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Genes within 1Mb (chr12:96669579:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 269099 sc-eQTL 2.81e-01 0.0479 0.0443 0.596 B L1
ENSG00000111144 LTA4H 626059 sc-eQTL 1.77e-01 0.0745 0.055 0.596 B L1
ENSG00000111145 ELK3 475204 sc-eQTL 6.64e-01 0.0255 0.0588 0.596 B L1
ENSG00000139343 SNRPF 810651 sc-eQTL 8.50e-01 0.0101 0.0534 0.596 B L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 2.73e-01 -0.0855 0.0777 0.596 B L1
ENSG00000059758 CDK17 269099 sc-eQTL 8.85e-01 0.00529 0.0366 0.596 CD4T L1
ENSG00000111144 LTA4H 626059 sc-eQTL 6.11e-01 -0.0256 0.0503 0.596 CD4T L1
ENSG00000111145 ELK3 475204 sc-eQTL 6.29e-01 -0.0264 0.0545 0.596 CD4T L1
ENSG00000139343 SNRPF 810651 sc-eQTL 3.86e-01 -0.0413 0.0475 0.596 CD4T L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 1.65e-01 -0.0813 0.0584 0.596 CD4T L1
ENSG00000059758 CDK17 269099 sc-eQTL 1.48e-01 -0.0547 0.0377 0.596 CD8T L1
ENSG00000111144 LTA4H 626059 sc-eQTL 9.72e-01 -0.00145 0.0406 0.596 CD8T L1
ENSG00000111145 ELK3 475204 sc-eQTL 3.26e-01 -0.06 0.061 0.596 CD8T L1
ENSG00000139343 SNRPF 810651 sc-eQTL 7.46e-01 0.0163 0.0501 0.596 CD8T L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 3.38e-01 -0.0639 0.0665 0.596 CD8T L1
ENSG00000059758 CDK17 269099 sc-eQTL 8.53e-01 -0.0131 0.071 0.592 DC L1
ENSG00000084110 HAL 673214 sc-eQTL 4.87e-01 -0.0562 0.0807 0.592 DC L1
ENSG00000111144 LTA4H 626059 sc-eQTL 3.68e-02 0.137 0.0654 0.592 DC L1
ENSG00000111145 ELK3 475204 sc-eQTL 7.72e-01 -0.0234 0.0809 0.592 DC L1
ENSG00000139343 SNRPF 810651 sc-eQTL 4.55e-01 0.0503 0.0672 0.592 DC L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 1.97e-01 -0.111 0.086 0.592 DC L1
ENSG00000257715 AC007298.1 644256 sc-eQTL 1.37e-01 -0.116 0.0776 0.592 DC L1
ENSG00000059758 CDK17 269099 sc-eQTL 7.53e-01 -0.0179 0.0567 0.596 Mono L1
ENSG00000084110 HAL 673214 sc-eQTL 7.73e-01 0.0207 0.0715 0.596 Mono L1
ENSG00000111144 LTA4H 626059 sc-eQTL 1.01e-01 0.132 0.0802 0.596 Mono L1
ENSG00000111145 ELK3 475204 sc-eQTL 7.09e-01 -0.0202 0.0542 0.596 Mono L1
ENSG00000139343 SNRPF 810651 sc-eQTL 3.06e-01 -0.0523 0.051 0.596 Mono L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 7.85e-02 -0.138 0.0779 0.596 Mono L1
ENSG00000257715 AC007298.1 644256 sc-eQTL 2.97e-02 0.165 0.0752 0.596 Mono L1
ENSG00000059758 CDK17 269099 sc-eQTL 5.17e-02 0.0822 0.042 0.597 NK L1
ENSG00000111144 LTA4H 626059 sc-eQTL 2.65e-01 -0.0802 0.0717 0.597 NK L1
ENSG00000111145 ELK3 475204 sc-eQTL 6.39e-01 0.0321 0.0682 0.597 NK L1
ENSG00000139343 SNRPF 810651 sc-eQTL 6.42e-01 0.0264 0.0566 0.597 NK L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.35e-01 0.00583 0.0716 0.597 NK L1
ENSG00000059758 CDK17 269099 sc-eQTL 2.80e-01 0.0383 0.0354 0.596 Other_T L1
ENSG00000074527 NTN4 878427 sc-eQTL 5.15e-01 -0.0428 0.0656 0.596 Other_T L1
