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Genes within 1Mb (chr12:96702223:GA:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 301743 sc-eQTL 1.41e-01 -0.0649 0.0439 0.402 B L1
ENSG00000111144 LTA4H 658703 sc-eQTL 1.84e-01 -0.0728 0.0546 0.402 B L1
ENSG00000111145 ELK3 507848 sc-eQTL 6.71e-01 -0.0248 0.0584 0.402 B L1
ENSG00000139343 SNRPF 843295 sc-eQTL 6.26e-01 -0.0259 0.053 0.402 B L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.57e-01 0.0878 0.0772 0.402 B L1
ENSG00000059758 CDK17 301743 sc-eQTL 8.82e-01 0.00548 0.0368 0.402 CD4T L1
ENSG00000111144 LTA4H 658703 sc-eQTL 6.24e-01 -0.0248 0.0505 0.402 CD4T L1
ENSG00000111145 ELK3 507848 sc-eQTL 8.34e-01 0.0115 0.0547 0.402 CD4T L1
ENSG00000139343 SNRPF 843295 sc-eQTL 3.23e-01 0.0473 0.0477 0.402 CD4T L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.32e-01 0.0885 0.0586 0.402 CD4T L1
ENSG00000059758 CDK17 301743 sc-eQTL 8.82e-01 -0.00555 0.0375 0.402 CD8T L1
ENSG00000111144 LTA4H 658703 sc-eQTL 5.45e-01 0.0244 0.0402 0.402 CD8T L1
ENSG00000111145 ELK3 507848 sc-eQTL 1.85e-01 0.0802 0.0603 0.402 CD8T L1
ENSG00000139343 SNRPF 843295 sc-eQTL 5.75e-01 -0.0278 0.0496 0.402 CD8T L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.42e-01 0.0403 0.0659 0.402 CD8T L1
ENSG00000059758 CDK17 301743 sc-eQTL 7.35e-01 0.0238 0.0704 0.405 DC L1
ENSG00000084110 HAL 705858 sc-eQTL 8.92e-01 0.0109 0.0802 0.405 DC L1
ENSG00000111144 LTA4H 658703 sc-eQTL 1.32e-01 -0.0987 0.0652 0.405 DC L1
ENSG00000111145 ELK3 507848 sc-eQTL 8.28e-01 0.0175 0.0803 0.405 DC L1
ENSG00000139343 SNRPF 843295 sc-eQTL 5.34e-01 -0.0416 0.0667 0.405 DC L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 7.75e-02 0.151 0.085 0.405 DC L1
ENSG00000257715 AC007298.1 676900 sc-eQTL 4.57e-01 0.0576 0.0773 0.405 DC L1
ENSG00000059758 CDK17 301743 sc-eQTL 2.36e-01 0.0677 0.0569 0.402 Mono L1
ENSG00000084110 HAL 705858 sc-eQTL 7.70e-01 0.021 0.072 0.402 Mono L1
ENSG00000111144 LTA4H 658703 sc-eQTL 1.25e-01 -0.124 0.0808 0.402 Mono L1
ENSG00000111145 ELK3 507848 sc-eQTL 2.99e-01 0.0566 0.0544 0.402 Mono L1
ENSG00000139343 SNRPF 843295 sc-eQTL 4.07e-01 0.0427 0.0514 0.402 Mono L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.99e-02 0.171 0.0781 0.402 Mono L1
ENSG00000257715 AC007298.1 676900 sc-eQTL 4.03e-02 -0.156 0.0758 0.402 Mono L1
ENSG00000059758 CDK17 301743 sc-eQTL 2.02e-01 -0.0543 0.0425 0.399 NK L1
ENSG00000111144 LTA4H 658703 sc-eQTL 3.15e-01 0.0727 0.0723 0.399 NK L1
ENSG00000111145 ELK3 507848 sc-eQTL 7.94e-01 0.0179 0.0687 0.399 NK L1
ENSG00000139343 SNRPF 843295 sc-eQTL 4.83e-01 -0.04 0.0569 0.399 NK L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.88e-01 -0.0391 0.0721 0.399 NK L1
ENSG00000059758 CDK17 301743 sc-eQTL 9.85e-01 -0.000645 0.0354 0.402 Other_T L1
ENSG00000074527 NTN4 911071 sc-eQTL 5.82e-01 0.036 0.0654 0.402 Other_T L1
ENSG00000111144 LTA4H 658703 sc-eQTL 6.57e-01 0.0329 0.0739 0.402 Other_T L1
