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Genes within 1Mb (chr12:96646492:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 246012 sc-eQTL 3.97e-01 0.0694 0.0818 0.923 B L1
ENSG00000111144 LTA4H 602972 sc-eQTL 8.11e-01 0.0244 0.102 0.923 B L1
ENSG00000111145 ELK3 452117 sc-eQTL 3.73e-01 0.0966 0.108 0.923 B L1
ENSG00000139343 SNRPF 787564 sc-eQTL 7.26e-01 -0.0346 0.0984 0.923 B L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.50e-02 0.247 0.143 0.923 B L1
ENSG00000059758 CDK17 246012 sc-eQTL 1.98e-01 -0.0878 0.068 0.923 CD4T L1
ENSG00000111144 LTA4H 602972 sc-eQTL 2.44e-01 0.109 0.0934 0.923 CD4T L1
ENSG00000111145 ELK3 452117 sc-eQTL 3.38e-01 -0.0972 0.101 0.923 CD4T L1
ENSG00000139343 SNRPF 787564 sc-eQTL 4.97e-01 -0.0603 0.0886 0.923 CD4T L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 7.10e-01 0.0407 0.109 0.923 CD4T L1
ENSG00000059758 CDK17 246012 sc-eQTL 9.75e-01 0.00215 0.0693 0.923 CD8T L1
ENSG00000111144 LTA4H 602972 sc-eQTL 2.07e-01 -0.0938 0.0741 0.923 CD8T L1
ENSG00000111145 ELK3 452117 sc-eQTL 6.64e-01 0.0487 0.112 0.923 CD8T L1
ENSG00000139343 SNRPF 787564 sc-eQTL 6.97e-01 -0.0358 0.0917 0.923 CD8T L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.11e-01 0.0621 0.122 0.923 CD8T L1
ENSG00000059758 CDK17 246012 sc-eQTL 2.75e-01 -0.138 0.126 0.923 DC L1
ENSG00000084110 HAL 650127 sc-eQTL 4.05e-01 0.12 0.144 0.923 DC L1
ENSG00000111144 LTA4H 602972 sc-eQTL 7.19e-01 0.0424 0.118 0.923 DC L1
ENSG00000111145 ELK3 452117 sc-eQTL 8.52e-02 0.248 0.143 0.923 DC L1
ENSG00000139343 SNRPF 787564 sc-eQTL 4.32e-01 -0.0944 0.12 0.923 DC L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 5.96e-01 -0.0817 0.154 0.923 DC L1
ENSG00000257715 AC007298.1 621169 sc-eQTL 8.33e-01 -0.0294 0.139 0.923 DC L1
ENSG00000059758 CDK17 246012 sc-eQTL 4.97e-01 -0.0709 0.104 0.923 Mono L1
ENSG00000084110 HAL 650127 sc-eQTL 8.78e-01 0.0202 0.131 0.923 Mono L1
ENSG00000111144 LTA4H 602972 sc-eQTL 9.12e-01 0.0164 0.148 0.923 Mono L1
ENSG00000111145 ELK3 452117 sc-eQTL 8.60e-01 0.0177 0.0997 0.923 Mono L1
ENSG00000139343 SNRPF 787564 sc-eQTL 5.98e-01 -0.0497 0.0939 0.923 Mono L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 7.43e-01 0.0474 0.144 0.923 Mono L1
ENSG00000257715 AC007298.1 621169 sc-eQTL 1.89e-01 -0.184 0.139 0.923 Mono L1
ENSG00000059758 CDK17 246012 sc-eQTL 8.80e-02 -0.132 0.0768 0.923 NK L1
ENSG00000111144 LTA4H 602972 sc-eQTL 7.20e-01 0.0471 0.131 0.923 NK L1
ENSG00000111145 ELK3 452117 sc-eQTL 6.42e-01 0.0579 0.124 0.923 NK L1
ENSG00000139343 SNRPF 787564 sc-eQTL 7.33e-01 -0.0352 0.103 0.923 NK L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 7.89e-01 -0.035 0.131 0.923 NK L1
ENSG00000059758 CDK17 246012 sc-eQTL 4.32e-01 -0.0505 0.0641 0.923 Other_T L1
ENSG00000074527 NTN4 855340 sc-eQTL 9.78e-01 -0.00327 0.119 0.923 Other_T L1