ENSG00000111144 LTA4H 626059 sc-eQTL 3.04e-02 -0.16 0.0734 0.596 Other_T L1
ENSG00000111145 ELK3 475204 sc-eQTL 3.81e-01 -0.0508 0.0578 0.596 Other_T L1
ENSG00000139343 SNRPF 810651 sc-eQTL 6.51e-01 0.0244 0.0538 0.596 Other_T L1
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.36e-01 -0.0508 0.0819 0.596 Other_T L1
ENSG00000188596 CFAP54 180008 sc-eQTL 8.11e-01 -0.0203 0.0849 0.596 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 269099 sc-eQTL 9.91e-01 0.000956 0.0839 0.582 B_Activated L2
ENSG00000111144 LTA4H 626059 sc-eQTL 8.06e-01 -0.0234 0.095 0.582 B_Activated L2
ENSG00000111145 ELK3 475204 sc-eQTL 9.93e-01 -0.000891 0.101 0.582 B_Activated L2
ENSG00000139343 SNRPF 810651 sc-eQTL 8.62e-01 0.0165 0.0948 0.582 B_Activated L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.36e-01 -0.0615 0.0991 0.582 B_Activated L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.96e-01 0.0485 0.0711 0.594 B_Intermediate L2
ENSG00000111144 LTA4H 626059 sc-eQTL 6.27e-01 0.0336 0.0689 0.594 B_Intermediate L2
ENSG00000111145 ELK3 475204 sc-eQTL 2.49e-01 -0.0897 0.0775 0.594 B_Intermediate L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.71e-01 0.0693 0.0773 0.594 B_Intermediate L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.13e-01 -0.00988 0.0907 0.594 B_Intermediate L2
ENSG00000059758 CDK17 269099 sc-eQTL 5.93e-01 -0.0368 0.0688 0.599 B_Memory L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.58e-01 -0.0245 0.0794 0.599 B_Memory L2
ENSG00000111145 ELK3 475204 sc-eQTL 4.49e-01 0.0591 0.078 0.599 B_Memory L2
ENSG00000139343 SNRPF 810651 sc-eQTL 4.58e-01 -0.0615 0.0826 0.599 B_Memory L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 1.04e-01 0.149 0.091 0.599 B_Memory L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.19e-01 0.0451 0.0558 0.596 B_Naive1 L2
ENSG00000111144 LTA4H 626059 sc-eQTL 4.27e-01 0.0465 0.0584 0.596 B_Naive1 L2
ENSG00000111145 ELK3 475204 sc-eQTL 2.80e-01 0.0747 0.0689 0.596 B_Naive1 L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.59e-01 0.0618 0.0671 0.596 B_Naive1 L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 4.03e-01 -0.0721 0.0861 0.596 B_Naive1 L2
ENSG00000059758 CDK17 269099 sc-eQTL 2.81e-01 0.0775 0.0717 0.597 B_Naive2 L2
ENSG00000111144 LTA4H 626059 sc-eQTL 2.97e-01 0.0711 0.068 0.597 B_Naive2 L2
ENSG00000111145 ELK3 475204 sc-eQTL 7.10e-01 -0.03 0.0804 0.597 B_Naive2 L2
ENSG00000139343 SNRPF 810651 sc-eQTL 6.72e-01 0.0338 0.0798 0.597 B_Naive2 L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 6.77e-01 -0.0396 0.0949 0.597 B_Naive2 L2
ENSG00000059758 CDK17 269099 sc-eQTL 7.73e-01 -0.0194 0.0671 0.602 CD4_CTL L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.52e-02 -0.168 0.0939 0.602 CD4_CTL L2
ENSG00000111145 ELK3 475204 sc-eQTL 9.51e-01 -0.0059 0.0958 0.602 CD4_CTL L2
