPF 845039 sc-eQTL 3.47e-01 0.0748 0.0794 0.552 CD4_CTL L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.50e-01 -0.106 0.0917 0.552 CD4_CTL L2
ENSG00000059758 CDK17 303487 sc-eQTL 6.53e-01 0.0176 0.039 0.547 CD4_Naive L2
ENSG00000111144 LTA4H 660447 sc-eQTL 8.62e-01 0.0098 0.0564 0.547 CD4_Naive L2
ENSG00000111145 ELK3 509592 sc-eQTL 6.38e-01 -0.0266 0.0564 0.547 CD4_Naive L2
ENSG00000139343 SNRPF 845039 sc-eQTL 5.34e-01 -0.0312 0.0501 0.547 CD4_Naive L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.44e-01 -0.0902 0.0614 0.547 CD4_Naive L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.93e-01 -0.00513 0.038 0.547 CD4_TCM L2
ENSG00000111144 LTA4H 660447 sc-eQTL 8.87e-01 -0.00913 0.0644 0.547 CD4_TCM L2
ENSG00000111145 ELK3 509592 sc-eQTL 4.44e-01 -0.0485 0.0633 0.547 CD4_TCM L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.41e-01 -0.04 0.0519 0.547 CD4_TCM L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 8.76e-01 0.011 0.071 0.547 CD4_TCM L2
ENSG00000059758 CDK17 303487 sc-eQTL 1.39e-01 0.0698 0.047 0.547 CD4_TEM L2
ENSG00000111144 LTA4H 660447 sc-eQTL 3.65e-01 0.0661 0.0728 0.547 CD4_TEM L2
ENSG00000111145 ELK3 509592 sc-eQTL 1.44e-01 0.0989 0.0674 0.547 CD4_TEM L2
ENSG00000139343 SNRPF 845039 sc-eQTL 2.14e-01 -0.0882 0.0707 0.547 CD4_TEM L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.57e-01 -0.119 0.0838 0.547 CD4_TEM L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.47e-01 0.00886 0.0458 0.547 CD8_CTL L2
ENSG00000111144 LTA4H 660447 sc-eQTL 5.92e-01 -0.0444 0.0827 0.547 CD8_CTL L2
ENSG00000111145 ELK3 509592 sc-eQTL 5.71e-01 0.0427 0.0753 0.547 CD8_CTL L2
ENSG00000139343 SNRPF 845039 sc-eQTL 9.50e-01 -0.00438 0.0692 0.547 CD8_CTL L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.89e-01 -0.0538 0.0775 0.547 CD8_CTL L2
ENSG00000059758 CDK17 303487 sc-eQTL 5.21e-01 -0.035 0.0544 0.547 CD8_Naive L2
ENSG00000111144 LTA4H 660447 sc-eQTL 7.84e-01 0.0179 0.0652 0.547 CD8_Naive L2
ENSG00000111145 ELK3 509592 sc-eQTL 7.24e-02 -0.124 0.0685 0.547 CD8_Naive L2
ENSG00000139343 SNRPF 845039 sc-eQTL 9.63e-02 0.103 0.0617 0.547 CD8_Naive L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.08e-01 -0.0611 0.0738 0.547 CD8_Naive L2
ENSG00000059758 CDK17 303487 sc-eQTL 3.42e-02 0.129 0.0603 0.544 CD8_TCM L2
ENSG00000111144 LTA4H 660447 sc-eQTL 1.95e-01 0.116 0.0893 0.544 CD8_TCM L2
ENSG00000111145 ELK3 509592 sc-eQTL 5.41e-01 -0.0465 0.0759 0.544 CD8_TCM L2
ENSG00000139343 SNRPF 845039 sc-eQTL 5.84e-01 0.0479 0.0874 0.544 CD8_TCM L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.23e-01 -0.0687 0.0855 0.544 CD8_TCM L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.74e-01 -0.012 0.0754 0.543 CD8_TEM L2
ENSG00000111144 LTA4H 660447 sc-eQTL 9.49e-01 -0.00591 0.0923 0.543 CD8_TEM L2
ENSG00000111145 ELK3 509592 sc-eQTL 8.05e-01 0.0224 0.0908 0.543 CD8_TEM L2
