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Genes within 1Mb (chr12:96683980:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 283500 sc-eQTL 6.08e-01 -0.024 0.0467 0.335 B L1
ENSG00000111144 LTA4H 640460 sc-eQTL 2.47e-01 -0.0672 0.0578 0.335 B L1
ENSG00000111145 ELK3 489605 sc-eQTL 7.23e-01 0.0219 0.0617 0.335 B L1
ENSG00000139343 SNRPF 825052 sc-eQTL 7.21e-01 0.0201 0.0561 0.335 B L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 5.56e-02 0.156 0.0812 0.335 B L1
ENSG00000059758 CDK17 283500 sc-eQTL 6.83e-01 -0.0159 0.039 0.335 CD4T L1
ENSG00000111144 LTA4H 640460 sc-eQTL 7.01e-01 0.0206 0.0535 0.335 CD4T L1
ENSG00000111145 ELK3 489605 sc-eQTL 6.30e-01 0.028 0.058 0.335 CD4T L1
ENSG00000139343 SNRPF 825052 sc-eQTL 1.75e-01 0.0688 0.0505 0.335 CD4T L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.55e-01 0.0887 0.0621 0.335 CD4T L1
ENSG00000059758 CDK17 283500 sc-eQTL 9.83e-01 -0.000829 0.0399 0.335 CD8T L1
ENSG00000111144 LTA4H 640460 sc-eQTL 8.45e-01 0.00839 0.0428 0.335 CD8T L1
ENSG00000111145 ELK3 489605 sc-eQTL 2.13e-01 0.0802 0.0642 0.335 CD8T L1
ENSG00000139343 SNRPF 825052 sc-eQTL 5.70e-01 -0.03 0.0528 0.335 CD8T L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 3.80e-01 0.0617 0.0701 0.335 CD8T L1
ENSG00000059758 CDK17 283500 sc-eQTL 7.82e-01 -0.0205 0.0738 0.34 DC L1
ENSG00000084110 HAL 687615 sc-eQTL 7.11e-01 0.0312 0.084 0.34 DC L1
ENSG00000111144 LTA4H 640460 sc-eQTL 1.21e-01 -0.106 0.0683 0.34 DC L1
ENSG00000111145 ELK3 489605 sc-eQTL 4.33e-01 0.066 0.084 0.34 DC L1
ENSG00000139343 SNRPF 825052 sc-eQTL 3.49e-01 -0.0656 0.0698 0.34 DC L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.73e-02 0.158 0.0891 0.34 DC L1
ENSG00000257715 AC007298.1 658657 sc-eQTL 5.56e-01 0.0477 0.081 0.34 DC L1
ENSG00000059758 CDK17 283500 sc-eQTL 4.67e-01 0.0439 0.0602 0.335 Mono L1
ENSG00000084110 HAL 687615 sc-eQTL 9.02e-01 0.00939 0.0759 0.335 Mono L1
ENSG00000111144 LTA4H 640460 sc-eQTL 1.40e-01 -0.126 0.0853 0.335 Mono L1
ENSG00000111145 ELK3 489605 sc-eQTL 3.71e-01 0.0515 0.0575 0.335 Mono L1
ENSG00000139343 SNRPF 825052 sc-eQTL 3.80e-01 0.0477 0.0542 0.335 Mono L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 5.60e-02 0.159 0.0826 0.335 Mono L1
ENSG00000257715 AC007298.1 658657 sc-eQTL 1.92e-02 -0.188 0.0798 0.335 Mono L1
ENSG00000059758 CDK17 283500 sc-eQTL 6.32e-02 -0.0838 0.0449 0.335 NK L1
ENSG00000111144 LTA4H 640460 sc-eQTL 1.37e-01 0.114 0.0764 0.335 NK L1
ENSG00000111145 ELK3 489605 sc-eQTL 6.81e-01 0.03 0.0729 0.335 NK L1
ENSG00000139343 SNRPF 825052 sc-eQTL 6.37e-01 -0.0286 0.0604 0.335 NK L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 8.88e-01 -0.0107 0.0765 0.335 NK L1
ENSG00000059758 CDK17 283500 sc-eQTL 7.32e-01 -0.0129 0.0376 0.335 Other_T L1
ENSG00000074527 NTN4 892828 sc-eQTL 9.27e-01 0.00638 0.0694 0.335 Other_T L1