ENSG00000111144 LTA4H 602972 sc-eQTL 1.06e-01 0.217 0.133 0.923 Other_T L1
ENSG00000111145 ELK3 452117 sc-eQTL 7.94e-01 -0.0273 0.105 0.923 Other_T L1
ENSG00000139343 SNRPF 787564 sc-eQTL 1.09e-01 -0.156 0.0967 0.923 Other_T L1
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.49e-01 -0.139 0.148 0.923 Other_T L1
ENSG00000188596 CFAP54 156921 sc-eQTL 1.59e-02 0.368 0.151 0.923 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 246012 sc-eQTL 5.21e-01 -0.0943 0.146 0.921 B_Activated L2
ENSG00000111144 LTA4H 602972 sc-eQTL 7.42e-01 0.0548 0.166 0.921 B_Activated L2
ENSG00000111145 ELK3 452117 sc-eQTL 3.83e-01 0.153 0.175 0.921 B_Activated L2
ENSG00000139343 SNRPF 787564 sc-eQTL 4.09e-01 -0.137 0.165 0.921 B_Activated L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 2.51e-01 -0.199 0.173 0.921 B_Activated L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.98e-01 0.106 0.125 0.923 B_Intermediate L2
ENSG00000111144 LTA4H 602972 sc-eQTL 3.77e-01 0.107 0.121 0.923 B_Intermediate L2
ENSG00000111145 ELK3 452117 sc-eQTL 8.65e-01 -0.0233 0.137 0.923 B_Intermediate L2
ENSG00000139343 SNRPF 787564 sc-eQTL 8.00e-01 0.0346 0.136 0.923 B_Intermediate L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.02e-01 0.0401 0.16 0.923 B_Intermediate L2
ENSG00000059758 CDK17 246012 sc-eQTL 6.07e-01 -0.0623 0.121 0.922 B_Memory L2
ENSG00000111144 LTA4H 602972 sc-eQTL 2.73e-01 0.153 0.139 0.922 B_Memory L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.22e-01 0.11 0.137 0.922 B_Memory L2
ENSG00000139343 SNRPF 787564 sc-eQTL 4.83e-01 -0.102 0.145 0.922 B_Memory L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.48e-01 -0.0309 0.161 0.922 B_Memory L2
ENSG00000059758 CDK17 246012 sc-eQTL 9.34e-01 0.00847 0.102 0.923 B_Naive1 L2
ENSG00000111144 LTA4H 602972 sc-eQTL 8.52e-01 -0.0199 0.106 0.923 B_Naive1 L2
ENSG00000111145 ELK3 452117 sc-eQTL 1.99e-01 0.161 0.125 0.923 B_Naive1 L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.09e-01 -0.124 0.122 0.923 B_Naive1 L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 1.59e-02 0.376 0.155 0.923 B_Naive1 L2
ENSG00000059758 CDK17 246012 sc-eQTL 6.91e-01 0.0505 0.127 0.923 B_Naive2 L2
ENSG00000111144 LTA4H 602972 sc-eQTL 3.87e-01 0.104 0.12 0.923 B_Naive2 L2
ENSG00000111145 ELK3 452117 sc-eQTL 2.70e-01 0.157 0.142 0.923 B_Naive2 L2
ENSG00000139343 SNRPF 787564 sc-eQTL 5.93e-01 -0.0753 0.141 0.923 B_Naive2 L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.27e-01 -0.0815 0.168 0.923 B_Naive2 L2
ENSG00000059758 CDK17 246012 sc-eQTL 5.89e-01 0.0641 0.119 0.92 CD4_CTL L2
ENSG00000111144 LTA4H 602972 sc-eQTL 5.18e-02 0.325 0.166 0.92 CD4_CTL L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.67e-01 -0.123 0.169 0.92 CD4_CTL L2