ENSG00000139343 SNRPF 845039 sc-eQTL 8.46e-01 -0.0164 0.0844 0.543 CD8_TEM L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 5.59e-01 -0.0536 0.0915 0.543 CD8_TEM L2
ENSG00000059758 CDK17 303487 sc-eQTL 9.17e-01 0.00521 0.0496 0.548 MAIT L2
ENSG00000074527 NTN4 912815 sc-eQTL 4.75e-01 -0.0478 0.0668 0.548 MAIT L2
ENSG00000111144 LTA4H 660447 sc-eQTL 3.51e-01 -0.0714 0.0765 0.548 MAIT L2
ENSG00000111145 ELK3 509592 sc-eQTL 5.54e-01 -0.0381 0.0643 0.548 MAIT L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.04e-01 -0.0622 0.0744 0.548 MAIT L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.98e-01 -0.087 0.0835 0.548 MAIT L2
ENSG00000188596 CFAP54 214396 sc-eQTL 7.01e-01 -0.0318 0.0829 0.548 MAIT L2
ENSG00000059758 CDK17 303487 sc-eQTL 1.88e-03 0.162 0.0515 0.551 NK_CD56bright L2
ENSG00000111144 LTA4H 660447 sc-eQTL 4.92e-01 0.0537 0.0779 0.551 NK_CD56bright L2
ENSG00000111145 ELK3 509592 sc-eQTL 6.04e-01 0.0429 0.0827 0.551 NK_CD56bright L2
ENSG00000139343 SNRPF 845039 sc-eQTL 2.61e-02 0.192 0.0855 0.551 NK_CD56bright L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.33e-01 -0.0298 0.0874 0.551 NK_CD56bright L2
ENSG00000059758 CDK17 303487 sc-eQTL 5.77e-02 0.0839 0.044 0.552 NK_CD56dim L2
ENSG00000111144 LTA4H 660447 sc-eQTL 5.61e-01 -0.0466 0.08 0.552 NK_CD56dim L2
ENSG00000111145 ELK3 509592 sc-eQTL 9.98e-01 -0.00021 0.0709 0.552 NK_CD56dim L2
ENSG00000139343 SNRPF 845039 sc-eQTL 1.88e-01 -0.0888 0.0672 0.552 NK_CD56dim L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.40e-01 -0.0258 0.0777 0.552 NK_CD56dim L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.76e-01 0.0108 0.0693 0.555 NK_HLA L2
ENSG00000111144 LTA4H 660447 sc-eQTL 4.05e-01 -0.0757 0.0907 0.555 NK_HLA L2
ENSG00000111145 ELK3 509592 sc-eQTL 9.26e-02 0.141 0.0837 0.555 NK_HLA L2
ENSG00000139343 SNRPF 845039 sc-eQTL 1.33e-01 0.132 0.0874 0.555 NK_HLA L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 5.36e-01 -0.0515 0.083 0.555 NK_HLA L2
ENSG00000059758 CDK17 303487 sc-eQTL 4.56e-01 0.0361 0.0484 0.552 NK_cytokine L2
ENSG00000111144 LTA4H 660447 sc-eQTL 2.31e-01 -0.098 0.0816 0.552 NK_cytokine L2
ENSG00000111145 ELK3 509592 sc-eQTL 3.93e-01 -0.067 0.0783 0.552 NK_cytokine L2
ENSG00000139343 SNRPF 845039 sc-eQTL 1.81e-01 0.0887 0.0662 0.552 NK_cytokine L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 1.39e-01 0.121 0.0817 0.552 NK_cytokine L2
ENSG00000059758 CDK17 303487 sc-eQTL 1.71e-01 -0.134 0.0973 0.552 PB L2
ENSG00000111144 LTA4H 660447 sc-eQTL 6.54e-01 -0.0389 0.0865 0.552 PB L2
ENSG00000111145 ELK3 509592 sc-eQTL 2.23e-02 0.251 0.108 0.552 PB L2
ENSG00000139343 SNRPF 845039 sc-eQTL 2.56e-01 0.123 0.108 0.552 PB L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.39e-01 -0.043 0.129 0.552 PB L2
ENSG00000059758 CDK17 303487 sc-eQTL 6.98e-01 -0.0209 0.0536 0.541 Pro_T L2
ENSG00000074527 NTN4 912815 sc-eQTL 3.33e-01 -0.0584 0.0601 0.541 Pro_T L2
ENSG00000111144 LTA4H 660447 sc-eQTL 8.18e-01 -0.0164 0.0708 0.541 Pro_T L2
