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Genes within 1Mb (chr12:96653332:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 252852 sc-eQTL 3.44e-01 0.0782 0.0825 0.925 B L1
ENSG00000111144 LTA4H 609812 sc-eQTL 9.04e-01 0.0124 0.103 0.925 B L1
ENSG00000111145 ELK3 458957 sc-eQTL 3.37e-01 0.105 0.109 0.925 B L1
ENSG00000139343 SNRPF 794404 sc-eQTL 8.13e-01 -0.0236 0.0993 0.925 B L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 1.46e-01 0.211 0.144 0.925 B L1
ENSG00000059758 CDK17 252852 sc-eQTL 2.77e-01 -0.0753 0.069 0.925 CD4T L1
ENSG00000111144 LTA4H 609812 sc-eQTL 1.67e-01 0.131 0.0946 0.925 CD4T L1
ENSG00000111145 ELK3 458957 sc-eQTL 2.88e-01 -0.109 0.103 0.925 CD4T L1
ENSG00000139343 SNRPF 794404 sc-eQTL 6.79e-01 -0.0373 0.09 0.925 CD4T L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.07e-01 0.0271 0.111 0.925 CD4T L1
ENSG00000059758 CDK17 252852 sc-eQTL 5.67e-01 0.0402 0.0702 0.925 CD8T L1
ENSG00000111144 LTA4H 609812 sc-eQTL 3.69e-01 -0.0677 0.0753 0.925 CD8T L1
ENSG00000111145 ELK3 458957 sc-eQTL 6.98e-01 0.0441 0.113 0.925 CD8T L1
ENSG00000139343 SNRPF 794404 sc-eQTL 8.15e-01 -0.0217 0.093 0.925 CD8T L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.35e-01 0.042 0.124 0.925 CD8T L1
ENSG00000059758 CDK17 252852 sc-eQTL 2.54e-01 -0.146 0.128 0.926 DC L1
ENSG00000084110 HAL 656967 sc-eQTL 4.56e-01 0.109 0.145 0.926 DC L1
ENSG00000111144 LTA4H 609812 sc-eQTL 5.61e-01 0.0693 0.119 0.926 DC L1
ENSG00000111145 ELK3 458957 sc-eQTL 1.14e-01 0.23 0.145 0.926 DC L1
ENSG00000139343 SNRPF 794404 sc-eQTL 5.63e-01 -0.0703 0.121 0.926 DC L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 5.31e-01 -0.0978 0.156 0.926 DC L1
ENSG00000257715 AC007298.1 628009 sc-eQTL 9.25e-01 -0.0133 0.141 0.926 DC L1
ENSG00000059758 CDK17 252852 sc-eQTL 4.61e-01 -0.0777 0.105 0.925 Mono L1
ENSG00000084110 HAL 656967 sc-eQTL 8.74e-01 0.0211 0.133 0.925 Mono L1
ENSG00000111144 LTA4H 609812 sc-eQTL 9.65e-01 0.00667 0.15 0.925 Mono L1
ENSG00000111145 ELK3 458957 sc-eQTL 7.12e-01 0.0372 0.101 0.925 Mono L1
ENSG00000139343 SNRPF 794404 sc-eQTL 6.05e-01 -0.0491 0.0948 0.925 Mono L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 6.86e-01 0.0589 0.146 0.925 Mono L1
ENSG00000257715 AC007298.1 628009 sc-eQTL 2.64e-01 -0.157 0.141 0.925 Mono L1
ENSG00000059758 CDK17 252852 sc-eQTL 1.30e-01 -0.119 0.0779 0.925 NK L1
ENSG00000111144 LTA4H 609812 sc-eQTL 6.55e-01 0.0594 0.133 0.925 NK L1
ENSG00000111145 ELK3 458957 sc-eQTL 6.90e-01 0.0504 0.126 0.925 NK L1
ENSG00000139343 SNRPF 794404 sc-eQTL 7.01e-01 -0.0402 0.105 0.925 NK L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.71e-01 -0.0215 0.132 0.925 NK L1
ENSG00000059758 CDK17 252852 sc-eQTL 4.95e-01 -0.0444 0.0649 0.925 Other_T L1
ENSG00000074527 NTN4 862180 sc-eQTL 9.28e-01 -0.0109 0.12 0.925 Other_T L1