ENSG00000139343 SNRPF 810651 sc-eQTL 4.07e-01 0.0691 0.0832 0.602 CD4_CTL L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.02e-01 -0.0647 0.0962 0.602 CD4_CTL L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.70e-01 0.0292 0.0403 0.596 CD4_Naive L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.88e-01 -0.0503 0.0582 0.596 CD4_Naive L2
ENSG00000111145 ELK3 475204 sc-eQTL 9.22e-01 -0.00572 0.0583 0.596 CD4_Naive L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.53e-01 -0.0482 0.0517 0.596 CD4_Naive L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 4.30e-02 -0.129 0.0632 0.596 CD4_Naive L2
ENSG00000059758 CDK17 269099 sc-eQTL 5.17e-01 -0.0253 0.039 0.596 CD4_TCM L2
ENSG00000111144 LTA4H 626059 sc-eQTL 5.48e-01 -0.0399 0.0662 0.596 CD4_TCM L2
ENSG00000111145 ELK3 475204 sc-eQTL 7.51e-01 -0.0207 0.0652 0.596 CD4_TCM L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.33e-01 -0.0518 0.0534 0.596 CD4_TCM L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 7.08e-01 0.0274 0.073 0.596 CD4_TCM L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.15e-01 0.0402 0.0492 0.596 CD4_TEM L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.31e-02 0.136 0.0755 0.596 CD4_TEM L2
ENSG00000111145 ELK3 475204 sc-eQTL 9.66e-01 0.00302 0.0707 0.596 CD4_TEM L2
ENSG00000139343 SNRPF 810651 sc-eQTL 1.33e-01 -0.111 0.0736 0.596 CD4_TEM L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 3.43e-02 -0.185 0.0869 0.596 CD4_TEM L2
ENSG00000059758 CDK17 269099 sc-eQTL 5.21e-01 0.0305 0.0475 0.596 CD8_CTL L2
ENSG00000111144 LTA4H 626059 sc-eQTL 6.97e-01 -0.0334 0.0857 0.596 CD8_CTL L2
ENSG00000111145 ELK3 475204 sc-eQTL 4.88e-01 0.0542 0.078 0.596 CD8_CTL L2
ENSG00000139343 SNRPF 810651 sc-eQTL 9.46e-01 0.00491 0.0718 0.596 CD8_CTL L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.32e-01 -0.0504 0.0804 0.596 CD8_CTL L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.06e-01 -0.0474 0.0569 0.596 CD8_Naive L2
ENSG00000111144 LTA4H 626059 sc-eQTL 5.12e-01 0.0448 0.0682 0.596 CD8_Naive L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.28e-02 -0.125 0.0717 0.596 CD8_Naive L2
ENSG00000139343 SNRPF 810651 sc-eQTL 5.49e-02 0.124 0.0644 0.596 CD8_Naive L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 8.72e-01 -0.0124 0.0773 0.596 CD8_Naive L2
ENSG00000059758 CDK17 269099 sc-eQTL 3.36e-01 0.0604 0.0626 0.593 CD8_TCM L2
ENSG00000111144 LTA4H 626059 sc-eQTL 5.37e-01 0.0569 0.0922 0.593 CD8_TCM L2
ENSG00000111145 ELK3 475204 sc-eQTL 4.81e-01 -0.0552 0.078 0.593 CD8_TCM L2
ENSG00000139343 SNRPF 810651 sc-eQTL 7.17e-01 -0.0327 0.09 0.593 CD8_TCM L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.24e-01 -0.0562 0.088 0.593 CD8_TCM L2
ENSG00000059758 CDK17 269099 sc-eQTL 1.93e-01 -0.101 0.0774 0.6 CD8_TEM L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.55e-01 -0.0298 0.0952 0.6 CD8_TEM L2
ENSG00000111145 ELK3 475204 sc-eQTL 7.86e-01 -0.0255 0.0936 0.6 CD8_TEM L2