ENSG00000139343 SNRPF 787564 sc-eQTL 6.45e-01 -0.068 0.147 0.92 CD4_CTL L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 1.83e-01 -0.227 0.17 0.92 CD4_CTL L2
ENSG00000059758 CDK17 246012 sc-eQTL 2.49e-01 -0.0857 0.0741 0.923 CD4_Naive L2
ENSG00000111144 LTA4H 602972 sc-eQTL 1.35e-01 0.16 0.107 0.923 CD4_Naive L2
ENSG00000111145 ELK3 452117 sc-eQTL 2.71e-01 -0.118 0.107 0.923 CD4_Naive L2
ENSG00000139343 SNRPF 787564 sc-eQTL 2.51e-01 -0.11 0.0952 0.923 CD4_Naive L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.76e-01 0.104 0.117 0.923 CD4_Naive L2
ENSG00000059758 CDK17 246012 sc-eQTL 9.03e-01 -0.00889 0.0726 0.923 CD4_TCM L2
ENSG00000111144 LTA4H 602972 sc-eQTL 1.17e-01 0.193 0.122 0.923 CD4_TCM L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.75e-01 -0.0865 0.121 0.923 CD4_TCM L2
ENSG00000139343 SNRPF 787564 sc-eQTL 2.71e-01 0.109 0.0991 0.923 CD4_TCM L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.79e-01 0.0563 0.136 0.923 CD4_TCM L2
ENSG00000059758 CDK17 246012 sc-eQTL 4.37e-01 0.0684 0.0879 0.923 CD4_TEM L2
ENSG00000111144 LTA4H 602972 sc-eQTL 7.60e-02 -0.24 0.135 0.923 CD4_TEM L2
ENSG00000111145 ELK3 452117 sc-eQTL 2.96e-01 0.132 0.126 0.923 CD4_TEM L2
ENSG00000139343 SNRPF 787564 sc-eQTL 6.94e-01 0.0521 0.132 0.923 CD4_TEM L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 9.60e-01 -0.00793 0.157 0.923 CD4_TEM L2
ENSG00000059758 CDK17 246012 sc-eQTL 7.58e-01 0.0263 0.085 0.923 CD8_CTL L2
ENSG00000111144 LTA4H 602972 sc-eQTL 5.01e-01 -0.103 0.153 0.923 CD8_CTL L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.61e-01 0.103 0.14 0.923 CD8_CTL L2
ENSG00000139343 SNRPF 787564 sc-eQTL 5.59e-01 -0.0751 0.128 0.923 CD8_CTL L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.28e-01 0.141 0.144 0.923 CD8_CTL L2
ENSG00000059758 CDK17 246012 sc-eQTL 5.52e-01 -0.0611 0.103 0.923 CD8_Naive L2
ENSG00000111144 LTA4H 602972 sc-eQTL 6.34e-01 -0.0586 0.123 0.923 CD8_Naive L2
ENSG00000111145 ELK3 452117 sc-eQTL 6.75e-01 0.0545 0.13 0.923 CD8_Naive L2
ENSG00000139343 SNRPF 787564 sc-eQTL 9.19e-02 -0.197 0.116 0.923 CD8_Naive L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.82e-01 0.0208 0.139 0.923 CD8_Naive L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.94e-01 0.0951 0.111 0.921 CD8_TCM L2
ENSG00000111144 LTA4H 602972 sc-eQTL 6.96e-02 0.297 0.163 0.921 CD8_TCM L2
ENSG00000111145 ELK3 452117 sc-eQTL 9.62e-01 0.00658 0.139 0.921 CD8_TCM L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.03e-01 0.165 0.16 0.921 CD8_TCM L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 4.39e-01 -0.121 0.156 0.921 CD8_TCM L2
ENSG00000059758 CDK17 246012 sc-eQTL 7.18e-02 0.245 0.135 0.92 CD8_TEM L2
ENSG00000111144 LTA4H 602972 sc-eQTL 4.50e-01 0.126 0.167 0.92 CD8_TEM L2
ENSG00000111145 ELK3 452117 sc-eQTL 2.79e-01 0.178 0.164 0.92 CD8_TEM L2