ENSG00000111144 LTA4H 609812 sc-eQTL 5.98e-02 0.255 0.135 0.925 Other_T L1
ENSG00000111145 ELK3 458957 sc-eQTL 8.29e-01 -0.023 0.106 0.925 Other_T L1
ENSG00000139343 SNRPF 794404 sc-eQTL 1.19e-01 -0.153 0.098 0.925 Other_T L1
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.48e-01 -0.141 0.15 0.925 Other_T L1
ENSG00000188596 CFAP54 163761 sc-eQTL 1.58e-02 0.373 0.153 0.925 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 252852 sc-eQTL 4.84e-01 -0.104 0.148 0.923 B_Activated L2
ENSG00000111144 LTA4H 609812 sc-eQTL 6.09e-01 0.0856 0.167 0.923 B_Activated L2
ENSG00000111145 ELK3 458957 sc-eQTL 3.70e-01 0.159 0.177 0.923 B_Activated L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.88e-01 -0.144 0.167 0.923 B_Activated L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 2.57e-01 -0.198 0.174 0.923 B_Activated L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.80e-01 0.111 0.126 0.925 B_Intermediate L2
ENSG00000111144 LTA4H 609812 sc-eQTL 4.12e-01 0.101 0.122 0.925 B_Intermediate L2
ENSG00000111145 ELK3 458957 sc-eQTL 8.95e-01 -0.0184 0.138 0.925 B_Intermediate L2
ENSG00000139343 SNRPF 794404 sc-eQTL 7.58e-01 0.0424 0.138 0.925 B_Intermediate L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.48e-01 0.0309 0.161 0.925 B_Intermediate L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.94e-01 -0.0654 0.123 0.925 B_Memory L2
ENSG00000111144 LTA4H 609812 sc-eQTL 3.13e-01 0.143 0.141 0.925 B_Memory L2
ENSG00000111145 ELK3 458957 sc-eQTL 4.19e-01 0.113 0.139 0.925 B_Memory L2
ENSG00000139343 SNRPF 794404 sc-eQTL 4.90e-01 -0.102 0.147 0.925 B_Memory L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.29e-01 -0.0567 0.163 0.925 B_Memory L2
ENSG00000059758 CDK17 252852 sc-eQTL 8.61e-01 0.018 0.103 0.925 B_Naive1 L2
ENSG00000111144 LTA4H 609812 sc-eQTL 9.28e-01 -0.00978 0.107 0.925 B_Naive1 L2
ENSG00000111145 ELK3 458957 sc-eQTL 2.64e-01 0.142 0.127 0.925 B_Naive1 L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.89e-01 -0.106 0.123 0.925 B_Naive1 L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.43e-02 0.334 0.157 0.925 B_Naive1 L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.74e-01 0.0542 0.128 0.925 B_Naive2 L2
ENSG00000111144 LTA4H 609812 sc-eQTL 4.02e-01 0.102 0.122 0.925 B_Naive2 L2
ENSG00000111145 ELK3 458957 sc-eQTL 2.45e-01 0.167 0.143 0.925 B_Naive2 L2
ENSG00000139343 SNRPF 794404 sc-eQTL 6.43e-01 -0.0661 0.142 0.925 B_Naive2 L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.20e-01 -0.0607 0.169 0.925 B_Naive2 L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.23e-01 0.0767 0.12 0.923 CD4_CTL L2
ENSG00000111144 LTA4H 609812 sc-eQTL 2.62e-02 0.374 0.167 0.923 CD4_CTL L2
ENSG00000111145 ELK3 458957 sc-eQTL 3.22e-01 -0.169 0.171 0.923 CD4_CTL L2