ENSG00000111145 ELK3 509592 sc-eQTL 3.15e-01 -0.0861 0.0855 0.541 Pro_T L2
ENSG00000139343 SNRPF 845039 sc-eQTL 9.60e-01 -0.00273 0.054 0.541 Pro_T L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 9.67e-01 0.00328 0.0785 0.541 Pro_T L2
ENSG00000188596 CFAP54 214396 sc-eQTL 6.48e-01 0.029 0.0634 0.541 Pro_T L2
ENSG00000059758 CDK17 303487 sc-eQTL 2.19e-01 -0.0727 0.059 0.547 Treg L2
ENSG00000111144 LTA4H 660447 sc-eQTL 5.51e-01 -0.0448 0.0749 0.547 Treg L2
ENSG00000111145 ELK3 509592 sc-eQTL 2.99e-01 -0.0706 0.0678 0.547 Treg L2
ENSG00000139343 SNRPF 845039 sc-eQTL 3.69e-01 0.0707 0.0785 0.547 Treg L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 6.28e-01 0.0425 0.0877 0.547 Treg L2
ENSG00000059758 CDK17 303487 sc-eQTL 9.95e-01 0.00051 0.0745 0.546 cDC L2
ENSG00000084110 HAL 707602 sc-eQTL 3.13e-01 -0.0781 0.0772 0.546 cDC L2
ENSG00000111144 LTA4H 660447 sc-eQTL 2.65e-03 0.197 0.0647 0.546 cDC L2
ENSG00000111145 ELK3 509592 sc-eQTL 9.42e-01 -0.00642 0.0876 0.546 cDC L2
ENSG00000139343 SNRPF 845039 sc-eQTL 6.73e-01 0.0309 0.0733 0.546 cDC L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.70e-01 -0.0984 0.089 0.546 cDC L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 6.62e-01 -0.0329 0.0753 0.546 cDC L2
ENSG00000059758 CDK17 303487 sc-eQTL 2.12e-01 -0.0794 0.0634 0.547 cMono_IL1B L2
ENSG00000084110 HAL 707602 sc-eQTL 9.48e-01 -0.00457 0.0694 0.547 cMono_IL1B L2
ENSG00000111144 LTA4H 660447 sc-eQTL 8.69e-02 0.128 0.0745 0.547 cMono_IL1B L2
ENSG00000111145 ELK3 509592 sc-eQTL 1.90e-01 -0.0757 0.0575 0.547 cMono_IL1B L2
ENSG00000139343 SNRPF 845039 sc-eQTL 3.45e-01 -0.0563 0.0595 0.547 cMono_IL1B L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 9.88e-03 -0.21 0.0808 0.547 cMono_IL1B L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 9.71e-02 0.127 0.0761 0.547 cMono_IL1B L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.28e-01 -0.0157 0.0721 0.547 cMono_S100A L2
ENSG00000084110 HAL 707602 sc-eQTL 6.41e-01 0.0378 0.0809 0.547 cMono_S100A L2
ENSG00000111144 LTA4H 660447 sc-eQTL 3.31e-01 0.0786 0.0807 0.547 cMono_S100A L2
ENSG00000111145 ELK3 509592 sc-eQTL 7.87e-01 0.0179 0.0659 0.547 cMono_S100A L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.60e-01 0.0482 0.065 0.547 cMono_S100A L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.89e-01 -0.0608 0.0878 0.547 cMono_S100A L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 6.61e-02 0.152 0.0821 0.547 cMono_S100A L2
ENSG00000059758 CDK17 303487 sc-eQTL 8.51e-01 0.0136 0.0721 0.548 gdT L2
ENSG00000074527 NTN4 912815 sc-eQTL 5.88e-01 0.0449 0.0826 0.548 gdT L2
ENSG00000111144 LTA4H 660447 sc-eQTL 2.57e-01 -0.122 0.107 0.548 gdT L2
ENSG00000111145 ELK3 509592 sc-eQTL 6.40e-01 0.0467 0.0997 0.548 gdT L2
ENSG00000139343 SNRPF 845039 sc-eQTL 9.65e-02 0.16 0.0954 0.548 gdT L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 6.79e-01 -0.044 0.106 0.548 gdT L2
ENSG00000188596 CFAP54 214396 sc-eQTL 8.52e-01 0.0175 0.0932 0.548 gdT L2