ENSG00000111145 ELK3 507848 sc-eQTL 6.39e-01 0.0271 0.0577 0.402 Other_T L1
ENSG00000139343 SNRPF 843295 sc-eQTL 9.59e-01 -0.00278 0.0537 0.402 Other_T L1
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.57e-01 0.0925 0.0814 0.402 Other_T L1
ENSG00000188596 CFAP54 212652 sc-eQTL 2.62e-01 -0.0948 0.0844 0.402 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 301743 sc-eQTL 6.08e-01 0.0418 0.0814 0.406 B_Activated L2
ENSG00000111144 LTA4H 658703 sc-eQTL 1.98e-01 -0.119 0.0918 0.406 B_Activated L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.42e-01 -0.0597 0.0976 0.406 B_Activated L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.59e-01 -0.0683 0.092 0.406 B_Activated L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.13e-01 0.12 0.0959 0.406 B_Activated L2
ENSG00000059758 CDK17 301743 sc-eQTL 2.17e-01 -0.0846 0.0684 0.401 B_Intermediate L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.26e-02 -0.123 0.0659 0.401 B_Intermediate L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.68e-01 0.0428 0.0749 0.401 B_Intermediate L2
ENSG00000139343 SNRPF 843295 sc-eQTL 5.16e-01 -0.0485 0.0746 0.401 B_Intermediate L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.29e-01 -0.055 0.0873 0.401 B_Intermediate L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.13e-01 -0.00741 0.0675 0.399 B_Memory L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.04e-01 0.0405 0.0779 0.399 B_Memory L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.20e-01 -0.00772 0.0766 0.399 B_Memory L2
ENSG00000139343 SNRPF 843295 sc-eQTL 6.19e-01 0.0404 0.0812 0.399 B_Memory L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.38e-01 -0.133 0.0894 0.399 B_Memory L2
ENSG00000059758 CDK17 301743 sc-eQTL 1.48e-01 -0.0807 0.0555 0.402 B_Naive1 L2
ENSG00000111144 LTA4H 658703 sc-eQTL 4.38e-01 -0.0453 0.0584 0.402 B_Naive1 L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.53e-01 -0.041 0.069 0.402 B_Naive1 L2
ENSG00000139343 SNRPF 843295 sc-eQTL 3.96e-01 -0.0571 0.0671 0.402 B_Naive1 L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 3.64e-01 0.0783 0.086 0.402 B_Naive1 L2
ENSG00000059758 CDK17 301743 sc-eQTL 3.86e-01 -0.062 0.0714 0.401 B_Naive2 L2
ENSG00000111144 LTA4H 658703 sc-eQTL 4.56e-01 -0.0506 0.0677 0.401 B_Naive2 L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.84e-01 -0.0326 0.0799 0.401 B_Naive2 L2
ENSG00000139343 SNRPF 843295 sc-eQTL 6.52e-01 -0.0358 0.0793 0.401 B_Naive2 L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.38e-01 0.14 0.0938 0.401 B_Naive2 L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.50e-01 0.00415 0.0655 0.398 CD4_CTL L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.02e-01 -0.0482 0.0924 0.398 CD4_CTL L2
ENSG00000111145 ELK3 507848 sc-eQTL 4.97e-01 0.0636 0.0935 0.398 CD4_CTL L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.92e-01 -0.0559 0.0812 0.398 CD4_CTL L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.04e-01 0.153 0.0934 0.398 CD4_CTL L2