ENSG00000139343 SNRPF 794404 sc-eQTL 7.57e-01 -0.0462 0.149 0.923 CD4_CTL L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.33e-01 -0.167 0.172 0.923 CD4_CTL L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.18e-01 -0.0753 0.0752 0.925 CD4_Naive L2
ENSG00000111144 LTA4H 609812 sc-eQTL 1.01e-01 0.179 0.108 0.925 CD4_Naive L2
ENSG00000111145 ELK3 458957 sc-eQTL 2.41e-01 -0.128 0.109 0.925 CD4_Naive L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.96e-01 -0.0822 0.0967 0.925 CD4_Naive L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.73e-01 0.106 0.119 0.925 CD4_Naive L2
ENSG00000059758 CDK17 252852 sc-eQTL 9.63e-01 0.00346 0.0736 0.925 CD4_TCM L2
ENSG00000111144 LTA4H 609812 sc-eQTL 8.33e-02 0.216 0.124 0.925 CD4_TCM L2
ENSG00000111145 ELK3 458957 sc-eQTL 3.74e-01 -0.109 0.123 0.925 CD4_TCM L2
ENSG00000139343 SNRPF 794404 sc-eQTL 2.34e-01 0.12 0.1 0.925 CD4_TCM L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.46e-01 0.0267 0.138 0.925 CD4_TCM L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.59e-01 0.0816 0.0887 0.925 CD4_TEM L2
ENSG00000111144 LTA4H 609812 sc-eQTL 1.17e-01 -0.215 0.136 0.925 CD4_TEM L2
ENSG00000111145 ELK3 458957 sc-eQTL 3.03e-01 0.131 0.127 0.925 CD4_TEM L2
ENSG00000139343 SNRPF 794404 sc-eQTL 7.98e-01 0.0341 0.134 0.925 CD4_TEM L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 9.36e-01 0.0128 0.158 0.925 CD4_TEM L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.58e-01 0.0381 0.0861 0.925 CD8_CTL L2
ENSG00000111144 LTA4H 609812 sc-eQTL 6.08e-01 -0.0798 0.156 0.925 CD8_CTL L2
ENSG00000111145 ELK3 458957 sc-eQTL 4.32e-01 0.111 0.141 0.925 CD8_CTL L2
ENSG00000139343 SNRPF 794404 sc-eQTL 6.10e-01 -0.0665 0.13 0.925 CD8_CTL L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.87e-01 0.126 0.146 0.925 CD8_CTL L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.71e-01 -0.0441 0.104 0.925 CD8_Naive L2
ENSG00000111144 LTA4H 609812 sc-eQTL 8.16e-01 -0.0289 0.124 0.925 CD8_Naive L2
ENSG00000111145 ELK3 458957 sc-eQTL 7.42e-01 0.0433 0.132 0.925 CD8_Naive L2
ENSG00000139343 SNRPF 794404 sc-eQTL 1.26e-01 -0.181 0.118 0.925 CD8_Naive L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 9.28e-01 0.0127 0.141 0.925 CD8_Naive L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.13e-01 0.114 0.113 0.924 CD8_TCM L2
ENSG00000111144 LTA4H 609812 sc-eQTL 5.19e-02 0.322 0.165 0.924 CD8_TCM L2
ENSG00000111145 ELK3 458957 sc-eQTL 9.32e-01 0.012 0.141 0.924 CD8_TCM L2
ENSG00000139343 SNRPF 794404 sc-eQTL 2.68e-01 0.179 0.162 0.924 CD8_TCM L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.37e-01 -0.153 0.158 0.924 CD8_TCM L2
ENSG00000059758 CDK17 252852 sc-eQTL 7.18e-02 0.245 0.135 0.92 CD8_TEM L2
ENSG00000111144 LTA4H 609812 sc-eQTL 4.50e-01 0.126 0.167 0.92 CD8_TEM L2
ENSG00000111145 ELK3 458957 sc-eQTL 2.79e-01 0.178 0.164 0.92 CD8_TEM L2
