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Genes within 1Mb (chr12:96612504:G:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 212024 sc-eQTL 1.26e-03 0.16 0.0489 0.735 B L1
ENSG00000111144 LTA4H 568984 sc-eQTL 4.52e-01 0.0469 0.0622 0.735 B L1
ENSG00000111145 ELK3 418129 sc-eQTL 1.12e-02 0.167 0.0653 0.735 B L1
ENSG00000139343 SNRPF 753576 sc-eQTL 5.09e-02 0.117 0.0597 0.735 B L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 7.59e-01 0.027 0.0879 0.735 B L1
ENSG00000059758 CDK17 212024 sc-eQTL 6.40e-01 0.0192 0.0409 0.735 CD4T L1
ENSG00000111144 LTA4H 568984 sc-eQTL 5.14e-01 0.0367 0.0562 0.735 CD4T L1
ENSG00000111145 ELK3 418129 sc-eQTL 1.85e-01 -0.0807 0.0607 0.735 CD4T L1
ENSG00000139343 SNRPF 753576 sc-eQTL 3.32e-01 0.0516 0.0531 0.735 CD4T L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 3.72e-02 -0.136 0.0649 0.735 CD4T L1
ENSG00000059758 CDK17 212024 sc-eQTL 1.61e-01 0.0589 0.0419 0.735 CD8T L1
ENSG00000111144 LTA4H 568984 sc-eQTL 8.59e-02 -0.0774 0.0449 0.735 CD8T L1
ENSG00000111145 ELK3 418129 sc-eQTL 6.02e-01 -0.0355 0.068 0.735 CD8T L1
ENSG00000139343 SNRPF 753576 sc-eQTL 7.20e-01 0.02 0.0557 0.735 CD8T L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.41e-01 -0.109 0.0737 0.735 CD8T L1
ENSG00000059758 CDK17 212024 sc-eQTL 3.46e-01 0.0741 0.0785 0.734 DC L1
ENSG00000084110 HAL 616139 sc-eQTL 8.38e-01 0.0183 0.0895 0.734 DC L1
ENSG00000111144 LTA4H 568984 sc-eQTL 4.72e-03 0.205 0.0718 0.734 DC L1
ENSG00000111145 ELK3 418129 sc-eQTL 8.40e-01 0.0181 0.0897 0.734 DC L1
ENSG00000139343 SNRPF 753576 sc-eQTL 4.63e-01 0.0548 0.0745 0.734 DC L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.19e-01 -0.149 0.0952 0.734 DC L1
ENSG00000257715 AC007298.1 587181 sc-eQTL 4.55e-01 0.0647 0.0863 0.734 DC L1
ENSG00000059758 CDK17 212024 sc-eQTL 7.98e-01 -0.0161 0.063 0.735 Mono L1
ENSG00000084110 HAL 616139 sc-eQTL 9.42e-02 0.133 0.0788 0.735 Mono L1
ENSG00000111144 LTA4H 568984 sc-eQTL 3.34e-01 0.0867 0.0894 0.735 Mono L1
ENSG00000111145 ELK3 418129 sc-eQTL 8.15e-01 0.0141 0.0602 0.735 Mono L1
ENSG00000139343 SNRPF 753576 sc-eQTL 2.02e-01 -0.0723 0.0565 0.735 Mono L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.63e-01 0.121 0.0867 0.735 Mono L1
ENSG00000257715 AC007298.1 587181 sc-eQTL 9.16e-01 -0.00897 0.0844 0.735 Mono L1
ENSG00000059758 CDK17 212024 sc-eQTL 5.06e-01 0.0313 0.047 0.738 NK L1
ENSG00000111144 LTA4H 568984 sc-eQTL 3.21e-01 -0.0793 0.0796 0.738 NK L1
ENSG00000111145 ELK3 418129 sc-eQTL 6.28e-01 0.0367 0.0757 0.738 NK L1
ENSG00000139343 SNRPF 753576 sc-eQTL 5.78e-01 0.0349 0.0627 0.738 NK L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 5.32e-01 0.0497 0.0794 0.738 NK L1
ENSG00000059758 CDK17 212024 sc-eQTL 4.19e-01 0.0323 0.04 0.735 Other_T L1
