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Genes within 1Mb (chr12:96602165:C:CT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 201685 sc-eQTL 1.56e-01 0.113 0.0794 0.912 B L1
ENSG00000111144 LTA4H 558645 sc-eQTL 6.97e-01 -0.0386 0.099 0.912 B L1
ENSG00000111145 ELK3 407790 sc-eQTL 2.15e-01 0.131 0.105 0.912 B L1
ENSG00000139343 SNRPF 743237 sc-eQTL 9.05e-01 0.0115 0.0958 0.912 B L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 4.20e-01 0.113 0.14 0.912 B L1
ENSG00000059758 CDK17 201685 sc-eQTL 3.48e-01 -0.0621 0.066 0.912 CD4T L1
ENSG00000111144 LTA4H 558645 sc-eQTL 2.18e-01 0.112 0.0905 0.912 CD4T L1
ENSG00000111145 ELK3 407790 sc-eQTL 2.90e-01 -0.104 0.0982 0.912 CD4T L1
ENSG00000139343 SNRPF 743237 sc-eQTL 9.36e-01 -0.00687 0.086 0.912 CD4T L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 5.73e-01 0.0597 0.106 0.912 CD4T L1
ENSG00000059758 CDK17 201685 sc-eQTL 7.29e-01 0.0235 0.0679 0.912 CD8T L1
ENSG00000111144 LTA4H 558645 sc-eQTL 1.63e-01 -0.102 0.0725 0.912 CD8T L1
ENSG00000111145 ELK3 407790 sc-eQTL 9.82e-01 0.00241 0.11 0.912 CD8T L1
ENSG00000139343 SNRPF 743237 sc-eQTL 8.04e-01 -0.0223 0.0899 0.912 CD8T L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 9.26e-01 0.0112 0.119 0.912 CD8T L1
ENSG00000059758 CDK17 201685 sc-eQTL 4.22e-01 -0.0992 0.123 0.912 DC L1
ENSG00000084110 HAL 605800 sc-eQTL 3.63e-01 0.128 0.14 0.912 DC L1
ENSG00000111144 LTA4H 558645 sc-eQTL 8.92e-01 0.0156 0.115 0.912 DC L1
ENSG00000111145 ELK3 407790 sc-eQTL 1.95e-01 0.182 0.14 0.912 DC L1
ENSG00000139343 SNRPF 743237 sc-eQTL 5.11e-01 -0.0769 0.117 0.912 DC L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.14e-01 -0.151 0.15 0.912 DC L1
ENSG00000257715 AC007298.1 576842 sc-eQTL 8.02e-01 0.0341 0.136 0.912 DC L1
ENSG00000059758 CDK17 201685 sc-eQTL 3.76e-01 -0.0897 0.101 0.912 Mono L1
ENSG00000084110 HAL 605800 sc-eQTL 5.64e-01 -0.0736 0.127 0.912 Mono L1
ENSG00000111144 LTA4H 558645 sc-eQTL 4.61e-01 -0.106 0.144 0.912 Mono L1
ENSG00000111145 ELK3 407790 sc-eQTL 9.01e-01 0.012 0.0967 0.912 Mono L1
ENSG00000139343 SNRPF 743237 sc-eQTL 4.93e-01 -0.0626 0.091 0.912 Mono L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.80e-01 0.151 0.14 0.912 Mono L1
ENSG00000257715 AC007298.1 576842 sc-eQTL 1.08e-01 -0.217 0.135 0.912 Mono L1
ENSG00000059758 CDK17 201685 sc-eQTL 7.99e-02 -0.134 0.0759 0.912 NK L1
ENSG00000111144 LTA4H 558645 sc-eQTL 6.58e-01 0.0576 0.13 0.912 NK L1
ENSG00000111145 ELK3 407790 sc-eQTL 9.78e-01 0.00338 0.123 0.912 NK L1
ENSG00000139343 SNRPF 743237 sc-eQTL 1.64e-01 -0.142 0.102 0.912 NK L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 5.55e-01 0.0763 0.129 0.912 NK L1
ENSG00000059758 CDK17 201685 sc-eQTL 4.55e-01 -0.0468 0.0625 0.912 Other_T L1
ENSG00000074527 NTN4 811013 sc-eQTL 3.75e-01 -0.103 0.116 0.912 Other_T L1
ENSG00000111144 LTA4H 558645 sc-eQTL 1.77e-02 0.309 0.129 0.912 Other_T L1
ENSG00000111145 ELK3 407790 sc-eQTL 1.70e-01 -0.14 0.102 0.912 Other_T L1
ENSG00000139343 SNRPF 743237 sc-eQTL 4.36e-02 -0.191 0.094 0.912 Other_T L1
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.50e-01 -0.135 0.144 0.912 Other_T L1