ENSG00000139343 SNRPF 794404 sc-eQTL 6.00e-01 -0.0803 0.153 0.92 CD8_TEM L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.76e-01 -0.026 0.166 0.92 CD8_TEM L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.11e-01 0.0612 0.0928 0.924 MAIT L2
ENSG00000074527 NTN4 862180 sc-eQTL 8.75e-01 0.0198 0.125 0.924 MAIT L2
ENSG00000111144 LTA4H 609812 sc-eQTL 3.90e-01 0.123 0.143 0.924 MAIT L2
ENSG00000111145 ELK3 458957 sc-eQTL 7.67e-01 -0.0358 0.12 0.924 MAIT L2
ENSG00000139343 SNRPF 794404 sc-eQTL 1.01e-02 -0.357 0.137 0.924 MAIT L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.35e-01 -0.0532 0.157 0.924 MAIT L2
ENSG00000188596 CFAP54 163761 sc-eQTL 1.24e-01 0.239 0.154 0.924 MAIT L2
ENSG00000059758 CDK17 252852 sc-eQTL 1.88e-01 0.129 0.0977 0.924 NK_CD56bright L2
ENSG00000111144 LTA4H 609812 sc-eQTL 7.27e-01 -0.0507 0.145 0.924 NK_CD56bright L2
ENSG00000111145 ELK3 458957 sc-eQTL 9.09e-01 0.0176 0.154 0.924 NK_CD56bright L2
ENSG00000139343 SNRPF 794404 sc-eQTL 1.63e-01 -0.225 0.16 0.924 NK_CD56bright L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 3.70e-01 -0.146 0.162 0.924 NK_CD56bright L2
ENSG00000059758 CDK17 252852 sc-eQTL 2.18e-01 -0.104 0.0839 0.925 NK_CD56dim L2
ENSG00000111144 LTA4H 609812 sc-eQTL 8.05e-01 -0.0375 0.152 0.925 NK_CD56dim L2
ENSG00000111145 ELK3 458957 sc-eQTL 9.71e-01 -0.00486 0.135 0.925 NK_CD56dim L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.35e-01 -0.124 0.128 0.925 NK_CD56dim L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 4.31e-01 -0.116 0.147 0.925 NK_CD56dim L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.54e-02 -0.245 0.132 0.929 NK_HLA L2
ENSG00000111144 LTA4H 609812 sc-eQTL 1.09e-01 0.279 0.173 0.929 NK_HLA L2
ENSG00000111145 ELK3 458957 sc-eQTL 8.83e-01 0.0238 0.162 0.929 NK_HLA L2
ENSG00000139343 SNRPF 794404 sc-eQTL 6.40e-01 -0.079 0.169 0.929 NK_HLA L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 2.12e-01 0.199 0.159 0.929 NK_HLA L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.23e-01 -0.0453 0.092 0.925 NK_cytokine L2
ENSG00000111144 LTA4H 609812 sc-eQTL 9.46e-01 0.0105 0.156 0.925 NK_cytokine L2
ENSG00000111145 ELK3 458957 sc-eQTL 9.84e-01 -0.00297 0.149 0.925 NK_cytokine L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.24e-01 -0.125 0.126 0.925 NK_cytokine L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 5.72e-01 0.0881 0.156 0.925 NK_cytokine L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.74e-01 0.0716 0.17 0.926 PB L2
ENSG00000111144 LTA4H 609812 sc-eQTL 3.70e-01 0.135 0.15 0.926 PB L2
ENSG00000111145 ELK3 458957 sc-eQTL 1.57e-01 0.271 0.191 0.926 PB L2
ENSG00000139343 SNRPF 794404 sc-eQTL 9.95e-01 0.0012 0.188 0.926 PB L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 6.40e-01 -0.105 0.223 0.926 PB L2