ENSG00000074527 NTN4 821352 sc-eQTL 7.42e-01 -0.0244 0.074 0.735 Other_T L1
ENSG00000111144 LTA4H 568984 sc-eQTL 4.89e-01 0.058 0.0836 0.735 Other_T L1
ENSG00000111145 ELK3 418129 sc-eQTL 7.21e-02 -0.117 0.0648 0.735 Other_T L1
ENSG00000139343 SNRPF 753576 sc-eQTL 5.62e-01 -0.0352 0.0606 0.735 Other_T L1
ENSG00000139350 NEDD1 -294719 sc-eQTL 3.31e-01 -0.0898 0.0922 0.735 Other_T L1
ENSG00000188596 CFAP54 122933 sc-eQTL 2.97e-01 -0.0998 0.0955 0.735 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 212024 sc-eQTL 6.43e-01 0.0414 0.0891 0.727 B_Activated L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.35e-01 0.12 0.101 0.727 B_Activated L2
ENSG00000111145 ELK3 418129 sc-eQTL 2.04e-01 0.136 0.106 0.727 B_Activated L2
ENSG00000139343 SNRPF 753576 sc-eQTL 8.34e-01 -0.0212 0.101 0.727 B_Activated L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 2.48e-01 -0.122 0.105 0.727 B_Activated L2
ENSG00000059758 CDK17 212024 sc-eQTL 3.60e-03 0.223 0.0756 0.734 B_Intermediate L2
ENSG00000111144 LTA4H 568984 sc-eQTL 1.44e-01 0.109 0.0743 0.734 B_Intermediate L2
ENSG00000111145 ELK3 418129 sc-eQTL 9.20e-01 0.00847 0.0842 0.734 B_Intermediate L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.21e-01 0.13 0.0834 0.734 B_Intermediate L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 2.05e-01 0.125 0.0979 0.734 B_Intermediate L2
ENSG00000059758 CDK17 212024 sc-eQTL 2.81e-01 0.0806 0.0745 0.733 B_Memory L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.88e-02 0.188 0.0853 0.733 B_Memory L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.64e-02 0.15 0.0842 0.733 B_Memory L2
ENSG00000139343 SNRPF 753576 sc-eQTL 7.48e-01 -0.0289 0.0899 0.733 B_Memory L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 7.61e-01 -0.0303 0.0994 0.733 B_Memory L2
ENSG00000059758 CDK17 212024 sc-eQTL 9.21e-02 0.104 0.0614 0.735 B_Naive1 L2
ENSG00000111144 LTA4H 568984 sc-eQTL 7.84e-01 0.0178 0.0647 0.735 B_Naive1 L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.00e-04 0.256 0.0745 0.735 B_Naive1 L2
ENSG00000139343 SNRPF 753576 sc-eQTL 2.41e-01 0.0873 0.0742 0.735 B_Naive1 L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.32e-01 0.0457 0.0954 0.735 B_Naive1 L2
ENSG00000059758 CDK17 212024 sc-eQTL 7.65e-01 0.0237 0.0791 0.734 B_Naive2 L2
ENSG00000111144 LTA4H 568984 sc-eQTL 3.24e-01 0.074 0.0748 0.734 B_Naive2 L2
ENSG00000111145 ELK3 418129 sc-eQTL 3.15e-01 0.0888 0.0882 0.734 B_Naive2 L2
ENSG00000139343 SNRPF 753576 sc-eQTL 5.30e-01 0.0551 0.0877 0.734 B_Naive2 L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 9.93e-01 -0.000981 0.104 0.734 B_Naive2 L2
ENSG00000059758 CDK17 212024 sc-eQTL 9.26e-02 0.122 0.072 0.739 CD4_CTL L2
ENSG00000111144 LTA4H 568984 sc-eQTL 1.00e-01 -0.168 0.102 0.739 CD4_CTL L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.92e-01 -0.0555 0.104 0.739 CD4_CTL L2