ENSG00000059758 CDK17 301743 sc-eQTL 7.72e-01 -0.0117 0.0404 0.402 CD4_Naive L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.27e-01 -0.0284 0.0584 0.402 CD4_Naive L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.19e-01 0.0291 0.0584 0.402 CD4_Naive L2
ENSG00000139343 SNRPF 843295 sc-eQTL 3.71e-01 0.0465 0.0518 0.402 CD4_Naive L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.36e-01 0.0952 0.0636 0.402 CD4_Naive L2
ENSG00000059758 CDK17 301743 sc-eQTL 8.40e-01 0.00802 0.0395 0.402 CD4_TCM L2
ENSG00000111144 LTA4H 658703 sc-eQTL 8.91e-01 0.00921 0.0671 0.402 CD4_TCM L2
ENSG00000111145 ELK3 507848 sc-eQTL 7.92e-01 0.0174 0.066 0.402 CD4_TCM L2
ENSG00000139343 SNRPF 843295 sc-eQTL 1.63e-01 0.0755 0.0539 0.402 CD4_TCM L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 6.97e-01 -0.0288 0.074 0.402 CD4_TCM L2
ENSG00000059758 CDK17 301743 sc-eQTL 1.27e-01 -0.074 0.0483 0.402 CD4_TEM L2
ENSG00000111144 LTA4H 658703 sc-eQTL 5.78e-01 -0.0417 0.075 0.402 CD4_TEM L2
ENSG00000111145 ELK3 507848 sc-eQTL 2.10e-01 -0.0874 0.0695 0.402 CD4_TEM L2
ENSG00000139343 SNRPF 843295 sc-eQTL 7.06e-01 0.0275 0.073 0.402 CD4_TEM L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.15e-01 0.136 0.0861 0.402 CD4_TEM L2
ENSG00000059758 CDK17 301743 sc-eQTL 6.10e-01 -0.0242 0.0474 0.402 CD8_CTL L2
ENSG00000111144 LTA4H 658703 sc-eQTL 3.26e-01 0.0842 0.0855 0.402 CD8_CTL L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.05e-01 -0.00935 0.078 0.402 CD8_CTL L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.23e-01 -0.0575 0.0716 0.402 CD8_CTL L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 3.87e-01 0.0697 0.0803 0.402 CD8_CTL L2
ENSG00000059758 CDK17 301743 sc-eQTL 3.79e-01 0.0497 0.0564 0.402 CD8_Naive L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.23e-01 0.0333 0.0676 0.402 CD8_Naive L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.93e-02 0.118 0.0711 0.402 CD8_Naive L2
ENSG00000139343 SNRPF 843295 sc-eQTL 1.94e-01 -0.0835 0.0641 0.402 CD8_Naive L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 3.48e-01 0.0719 0.0765 0.402 CD8_Naive L2
ENSG00000059758 CDK17 301743 sc-eQTL 5.08e-02 -0.121 0.0616 0.405 CD8_TCM L2
ENSG00000111144 LTA4H 658703 sc-eQTL 3.88e-01 -0.079 0.0912 0.405 CD8_TCM L2
ENSG00000111145 ELK3 507848 sc-eQTL 3.17e-01 0.0776 0.0772 0.405 CD8_TCM L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.01e-01 -0.0749 0.089 0.405 CD8_TCM L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 8.62e-01 0.0152 0.0873 0.405 CD8_TCM L2
ENSG00000059758 CDK17 301743 sc-eQTL 8.01e-01 0.0197 0.0777 0.406 CD8_TEM L2
ENSG00000111144 LTA4H 658703 sc-eQTL 7.94e-01 -0.0248 0.0952 0.406 CD8_TEM L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.75e-01 -0.0393 0.0936 0.406 CD8_TEM L2
ENSG00000139343 SNRPF 843295 sc-eQTL 8.52e-01 -0.0162 0.087 0.406 CD8_TEM L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 4.56e-01 0.0704 0.0943 0.406 CD8_TEM L2
ENSG00000059758 CDK17 301743 sc-eQTL 6.98e-01 0.0198 0.0511 0.403 MAIT L2