ENSG00000059758 CDK17 252852 sc-eQTL 4.56e-01 0.0773 0.103 0.924 Pro_T L2
ENSG00000074527 NTN4 862180 sc-eQTL 1.38e-01 0.172 0.116 0.924 Pro_T L2
ENSG00000111144 LTA4H 609812 sc-eQTL 7.92e-02 0.239 0.136 0.924 Pro_T L2
ENSG00000111145 ELK3 458957 sc-eQTL 3.00e-01 -0.171 0.165 0.924 Pro_T L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.99e-01 0.0881 0.104 0.924 Pro_T L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.24e-01 -0.0535 0.151 0.924 Pro_T L2
ENSG00000188596 CFAP54 163761 sc-eQTL 6.12e-02 0.229 0.121 0.924 Pro_T L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.09e-01 -0.0739 0.112 0.925 Treg L2
ENSG00000111144 LTA4H 609812 sc-eQTL 1.20e-01 0.22 0.141 0.925 Treg L2
ENSG00000111145 ELK3 458957 sc-eQTL 1.74e-01 -0.174 0.128 0.925 Treg L2
ENSG00000139343 SNRPF 794404 sc-eQTL 7.59e-01 -0.0457 0.149 0.925 Treg L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 1.86e-02 -0.388 0.164 0.925 Treg L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.11e-02 -0.314 0.144 0.929 cDC L2
ENSG00000084110 HAL 656967 sc-eQTL 5.72e-01 0.0861 0.152 0.929 cDC L2
ENSG00000111144 LTA4H 609812 sc-eQTL 4.47e-01 0.0991 0.13 0.929 cDC L2
ENSG00000111145 ELK3 458957 sc-eQTL 9.00e-02 0.291 0.171 0.929 cDC L2
ENSG00000139343 SNRPF 794404 sc-eQTL 3.28e-01 -0.141 0.144 0.929 cDC L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 2.70e-01 0.193 0.175 0.929 cDC L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 2.88e-01 -0.157 0.147 0.929 cDC L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.36e-01 -0.117 0.121 0.925 cMono_IL1B L2
ENSG00000084110 HAL 656967 sc-eQTL 4.36e-01 -0.103 0.132 0.925 cMono_IL1B L2
ENSG00000111144 LTA4H 609812 sc-eQTL 5.74e-01 0.0805 0.143 0.925 cMono_IL1B L2
ENSG00000111145 ELK3 458957 sc-eQTL 7.06e-01 0.0416 0.11 0.925 cMono_IL1B L2
ENSG00000139343 SNRPF 794404 sc-eQTL 5.93e-01 -0.0608 0.114 0.925 cMono_IL1B L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 4.01e-01 0.131 0.156 0.925 cMono_IL1B L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 5.17e-01 -0.0947 0.146 0.925 cMono_IL1B L2
ENSG00000059758 CDK17 252852 sc-eQTL 6.33e-01 -0.0653 0.137 0.925 cMono_S100A L2
ENSG00000084110 HAL 656967 sc-eQTL 7.06e-02 0.277 0.152 0.925 cMono_S100A L2
ENSG00000111144 LTA4H 609812 sc-eQTL 9.62e-01 0.00727 0.153 0.925 cMono_S100A L2
ENSG00000111145 ELK3 458957 sc-eQTL 7.68e-01 0.0368 0.125 0.925 cMono_S100A L2
ENSG00000139343 SNRPF 794404 sc-eQTL 8.47e-01 -0.0239 0.123 0.925 cMono_S100A L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.39e-01 -0.0338 0.167 0.925 cMono_S100A L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 1.69e-01 -0.215 0.156 0.925 cMono_S100A L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.00e-01 -0.0939 0.139 0.93 gdT L2
ENSG00000074527 NTN4 862180 sc-eQTL 8.51e-01 -0.0301 0.16 0.93 gdT L2