ENSG00000139343 SNRPF 753576 sc-eQTL 4.62e-01 0.0663 0.0899 0.739 CD4_CTL L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.89e-01 0.0417 0.104 0.739 CD4_CTL L2
ENSG00000059758 CDK17 212024 sc-eQTL 6.61e-01 0.0196 0.0448 0.735 CD4_Naive L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.85e-01 0.0693 0.0646 0.735 CD4_Naive L2
ENSG00000111145 ELK3 418129 sc-eQTL 2.42e-01 -0.0758 0.0646 0.735 CD4_Naive L2
ENSG00000139343 SNRPF 753576 sc-eQTL 3.64e-01 0.0523 0.0575 0.735 CD4_Naive L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.04e-02 -0.133 0.0703 0.735 CD4_Naive L2
ENSG00000059758 CDK17 212024 sc-eQTL 4.05e-01 0.0364 0.0436 0.735 CD4_TCM L2
ENSG00000111144 LTA4H 568984 sc-eQTL 7.62e-01 -0.0224 0.074 0.735 CD4_TCM L2
ENSG00000111145 ELK3 418129 sc-eQTL 2.14e-02 -0.167 0.0719 0.735 CD4_TCM L2
ENSG00000139343 SNRPF 753576 sc-eQTL 3.01e-01 0.0617 0.0596 0.735 CD4_TCM L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 9.58e-01 0.00434 0.0816 0.735 CD4_TCM L2
ENSG00000059758 CDK17 212024 sc-eQTL 1.27e-01 0.0817 0.0533 0.735 CD4_TEM L2
ENSG00000111144 LTA4H 568984 sc-eQTL 7.50e-01 -0.0264 0.0827 0.735 CD4_TEM L2
ENSG00000111145 ELK3 418129 sc-eQTL 8.74e-01 0.0122 0.0769 0.735 CD4_TEM L2
ENSG00000139343 SNRPF 753576 sc-eQTL 2.29e-01 -0.0968 0.0802 0.735 CD4_TEM L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 5.14e-01 -0.0623 0.0954 0.735 CD4_TEM L2
ENSG00000059758 CDK17 212024 sc-eQTL 6.87e-02 0.0957 0.0523 0.735 CD8_CTL L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.84e-01 -0.102 0.0949 0.735 CD8_CTL L2
ENSG00000111145 ELK3 418129 sc-eQTL 3.09e-01 -0.0882 0.0864 0.735 CD8_CTL L2
ENSG00000139343 SNRPF 753576 sc-eQTL 6.23e-01 -0.0392 0.0796 0.735 CD8_CTL L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 8.40e-01 -0.018 0.0893 0.735 CD8_CTL L2
ENSG00000059758 CDK17 212024 sc-eQTL 2.77e-01 0.0677 0.0621 0.735 CD8_Naive L2
ENSG00000111144 LTA4H 568984 sc-eQTL 4.69e-01 -0.0541 0.0745 0.735 CD8_Naive L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.50e-01 -0.0252 0.0789 0.735 CD8_Naive L2
ENSG00000139343 SNRPF 753576 sc-eQTL 4.45e-01 0.0543 0.0709 0.735 CD8_Naive L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.96e-01 -0.109 0.0841 0.735 CD8_Naive L2
ENSG00000059758 CDK17 212024 sc-eQTL 1.12e-01 0.109 0.068 0.731 CD8_TCM L2
ENSG00000111144 LTA4H 568984 sc-eQTL 5.05e-01 0.0672 0.101 0.731 CD8_TCM L2
ENSG00000111145 ELK3 418129 sc-eQTL 2.61e-01 0.0957 0.085 0.731 CD8_TCM L2
ENSG00000139343 SNRPF 753576 sc-eQTL 2.17e-01 0.121 0.0978 0.731 CD8_TCM L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 8.82e-02 -0.163 0.0954 0.731 CD8_TCM L2
ENSG00000059758 CDK17 212024 sc-eQTL 2.95e-02 0.182 0.0828 0.726 CD8_TEM L2