ENSG00000074527 NTN4 911071 sc-eQTL 7.40e-01 0.0229 0.0689 0.403 MAIT L2
ENSG00000111144 LTA4H 658703 sc-eQTL 8.90e-01 0.0109 0.079 0.403 MAIT L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.30e-01 0.032 0.0663 0.403 MAIT L2
ENSG00000139343 SNRPF 843295 sc-eQTL 6.74e-01 0.0323 0.0768 0.403 MAIT L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 6.51e-01 0.0391 0.0863 0.403 MAIT L2
ENSG00000188596 CFAP54 212652 sc-eQTL 7.81e-01 -0.0238 0.0855 0.403 MAIT L2
ENSG00000059758 CDK17 301743 sc-eQTL 4.59e-03 -0.153 0.0533 0.398 NK_CD56bright L2
ENSG00000111144 LTA4H 658703 sc-eQTL 3.97e-01 -0.0682 0.0803 0.398 NK_CD56bright L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.49e-01 0.00552 0.0854 0.398 NK_CD56bright L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.30e-03 -0.253 0.0875 0.398 NK_CD56bright L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 9.39e-01 -0.00687 0.0901 0.398 NK_CD56bright L2
ENSG00000059758 CDK17 301743 sc-eQTL 2.28e-01 -0.0557 0.046 0.397 NK_CD56dim L2
ENSG00000111144 LTA4H 658703 sc-eQTL 5.32e-01 0.0522 0.0833 0.397 NK_CD56dim L2
ENSG00000111145 ELK3 507848 sc-eQTL 7.51e-01 0.0234 0.0738 0.397 NK_CD56dim L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.73e-01 0.0505 0.0702 0.397 NK_CD56dim L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.43e-01 0.0493 0.0809 0.397 NK_CD56dim L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.15e-01 -0.00769 0.0719 0.397 NK_HLA L2
ENSG00000111144 LTA4H 658703 sc-eQTL 7.74e-01 0.0271 0.0943 0.397 NK_HLA L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.35e-02 -0.168 0.0867 0.397 NK_HLA L2
ENSG00000139343 SNRPF 843295 sc-eQTL 3.96e-01 -0.0774 0.091 0.397 NK_HLA L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.28e-01 0.0545 0.0862 0.397 NK_HLA L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.11e-01 -0.00568 0.0508 0.397 NK_cytokine L2
ENSG00000111144 LTA4H 658703 sc-eQTL 5.04e-01 0.0574 0.0857 0.397 NK_cytokine L2
ENSG00000111145 ELK3 507848 sc-eQTL 2.42e-01 0.0962 0.0819 0.397 NK_cytokine L2
ENSG00000139343 SNRPF 843295 sc-eQTL 1.85e-01 -0.0923 0.0693 0.397 NK_cytokine L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.03e-02 -0.168 0.0853 0.397 NK_cytokine L2
ENSG00000059758 CDK17 301743 sc-eQTL 2.58e-02 0.223 0.0989 0.389 PB L2
ENSG00000111144 LTA4H 658703 sc-eQTL 4.85e-01 -0.0623 0.089 0.389 PB L2
ENSG00000111145 ELK3 507848 sc-eQTL 2.84e-02 -0.248 0.112 0.389 PB L2
ENSG00000139343 SNRPF 843295 sc-eQTL 1.02e-01 -0.182 0.11 0.389 PB L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 8.30e-01 0.0286 0.133 0.389 PB L2
ENSG00000059758 CDK17 301743 sc-eQTL 2.20e-01 0.0681 0.0553 0.407 Pro_T L2
ENSG00000074527 NTN4 911071 sc-eQTL 3.20e-01 0.0619 0.0622 0.407 Pro_T L2
ENSG00000111144 LTA4H 658703 sc-eQTL 4.91e-01 -0.0505 0.0732 0.407 Pro_T L2
ENSG00000111145 ELK3 507848 sc-eQTL 4.03e-01 0.0742 0.0885 0.407 Pro_T L2