ENSG00000111144 LTA4H 609812 sc-eQTL 8.77e-01 0.0324 0.208 0.93 gdT L2
ENSG00000111145 ELK3 458957 sc-eQTL 2.83e-01 0.207 0.192 0.93 gdT L2
ENSG00000139343 SNRPF 794404 sc-eQTL 2.40e-01 0.218 0.185 0.93 gdT L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 4.09e-01 -0.17 0.205 0.93 gdT L2
ENSG00000188596 CFAP54 163761 sc-eQTL 6.16e-01 -0.0905 0.18 0.93 gdT L2
ENSG00000059758 CDK17 252852 sc-eQTL 5.81e-01 0.0863 0.156 0.922 intMono L2
ENSG00000084110 HAL 656967 sc-eQTL 5.95e-02 -0.297 0.157 0.922 intMono L2
ENSG00000111144 LTA4H 609812 sc-eQTL 5.62e-01 0.0941 0.162 0.922 intMono L2
ENSG00000111145 ELK3 458957 sc-eQTL 5.08e-01 -0.0956 0.144 0.922 intMono L2
ENSG00000139343 SNRPF 794404 sc-eQTL 2.23e-01 0.188 0.154 0.922 intMono L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 5.44e-01 0.0973 0.16 0.922 intMono L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 3.89e-01 0.139 0.161 0.922 intMono L2
ENSG00000059758 CDK17 252852 sc-eQTL 3.12e-02 -0.265 0.122 0.925 ncMono L2
ENSG00000084110 HAL 656967 sc-eQTL 3.58e-01 0.127 0.138 0.925 ncMono L2
ENSG00000111144 LTA4H 609812 sc-eQTL 2.71e-01 0.169 0.153 0.925 ncMono L2
ENSG00000111145 ELK3 458957 sc-eQTL 8.13e-01 0.0312 0.132 0.925 ncMono L2
ENSG00000139343 SNRPF 794404 sc-eQTL 8.05e-02 -0.235 0.134 0.925 ncMono L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 6.86e-01 0.0579 0.143 0.925 ncMono L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 7.04e-01 -0.0621 0.163 0.925 ncMono L2
ENSG00000059758 CDK17 252852 sc-eQTL 8.00e-01 -0.0447 0.176 0.932 pDC L2
ENSG00000084110 HAL 656967 sc-eQTL 8.28e-01 0.0324 0.149 0.932 pDC L2
ENSG00000111144 LTA4H 609812 sc-eQTL 5.23e-01 0.106 0.166 0.932 pDC L2
ENSG00000111145 ELK3 458957 sc-eQTL 1.19e-01 0.317 0.202 0.932 pDC L2
ENSG00000139343 SNRPF 794404 sc-eQTL 8.52e-01 0.0331 0.178 0.932 pDC L2
ENSG00000139350 NEDD1 -253891 sc-eQTL 2.82e-01 -0.211 0.195 0.932 pDC L2
ENSG00000257715 AC007298.1 628009 sc-eQTL 8.29e-01 0.0364 0.168 0.932 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 252852 sc-eQTL 5.98e-01 0.0562 0.107 0.925 B_Memory LOneK1K
ENSG00000111144 LTA4H 609812 sc-eQTL 3.04e-01 0.114 0.11 0.925 B_Memory LOneK1K
ENSG00000111145 ELK3 458957 sc-eQTL 5.19e-01 0.0816 0.126 0.925 B_Memory LOneK1K
ENSG00000139343 SNRPF 794404 sc-eQTL 7.86e-01 -0.0334 0.123 0.925 B_Memory LOneK1K
ENSG00000139350 NEDD1 -253891 sc-eQTL 7.91e-01 -0.0426 0.161 0.925 B_Memory LOneK1K
ENSG00000059758 CDK17 252852 sc-eQTL 6.51e-01 0.0413 0.0913 0.925 B_Naive LOneK1K
ENSG00000111144 LTA4H 609812 sc-eQTL 7.87e-01 -0.0277 0.102 0.925 B_Naive LOneK1K
ENSG00000111145 ELK3 458957 sc-eQTL 1.67e-01 0.161 0.116 0.925 B_Naive LOneK1K
ENSG00000139343 SNRPF 794404 sc-eQTL 5.65e-01 -0.0678 0.117 0.925 B_Naive LOneK1K
ENSG00000139350 NEDD1 -253891 sc-eQTL 1.27e-01 0.237 0.155 0.925 B_Naive LOneK1K