ENSG00000139343 SNRPF 787564 sc-eQTL 6.00e-01 -0.0803 0.153 0.92 CD8_TEM L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.76e-01 -0.026 0.166 0.92 CD8_TEM L2
ENSG00000059758 CDK17 246012 sc-eQTL 5.80e-01 0.0509 0.0918 0.922 MAIT L2
ENSG00000074527 NTN4 855340 sc-eQTL 8.09e-01 0.0301 0.124 0.922 MAIT L2
ENSG00000111144 LTA4H 602972 sc-eQTL 4.90e-01 0.098 0.142 0.922 MAIT L2
ENSG00000111145 ELK3 452117 sc-eQTL 7.87e-01 -0.0323 0.119 0.922 MAIT L2
ENSG00000139343 SNRPF 787564 sc-eQTL 7.92e-03 -0.364 0.136 0.922 MAIT L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.98e-01 -0.0602 0.155 0.922 MAIT L2
ENSG00000188596 CFAP54 156921 sc-eQTL 1.30e-01 0.232 0.153 0.922 MAIT L2
ENSG00000059758 CDK17 246012 sc-eQTL 2.38e-01 0.114 0.0966 0.922 NK_CD56bright L2
ENSG00000111144 LTA4H 602972 sc-eQTL 7.58e-01 -0.0443 0.143 0.922 NK_CD56bright L2
ENSG00000111145 ELK3 452117 sc-eQTL 8.29e-01 0.0329 0.152 0.922 NK_CD56bright L2
ENSG00000139343 SNRPF 787564 sc-eQTL 1.84e-01 -0.211 0.159 0.922 NK_CD56bright L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.84e-01 -0.14 0.16 0.922 NK_CD56bright L2
ENSG00000059758 CDK17 246012 sc-eQTL 1.64e-01 -0.115 0.0826 0.922 NK_CD56dim L2
ENSG00000111144 LTA4H 602972 sc-eQTL 7.20e-01 -0.0538 0.15 0.922 NK_CD56dim L2
ENSG00000111145 ELK3 452117 sc-eQTL 9.48e-01 -0.00861 0.133 0.922 NK_CD56dim L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.61e-01 -0.115 0.126 0.922 NK_CD56dim L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.89e-01 -0.125 0.145 0.922 NK_CD56dim L2
ENSG00000059758 CDK17 246012 sc-eQTL 4.20e-02 -0.267 0.131 0.927 NK_HLA L2
ENSG00000111144 LTA4H 602972 sc-eQTL 1.37e-01 0.257 0.172 0.927 NK_HLA L2
ENSG00000111145 ELK3 452117 sc-eQTL 8.62e-01 0.028 0.161 0.927 NK_HLA L2
ENSG00000139343 SNRPF 787564 sc-eQTL 7.92e-01 -0.0441 0.167 0.927 NK_HLA L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 1.45e-01 0.231 0.157 0.927 NK_HLA L2
ENSG00000059758 CDK17 246012 sc-eQTL 5.89e-01 -0.0491 0.0906 0.922 NK_cytokine L2
ENSG00000111144 LTA4H 602972 sc-eQTL 9.59e-01 0.00794 0.153 0.922 NK_cytokine L2
ENSG00000111145 ELK3 452117 sc-eQTL 9.16e-01 0.0154 0.147 0.922 NK_cytokine L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.20e-01 -0.124 0.124 0.922 NK_cytokine L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.27e-01 0.0747 0.154 0.922 NK_cytokine L2
ENSG00000059758 CDK17 246012 sc-eQTL 8.36e-01 0.0347 0.167 0.922 PB L2
ENSG00000111144 LTA4H 602972 sc-eQTL 4.79e-01 0.105 0.147 0.922 PB L2
ENSG00000111145 ELK3 452117 sc-eQTL 2.41e-01 0.222 0.188 0.922 PB L2
ENSG00000139343 SNRPF 787564 sc-eQTL 9.70e-01 0.007 0.185 0.922 PB L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.71e-01 -0.0358 0.219 0.922 PB L2
ENSG00000059758 CDK17 246012 sc-eQTL 4.46e-01 0.0779 0.102 0.922 Pro_T L2