ENSG00000139343 SNRPF 843295 sc-eQTL 4.85e-01 -0.0391 0.0558 0.407 Pro_T L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 9.38e-01 0.00632 0.0812 0.407 Pro_T L2
ENSG00000188596 CFAP54 212652 sc-eQTL 8.33e-01 -0.0138 0.0657 0.407 Pro_T L2
ENSG00000059758 CDK17 301743 sc-eQTL 3.41e-01 0.0582 0.0609 0.402 Treg L2
ENSG00000111144 LTA4H 658703 sc-eQTL 4.69e-01 0.0561 0.0772 0.402 Treg L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.15e-01 0.0352 0.07 0.402 Treg L2
ENSG00000139343 SNRPF 843295 sc-eQTL 5.64e-01 -0.0468 0.0811 0.402 Treg L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 6.89e-01 0.0362 0.0905 0.402 Treg L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.82e-01 -0.00172 0.0761 0.405 cDC L2
ENSG00000084110 HAL 705858 sc-eQTL 8.21e-01 0.0179 0.0791 0.405 cDC L2
ENSG00000111144 LTA4H 658703 sc-eQTL 2.83e-02 -0.148 0.0669 0.405 cDC L2
ENSG00000111145 ELK3 507848 sc-eQTL 6.67e-01 -0.0385 0.0894 0.405 cDC L2
ENSG00000139343 SNRPF 843295 sc-eQTL 8.57e-01 -0.0135 0.0749 0.405 cDC L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.70e-01 0.101 0.0909 0.405 cDC L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 9.54e-01 -0.00446 0.0769 0.405 cDC L2
ENSG00000059758 CDK17 301743 sc-eQTL 2.69e-02 0.144 0.0647 0.402 cMono_IL1B L2
ENSG00000084110 HAL 705858 sc-eQTL 5.67e-01 0.0409 0.0714 0.402 cMono_IL1B L2
ENSG00000111144 LTA4H 658703 sc-eQTL 6.29e-02 -0.143 0.0765 0.402 cMono_IL1B L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.27e-02 0.115 0.0589 0.402 cMono_IL1B L2
ENSG00000139343 SNRPF 843295 sc-eQTL 6.28e-01 0.0298 0.0613 0.402 cMono_IL1B L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.33e-03 0.255 0.0826 0.402 cMono_IL1B L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 5.71e-02 -0.149 0.0781 0.402 cMono_IL1B L2
ENSG00000059758 CDK17 301743 sc-eQTL 4.15e-01 0.0609 0.0746 0.402 cMono_S100A L2
ENSG00000084110 HAL 705858 sc-eQTL 4.80e-01 -0.0592 0.0837 0.402 cMono_S100A L2
ENSG00000111144 LTA4H 658703 sc-eQTL 3.49e-01 -0.0784 0.0836 0.402 cMono_S100A L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.28e-01 -0.00616 0.0682 0.402 cMono_S100A L2
ENSG00000139343 SNRPF 843295 sc-eQTL 9.00e-01 -0.00846 0.0674 0.402 cMono_S100A L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 6.72e-01 0.0385 0.0909 0.402 cMono_S100A L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 3.66e-02 -0.178 0.0847 0.402 cMono_S100A L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.78e-01 0.00203 0.0739 0.403 gdT L2
ENSG00000074527 NTN4 911071 sc-eQTL 4.02e-01 -0.071 0.0846 0.403 gdT L2
ENSG00000111144 LTA4H 658703 sc-eQTL 8.93e-01 0.0149 0.11 0.403 gdT L2
ENSG00000111145 ELK3 507848 sc-eQTL 7.13e-01 0.0377 0.102 0.403 gdT L2
ENSG00000139343 SNRPF 843295 sc-eQTL 7.90e-02 -0.173 0.0976 0.403 gdT L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 6.75e-01 0.0458 0.109 0.403 gdT L2
ENSG00000188596 CFAP54 212652 sc-eQTL 6.91e-01 -0.038 0.0954 0.403 gdT L2
ENSG00000059758 CDK17 301743 sc-eQTL 5.74e-01 0.0469 0.0832 0.404 intMono L2