ENSG00000059758 CDK17 252852 sc-eQTL 2.32e-01 -0.131 0.109 0.925 CD14_Mono LOneK1K
ENSG00000084110 HAL 656967 sc-eQTL 6.35e-01 0.0631 0.133 0.925 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 609812 sc-eQTL 6.02e-01 0.0762 0.146 0.925 CD14_Mono LOneK1K
ENSG00000111145 ELK3 458957 sc-eQTL 6.35e-01 0.0502 0.105 0.925 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 794404 sc-eQTL 7.95e-01 -0.0265 0.102 0.925 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.57e-01 0.0289 0.16 0.925 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 628009 sc-eQTL 3.85e-01 -0.128 0.148 0.925 CD14_Mono LOneK1K
ENSG00000059758 CDK17 252852 sc-eQTL 1.67e-01 -0.16 0.115 0.925 CD16_Mono LOneK1K
ENSG00000084110 HAL 656967 sc-eQTL 5.98e-01 -0.0723 0.137 0.925 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 609812 sc-eQTL 3.47e-01 0.143 0.151 0.925 CD16_Mono LOneK1K
ENSG00000111145 ELK3 458957 sc-eQTL 8.70e-01 0.0184 0.112 0.925 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 794404 sc-eQTL 9.16e-01 0.0122 0.116 0.925 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -253891 sc-eQTL 9.17e-01 0.0155 0.148 0.925 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 628009 sc-eQTL 9.73e-01 0.0054 0.157 0.925 CD16_Mono LOneK1K
ENSG00000059758 CDK17 252852 sc-eQTL 3.84e-02 -0.163 0.0784 0.925 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 609812 sc-eQTL 7.20e-01 0.0495 0.138 0.925 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 458957 sc-eQTL 7.71e-01 0.0367 0.126 0.925 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 794404 sc-eQTL 4.83e-01 -0.0757 0.108 0.925 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -253891 sc-eQTL 8.96e-01 -0.0176 0.134 0.925 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -253891 eQTL 1.4e-06 0.208 0.0428 0.0 0.0 0.0731

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000059758 \N 252852 3.25e-06 2.61e-06 8.7e-07 1.76e-06 8.7e-07 7.3e-07 2.25e-06 1.01e-06 2.78e-06 1.67e-06 2.78e-06 2.2e-06 3.66e-06 1.39e-06 9.35e-07 2.27e-06 1.64e-06 2.12e-06 1.34e-06 8.79e-07 1.93e-06 3.45e-06 3.2e-06 1.8e-06 3.8e-06 1.46e-06 1.84e-06 1.84e-06 3.22e-06 1.79e-06 1.86e-06 5.6e-07 5.69e-07 1.92e-06 1.43e-06 9.25e-07 9.21e-07 4.65e-07 1.28e-06 3.64e-07 4.44e-07 3.22e-06 6.37e-07 1.67e-07 3.51e-07 3.8e-07 7.44e-07 3.19e-07 3.73e-07
ENSG00000139350 NEDD1 -253891 3.24e-06 2.47e-06 8.5e-07 1.86e-06 8.52e-07 7.11e-07 2.28e-06 9.72e-07 2.74e-06 1.67e-06 2.72e-06 2.09e-06 3.64e-06 1.41e-06 9.15e-07 2.23e-06 1.62e-06 2.1e-06 1.33e-06 8.79e-07 1.98e-06 3.43e-06 3.09e-06 1.8e-06 3.74e-06 1.37e-06 1.84e-06 1.84e-06 3.17e-06 1.79e-06 1.89e-06 5.76e-07 5.88e-07 1.87e-06 1.33e-06 9.43e-07 9.06e-07 4.48e-07 1.27e-06 3.27e-07 4.16e-07 3.27e-06 6.52e-07 1.74e-07 3.35e-07 3.64e-07 7.12e-07 3.03e-07 3.42e-07