ENSG00000074527 NTN4 855340 sc-eQTL 1.32e-01 0.172 0.114 0.922 Pro_T L2
ENSG00000111144 LTA4H 602972 sc-eQTL 1.51e-01 0.194 0.134 0.922 Pro_T L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.15e-01 -0.133 0.163 0.922 Pro_T L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.98e-01 0.087 0.103 0.922 Pro_T L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.35e-01 -0.0311 0.149 0.922 Pro_T L2
ENSG00000188596 CFAP54 156921 sc-eQTL 5.82e-02 0.228 0.12 0.922 Pro_T L2
ENSG00000059758 CDK17 246012 sc-eQTL 4.65e-01 -0.0808 0.11 0.923 Treg L2
ENSG00000111144 LTA4H 602972 sc-eQTL 1.46e-01 0.203 0.139 0.923 Treg L2
ENSG00000111145 ELK3 452117 sc-eQTL 1.70e-01 -0.174 0.126 0.923 Treg L2
ENSG00000139343 SNRPF 787564 sc-eQTL 6.06e-01 -0.0758 0.147 0.923 Treg L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 1.60e-02 -0.392 0.162 0.923 Treg L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.00e-02 -0.311 0.142 0.927 cDC L2
ENSG00000084110 HAL 650127 sc-eQTL 4.71e-01 0.108 0.15 0.927 cDC L2
ENSG00000111144 LTA4H 602972 sc-eQTL 5.91e-01 0.0691 0.128 0.927 cDC L2
ENSG00000111145 ELK3 452117 sc-eQTL 5.69e-02 0.322 0.168 0.927 cDC L2
ENSG00000139343 SNRPF 787564 sc-eQTL 2.60e-01 -0.16 0.142 0.927 cDC L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 2.15e-01 0.215 0.172 0.927 cDC L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 2.90e-01 -0.154 0.145 0.927 cDC L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.22e-01 -0.119 0.12 0.923 cMono_IL1B L2
ENSG00000084110 HAL 650127 sc-eQTL 5.79e-01 -0.0728 0.131 0.923 cMono_IL1B L2
ENSG00000111144 LTA4H 602972 sc-eQTL 5.15e-01 0.0923 0.141 0.923 cMono_IL1B L2
ENSG00000111145 ELK3 452117 sc-eQTL 9.71e-01 0.00401 0.109 0.923 cMono_IL1B L2
ENSG00000139343 SNRPF 787564 sc-eQTL 6.55e-01 -0.0503 0.112 0.923 cMono_IL1B L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.81e-01 0.136 0.155 0.923 cMono_IL1B L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 5.90e-01 -0.0779 0.144 0.923 cMono_IL1B L2
ENSG00000059758 CDK17 246012 sc-eQTL 5.84e-01 -0.0743 0.135 0.923 cMono_S100A L2
ENSG00000084110 HAL 650127 sc-eQTL 4.33e-02 0.306 0.15 0.923 cMono_S100A L2
ENSG00000111144 LTA4H 602972 sc-eQTL 7.42e-01 0.05 0.152 0.923 cMono_S100A L2
ENSG00000111145 ELK3 452117 sc-eQTL 8.33e-01 0.0261 0.124 0.923 cMono_S100A L2
ENSG00000139343 SNRPF 787564 sc-eQTL 7.77e-01 -0.0346 0.122 0.923 cMono_S100A L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 5.93e-01 -0.0881 0.165 0.923 cMono_S100A L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 1.50e-01 -0.223 0.154 0.923 cMono_S100A L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.68e-01 -0.123 0.136 0.927 gdT L2
ENSG00000074527 NTN4 855340 sc-eQTL 9.39e-01 -0.012 0.157 0.927 gdT L2
ENSG00000111144 LTA4H 602972 sc-eQTL 9.84e-01 0.00424 0.205 0.927 gdT L2