ENSG00000111144 LTA4H 640460 sc-eQTL 2.49e-01 0.0906 0.0783 0.335 Other_T L1
ENSG00000111145 ELK3 489605 sc-eQTL 4.35e-01 0.0478 0.0612 0.335 Other_T L1
ENSG00000139343 SNRPF 825052 sc-eQTL 5.68e-01 -0.0325 0.0569 0.335 Other_T L1
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.71e-01 0.0253 0.0867 0.335 Other_T L1
ENSG00000188596 CFAP54 194409 sc-eQTL 8.38e-01 -0.0184 0.0898 0.335 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 283500 sc-eQTL 4.98e-01 0.0584 0.0859 0.344 B_Activated L2
ENSG00000111144 LTA4H 640460 sc-eQTL 6.15e-01 -0.0491 0.0973 0.344 B_Activated L2
ENSG00000111145 ELK3 489605 sc-eQTL 9.82e-01 -0.00231 0.103 0.344 B_Activated L2
ENSG00000139343 SNRPF 825052 sc-eQTL 6.33e-01 -0.0465 0.0972 0.344 B_Activated L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 4.73e-01 0.073 0.102 0.344 B_Activated L2
ENSG00000059758 CDK17 283500 sc-eQTL 5.47e-01 -0.0445 0.0736 0.337 B_Intermediate L2
ENSG00000111144 LTA4H 640460 sc-eQTL 2.20e-01 -0.0874 0.0711 0.337 B_Intermediate L2
ENSG00000111145 ELK3 489605 sc-eQTL 4.47e-01 0.0612 0.0804 0.337 B_Intermediate L2
ENSG00000139343 SNRPF 825052 sc-eQTL 8.85e-01 -0.0116 0.0801 0.337 B_Intermediate L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 8.63e-01 0.0163 0.0939 0.337 B_Intermediate L2
ENSG00000059758 CDK17 283500 sc-eQTL 8.21e-01 0.0163 0.072 0.332 B_Memory L2
ENSG00000111144 LTA4H 640460 sc-eQTL 2.90e-01 0.0879 0.0829 0.332 B_Memory L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.60e-01 0.0144 0.0817 0.332 B_Memory L2
ENSG00000139343 SNRPF 825052 sc-eQTL 6.42e-01 0.0403 0.0866 0.332 B_Memory L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 6.85e-02 -0.174 0.0951 0.332 B_Memory L2
ENSG00000059758 CDK17 283500 sc-eQTL 2.92e-01 -0.0622 0.0588 0.335 B_Naive1 L2
ENSG00000111144 LTA4H 640460 sc-eQTL 3.44e-01 -0.0584 0.0616 0.335 B_Naive1 L2
ENSG00000111145 ELK3 489605 sc-eQTL 5.90e-01 -0.0394 0.0729 0.335 B_Naive1 L2
ENSG00000139343 SNRPF 825052 sc-eQTL 5.87e-01 -0.0386 0.0709 0.335 B_Naive1 L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 2.05e-01 0.115 0.0907 0.335 B_Naive1 L2
ENSG00000059758 CDK17 283500 sc-eQTL 4.54e-01 -0.0574 0.0764 0.335 B_Naive2 L2
ENSG00000111144 LTA4H 640460 sc-eQTL 5.93e-01 -0.0388 0.0725 0.335 B_Naive2 L2
ENSG00000111145 ELK3 489605 sc-eQTL 4.97e-01 0.0581 0.0854 0.335 B_Naive2 L2
ENSG00000139343 SNRPF 825052 sc-eQTL 6.72e-01 -0.036 0.0849 0.335 B_Naive2 L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.20e-01 0.157 0.1 0.335 B_Naive2 L2
ENSG00000059758 CDK17 283500 sc-eQTL 6.72e-01 0.0294 0.0693 0.33 CD4_CTL L2
ENSG00000111144 LTA4H 640460 sc-eQTL 4.07e-01 0.0811 0.0977 0.33 CD4_CTL L2
ENSG00000111145 ELK3 489605 sc-eQTL 7.40e-01 0.0329 0.099 0.33 CD4_CTL L2
ENSG00000139343 SNRPF 825052 sc-eQTL 6.97e-01 -0.0336 0.0861 0.33 CD4_CTL L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.72e-01 0.136 0.0991 0.33 CD4_CTL L2