ENSG00000139343 SNRPF 810651 sc-eQTL 8.80e-01 0.0132 0.087 0.6 CD8_TEM L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 6.43e-01 -0.0438 0.0944 0.6 CD8_TEM L2
ENSG00000059758 CDK17 269099 sc-eQTL 7.12e-01 -0.019 0.0515 0.597 MAIT L2
ENSG00000074527 NTN4 878427 sc-eQTL 6.21e-01 -0.0344 0.0695 0.597 MAIT L2
ENSG00000111144 LTA4H 626059 sc-eQTL 2.35e-01 -0.0946 0.0794 0.597 MAIT L2
ENSG00000111145 ELK3 475204 sc-eQTL 4.64e-01 -0.049 0.0668 0.597 MAIT L2
ENSG00000139343 SNRPF 810651 sc-eQTL 7.58e-01 -0.0239 0.0774 0.597 MAIT L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 2.49e-01 -0.1 0.0867 0.597 MAIT L2
ENSG00000188596 CFAP54 180008 sc-eQTL 5.20e-01 -0.0555 0.0861 0.597 MAIT L2
ENSG00000059758 CDK17 269099 sc-eQTL 1.39e-02 0.132 0.0532 0.6 NK_CD56bright L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.47e-01 0.0258 0.0799 0.6 NK_CD56bright L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.33e-01 0.0179 0.0848 0.6 NK_CD56bright L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.07e-02 0.191 0.0877 0.6 NK_CD56bright L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 4.34e-01 0.07 0.0894 0.6 NK_CD56bright L2
ENSG00000059758 CDK17 269099 sc-eQTL 2.38e-02 0.102 0.0449 0.599 NK_CD56dim L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.45e-01 -0.0777 0.082 0.599 NK_CD56dim L2
ENSG00000111145 ELK3 475204 sc-eQTL 7.93e-01 0.0192 0.0727 0.599 NK_CD56dim L2
ENSG00000139343 SNRPF 810651 sc-eQTL 4.07e-01 -0.0574 0.0691 0.599 NK_CD56dim L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.92e-01 -0.0428 0.0797 0.599 NK_CD56dim L2
ENSG00000059758 CDK17 269099 sc-eQTL 8.09e-01 0.0171 0.0706 0.6 NK_HLA L2
ENSG00000111144 LTA4H 626059 sc-eQTL 7.90e-02 -0.162 0.0918 0.6 NK_HLA L2
ENSG00000111145 ELK3 475204 sc-eQTL 1.35e-01 0.128 0.0854 0.6 NK_HLA L2
ENSG00000139343 SNRPF 810651 sc-eQTL 2.54e-02 0.199 0.0883 0.6 NK_HLA L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.41e-01 -0.0518 0.0846 0.6 NK_HLA L2
ENSG00000059758 CDK17 269099 sc-eQTL 3.15e-01 0.05 0.0496 0.599 NK_cytokine L2
ENSG00000111144 LTA4H 626059 sc-eQTL 8.53e-01 -0.0156 0.0841 0.599 NK_cytokine L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.23e-01 -0.018 0.0805 0.599 NK_cytokine L2
ENSG00000139343 SNRPF 810651 sc-eQTL 2.37e-01 0.0806 0.068 0.599 NK_cytokine L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 2.74e-01 0.0922 0.0841 0.599 NK_cytokine L2
ENSG00000059758 CDK17 269099 sc-eQTL 3.62e-01 -0.0919 0.1 0.593 PB L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.15e-01 -0.0893 0.0885 0.593 PB L2
ENSG00000111145 ELK3 475204 sc-eQTL 3.88e-01 0.0984 0.114 0.593 PB L2
ENSG00000139343 SNRPF 810651 sc-eQTL 7.61e-01 -0.0339 0.111 0.593 PB L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 8.55e-01 -0.0241 0.132 0.593 PB L2
ENSG00000059758 CDK17 269099 sc-eQTL 6.67e-01 -0.0239 0.0554 0.593 Pro_T L2