ENSG00000084110 HAL 705858 sc-eQTL 2.43e-01 -0.0984 0.0839 0.404 intMono L2
ENSG00000111144 LTA4H 658703 sc-eQTL 7.22e-02 -0.155 0.0857 0.404 intMono L2
ENSG00000111145 ELK3 507848 sc-eQTL 5.24e-01 0.0491 0.0769 0.404 intMono L2
ENSG00000139343 SNRPF 843295 sc-eQTL 8.08e-01 0.02 0.0822 0.404 intMono L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.31e-01 0.129 0.085 0.404 intMono L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 1.14e-01 -0.135 0.0854 0.404 intMono L2
ENSG00000059758 CDK17 301743 sc-eQTL 9.33e-01 0.00564 0.0669 0.412 ncMono L2
ENSG00000084110 HAL 705858 sc-eQTL 8.46e-01 -0.0145 0.0747 0.412 ncMono L2
ENSG00000111144 LTA4H 658703 sc-eQTL 7.09e-01 -0.0311 0.0833 0.412 ncMono L2
ENSG00000111145 ELK3 507848 sc-eQTL 8.78e-01 0.011 0.0715 0.412 ncMono L2
ENSG00000139343 SNRPF 843295 sc-eQTL 3.93e-01 0.0624 0.0729 0.412 ncMono L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.78e-01 -0.0431 0.0775 0.412 ncMono L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 4.68e-01 -0.0644 0.0884 0.412 ncMono L2
ENSG00000059758 CDK17 301743 sc-eQTL 5.09e-01 0.0579 0.0874 0.407 pDC L2
ENSG00000084110 HAL 705858 sc-eQTL 8.11e-01 0.0177 0.0739 0.407 pDC L2
ENSG00000111144 LTA4H 658703 sc-eQTL 3.14e-02 -0.177 0.0815 0.407 pDC L2
ENSG00000111145 ELK3 507848 sc-eQTL 9.95e-01 -0.000624 0.101 0.407 pDC L2
ENSG00000139343 SNRPF 843295 sc-eQTL 3.08e-01 -0.0901 0.088 0.407 pDC L2
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.35e-01 0.145 0.0968 0.407 pDC L2
ENSG00000257715 AC007298.1 676900 sc-eQTL 2.35e-01 -0.0991 0.0832 0.407 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 301743 sc-eQTL 4.22e-01 -0.0464 0.0576 0.402 B_Memory LOneK1K
ENSG00000111144 LTA4H 658703 sc-eQTL 1.48e-01 -0.0867 0.0596 0.402 B_Memory LOneK1K
ENSG00000111145 ELK3 507848 sc-eQTL 7.19e-01 0.0247 0.0685 0.402 B_Memory LOneK1K
ENSG00000139343 SNRPF 843295 sc-eQTL 9.20e-01 -0.00663 0.0664 0.402 B_Memory LOneK1K
ENSG00000139350 NEDD1 -205000 sc-eQTL 3.98e-01 -0.0735 0.0869 0.402 B_Memory LOneK1K
ENSG00000059758 CDK17 301743 sc-eQTL 8.90e-02 -0.0849 0.0497 0.402 B_Naive LOneK1K
ENSG00000111144 LTA4H 658703 sc-eQTL 1.81e-01 -0.0751 0.056 0.402 B_Naive LOneK1K
ENSG00000111145 ELK3 507848 sc-eQTL 6.95e-01 -0.0251 0.064 0.402 B_Naive LOneK1K
ENSG00000139343 SNRPF 843295 sc-eQTL 5.69e-01 -0.0368 0.0644 0.402 B_Naive LOneK1K
ENSG00000139350 NEDD1 -205000 sc-eQTL 1.36e-01 0.127 0.0848 0.402 B_Naive LOneK1K
ENSG00000059758 CDK17 301743 sc-eQTL 2.34e-02 0.134 0.0586 0.402 CD14_Mono LOneK1K
ENSG00000084110 HAL 705858 sc-eQTL 6.94e-01 0.0283 0.0718 0.402 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 658703 sc-eQTL 9.85e-02 -0.13 0.0783 0.402 CD14_Mono LOneK1K
ENSG00000111145 ELK3 507848 sc-eQTL 3.19e-01 0.0567 0.0568 0.402 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 843295 sc-eQTL 6.59e-01 0.0243 0.0549 0.402 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -205000 sc-eQTL 2.84e-02 0.188 0.0852 0.402 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 676900 sc-eQTL 2.69e-02 -0.176 0.0789 0.402 CD14_Mono LOneK1K