ENSG00000059758 CDK17 283500 sc-eQTL 4.59e-01 -0.0316 0.0426 0.335 CD4_Naive L2
ENSG00000111144 LTA4H 640460 sc-eQTL 4.41e-01 0.0476 0.0616 0.335 CD4_Naive L2
ENSG00000111145 ELK3 489605 sc-eQTL 6.37e-01 0.0291 0.0617 0.335 CD4_Naive L2
ENSG00000139343 SNRPF 825052 sc-eQTL 2.50e-01 0.063 0.0547 0.335 CD4_Naive L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.09e-01 0.108 0.0671 0.335 CD4_Naive L2
ENSG00000059758 CDK17 283500 sc-eQTL 7.35e-01 0.0141 0.0416 0.335 CD4_TCM L2
ENSG00000111144 LTA4H 640460 sc-eQTL 4.61e-01 0.0521 0.0706 0.335 CD4_TCM L2
ENSG00000111145 ELK3 489605 sc-eQTL 9.37e-01 0.0055 0.0695 0.335 CD4_TCM L2
ENSG00000139343 SNRPF 825052 sc-eQTL 2.70e-02 0.125 0.0564 0.335 CD4_TCM L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 6.84e-01 -0.0317 0.0779 0.335 CD4_TCM L2
ENSG00000059758 CDK17 283500 sc-eQTL 1.47e-01 -0.0746 0.0513 0.335 CD4_TEM L2
ENSG00000111144 LTA4H 640460 sc-eQTL 1.29e-01 -0.121 0.0792 0.335 CD4_TEM L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.93e-01 -0.00996 0.074 0.335 CD4_TEM L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.98e-01 0.0526 0.0774 0.335 CD4_TEM L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 6.40e-02 0.17 0.0912 0.335 CD4_TEM L2
ENSG00000059758 CDK17 283500 sc-eQTL 2.57e-01 -0.0568 0.05 0.335 CD8_CTL L2
ENSG00000111144 LTA4H 640460 sc-eQTL 4.33e-01 0.0711 0.0904 0.335 CD8_CTL L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.07e-01 0.0202 0.0824 0.335 CD8_CTL L2
ENSG00000139343 SNRPF 825052 sc-eQTL 2.54e-01 -0.0864 0.0755 0.335 CD8_CTL L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.49e-01 0.122 0.0846 0.335 CD8_CTL L2
ENSG00000059758 CDK17 283500 sc-eQTL 8.23e-01 0.0135 0.0603 0.335 CD8_Naive L2
ENSG00000111144 LTA4H 640460 sc-eQTL 7.38e-01 0.0242 0.0722 0.335 CD8_Naive L2
ENSG00000111145 ELK3 489605 sc-eQTL 7.81e-02 0.134 0.0758 0.335 CD8_Naive L2
ENSG00000139343 SNRPF 825052 sc-eQTL 1.32e-01 -0.103 0.0683 0.335 CD8_Naive L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 6.35e-01 0.0388 0.0817 0.335 CD8_Naive L2
ENSG00000059758 CDK17 283500 sc-eQTL 2.12e-01 -0.0813 0.065 0.34 CD8_TCM L2
ENSG00000111144 LTA4H 640460 sc-eQTL 8.42e-01 0.0191 0.0959 0.34 CD8_TCM L2
ENSG00000111145 ELK3 489605 sc-eQTL 4.53e-01 0.0609 0.0811 0.34 CD8_TCM L2
ENSG00000139343 SNRPF 825052 sc-eQTL 9.78e-01 -0.00259 0.0935 0.34 CD8_TCM L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 9.27e-01 0.00843 0.0916 0.34 CD8_TCM L2
ENSG00000059758 CDK17 283500 sc-eQTL 3.14e-01 0.0834 0.0826 0.338 CD8_TEM L2
ENSG00000111144 LTA4H 640460 sc-eQTL 9.31e-01 0.00881 0.101 0.338 CD8_TEM L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.75e-01 -0.0157 0.0996 0.338 CD8_TEM L2