ENSG00000059758 CDK17 303487 sc-eQTL 2.65e-01 -0.09 0.0806 0.542 intMono L2
ENSG00000084110 HAL 707602 sc-eQTL 3.97e-01 0.0694 0.0816 0.542 intMono L2
ENSG00000111144 LTA4H 660447 sc-eQTL 1.20e-01 0.13 0.0834 0.542 intMono L2
ENSG00000111145 ELK3 509592 sc-eQTL 7.99e-01 -0.019 0.0747 0.542 intMono L2
ENSG00000139343 SNRPF 845039 sc-eQTL 2.66e-01 -0.0888 0.0796 0.542 intMono L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.23e-01 -0.101 0.0827 0.542 intMono L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 1.01e-01 0.136 0.0829 0.542 intMono L2
ENSG00000059758 CDK17 303487 sc-eQTL 9.52e-01 -0.00397 0.0652 0.534 ncMono L2
ENSG00000084110 HAL 707602 sc-eQTL 7.40e-01 0.0242 0.0728 0.534 ncMono L2
ENSG00000111144 LTA4H 660447 sc-eQTL 9.91e-01 0.000921 0.0812 0.534 ncMono L2
ENSG00000111145 ELK3 509592 sc-eQTL 9.76e-01 -0.00214 0.0697 0.534 ncMono L2
ENSG00000139343 SNRPF 845039 sc-eQTL 4.08e-02 -0.145 0.0705 0.534 ncMono L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 7.00e-01 0.0292 0.0756 0.534 ncMono L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 7.62e-01 0.0262 0.0863 0.534 ncMono L2
ENSG00000059758 CDK17 303487 sc-eQTL 3.78e-01 -0.0746 0.0845 0.542 pDC L2
ENSG00000084110 HAL 707602 sc-eQTL 5.42e-01 -0.0436 0.0714 0.542 pDC L2
ENSG00000111144 LTA4H 660447 sc-eQTL 4.25e-02 0.162 0.079 0.542 pDC L2
ENSG00000111145 ELK3 509592 sc-eQTL 9.93e-01 0.000914 0.0979 0.542 pDC L2
ENSG00000139343 SNRPF 845039 sc-eQTL 5.03e-01 0.0573 0.0853 0.542 pDC L2
ENSG00000139350 NEDD1 -203256 sc-eQTL 5.38e-01 -0.0581 0.0941 0.542 pDC L2
ENSG00000257715 AC007298.1 678644 sc-eQTL 4.51e-01 0.061 0.0807 0.542 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 303487 sc-eQTL 4.50e-01 0.0424 0.0561 0.547 B_Memory LOneK1K
ENSG00000111144 LTA4H 660447 sc-eQTL 2.31e-01 0.0699 0.0581 0.547 B_Memory LOneK1K
ENSG00000111145 ELK3 509592 sc-eQTL 8.34e-01 0.014 0.0666 0.547 B_Memory LOneK1K
ENSG00000139343 SNRPF 845039 sc-eQTL 8.40e-01 0.013 0.0646 0.547 B_Memory LOneK1K
ENSG00000139350 NEDD1 -203256 sc-eQTL 5.06e-01 0.0564 0.0846 0.547 B_Memory LOneK1K
ENSG00000059758 CDK17 303487 sc-eQTL 1.08e-01 0.0777 0.0482 0.547 B_Naive LOneK1K
ENSG00000111144 LTA4H 660447 sc-eQTL 2.07e-01 0.0687 0.0543 0.547 B_Naive LOneK1K
ENSG00000111145 ELK3 509592 sc-eQTL 5.12e-01 0.0407 0.0619 0.547 B_Naive LOneK1K
ENSG00000139343 SNRPF 845039 sc-eQTL 2.93e-01 0.0657 0.0623 0.547 B_Naive LOneK1K
ENSG00000139350 NEDD1 -203256 sc-eQTL 2.50e-01 -0.0951 0.0824 0.547 B_Naive LOneK1K
ENSG00000059758 CDK17 303487 sc-eQTL 2.16e-01 -0.071 0.0572 0.547 CD14_Mono LOneK1K
ENSG00000084110 HAL 707602 sc-eQTL 7.72e-01 -0.0202 0.0695 0.547 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 660447 sc-eQTL 1.19e-01 0.119 0.0759 0.547 CD14_Mono LOneK1K