ENSG00000074527 NTN4 878427 sc-eQTL 2.45e-01 -0.0723 0.0621 0.593 Pro_T L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.38e-01 -0.0702 0.073 0.593 Pro_T L2
ENSG00000111145 ELK3 475204 sc-eQTL 3.49e-01 -0.083 0.0884 0.593 Pro_T L2
ENSG00000139343 SNRPF 810651 sc-eQTL 9.32e-01 -0.00476 0.0558 0.593 Pro_T L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 3.32e-01 0.0787 0.0809 0.593 Pro_T L2
ENSG00000188596 CFAP54 180008 sc-eQTL 8.06e-01 -0.0162 0.0656 0.593 Pro_T L2
ENSG00000059758 CDK17 269099 sc-eQTL 2.66e-01 -0.0677 0.0607 0.596 Treg L2
ENSG00000111144 LTA4H 626059 sc-eQTL 1.99e-01 -0.099 0.0769 0.596 Treg L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.83e-01 0.0103 0.0699 0.596 Treg L2
ENSG00000139343 SNRPF 810651 sc-eQTL 3.90e-01 0.0696 0.0808 0.596 Treg L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.47e-02 0.151 0.0897 0.596 Treg L2
ENSG00000059758 CDK17 269099 sc-eQTL 6.87e-01 0.0313 0.0776 0.59 cDC L2
ENSG00000084110 HAL 673214 sc-eQTL 2.89e-01 -0.0855 0.0804 0.59 cDC L2
ENSG00000111144 LTA4H 626059 sc-eQTL 2.04e-03 0.211 0.0673 0.59 cDC L2
ENSG00000111145 ELK3 475204 sc-eQTL 5.02e-01 -0.0614 0.0911 0.59 cDC L2
ENSG00000139343 SNRPF 810651 sc-eQTL 5.93e-01 0.0409 0.0763 0.59 cDC L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 2.43e-01 -0.109 0.0927 0.59 cDC L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 8.50e-01 0.0149 0.0785 0.59 cDC L2
ENSG00000059758 CDK17 269099 sc-eQTL 1.60e-01 -0.0918 0.0652 0.596 cMono_IL1B L2
ENSG00000084110 HAL 673214 sc-eQTL 2.94e-01 0.0749 0.0712 0.596 cMono_IL1B L2
ENSG00000111144 LTA4H 626059 sc-eQTL 9.76e-02 0.128 0.0766 0.596 cMono_IL1B L2
ENSG00000111145 ELK3 475204 sc-eQTL 2.73e-01 -0.0652 0.0593 0.596 cMono_IL1B L2
ENSG00000139343 SNRPF 810651 sc-eQTL 4.50e-01 -0.0464 0.0612 0.596 cMono_IL1B L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.45e-03 -0.218 0.0831 0.596 cMono_IL1B L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 3.53e-02 0.165 0.078 0.596 cMono_IL1B L2
ENSG00000059758 CDK17 269099 sc-eQTL 7.88e-01 -0.02 0.0742 0.596 cMono_S100A L2
ENSG00000084110 HAL 673214 sc-eQTL 9.02e-01 -0.0102 0.0833 0.596 cMono_S100A L2
ENSG00000111144 LTA4H 626059 sc-eQTL 1.97e-01 0.107 0.0829 0.596 cMono_S100A L2
ENSG00000111145 ELK3 475204 sc-eQTL 9.95e-01 -0.000465 0.0678 0.596 cMono_S100A L2
ENSG00000139343 SNRPF 810651 sc-eQTL 7.34e-01 0.0228 0.067 0.596 cMono_S100A L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 7.04e-01 -0.0344 0.0904 0.596 cMono_S100A L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 3.11e-02 0.183 0.0842 0.596 cMono_S100A L2
ENSG00000059758 CDK17 269099 sc-eQTL 8.50e-01 0.0139 0.0733 0.594 gdT L2
ENSG00000074527 NTN4 878427 sc-eQTL 6.72e-01 0.0356 0.0841 0.594 gdT L2
ENSG00000111144 LTA4H 626059 sc-eQTL 1.59e-01 -0.154 0.109 0.594 gdT L2