ENSG00000139343 SNRPF 825052 sc-eQTL 7.64e-01 -0.0278 0.0926 0.338 CD8_TEM L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 9.03e-01 0.0123 0.101 0.338 CD8_TEM L2
ENSG00000059758 CDK17 283500 sc-eQTL 3.84e-01 0.0474 0.0543 0.335 MAIT L2
ENSG00000074527 NTN4 892828 sc-eQTL 9.19e-01 -0.00747 0.0733 0.335 MAIT L2
ENSG00000111144 LTA4H 640460 sc-eQTL 5.89e-01 0.0454 0.084 0.335 MAIT L2
ENSG00000111145 ELK3 489605 sc-eQTL 5.14e-01 0.0461 0.0705 0.335 MAIT L2
ENSG00000139343 SNRPF 825052 sc-eQTL 7.81e-01 0.0228 0.0817 0.335 MAIT L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 9.43e-01 0.00651 0.0918 0.335 MAIT L2
ENSG00000188596 CFAP54 194409 sc-eQTL 8.96e-01 0.0119 0.0909 0.335 MAIT L2
ENSG00000059758 CDK17 283500 sc-eQTL 1.45e-02 -0.14 0.0567 0.333 NK_CD56bright L2
ENSG00000111144 LTA4H 640460 sc-eQTL 5.84e-01 -0.0467 0.085 0.333 NK_CD56bright L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.99e-01 0.0115 0.0903 0.333 NK_CD56bright L2
ENSG00000139343 SNRPF 825052 sc-eQTL 1.46e-03 -0.297 0.0921 0.333 NK_CD56bright L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 3.55e-01 -0.0881 0.0951 0.333 NK_CD56bright L2
ENSG00000059758 CDK17 283500 sc-eQTL 1.49e-01 -0.0705 0.0487 0.332 NK_CD56dim L2
ENSG00000111144 LTA4H 640460 sc-eQTL 2.13e-01 0.11 0.0881 0.332 NK_CD56dim L2
ENSG00000111145 ELK3 489605 sc-eQTL 9.76e-01 0.00234 0.0783 0.332 NK_CD56dim L2
ENSG00000139343 SNRPF 825052 sc-eQTL 8.09e-01 0.0181 0.0745 0.332 NK_CD56dim L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 3.61e-01 0.0784 0.0856 0.332 NK_CD56dim L2
ENSG00000059758 CDK17 283500 sc-eQTL 4.26e-01 -0.0603 0.0755 0.333 NK_HLA L2
ENSG00000111144 LTA4H 640460 sc-eQTL 2.49e-01 0.114 0.0989 0.333 NK_HLA L2
ENSG00000111145 ELK3 489605 sc-eQTL 1.60e-01 -0.129 0.0916 0.333 NK_HLA L2
ENSG00000139343 SNRPF 825052 sc-eQTL 2.64e-01 -0.107 0.0956 0.333 NK_HLA L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 2.65e-01 0.101 0.0905 0.333 NK_HLA L2
ENSG00000059758 CDK17 283500 sc-eQTL 3.84e-01 -0.0465 0.0533 0.332 NK_cytokine L2
ENSG00000111144 LTA4H 640460 sc-eQTL 6.14e-01 0.0456 0.0903 0.332 NK_cytokine L2
ENSG00000111145 ELK3 489605 sc-eQTL 2.58e-01 0.0978 0.0862 0.332 NK_cytokine L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.57e-01 -0.0546 0.0732 0.332 NK_cytokine L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 6.43e-02 -0.167 0.0898 0.332 NK_cytokine L2
ENSG00000059758 CDK17 283500 sc-eQTL 2.02e-02 0.243 0.103 0.326 PB L2
ENSG00000111144 LTA4H 640460 sc-eQTL 6.25e-01 -0.0457 0.0932 0.326 PB L2
ENSG00000111145 ELK3 489605 sc-eQTL 6.78e-01 -0.0498 0.12 0.326 PB L2
ENSG00000139343 SNRPF 825052 sc-eQTL 3.67e-01 -0.105 0.116 0.326 PB L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.87e-01 0.0376 0.139 0.326 PB L2
ENSG00000059758 CDK17 283500 sc-eQTL 1.40e-01 0.0869 0.0586 0.339 Pro_T L2
ENSG00000074527 NTN4 892828 sc-eQTL 1.94e-01 0.0859 0.0659 0.339 Pro_T L2