ENSG00000111145 ELK3 452117 sc-eQTL 4.39e-01 0.147 0.189 0.927 gdT L2
ENSG00000139343 SNRPF 787564 sc-eQTL 3.46e-01 0.172 0.182 0.927 gdT L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.62e-01 -0.184 0.201 0.927 gdT L2
ENSG00000188596 CFAP54 156921 sc-eQTL 7.73e-01 -0.0512 0.177 0.927 gdT L2
ENSG00000059758 CDK17 246012 sc-eQTL 4.70e-01 0.112 0.154 0.92 intMono L2
ENSG00000084110 HAL 650127 sc-eQTL 2.83e-02 -0.341 0.154 0.92 intMono L2
ENSG00000111144 LTA4H 602972 sc-eQTL 6.20e-01 0.0796 0.16 0.92 intMono L2
ENSG00000111145 ELK3 452117 sc-eQTL 3.54e-01 -0.132 0.143 0.92 intMono L2
ENSG00000139343 SNRPF 787564 sc-eQTL 2.42e-01 0.179 0.152 0.92 intMono L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 5.60e-01 0.0926 0.158 0.92 intMono L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 7.80e-01 0.0447 0.159 0.92 intMono L2
ENSG00000059758 CDK17 246012 sc-eQTL 3.21e-02 -0.26 0.12 0.923 ncMono L2
ENSG00000084110 HAL 650127 sc-eQTL 4.84e-01 0.0951 0.136 0.923 ncMono L2
ENSG00000111144 LTA4H 602972 sc-eQTL 2.70e-01 0.167 0.151 0.923 ncMono L2
ENSG00000111145 ELK3 452117 sc-eQTL 7.93e-01 0.0342 0.13 0.923 ncMono L2
ENSG00000139343 SNRPF 787564 sc-eQTL 8.15e-02 -0.231 0.132 0.923 ncMono L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 6.23e-01 0.0695 0.141 0.923 ncMono L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 6.82e-01 -0.066 0.161 0.923 ncMono L2
ENSG00000059758 CDK17 246012 sc-eQTL 8.64e-01 -0.0297 0.173 0.929 pDC L2
ENSG00000084110 HAL 650127 sc-eQTL 8.35e-01 0.0304 0.146 0.929 pDC L2
ENSG00000111144 LTA4H 602972 sc-eQTL 6.87e-01 0.0657 0.163 0.929 pDC L2
ENSG00000111145 ELK3 452117 sc-eQTL 1.32e-01 0.3 0.198 0.929 pDC L2
ENSG00000139343 SNRPF 787564 sc-eQTL 9.15e-01 0.0185 0.174 0.929 pDC L2
ENSG00000139350 NEDD1 -260731 sc-eQTL 3.27e-01 -0.188 0.192 0.929 pDC L2
ENSG00000257715 AC007298.1 621169 sc-eQTL 9.19e-01 -0.0167 0.165 0.929 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 246012 sc-eQTL 6.32e-01 0.0505 0.105 0.923 B_Memory LOneK1K
ENSG00000111144 LTA4H 602972 sc-eQTL 3.00e-01 0.113 0.109 0.923 B_Memory LOneK1K
ENSG00000111145 ELK3 452117 sc-eQTL 5.67e-01 0.0717 0.125 0.923 B_Memory LOneK1K
ENSG00000139343 SNRPF 787564 sc-eQTL 7.74e-01 -0.0349 0.121 0.923 B_Memory LOneK1K
ENSG00000139350 NEDD1 -260731 sc-eQTL 9.24e-01 -0.0152 0.159 0.923 B_Memory LOneK1K
ENSG00000059758 CDK17 246012 sc-eQTL 7.41e-01 0.0299 0.0903 0.923 B_Naive LOneK1K
ENSG00000111144 LTA4H 602972 sc-eQTL 7.93e-01 -0.0266 0.101 0.923 B_Naive LOneK1K
ENSG00000111145 ELK3 452117 sc-eQTL 1.46e-01 0.167 0.115 0.923 B_Naive LOneK1K
ENSG00000139343 SNRPF 787564 sc-eQTL 4.35e-01 -0.0907 0.116 0.923 B_Naive LOneK1K
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.19e-02 0.267 0.153 0.923 B_Naive LOneK1K