ENSG00000111144 LTA4H 568984 sc-eQTL 5.36e-01 0.0636 0.103 0.726 CD8_TEM L2
ENSG00000111145 ELK3 418129 sc-eQTL 8.89e-01 -0.014 0.101 0.726 CD8_TEM L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.01e-01 -0.153 0.0931 0.726 CD8_TEM L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 2.56e-01 -0.116 0.101 0.726 CD8_TEM L2
ENSG00000059758 CDK17 212024 sc-eQTL 5.77e-01 0.0317 0.0567 0.736 MAIT L2
ENSG00000074527 NTN4 821352 sc-eQTL 7.98e-01 0.0196 0.0765 0.736 MAIT L2
ENSG00000111144 LTA4H 568984 sc-eQTL 6.30e-01 -0.0422 0.0876 0.736 MAIT L2
ENSG00000111145 ELK3 418129 sc-eQTL 2.85e-01 -0.0786 0.0734 0.736 MAIT L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.01e-01 -0.139 0.0847 0.736 MAIT L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.17e-01 -0.15 0.0952 0.736 MAIT L2
ENSG00000188596 CFAP54 122933 sc-eQTL 6.21e-01 -0.047 0.0948 0.736 MAIT L2
ENSG00000059758 CDK17 212024 sc-eQTL 2.23e-02 0.134 0.0583 0.738 NK_CD56bright L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.98e-01 -0.0908 0.0871 0.738 NK_CD56bright L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.80e-01 0.0514 0.0926 0.738 NK_CD56bright L2
ENSG00000139343 SNRPF 753576 sc-eQTL 5.16e-01 0.0629 0.0968 0.738 NK_CD56bright L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 9.02e-01 0.012 0.0978 0.738 NK_CD56bright L2
ENSG00000059758 CDK17 212024 sc-eQTL 3.83e-01 0.0443 0.0507 0.739 NK_CD56dim L2
ENSG00000111144 LTA4H 568984 sc-eQTL 6.55e-01 -0.0411 0.0917 0.739 NK_CD56dim L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.37e-01 0.0273 0.0812 0.739 NK_CD56dim L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.57e-01 -0.109 0.0769 0.739 NK_CD56dim L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 3.26e-01 0.0874 0.0888 0.739 NK_CD56dim L2
ENSG00000059758 CDK17 212024 sc-eQTL 3.21e-01 -0.0809 0.0814 0.744 NK_HLA L2
ENSG00000111144 LTA4H 568984 sc-eQTL 6.56e-01 -0.0477 0.107 0.744 NK_HLA L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.38e-01 -0.0612 0.0991 0.744 NK_HLA L2
ENSG00000139343 SNRPF 753576 sc-eQTL 7.85e-02 0.181 0.103 0.744 NK_HLA L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.42e-01 0.144 0.0973 0.744 NK_HLA L2
ENSG00000059758 CDK17 212024 sc-eQTL 4.27e-01 0.0442 0.0556 0.739 NK_cytokine L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.01e-01 -0.12 0.0937 0.739 NK_cytokine L2
ENSG00000111145 ELK3 418129 sc-eQTL 6.85e-01 -0.0366 0.09 0.739 NK_cytokine L2
ENSG00000139343 SNRPF 753576 sc-eQTL 4.52e-01 0.0575 0.0762 0.739 NK_cytokine L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 7.13e-01 0.0347 0.0943 0.739 NK_cytokine L2
ENSG00000059758 CDK17 212024 sc-eQTL 5.27e-01 0.0642 0.101 0.726 PB L2
ENSG00000111144 LTA4H 568984 sc-eQTL 3.69e-01 -0.0804 0.0891 0.726 PB L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.89e-02 0.215 0.113 0.726 PB L2