ENSG00000111144 LTA4H 640460 sc-eQTL 9.40e-01 0.00588 0.0778 0.339 Pro_T L2
ENSG00000111145 ELK3 489605 sc-eQTL 3.51e-01 0.0878 0.0939 0.339 Pro_T L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.16e-01 -0.0483 0.0592 0.339 Pro_T L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 4.66e-01 -0.0628 0.0861 0.339 Pro_T L2
ENSG00000188596 CFAP54 194409 sc-eQTL 5.37e-01 0.0431 0.0697 0.339 Pro_T L2
ENSG00000059758 CDK17 283500 sc-eQTL 6.44e-01 0.0297 0.0642 0.335 Treg L2
ENSG00000111144 LTA4H 640460 sc-eQTL 3.23e-01 0.0804 0.0811 0.335 Treg L2
ENSG00000111145 ELK3 489605 sc-eQTL 5.33e-01 -0.046 0.0736 0.335 Treg L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.16e-01 -0.0695 0.0852 0.335 Treg L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 5.38e-01 -0.0587 0.0952 0.335 Treg L2
ENSG00000059758 CDK17 283500 sc-eQTL 6.14e-01 -0.0405 0.08 0.344 cDC L2
ENSG00000084110 HAL 687615 sc-eQTL 5.57e-01 0.0489 0.0831 0.344 cDC L2
ENSG00000111144 LTA4H 640460 sc-eQTL 3.28e-02 -0.151 0.0704 0.344 cDC L2
ENSG00000111145 ELK3 489605 sc-eQTL 6.81e-01 0.0387 0.0941 0.344 cDC L2
ENSG00000139343 SNRPF 825052 sc-eQTL 6.17e-01 -0.0395 0.0787 0.344 cDC L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.73e-01 0.131 0.0955 0.344 cDC L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 5.08e-01 -0.0537 0.0808 0.344 cDC L2
ENSG00000059758 CDK17 283500 sc-eQTL 5.47e-02 0.132 0.0684 0.335 cMono_IL1B L2
ENSG00000084110 HAL 687615 sc-eQTL 9.59e-01 -0.00386 0.0753 0.335 cMono_IL1B L2
ENSG00000111144 LTA4H 640460 sc-eQTL 1.05e-01 -0.132 0.0808 0.335 cMono_IL1B L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.76e-02 0.107 0.0622 0.335 cMono_IL1B L2
ENSG00000139343 SNRPF 825052 sc-eQTL 5.33e-01 0.0403 0.0646 0.335 cMono_IL1B L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 3.12e-03 0.261 0.0872 0.335 cMono_IL1B L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 3.48e-02 -0.175 0.0822 0.335 cMono_IL1B L2
ENSG00000059758 CDK17 283500 sc-eQTL 4.03e-01 0.0657 0.0784 0.335 cMono_S100A L2
ENSG00000084110 HAL 687615 sc-eQTL 8.63e-01 -0.0153 0.0881 0.335 cMono_S100A L2
ENSG00000111144 LTA4H 640460 sc-eQTL 3.60e-01 -0.0806 0.0878 0.335 cMono_S100A L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.72e-01 0.0115 0.0717 0.335 cMono_S100A L2
ENSG00000139343 SNRPF 825052 sc-eQTL 8.33e-01 0.0149 0.0708 0.335 cMono_S100A L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 9.00e-01 -0.0121 0.0956 0.335 cMono_S100A L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 2.92e-02 -0.195 0.089 0.335 cMono_S100A L2
ENSG00000059758 CDK17 283500 sc-eQTL 9.62e-01 -0.0037 0.0776 0.336 gdT L2
ENSG00000074527 NTN4 892828 sc-eQTL 3.23e-01 -0.0881 0.0888 0.336 gdT L2
ENSG00000111144 LTA4H 640460 sc-eQTL 9.36e-01 0.00931 0.116 0.336 gdT L2