ENSG00000059758 CDK17 246012 sc-eQTL 2.13e-01 -0.136 0.108 0.923 CD14_Mono LOneK1K
ENSG00000084110 HAL 650127 sc-eQTL 4.54e-01 0.0987 0.132 0.923 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 602972 sc-eQTL 4.80e-01 0.102 0.145 0.923 CD14_Mono LOneK1K
ENSG00000111145 ELK3 452117 sc-eQTL 8.93e-01 0.014 0.105 0.923 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 787564 sc-eQTL 8.43e-01 -0.02 0.101 0.923 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -260731 sc-eQTL 9.97e-01 -0.000526 0.158 0.923 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 621169 sc-eQTL 4.01e-01 -0.123 0.146 0.923 CD14_Mono LOneK1K
ENSG00000059758 CDK17 246012 sc-eQTL 2.07e-01 -0.144 0.114 0.922 CD16_Mono LOneK1K
ENSG00000084110 HAL 650127 sc-eQTL 4.76e-01 -0.0964 0.135 0.922 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 602972 sc-eQTL 3.78e-01 0.132 0.15 0.922 CD16_Mono LOneK1K
ENSG00000111145 ELK3 452117 sc-eQTL 8.84e-01 0.0162 0.111 0.922 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 787564 sc-eQTL 8.54e-01 0.0211 0.114 0.922 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.32e-01 0.031 0.147 0.922 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 621169 sc-eQTL 8.23e-01 -0.0346 0.155 0.922 CD16_Mono LOneK1K
ENSG00000059758 CDK17 246012 sc-eQTL 2.82e-02 -0.17 0.0771 0.922 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 602972 sc-eQTL 8.11e-01 0.0324 0.136 0.922 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 452117 sc-eQTL 7.02e-01 0.0475 0.124 0.922 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 787564 sc-eQTL 5.31e-01 -0.0667 0.106 0.922 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -260731 sc-eQTL 8.34e-01 -0.0279 0.132 0.922 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -260731 eQTL 1.54e-06 0.206 0.0427 0.0 0.0 0.0741

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000059758 \N 246012 3.58e-06 3.63e-06 6.64e-07 1.95e-06 1.64e-06 1.07e-06 2.41e-06 1.09e-06 4.76e-06 2.43e-06 3.62e-06 3.39e-06 5.37e-06 1.4e-06 1.44e-06 3.36e-06 2e-06 2.89e-06 1.5e-06 1.14e-06 3.1e-06 4.23e-06 3.49e-06 1.4e-06 4.54e-06 1.97e-06 2.51e-06 1.51e-06 4.2e-06 2.95e-06 1.99e-06 4.88e-07 5.91e-07 1.6e-06 1.9e-06 1.17e-06 1.08e-06 4.72e-07 9.26e-07 4.07e-07 6.91e-07 3.4e-06 3.65e-07 1.57e-07 6.37e-07 6.91e-07 1.12e-06 6.85e-07 5.83e-07
ENSG00000139350 NEDD1 -260731 3.21e-06 3.15e-06 6.9e-07 1.96e-06 1.33e-06 8.44e-07 2.45e-06 9.79e-07 3.58e-06 2.08e-06 3.13e-06 2.74e-06 4.2e-06 1.2e-06 1.26e-06 2.63e-06 1.82e-06 2.26e-06 1.45e-06 9.85e-07 2.77e-06 3.94e-06 3.42e-06 1.71e-06 4.08e-06 1.63e-06 2.43e-06 1.49e-06 3.79e-06 2.46e-06 2.06e-06 4.34e-07 7.93e-07 1.52e-06 1.91e-06 9e-07 1.02e-06 4.24e-07 1.08e-06 3.79e-07 5.18e-07 3.34e-06 3.65e-07 1.67e-07 5.95e-07 4.11e-07 1.13e-06 6.9e-07 4.98e-07