ENSG00000139343 SNRPF 753576 sc-eQTL 9.17e-01 0.0117 0.112 0.726 PB L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 3.06e-01 -0.136 0.132 0.726 PB L2
ENSG00000059758 CDK17 212024 sc-eQTL 7.74e-01 0.018 0.0628 0.733 Pro_T L2
ENSG00000074527 NTN4 821352 sc-eQTL 7.54e-01 0.0221 0.0705 0.733 Pro_T L2
ENSG00000111144 LTA4H 568984 sc-eQTL 9.53e-01 -0.00491 0.0829 0.733 Pro_T L2
ENSG00000111145 ELK3 418129 sc-eQTL 6.89e-02 -0.182 0.0995 0.733 Pro_T L2
ENSG00000139343 SNRPF 753576 sc-eQTL 7.08e-01 -0.0237 0.0632 0.733 Pro_T L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.54e-01 -0.0413 0.0918 0.733 Pro_T L2
ENSG00000188596 CFAP54 122933 sc-eQTL 5.67e-01 0.0425 0.0742 0.733 Pro_T L2
ENSG00000059758 CDK17 212024 sc-eQTL 1.91e-01 -0.0885 0.0674 0.735 Treg L2
ENSG00000111144 LTA4H 568984 sc-eQTL 5.22e-01 0.055 0.0857 0.735 Treg L2
ENSG00000111145 ELK3 418129 sc-eQTL 6.90e-01 -0.031 0.0777 0.735 Treg L2
ENSG00000139343 SNRPF 753576 sc-eQTL 5.91e-01 0.0484 0.0899 0.735 Treg L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.30e-01 -0.152 0.0999 0.735 Treg L2
ENSG00000059758 CDK17 212024 sc-eQTL 3.48e-01 0.0787 0.0836 0.732 cDC L2
ENSG00000084110 HAL 616139 sc-eQTL 6.22e-01 -0.043 0.087 0.732 cDC L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.08e-02 0.172 0.0736 0.732 cDC L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.35e-01 -0.0334 0.0985 0.732 cDC L2
ENSG00000139343 SNRPF 753576 sc-eQTL 8.26e-01 0.0182 0.0825 0.732 cDC L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 8.31e-01 -0.0215 0.1 0.732 cDC L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 4.84e-01 0.0593 0.0846 0.732 cDC L2
ENSG00000059758 CDK17 212024 sc-eQTL 8.55e-01 -0.0133 0.0729 0.735 cMono_IL1B L2
ENSG00000084110 HAL 616139 sc-eQTL 5.89e-01 0.043 0.0795 0.735 cMono_IL1B L2
ENSG00000111144 LTA4H 568984 sc-eQTL 1.62e-01 0.12 0.0855 0.735 cMono_IL1B L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.67e-01 -0.0196 0.0662 0.735 cMono_IL1B L2
ENSG00000139343 SNRPF 753576 sc-eQTL 3.05e-01 -0.0701 0.0681 0.735 cMono_IL1B L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 5.47e-01 0.0567 0.094 0.735 cMono_IL1B L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 4.06e-01 0.0729 0.0876 0.735 cMono_IL1B L2
ENSG00000059758 CDK17 212024 sc-eQTL 8.82e-01 0.0123 0.0831 0.735 cMono_S100A L2
ENSG00000084110 HAL 616139 sc-eQTL 4.28e-02 0.188 0.0924 0.735 cMono_S100A L2
ENSG00000111144 LTA4H 568984 sc-eQTL 3.97e-01 0.0789 0.093 0.735 cMono_S100A L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.84e-01 0.0416 0.0758 0.735 cMono_S100A L2