ENSG00000111145 ELK3 489605 sc-eQTL 7.00e-01 0.0415 0.107 0.336 gdT L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.91e-01 -0.0715 0.104 0.336 gdT L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.56e-01 -0.0356 0.114 0.336 gdT L2
ENSG00000188596 CFAP54 194409 sc-eQTL 4.96e-01 -0.0685 0.1 0.336 gdT L2
ENSG00000059758 CDK17 283500 sc-eQTL 4.68e-01 0.064 0.0879 0.338 intMono L2
ENSG00000084110 HAL 687615 sc-eQTL 7.37e-02 -0.159 0.0883 0.338 intMono L2
ENSG00000111144 LTA4H 640460 sc-eQTL 2.01e-01 -0.117 0.091 0.338 intMono L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.60e-01 -0.0144 0.0813 0.338 intMono L2
ENSG00000139343 SNRPF 825052 sc-eQTL 3.35e-01 0.0838 0.0867 0.338 intMono L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.65e-02 0.16 0.0897 0.338 intMono L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 2.46e-01 -0.105 0.0906 0.338 intMono L2
ENSG00000059758 CDK17 283500 sc-eQTL 3.68e-01 -0.063 0.0698 0.344 ncMono L2
ENSG00000084110 HAL 687615 sc-eQTL 6.35e-01 0.0371 0.078 0.344 ncMono L2
ENSG00000111144 LTA4H 640460 sc-eQTL 9.80e-01 -0.00223 0.087 0.344 ncMono L2
ENSG00000111145 ELK3 489605 sc-eQTL 8.22e-01 0.0168 0.0747 0.344 ncMono L2
ENSG00000139343 SNRPF 825052 sc-eQTL 8.72e-01 -0.0123 0.0763 0.344 ncMono L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 8.82e-01 -0.0121 0.081 0.344 ncMono L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 6.09e-01 -0.0474 0.0924 0.344 ncMono L2
ENSG00000059758 CDK17 283500 sc-eQTL 7.33e-01 0.0307 0.0898 0.347 pDC L2
ENSG00000084110 HAL 687615 sc-eQTL 9.87e-01 0.00123 0.0759 0.347 pDC L2
ENSG00000111144 LTA4H 640460 sc-eQTL 1.51e-02 -0.205 0.0833 0.347 pDC L2
ENSG00000111145 ELK3 489605 sc-eQTL 7.08e-01 0.0389 0.104 0.347 pDC L2
ENSG00000139343 SNRPF 825052 sc-eQTL 4.52e-01 -0.0683 0.0905 0.347 pDC L2
ENSG00000139350 NEDD1 -223243 sc-eQTL 1.36e-01 0.149 0.0993 0.347 pDC L2
ENSG00000257715 AC007298.1 658657 sc-eQTL 2.66e-01 -0.0954 0.0854 0.347 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 283500 sc-eQTL 7.29e-01 -0.0214 0.0616 0.335 B_Memory LOneK1K
ENSG00000111144 LTA4H 640460 sc-eQTL 5.86e-01 -0.0349 0.064 0.335 B_Memory LOneK1K
ENSG00000111145 ELK3 489605 sc-eQTL 4.48e-01 0.0556 0.0731 0.335 B_Memory LOneK1K
ENSG00000139343 SNRPF 825052 sc-eQTL 8.50e-01 0.0134 0.0709 0.335 B_Memory LOneK1K
ENSG00000139350 NEDD1 -223243 sc-eQTL 4.56e-01 -0.0693 0.0929 0.335 B_Memory LOneK1K
ENSG00000059758 CDK17 283500 sc-eQTL 1.78e-01 -0.0713 0.0528 0.335 B_Naive LOneK1K
ENSG00000111144 LTA4H 640460 sc-eQTL 1.15e-01 -0.0936 0.0592 0.335 B_Naive LOneK1K
ENSG00000111145 ELK3 489605 sc-eQTL 7.65e-01 0.0203 0.0678 0.335 B_Naive LOneK1K
ENSG00000139343 SNRPF 825052 sc-eQTL 9.06e-01 -0.00807 0.0683 0.335 B_Naive LOneK1K
ENSG00000139350 NEDD1 -223243 sc-eQTL 7.24e-02 0.162 0.0896 0.335 B_Naive LOneK1K
ENSG00000059758 CDK17 283500 sc-eQTL 6.83e-02 0.113 0.0619 0.335 CD14_Mono LOneK1K