ENSG00000188596 CFAP54 112594 sc-eQTL 5.98e-02 0.281 0.148 0.912 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 201685 sc-eQTL 4.80e-01 -0.0999 0.141 0.908 B_Activated L2
ENSG00000111144 LTA4H 558645 sc-eQTL 8.71e-01 0.0259 0.16 0.908 B_Activated L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.68e-01 0.233 0.168 0.908 B_Activated L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.37e-01 -0.124 0.159 0.908 B_Activated L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 9.91e-02 -0.275 0.166 0.908 B_Activated L2
ENSG00000059758 CDK17 201685 sc-eQTL 2.71e-01 0.135 0.122 0.912 B_Intermediate L2
ENSG00000111144 LTA4H 558645 sc-eQTL 6.08e-01 0.061 0.119 0.912 B_Intermediate L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.10e-01 0.0152 0.134 0.912 B_Intermediate L2
ENSG00000139343 SNRPF 743237 sc-eQTL 8.53e-01 0.0247 0.133 0.912 B_Intermediate L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 7.66e-01 -0.0465 0.156 0.912 B_Intermediate L2
ENSG00000059758 CDK17 201685 sc-eQTL 7.39e-01 0.0394 0.118 0.912 B_Memory L2
ENSG00000111144 LTA4H 558645 sc-eQTL 4.89e-01 0.0944 0.136 0.912 B_Memory L2
ENSG00000111145 ELK3 407790 sc-eQTL 3.15e-01 0.134 0.134 0.912 B_Memory L2
ENSG00000139343 SNRPF 743237 sc-eQTL 3.51e-01 -0.132 0.142 0.912 B_Memory L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 5.70e-01 -0.0893 0.157 0.912 B_Memory L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.46e-01 0.0601 0.0992 0.912 B_Naive1 L2
ENSG00000111144 LTA4H 558645 sc-eQTL 4.26e-01 -0.0829 0.104 0.912 B_Naive1 L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.18e-01 0.192 0.122 0.912 B_Naive1 L2
ENSG00000139343 SNRPF 743237 sc-eQTL 8.71e-01 -0.0194 0.12 0.912 B_Naive1 L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 5.14e-02 0.298 0.152 0.912 B_Naive1 L2
ENSG00000059758 CDK17 201685 sc-eQTL 9.44e-01 -0.00881 0.124 0.912 B_Naive2 L2
ENSG00000111144 LTA4H 558645 sc-eQTL 6.48e-01 0.0538 0.118 0.912 B_Naive2 L2
ENSG00000111145 ELK3 407790 sc-eQTL 4.04e-01 0.116 0.139 0.912 B_Naive2 L2
ENSG00000139343 SNRPF 743237 sc-eQTL 6.60e-01 -0.0607 0.138 0.912 B_Naive2 L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 4.84e-01 -0.115 0.164 0.912 B_Naive2 L2
ENSG00000059758 CDK17 201685 sc-eQTL 2.46e-01 0.135 0.116 0.909 CD4_CTL L2
ENSG00000111144 LTA4H 558645 sc-eQTL 6.47e-02 0.302 0.163 0.909 CD4_CTL L2
ENSG00000111145 ELK3 407790 sc-eQTL 2.55e-01 -0.189 0.166 0.909 CD4_CTL L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.31e-01 -0.114 0.144 0.909 CD4_CTL L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 5.25e-01 -0.106 0.167 0.909 CD4_CTL L2
ENSG00000059758 CDK17 201685 sc-eQTL 2.75e-01 -0.0789 0.0721 0.912 CD4_Naive L2
ENSG00000111144 LTA4H 558645 sc-eQTL 8.40e-02 0.18 0.104 0.912 CD4_Naive L2
ENSG00000111145 ELK3 407790 sc-eQTL 2.60e-01 -0.118 0.104 0.912 CD4_Naive L2
ENSG00000139343 SNRPF 743237 sc-eQTL 6.92e-01 -0.0369 0.0929 0.912 CD4_Naive L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.30e-01 0.112 0.114 0.912 CD4_Naive L2
ENSG00000059758 CDK17 201685 sc-eQTL 6.31e-01 0.0339 0.0705 0.912 CD4_TCM L2
ENSG00000111144 LTA4H 558645 sc-eQTL 9.52e-02 0.199 0.119 0.912 CD4_TCM L2
ENSG00000111145 ELK3 407790 sc-eQTL 3.08e-01 -0.12 0.118 0.912 CD4_TCM L2