ENSG00000139343 SNRPF 753576 sc-eQTL 8.69e-01 0.0124 0.075 0.735 cMono_S100A L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.74e-01 0.0426 0.101 0.735 cMono_S100A L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 4.11e-01 -0.0784 0.0951 0.735 cMono_S100A L2
ENSG00000059758 CDK17 212024 sc-eQTL 8.33e-01 0.0169 0.0799 0.742 gdT L2
ENSG00000074527 NTN4 821352 sc-eQTL 6.46e-01 0.0421 0.0916 0.742 gdT L2
ENSG00000111144 LTA4H 568984 sc-eQTL 2.64e-01 -0.133 0.119 0.742 gdT L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.30e-01 -0.0382 0.111 0.742 gdT L2
ENSG00000139343 SNRPF 753576 sc-eQTL 7.34e-02 0.19 0.106 0.742 gdT L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 4.39e-01 -0.0913 0.118 0.742 gdT L2
ENSG00000188596 CFAP54 122933 sc-eQTL 8.87e-01 0.0147 0.103 0.742 gdT L2
ENSG00000059758 CDK17 212024 sc-eQTL 7.76e-01 -0.0269 0.0946 0.729 intMono L2
ENSG00000084110 HAL 616139 sc-eQTL 6.78e-01 -0.0398 0.0956 0.729 intMono L2
ENSG00000111144 LTA4H 568984 sc-eQTL 8.64e-01 0.0168 0.0981 0.729 intMono L2
ENSG00000111145 ELK3 418129 sc-eQTL 7.72e-01 0.0254 0.0874 0.729 intMono L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.68e-01 0.128 0.093 0.729 intMono L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 2.28e-01 0.117 0.0967 0.729 intMono L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 1.44e-01 0.143 0.0971 0.729 intMono L2
ENSG00000059758 CDK17 212024 sc-eQTL 2.16e-01 -0.0944 0.0761 0.729 ncMono L2
ENSG00000084110 HAL 616139 sc-eQTL 4.29e-01 0.0675 0.0852 0.729 ncMono L2
ENSG00000111144 LTA4H 568984 sc-eQTL 9.12e-01 0.0105 0.0951 0.729 ncMono L2
ENSG00000111145 ELK3 418129 sc-eQTL 5.71e-01 0.0463 0.0816 0.729 ncMono L2
ENSG00000139343 SNRPF 753576 sc-eQTL 2.77e-04 -0.299 0.0807 0.729 ncMono L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 1.04e-01 0.144 0.088 0.729 ncMono L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 6.83e-01 -0.0413 0.101 0.729 ncMono L2
ENSG00000059758 CDK17 212024 sc-eQTL 8.40e-01 0.0202 0.1 0.74 pDC L2
ENSG00000084110 HAL 616139 sc-eQTL 9.13e-01 -0.00921 0.0844 0.74 pDC L2
ENSG00000111144 LTA4H 568984 sc-eQTL 1.33e-02 0.232 0.0927 0.74 pDC L2
ENSG00000111145 ELK3 418129 sc-eQTL 3.26e-02 0.246 0.114 0.74 pDC L2
ENSG00000139343 SNRPF 753576 sc-eQTL 1.12e-01 0.16 0.1 0.74 pDC L2
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.22e-01 -0.055 0.111 0.74 pDC L2
ENSG00000257715 AC007298.1 587181 sc-eQTL 3.94e-01 -0.0814 0.0952 0.74 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 212024 sc-eQTL 1.43e-03 0.204 0.063 0.735 B_Memory LOneK1K
ENSG00000111144 LTA4H 568984 sc-eQTL 5.58e-02 0.128 0.0665 0.735 B_Memory LOneK1K
ENSG00000111145 ELK3 418129 sc-eQTL 3.89e-01 0.066 0.0765 0.735 B_Memory LOneK1K
ENSG00000139343 SNRPF 753576 sc-eQTL 1.03e-01 0.121 0.0738 0.735 B_Memory LOneK1K
ENSG00000139350 NEDD1 -294719 sc-eQTL 9.40e-01 -0.00738 0.0974 0.735 B_Memory LOneK1K