ENSG00000084110 HAL 687615 sc-eQTL 8.65e-01 0.0128 0.0756 0.335 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 640460 sc-eQTL 1.27e-01 -0.126 0.0825 0.335 CD14_Mono LOneK1K
ENSG00000111145 ELK3 489605 sc-eQTL 3.83e-01 0.0523 0.0598 0.335 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 825052 sc-eQTL 4.72e-01 0.0416 0.0578 0.335 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -223243 sc-eQTL 8.19e-02 0.157 0.0901 0.335 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 658657 sc-eQTL 1.33e-02 -0.207 0.0828 0.335 CD14_Mono LOneK1K
ENSG00000059758 CDK17 283500 sc-eQTL 9.29e-01 0.00576 0.0647 0.334 CD16_Mono LOneK1K
ENSG00000084110 HAL 687615 sc-eQTL 6.47e-01 -0.0351 0.0764 0.334 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 640460 sc-eQTL 3.51e-01 -0.079 0.0846 0.334 CD16_Mono LOneK1K
ENSG00000111145 ELK3 489605 sc-eQTL 6.91e-01 0.025 0.0627 0.334 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 825052 sc-eQTL 3.45e-01 0.0611 0.0645 0.334 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -223243 sc-eQTL 3.47e-01 0.078 0.0827 0.334 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 658657 sc-eQTL 7.81e-01 -0.0244 0.0878 0.334 CD16_Mono LOneK1K
ENSG00000059758 CDK17 283500 sc-eQTL 1.51e-01 -0.0659 0.0457 0.332 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 640460 sc-eQTL 4.13e-02 0.162 0.079 0.332 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 489605 sc-eQTL 6.51e-01 0.0331 0.073 0.332 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 825052 sc-eQTL 8.55e-01 0.0115 0.0625 0.332 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -223243 sc-eQTL 9.17e-01 -0.00817 0.078 0.332 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -223243 eQTL 9.33e-12 0.163 0.0236 0.0 0.0 0.325
ENSG00000188596 CFAP54 194405 eQTL 0.00191 0.0625 0.0201 0.0 0.0 0.325

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -223243 1.97e-06 2.37e-06 4.43e-07 1.54e-06 4.89e-07 7.71e-07 1.31e-06 7.94e-07 1.85e-06 8.92e-07 1.99e-06 1.34e-06 3.27e-06 9.45e-07 5.7e-07 1.65e-06 9.79e-07 1.99e-06 1.29e-06 1.26e-06 1.16e-06 2.8e-06 2.16e-06 1.01e-06 2.68e-06 1.03e-06 1.33e-06 1.34e-06 1.98e-06 1.66e-06 1.16e-06 3.8e-07 5.72e-07 1.27e-06 9.18e-07 1.01e-06 8.57e-07 4.13e-07 1.14e-06 3.79e-07 2.38e-07 2.77e-06 4.58e-07 2.07e-07 3.52e-07 3.35e-07 8.29e-07 2.22e-07 1.77e-07
ENSG00000188596 CFAP54 194405 2.65e-06 2.49e-06 6.25e-07 1.76e-06 7.91e-07 7.88e-07 2.07e-06 1.01e-06 2.38e-06 1.24e-06 2.51e-06 1.63e-06 3.54e-06 1.38e-06 9.11e-07 2e-06 1.58e-06 2.19e-06 1.49e-06 1.2e-06 1.5e-06 3.2e-06 2.71e-06 1.64e-06 3.59e-06 1.24e-06 1.53e-06 1.79e-06 2.76e-06 2e-06 1.86e-06 4.91e-07 6.23e-07 1.83e-06 1.31e-06 8.67e-07 9.82e-07 3.77e-07 1.31e-06 3.47e-07 4.4e-07 3.42e-06 5.97e-07 1.95e-07 4.01e-07 3.61e-07 8.3e-07 2.38e-07 3.24e-07