ENSG00000139343 SNRPF 743237 sc-eQTL 2.99e-01 0.1 0.0964 0.912 CD4_TCM L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 6.05e-01 0.0683 0.132 0.912 CD4_TCM L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.89e-01 0.0465 0.086 0.912 CD4_TEM L2
ENSG00000111144 LTA4H 558645 sc-eQTL 7.17e-02 -0.239 0.132 0.912 CD4_TEM L2
ENSG00000111145 ELK3 407790 sc-eQTL 6.03e-01 0.0642 0.123 0.912 CD4_TEM L2
ENSG00000139343 SNRPF 743237 sc-eQTL 7.39e-01 0.0432 0.129 0.912 CD4_TEM L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.22e-01 0.152 0.153 0.912 CD4_TEM L2
ENSG00000059758 CDK17 201685 sc-eQTL 7.58e-01 0.0258 0.0838 0.912 CD8_CTL L2
ENSG00000111144 LTA4H 558645 sc-eQTL 6.21e-01 -0.075 0.151 0.912 CD8_CTL L2
ENSG00000111145 ELK3 407790 sc-eQTL 4.51e-01 0.104 0.138 0.912 CD8_CTL L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.64e-01 -0.0927 0.127 0.912 CD8_CTL L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.82e-01 0.153 0.142 0.912 CD8_CTL L2
ENSG00000059758 CDK17 201685 sc-eQTL 7.37e-01 -0.0337 0.1 0.912 CD8_Naive L2
ENSG00000111144 LTA4H 558645 sc-eQTL 3.55e-01 -0.111 0.12 0.912 CD8_Naive L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.77e-01 -0.00372 0.127 0.912 CD8_Naive L2
ENSG00000139343 SNRPF 743237 sc-eQTL 8.55e-02 -0.196 0.113 0.912 CD8_Naive L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 7.12e-01 -0.0503 0.136 0.912 CD8_Naive L2
ENSG00000059758 CDK17 201685 sc-eQTL 6.45e-01 0.0504 0.109 0.91 CD8_TCM L2
ENSG00000111144 LTA4H 558645 sc-eQTL 2.27e-01 0.194 0.16 0.91 CD8_TCM L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.59e-01 0.00699 0.136 0.91 CD8_TCM L2
ENSG00000139343 SNRPF 743237 sc-eQTL 1.57e-01 0.221 0.156 0.91 CD8_TCM L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 1.85e-01 -0.203 0.153 0.91 CD8_TCM L2
ENSG00000059758 CDK17 201685 sc-eQTL 6.10e-02 0.246 0.131 0.906 CD8_TEM L2
ENSG00000111144 LTA4H 558645 sc-eQTL 7.35e-01 0.0547 0.161 0.906 CD8_TEM L2
ENSG00000111145 ELK3 407790 sc-eQTL 5.35e-01 0.0985 0.159 0.906 CD8_TEM L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.72e-01 -0.106 0.147 0.906 CD8_TEM L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 9.37e-01 -0.0127 0.16 0.906 CD8_TEM L2
ENSG00000059758 CDK17 201685 sc-eQTL 3.93e-01 0.0766 0.0895 0.911 MAIT L2
ENSG00000074527 NTN4 811013 sc-eQTL 6.75e-01 -0.0508 0.121 0.911 MAIT L2
ENSG00000111144 LTA4H 558645 sc-eQTL 2.41e-01 0.162 0.138 0.911 MAIT L2
ENSG00000111145 ELK3 407790 sc-eQTL 2.24e-01 -0.141 0.116 0.911 MAIT L2
ENSG00000139343 SNRPF 743237 sc-eQTL 8.91e-03 -0.35 0.132 0.911 MAIT L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 8.76e-01 0.0236 0.151 0.911 MAIT L2
ENSG00000188596 CFAP54 112594 sc-eQTL 3.33e-01 0.145 0.149 0.911 MAIT L2
ENSG00000059758 CDK17 201685 sc-eQTL 3.85e-01 0.0819 0.0941 0.911 NK_CD56bright L2
ENSG00000111144 LTA4H 558645 sc-eQTL 7.72e-01 -0.0404 0.139 0.911 NK_CD56bright L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.36e-01 0.0119 0.148 0.911 NK_CD56bright L2
ENSG00000139343 SNRPF 743237 sc-eQTL 7.45e-02 -0.275 0.154 0.911 NK_CD56bright L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 9.22e-01 0.0154 0.156 0.911 NK_CD56bright L2
ENSG00000059758 CDK17 201685 sc-eQTL 1.82e-01 -0.109 0.0814 0.912 NK_CD56dim L2