ENSG00000111145 ELK3 475204 sc-eQTL 6.20e-01 0.0504 0.101 0.594 gdT L2
ENSG00000139343 SNRPF 810651 sc-eQTL 2.81e-01 0.106 0.0976 0.594 gdT L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.37e-01 0.0668 0.108 0.594 gdT L2
ENSG00000188596 CFAP54 180008 sc-eQTL 4.43e-01 0.0728 0.0946 0.594 gdT L2
ENSG00000059758 CDK17 269099 sc-eQTL 2.81e-01 -0.0897 0.0831 0.593 intMono L2
ENSG00000084110 HAL 673214 sc-eQTL 3.65e-01 0.0764 0.0841 0.593 intMono L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.73e-01 0.0769 0.0862 0.593 intMono L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.59e-01 0.0137 0.0769 0.593 intMono L2
ENSG00000139343 SNRPF 810651 sc-eQTL 1.19e-01 -0.128 0.0818 0.593 intMono L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 7.09e-02 -0.154 0.0848 0.593 intMono L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 3.25e-01 0.0846 0.0858 0.593 intMono L2
ENSG00000059758 CDK17 269099 sc-eQTL 4.28e-01 0.0527 0.0663 0.584 ncMono L2
ENSG00000084110 HAL 673214 sc-eQTL 5.27e-01 -0.0469 0.074 0.584 ncMono L2
ENSG00000111144 LTA4H 626059 sc-eQTL 9.89e-01 -0.00109 0.0826 0.584 ncMono L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.90e-01 -0.00982 0.0709 0.584 ncMono L2
ENSG00000139343 SNRPF 810651 sc-eQTL 2.70e-01 -0.08 0.0722 0.584 ncMono L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.37e-01 0.00612 0.0769 0.584 ncMono L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 9.47e-01 0.00585 0.0878 0.584 ncMono L2
ENSG00000059758 CDK17 269099 sc-eQTL 5.13e-01 -0.0569 0.0867 0.579 pDC L2
ENSG00000084110 HAL 673214 sc-eQTL 6.93e-01 0.029 0.0733 0.579 pDC L2
ENSG00000111144 LTA4H 626059 sc-eQTL 3.06e-02 0.176 0.0809 0.579 pDC L2
ENSG00000111145 ELK3 475204 sc-eQTL 8.98e-01 0.0129 0.1 0.579 pDC L2
ENSG00000139343 SNRPF 810651 sc-eQTL 5.05e-01 0.0585 0.0875 0.579 pDC L2
ENSG00000139350 NEDD1 -237644 sc-eQTL 6.96e-01 -0.0378 0.0966 0.579 pDC L2
ENSG00000257715 AC007298.1 644256 sc-eQTL 9.66e-01 -0.00358 0.0829 0.579 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 269099 sc-eQTL 7.16e-01 0.0215 0.059 0.596 B_Memory LOneK1K
ENSG00000111144 LTA4H 626059 sc-eQTL 6.49e-01 0.0279 0.0613 0.596 B_Memory LOneK1K
ENSG00000111145 ELK3 475204 sc-eQTL 7.06e-01 -0.0265 0.0701 0.596 B_Memory LOneK1K
ENSG00000139343 SNRPF 810651 sc-eQTL 8.20e-01 0.0155 0.0679 0.596 B_Memory LOneK1K
ENSG00000139350 NEDD1 -237644 sc-eQTL 5.15e-01 0.0581 0.089 0.596 B_Memory LOneK1K
ENSG00000059758 CDK17 269099 sc-eQTL 1.57e-01 0.071 0.05 0.596 B_Naive LOneK1K
ENSG00000111144 LTA4H 626059 sc-eQTL 9.78e-02 0.0932 0.0561 0.596 B_Naive LOneK1K
ENSG00000111145 ELK3 475204 sc-eQTL 8.73e-01 0.0103 0.0642 0.596 B_Naive LOneK1K
ENSG00000139343 SNRPF 810651 sc-eQTL 7.87e-01 0.0175 0.0647 0.596 B_Naive LOneK1K
ENSG00000139350 NEDD1 -237644 sc-eQTL 3.62e-01 -0.0781 0.0854 0.596 B_Naive LOneK1K