ENSG00000059758 CDK17 301743 sc-eQTL 5.36e-01 0.0381 0.0614 0.399 CD16_Mono LOneK1K
ENSG00000084110 HAL 705858 sc-eQTL 5.77e-01 -0.0406 0.0726 0.399 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 658703 sc-eQTL 2.17e-01 -0.0993 0.0803 0.399 CD16_Mono LOneK1K
ENSG00000111145 ELK3 507848 sc-eQTL 4.99e-01 0.0403 0.0595 0.399 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 843295 sc-eQTL 2.90e-01 0.0651 0.0613 0.399 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -205000 sc-eQTL 3.60e-01 0.0721 0.0787 0.399 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 676900 sc-eQTL 6.24e-01 -0.0409 0.0834 0.399 CD16_Mono LOneK1K
ENSG00000059758 CDK17 301743 sc-eQTL 4.74e-01 -0.031 0.0432 0.397 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 658703 sc-eQTL 1.24e-01 0.116 0.0748 0.397 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 507848 sc-eQTL 7.89e-01 0.0185 0.0689 0.397 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 843295 sc-eQTL 9.58e-01 0.00314 0.0589 0.397 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -205000 sc-eQTL 5.81e-01 -0.0406 0.0734 0.397 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000059758 CDK17 301743 eQTL 1.81e-02 0.0273 0.0115 0.00106 0.0 0.391
ENSG00000139350 NEDD1 -205000 eQTL 6.6e-06 0.105 0.0231 0.0 0.0 0.391
ENSG00000188596 CFAP54 212648 eQTL 0.00323 0.0573 0.0194 0.0 0.0 0.391

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139344 \N 758892 2.64e-07 1.1e-07 3.44e-08 1.79e-07 8.92e-08 9.91e-08 1.67e-07 5.24e-08 1.42e-07 4.38e-08 1.62e-07 8.02e-08 1.52e-07 6.21e-08 4.89e-08 8.01e-08 5.1e-08 1.1e-07 5.19e-08 2.85e-08 1.05e-07 1.27e-07 1.3e-07 4.99e-08 1.31e-07 1.16e-07 1.1e-07 8.45e-08 1.05e-07 1.1e-07 9.58e-08 3.41e-08 2.74e-08 8.25e-08 8.93e-08 4.12e-08 4.85e-08 9.06e-08 8.3e-08 3.07e-08 3.77e-08 1.36e-07 4.23e-08 5.83e-09 1.12e-07 1.72e-08 1.35e-07 4.82e-09 4.72e-08
ENSG00000139350 NEDD1 -205000 3.16e-06 2.98e-06 6.03e-07 1.71e-06 4.98e-07 8.09e-07 2.49e-06 2.73e-07 1.72e-06 9.91e-07 1.95e-06 7e-07 3.99e-06 3.41e-07 4.26e-07 9.27e-07 1.04e-06 1.09e-06 5.84e-07 6.02e-07 7.6e-07 1.96e-06 1.6e-06 5.64e-07 2.55e-06 1.22e-06 1.16e-06 8.75e-07 2.76e-06 1.3e-06 8.17e-07 1.82e-07 3.58e-07 1.8e-06 1.05e-06 4.77e-07 6.86e-07 3.18e-07 6.01e-07 3.34e-07 2.77e-07 4.71e-06 5.87e-07 3.99e-07 2.85e-07 2.95e-07 8.36e-07 3.09e-08 5.05e-08
ENSG00000188596 CFAP54 212648 2.71e-06 2.62e-06 4.68e-07 1.63e-06 4.39e-07 8.48e-07 2.26e-06 2.07e-07 1.74e-06 8.28e-07 2.02e-06 6.31e-07 3.54e-06 2.77e-07 4.96e-07 8.62e-07 1.11e-06 9.7e-07 7.04e-07 4.63e-07 8.02e-07 1.87e-06 1.47e-06 6.68e-07 2.37e-06 1.19e-06 1e-06 8.66e-07 2.45e-06 1.3e-06 7.64e-07 9.54e-08 3.19e-07 1.83e-06 9.39e-07 4.23e-07 6.81e-07 2.87e-07 4.98e-07 1.71e-07 3.02e-07 4.29e-06 4.85e-07 3.62e-07 3.22e-07 2.82e-07 7.09e-07 2.25e-08 5.69e-08