ENSG00000111144 LTA4H 558645 sc-eQTL 9.98e-01 0.000305 0.148 0.912 NK_CD56dim L2
ENSG00000111145 ELK3 407790 sc-eQTL 5.51e-01 -0.0781 0.131 0.912 NK_CD56dim L2
ENSG00000139343 SNRPF 743237 sc-eQTL 5.94e-02 -0.234 0.123 0.912 NK_CD56dim L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 9.25e-01 -0.0135 0.143 0.912 NK_CD56dim L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.05e-02 -0.249 0.127 0.916 NK_HLA L2
ENSG00000111144 LTA4H 558645 sc-eQTL 1.42e-01 0.246 0.167 0.916 NK_HLA L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.19e-01 -0.0158 0.155 0.916 NK_HLA L2
ENSG00000139343 SNRPF 743237 sc-eQTL 2.25e-01 -0.197 0.161 0.916 NK_HLA L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 1.38e-01 0.227 0.152 0.916 NK_HLA L2
ENSG00000059758 CDK17 201685 sc-eQTL 4.10e-01 -0.0735 0.089 0.912 NK_cytokine L2
ENSG00000111144 LTA4H 558645 sc-eQTL 8.75e-01 -0.0237 0.151 0.912 NK_cytokine L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.54e-01 0.00833 0.144 0.912 NK_cytokine L2
ENSG00000139343 SNRPF 743237 sc-eQTL 1.30e-01 -0.185 0.122 0.912 NK_cytokine L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.71e-01 0.135 0.151 0.912 NK_cytokine L2
ENSG00000059758 CDK17 201685 sc-eQTL 6.15e-01 0.0842 0.167 0.919 PB L2
ENSG00000111144 LTA4H 558645 sc-eQTL 4.04e-01 0.123 0.147 0.919 PB L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.64e-01 0.262 0.187 0.919 PB L2
ENSG00000139343 SNRPF 743237 sc-eQTL 9.98e-01 -0.00044 0.184 0.919 PB L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 8.22e-01 -0.0493 0.219 0.919 PB L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.45e-01 0.0604 0.0996 0.911 Pro_T L2
ENSG00000074527 NTN4 811013 sc-eQTL 4.65e-01 0.0819 0.112 0.911 Pro_T L2
ENSG00000111144 LTA4H 558645 sc-eQTL 1.26e-01 0.201 0.131 0.911 Pro_T L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.26e-01 -0.243 0.158 0.911 Pro_T L2
ENSG00000139343 SNRPF 743237 sc-eQTL 7.73e-01 0.0289 0.1 0.911 Pro_T L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 6.28e-01 -0.0707 0.146 0.911 Pro_T L2
ENSG00000188596 CFAP54 112594 sc-eQTL 3.53e-02 0.247 0.117 0.911 Pro_T L2
ENSG00000059758 CDK17 201685 sc-eQTL 3.81e-01 -0.0949 0.108 0.912 Treg L2
ENSG00000111144 LTA4H 558645 sc-eQTL 1.30e-01 0.208 0.136 0.912 Treg L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.65e-01 -0.172 0.124 0.912 Treg L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.48e-01 -0.109 0.144 0.912 Treg L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.40e-02 -0.361 0.159 0.912 Treg L2
ENSG00000059758 CDK17 201685 sc-eQTL 9.59e-02 -0.232 0.138 0.915 cDC L2
ENSG00000084110 HAL 605800 sc-eQTL 4.44e-01 0.111 0.145 0.915 cDC L2
ENSG00000111144 LTA4H 558645 sc-eQTL 7.83e-01 0.0342 0.124 0.915 cDC L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.12e-01 0.26 0.163 0.915 cDC L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.32e-01 -0.108 0.137 0.915 cDC L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.07e-01 0.211 0.166 0.915 cDC L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 3.26e-01 -0.138 0.141 0.915 cDC L2
ENSG00000059758 CDK17 201685 sc-eQTL 1.92e-01 -0.152 0.116 0.912 cMono_IL1B L2