ENSG00000059758 CDK17 269099 sc-eQTL 2.32e-01 -0.0705 0.0588 0.596 CD14_Mono LOneK1K
ENSG00000084110 HAL 673214 sc-eQTL 7.63e-01 0.0215 0.0714 0.596 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 626059 sc-eQTL 8.13e-02 0.136 0.0779 0.596 CD14_Mono LOneK1K
ENSG00000111145 ELK3 475204 sc-eQTL 6.21e-01 -0.028 0.0566 0.596 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 810651 sc-eQTL 5.90e-01 -0.0295 0.0546 0.596 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -237644 sc-eQTL 7.27e-02 -0.153 0.0851 0.596 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 644256 sc-eQTL 1.32e-02 0.196 0.0783 0.596 CD14_Mono LOneK1K
ENSG00000059758 CDK17 269099 sc-eQTL 8.61e-01 -0.0107 0.0609 0.597 CD16_Mono LOneK1K
ENSG00000084110 HAL 673214 sc-eQTL 9.50e-01 0.00448 0.0719 0.597 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 626059 sc-eQTL 4.19e-01 0.0645 0.0796 0.597 CD16_Mono LOneK1K
ENSG00000111145 ELK3 475204 sc-eQTL 7.11e-01 -0.0219 0.059 0.597 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 810651 sc-eQTL 5.69e-02 -0.116 0.0603 0.597 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -237644 sc-eQTL 3.84e-01 -0.0679 0.0779 0.597 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 644256 sc-eQTL 8.44e-01 -0.0162 0.0826 0.597 CD16_Mono LOneK1K
ENSG00000059758 CDK17 269099 sc-eQTL 6.30e-02 0.0793 0.0424 0.599 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 626059 sc-eQTL 1.02e-01 -0.121 0.0739 0.599 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 475204 sc-eQTL 6.90e-01 0.0271 0.0681 0.599 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 810651 sc-eQTL 8.35e-01 0.0121 0.0583 0.599 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -237644 sc-eQTL 9.80e-01 0.00179 0.0727 0.599 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -237644 eQTL 9.28e-08 -0.126 0.0234 0.0 0.0 0.392
ENSG00000188596 CFAP54 180004 eQTL 0.000616 -0.0677 0.0197 0.0 0.0 0.392

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -237644 2.66e-06 3.5e-06 7.79e-07 2.95e-06 4.8e-07 1.03e-06 2.53e-06 6.28e-07 1.88e-06 9.12e-07 2.61e-06 1.65e-06 4.79e-06 1.24e-06 8.94e-07 1.52e-06 1.37e-06 2.31e-06 1.42e-06 9.54e-07 7.87e-07 3.19e-06 2.69e-06 1.17e-06 4.53e-06 1.12e-06 1.46e-06 1.75e-06 3.88e-06 3.86e-06 1.94e-06 3.04e-07 5.96e-07 1.42e-06 1.93e-06 7.46e-07 9.24e-07 4.47e-07 1.25e-06 3.98e-07 1.51e-07 3.31e-06 4.37e-07 1.68e-07 4.11e-07 3.43e-07 8.61e-07 2.15e-07 2.41e-07
ENSG00000188596 CFAP54 180004 4.36e-06 5.15e-06 6.64e-07 3.69e-06 1.2e-06 1.54e-06 5.25e-06 9.31e-07 4.57e-06 2.01e-06 5.19e-06 3.52e-06 7.51e-06 1.92e-06 1.29e-06 2.69e-06 1.81e-06 2.88e-06 1.45e-06 1.37e-06 1.9e-06 4.85e-06 4.13e-06 1.62e-06 7.94e-06 1.28e-06 2.57e-06 1.77e-06 5.1e-06 6.39e-06 2.68e-06 5.93e-07 6.12e-07 1.65e-06 1.96e-06 8.35e-07 9.81e-07 4.24e-07 8.5e-07 4.11e-07 3.2e-07 5.47e-06 3.77e-07 1.55e-07 3.45e-07 6.75e-07 9.92e-07 4.4e-07 2.55e-07