ENSG00000059758 CDK17 212024 sc-eQTL 7.08e-02 0.0997 0.0549 0.735 B_Naive LOneK1K
ENSG00000111144 LTA4H 568984 sc-eQTL 5.93e-01 0.0333 0.0621 0.735 B_Naive LOneK1K
ENSG00000111145 ELK3 418129 sc-eQTL 3.83e-03 0.203 0.0694 0.735 B_Naive LOneK1K
ENSG00000139343 SNRPF 753576 sc-eQTL 4.47e-01 0.0542 0.0712 0.735 B_Naive LOneK1K
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.78e-01 0.0393 0.0943 0.735 B_Naive LOneK1K
ENSG00000059758 CDK17 212024 sc-eQTL 9.26e-01 0.00612 0.0658 0.735 CD14_Mono LOneK1K
ENSG00000084110 HAL 616139 sc-eQTL 1.10e-01 0.127 0.0792 0.735 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 568984 sc-eQTL 2.77e-01 0.0951 0.0873 0.735 CD14_Mono LOneK1K
ENSG00000111145 ELK3 418129 sc-eQTL 8.75e-01 0.00994 0.0632 0.735 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 753576 sc-eQTL 3.54e-01 -0.0565 0.0609 0.735 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -294719 sc-eQTL 5.97e-01 0.0506 0.0956 0.735 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 587181 sc-eQTL 8.14e-01 -0.0208 0.0886 0.735 CD14_Mono LOneK1K
ENSG00000059758 CDK17 212024 sc-eQTL 2.90e-01 -0.0734 0.0692 0.737 CD16_Mono LOneK1K
ENSG00000084110 HAL 616139 sc-eQTL 6.40e-01 0.0384 0.082 0.737 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 568984 sc-eQTL 7.00e-01 0.0351 0.0909 0.737 CD16_Mono LOneK1K
ENSG00000111145 ELK3 418129 sc-eQTL 4.42e-01 0.0517 0.0672 0.737 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 753576 sc-eQTL 1.87e-01 -0.0916 0.0691 0.737 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -294719 sc-eQTL 6.54e-02 0.164 0.0883 0.737 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 587181 sc-eQTL 9.06e-01 0.0112 0.0942 0.737 CD16_Mono LOneK1K
ENSG00000059758 CDK17 212024 sc-eQTL 5.36e-01 0.0295 0.0476 0.739 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 568984 sc-eQTL 2.76e-01 -0.0902 0.0826 0.739 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 418129 sc-eQTL 7.53e-01 0.0238 0.0758 0.739 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 753576 sc-eQTL 8.05e-01 0.016 0.0648 0.739 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -294719 sc-eQTL 4.54e-01 0.0606 0.0807 0.739 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -294719 eQTL 3.51e-11 0.169 0.0252 0.0 0.0 0.263

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -294719 3.06e-06 3.09e-06 6.64e-07 1.96e-06 1.51e-06 8.5e-07 2.48e-06 1.18e-06 4.64e-06 2.42e-06 3.34e-06 3.21e-06 4.26e-06 1.25e-06 1.3e-06 3.26e-06 1.81e-06 2.38e-06 1.55e-06 1.09e-06 3.01e-06 4.05e-06 3.37e-06 1.65e-06 4.08e-06 1.96e-06 2.59e-06 1.44e-06 3.82e-06 2.2e-06 1.93e-06 4.46e-07 7.32e-07 1.66e-06 1.73e-06 1.16e-06 1.06e-06 4.39e-07 9.46e-07 4.29e-07 6.17e-07 3.29e-06 3.65e-07 1.62e-07 5.77e-07 6.92e-07 1.13e-06 6.82e-07 6.13e-07