ENSG00000084110 HAL 605800 sc-eQTL 1.61e-01 -0.178 0.127 0.912 cMono_IL1B L2
ENSG00000111144 LTA4H 558645 sc-eQTL 8.12e-01 -0.0327 0.137 0.912 cMono_IL1B L2
ENSG00000111145 ELK3 407790 sc-eQTL 9.74e-01 -0.00347 0.106 0.912 cMono_IL1B L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.64e-01 -0.0799 0.109 0.912 cMono_IL1B L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 1.97e-01 0.194 0.15 0.912 cMono_IL1B L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 3.46e-01 -0.132 0.14 0.912 cMono_IL1B L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.29e-01 -0.0831 0.132 0.912 cMono_S100A L2
ENSG00000084110 HAL 605800 sc-eQTL 2.99e-01 0.154 0.148 0.912 cMono_S100A L2
ENSG00000111144 LTA4H 558645 sc-eQTL 6.01e-01 -0.0774 0.148 0.912 cMono_S100A L2
ENSG00000111145 ELK3 407790 sc-eQTL 5.44e-01 0.073 0.12 0.912 cMono_S100A L2
ENSG00000139343 SNRPF 743237 sc-eQTL 8.30e-01 -0.0256 0.119 0.912 cMono_S100A L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 6.23e-01 0.079 0.161 0.912 cMono_S100A L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 4.54e-02 -0.301 0.15 0.912 cMono_S100A L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.44e-01 -0.0811 0.134 0.915 gdT L2
ENSG00000074527 NTN4 811013 sc-eQTL 6.11e-01 -0.0781 0.153 0.915 gdT L2
ENSG00000111144 LTA4H 558645 sc-eQTL 9.57e-01 0.0108 0.2 0.915 gdT L2
ENSG00000111145 ELK3 407790 sc-eQTL 7.40e-01 -0.0615 0.185 0.915 gdT L2
ENSG00000139343 SNRPF 743237 sc-eQTL 4.69e-01 0.13 0.178 0.915 gdT L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 1.74e-01 -0.268 0.196 0.915 gdT L2
ENSG00000188596 CFAP54 112594 sc-eQTL 4.73e-01 -0.124 0.173 0.915 gdT L2
ENSG00000059758 CDK17 201685 sc-eQTL 2.89e-01 0.159 0.149 0.909 intMono L2
ENSG00000084110 HAL 605800 sc-eQTL 3.96e-02 -0.31 0.15 0.909 intMono L2
ENSG00000111144 LTA4H 558645 sc-eQTL 9.91e-01 -0.00184 0.155 0.909 intMono L2
ENSG00000111145 ELK3 407790 sc-eQTL 4.38e-01 -0.107 0.138 0.909 intMono L2
ENSG00000139343 SNRPF 743237 sc-eQTL 2.18e-01 0.182 0.147 0.909 intMono L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 6.23e-01 0.0756 0.153 0.909 intMono L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 5.25e-01 0.098 0.154 0.909 intMono L2
ENSG00000059758 CDK17 201685 sc-eQTL 5.76e-02 -0.225 0.118 0.912 ncMono L2
ENSG00000084110 HAL 605800 sc-eQTL 4.28e-01 0.106 0.133 0.912 ncMono L2
ENSG00000111144 LTA4H 558645 sc-eQTL 9.04e-01 0.0179 0.148 0.912 ncMono L2
ENSG00000111145 ELK3 407790 sc-eQTL 6.60e-01 0.0561 0.127 0.912 ncMono L2
ENSG00000139343 SNRPF 743237 sc-eQTL 2.55e-02 -0.289 0.128 0.912 ncMono L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.23e-01 0.168 0.138 0.912 ncMono L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 3.67e-01 -0.142 0.157 0.912 ncMono L2
ENSG00000059758 CDK17 201685 sc-eQTL 9.39e-01 -0.0132 0.172 0.924 pDC L2
ENSG00000084110 HAL 605800 sc-eQTL 8.60e-01 -0.0257 0.145 0.924 pDC L2
ENSG00000111144 LTA4H 558645 sc-eQTL 4.69e-01 0.118 0.162 0.924 pDC L2
ENSG00000111145 ELK3 407790 sc-eQTL 1.99e-01 0.256 0.198 0.924 pDC L2
ENSG00000139343 SNRPF 743237 sc-eQTL 6.05e-01 0.09 0.174 0.924 pDC L2
ENSG00000139350 NEDD1 -305058 sc-eQTL 1.24e-01 -0.294 0.19 0.924 pDC L2