ENSG00000111145 ELK3 509592 sc-eQTL 6.63e-01 -0.024 0.0551 0.547 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 845039 sc-eQTL 7.02e-01 -0.0204 0.0532 0.547 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.85e-02 -0.164 0.0827 0.547 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 678644 sc-eQTL 5.97e-02 0.145 0.0766 0.547 CD14_Mono LOneK1K
ENSG00000059758 CDK17 303487 sc-eQTL 4.94e-01 -0.0408 0.0595 0.55 CD16_Mono LOneK1K
ENSG00000084110 HAL 707602 sc-eQTL 5.67e-01 0.0404 0.0703 0.55 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 660447 sc-eQTL 3.51e-01 0.0728 0.0779 0.55 CD16_Mono LOneK1K
ENSG00000111145 ELK3 509592 sc-eQTL 5.70e-01 -0.0328 0.0577 0.55 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 845039 sc-eQTL 2.23e-02 -0.135 0.0588 0.55 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -203256 sc-eQTL 4.37e-01 -0.0594 0.0763 0.55 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 678644 sc-eQTL 9.54e-01 0.00464 0.0808 0.55 CD16_Mono LOneK1K
ENSG00000059758 CDK17 303487 sc-eQTL 1.99e-01 0.0535 0.0415 0.552 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 660447 sc-eQTL 7.77e-02 -0.128 0.0719 0.552 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 509592 sc-eQTL 8.40e-01 0.0134 0.0663 0.552 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 845039 sc-eQTL 9.36e-01 -0.00459 0.0567 0.552 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -203256 sc-eQTL 6.80e-01 0.0292 0.0707 0.552 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -203256 eQTL 0.0048 -0.0661 0.0234 0.0 0.0 0.442
ENSG00000188596 CFAP54 214392 eQTL 0.0008 -0.0655 0.0195 0.0 0.0 0.442

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139344 \N 760636 2.76e-07 1.35e-07 5.64e-08 1.97e-07 1.02e-07 8.45e-08 1.67e-07 5.75e-08 1.5e-07 6.4e-08 1.63e-07 1.11e-07 1.59e-07 7.64e-08 5.82e-08 7.74e-08 4.24e-08 1.51e-07 6.92e-08 5.07e-08 1.27e-07 1.25e-07 1.5e-07 3.17e-08 1.65e-07 1.23e-07 1.12e-07 1.04e-07 1.24e-07 9.49e-08 1.06e-07 3.78e-08 3.68e-08 8.7e-08 3.4e-08 3.22e-08 5.74e-08 8.51e-08 6.71e-08 4.08e-08 5.94e-08 1.46e-07 5.24e-08 7.35e-09 3.07e-08 1.55e-08 1e-07 1.98e-09 4.82e-08
ENSG00000139350 NEDD1 -203256 1.6e-06 2.19e-06 2.77e-07 1.43e-06 4.63e-07 6.91e-07 1.31e-06 5.6e-07 1.72e-06 7.42e-07 1.9e-06 1.46e-06 2.84e-06 8.7e-07 5.38e-07 1.22e-06 1.04e-06 1.36e-06 6.7e-07 1.05e-06 8.63e-07 1.92e-06 1.68e-06 9.78e-07 2.55e-06 1.22e-06 1.17e-06 1.44e-06 1.71e-06 1.68e-06 7.39e-07 3.02e-07 4.32e-07 9.6e-07 9.21e-07 7.27e-07 7.56e-07 4.62e-07 6.98e-07 3.52e-07 1.52e-07 2.45e-06 4.23e-07 1.99e-07 3.39e-07 2.95e-07 4.95e-07 2.23e-07 2.32e-07
ENSG00000188596 CFAP54 214392 1.35e-06 1.92e-06 2.93e-07 1.33e-06 4.94e-07 6.4e-07 1.26e-06 4.42e-07 1.77e-06 6.94e-07 1.84e-06 1.28e-06 2.58e-06 5.76e-07 4.36e-07 1.07e-06 1.11e-06 1.21e-06 5.52e-07 7.55e-07 6.59e-07 1.96e-06 1.55e-06 8.39e-07 2.42e-06 9.87e-07 1.12e-06 1.3e-06 1.74e-06 1.4e-06 7.58e-07 2.48e-07 4e-07 6.91e-07 8.94e-07 6.4e-07 6.87e-07 3.71e-07 4.85e-07 2.57e-07 2.29e-07 2.2e-06 3.49e-07 1.91e-07 3.4e-07 2.98e-07 4.08e-07 2.65e-07 2.46e-07