ENSG00000257715 AC007298.1 576842 sc-eQTL 9.07e-01 0.0191 0.164 0.924 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 201685 sc-eQTL 3.37e-01 0.0991 0.103 0.912 B_Memory LOneK1K
ENSG00000111144 LTA4H 558645 sc-eQTL 6.14e-01 0.0542 0.107 0.912 B_Memory LOneK1K
ENSG00000111145 ELK3 407790 sc-eQTL 3.59e-01 0.112 0.122 0.912 B_Memory LOneK1K
ENSG00000139343 SNRPF 743237 sc-eQTL 7.59e-01 -0.0365 0.119 0.912 B_Memory LOneK1K
ENSG00000139350 NEDD1 -305058 sc-eQTL 3.31e-01 -0.152 0.156 0.912 B_Memory LOneK1K
ENSG00000059758 CDK17 201685 sc-eQTL 5.80e-01 0.049 0.0884 0.912 B_Naive LOneK1K
ENSG00000111144 LTA4H 558645 sc-eQTL 3.85e-01 -0.0864 0.0992 0.912 B_Naive LOneK1K
ENSG00000111145 ELK3 407790 sc-eQTL 1.23e-01 0.174 0.112 0.912 B_Naive LOneK1K
ENSG00000139343 SNRPF 743237 sc-eQTL 9.10e-01 -0.0129 0.114 0.912 B_Naive LOneK1K
ENSG00000139350 NEDD1 -305058 sc-eQTL 2.86e-01 0.161 0.15 0.912 B_Naive LOneK1K
ENSG00000059758 CDK17 201685 sc-eQTL 1.59e-01 -0.148 0.105 0.912 CD14_Mono LOneK1K
ENSG00000084110 HAL 605800 sc-eQTL 7.90e-01 -0.0342 0.128 0.912 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 558645 sc-eQTL 7.60e-01 -0.0429 0.14 0.912 CD14_Mono LOneK1K
ENSG00000111145 ELK3 407790 sc-eQTL 8.09e-01 0.0246 0.101 0.912 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 743237 sc-eQTL 6.75e-01 -0.041 0.0978 0.912 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -305058 sc-eQTL 4.23e-01 0.123 0.153 0.912 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 576842 sc-eQTL 1.51e-01 -0.204 0.141 0.912 CD14_Mono LOneK1K
ENSG00000059758 CDK17 201685 sc-eQTL 3.77e-01 -0.0977 0.11 0.912 CD16_Mono LOneK1K
ENSG00000084110 HAL 605800 sc-eQTL 4.92e-01 -0.09 0.131 0.912 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 558645 sc-eQTL 9.55e-01 -0.00817 0.145 0.912 CD16_Mono LOneK1K
ENSG00000111145 ELK3 407790 sc-eQTL 7.93e-01 0.0281 0.107 0.912 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 743237 sc-eQTL 7.37e-01 -0.0372 0.111 0.912 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -305058 sc-eQTL 4.98e-01 0.0962 0.142 0.912 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 576842 sc-eQTL 7.76e-01 -0.0428 0.15 0.912 CD16_Mono LOneK1K
ENSG00000059758 CDK17 201685 sc-eQTL 3.01e-02 -0.167 0.0763 0.912 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 558645 sc-eQTL 7.33e-01 0.0458 0.134 0.912 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 407790 sc-eQTL 9.35e-01 -0.0101 0.123 0.912 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 743237 sc-eQTL 1.08e-01 -0.169 0.104 0.912 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -305058 sc-eQTL 6.76e-01 0.0548 0.131 0.912 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -305058 eQTL 2.44e-07 0.204 0.0392 0.0 0.0 0.0878

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -305058 1.23e-06 1.01e-06 2.75e-07 1.27e-06 2.31e-07 6.05e-07 1.52e-06 9.07e-08 1.16e-06 2.37e-07 1.32e-06 4.55e-07 1.83e-06 2.63e-07 3.27e-07 3.79e-07 3.35e-07 5.31e-07 4.49e-07 6.8e-07 4.99e-07 1.36e-06 9.66e-07 2.92e-07 1.57e-06 2.32e-07 6.03e-07 4.59e-07 9.65e-07 1.22e-06 6.29e-07 4.32e-08 4.98e-08 4.16e-07 5.85e-07 2.58e-07 5.03e-07 1.9e-07 7.56e-08 2.83e-08 4.84e-08 1.62e-06 4.26e-07 2.06e-07 1.1e-07 2.28e-07 7.89e-08 0.0 5.76e-08