logo

Genes within 1Mb (chr12:96598106:C:CTAAACT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 197626 sc-eQTL 3.17e-04 0.176 0.0482 0.726 B L1
ENSG00000111144 LTA4H 554586 sc-eQTL 6.26e-01 0.0301 0.0617 0.726 B L1
ENSG00000111145 ELK3 403731 sc-eQTL 1.40e-02 0.16 0.0647 0.726 B L1
ENSG00000139343 SNRPF 739178 sc-eQTL 6.67e-02 0.109 0.0592 0.726 B L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 7.34e-01 0.0296 0.0871 0.726 B L1
ENSG00000059758 CDK17 197626 sc-eQTL 4.22e-01 0.0326 0.0405 0.726 CD4T L1
ENSG00000111144 LTA4H 554586 sc-eQTL 6.84e-01 0.0227 0.0557 0.726 CD4T L1
ENSG00000111145 ELK3 403731 sc-eQTL 1.54e-01 -0.0859 0.06 0.726 CD4T L1
ENSG00000139343 SNRPF 739178 sc-eQTL 2.65e-01 0.0588 0.0526 0.726 CD4T L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.08e-02 -0.165 0.0639 0.726 CD4T L1
ENSG00000059758 CDK17 197626 sc-eQTL 8.11e-02 0.0723 0.0412 0.726 CD8T L1
ENSG00000111144 LTA4H 554586 sc-eQTL 1.17e-01 -0.0699 0.0443 0.726 CD8T L1
ENSG00000111145 ELK3 403731 sc-eQTL 6.48e-01 -0.0307 0.0671 0.726 CD8T L1
ENSG00000139343 SNRPF 739178 sc-eQTL 7.99e-01 0.014 0.055 0.726 CD8T L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.27e-01 -0.111 0.0727 0.726 CD8T L1
ENSG00000059758 CDK17 197626 sc-eQTL 1.99e-01 0.0999 0.0776 0.725 DC L1
ENSG00000084110 HAL 601741 sc-eQTL 9.72e-01 0.00313 0.0886 0.725 DC L1
ENSG00000111144 LTA4H 554586 sc-eQTL 1.44e-02 0.176 0.0714 0.725 DC L1
ENSG00000111145 ELK3 403731 sc-eQTL 5.72e-01 0.0502 0.0887 0.725 DC L1
ENSG00000139343 SNRPF 739178 sc-eQTL 5.63e-01 0.0427 0.0738 0.725 DC L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.68e-02 -0.173 0.094 0.725 DC L1
ENSG00000257715 AC007298.1 572783 sc-eQTL 5.73e-01 0.0483 0.0855 0.725 DC L1
ENSG00000059758 CDK17 197626 sc-eQTL 5.63e-01 -0.036 0.062 0.726 Mono L1
ENSG00000084110 HAL 601741 sc-eQTL 1.44e-01 0.114 0.0778 0.726 Mono L1
ENSG00000111144 LTA4H 554586 sc-eQTL 5.34e-01 0.0549 0.0882 0.726 Mono L1
ENSG00000111145 ELK3 403731 sc-eQTL 8.09e-01 0.0144 0.0593 0.726 Mono L1
ENSG00000139343 SNRPF 739178 sc-eQTL 1.28e-01 -0.085 0.0556 0.726 Mono L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.88e-02 0.141 0.0853 0.726 Mono L1
ENSG00000257715 AC007298.1 572783 sc-eQTL 8.10e-01 -0.0201 0.0832 0.726 Mono L1
ENSG00000059758 CDK17 197626 sc-eQTL 3.27e-01 0.0454 0.0462 0.73 NK L1
ENSG00000111144 LTA4H 554586 sc-eQTL 2.08e-01 -0.0988 0.0783 0.73 NK L1
ENSG00000111145 ELK3 403731 sc-eQTL 5.47e-01 0.0449 0.0745 0.73 NK L1
ENSG00000139343 SNRPF 739178 sc-eQTL 6.75e-01 0.0259 0.0618 0.73 NK L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.79e-01 0.0847 0.078 0.73 NK L1
ENSG00000059758 CDK17 197626 sc-eQTL 3.45e-01 0.0374 0.0394 0.726 Other_T L1
ENSG00000074527 NTN4 806954 sc-eQTL 6.28e-01 -0.0354 0.073 0.726 Other_T L1
ENSG00000111144 LTA4H 554586 sc-eQTL 4.62e-01 0.0608 0.0825 0.726 Other_T L1
ENSG00000111145 ELK3 403731 sc-eQTL 1.04e-01 -0.105 0.0641 0.726 Other_T L1
ENSG00000139343 SNRPF 739178 sc-eQTL 5.76e-01 -0.0335 0.0599 0.726 Other_T L1
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.32e-01 -0.109 0.0909 0.726 Other_T L1
ENSG00000188596 CFAP54 108535 sc-eQTL 1.82e-01 -0.126 0.0941 0.726 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 197626 sc-eQTL 5.74e-01 0.0494 0.0877 0.717 B_Activated L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.40e-01 0.117 0.099 0.717 B_Activated L2
ENSG00000111145 ELK3 403731 sc-eQTL 1.84e-01 0.14 0.105 0.717 B_Activated L2
ENSG00000139343 SNRPF 739178 sc-eQTL 8.45e-01 -0.0195 0.0992 0.717 B_Activated L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 3.35e-01 -0.1 0.104 0.717 B_Activated L2
ENSG00000059758 CDK17 197626 sc-eQTL 1.69e-03 0.237 0.0745 0.725 B_Intermediate L2
ENSG00000111144 LTA4H 554586 sc-eQTL 1.65e-01 0.102 0.0735 0.725 B_Intermediate L2
ENSG00000111145 ELK3 403731 sc-eQTL 9.04e-01 0.0101 0.0833 0.725 B_Intermediate L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.05e-01 0.134 0.0825 0.725 B_Intermediate L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.56e-01 0.11 0.0969 0.725 B_Intermediate L2
ENSG00000059758 CDK17 197626 sc-eQTL 1.20e-01 0.114 0.0734 0.724 B_Memory L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.48e-02 0.19 0.0842 0.724 B_Memory L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.93e-02 0.142 0.0832 0.724 B_Memory L2
ENSG00000139343 SNRPF 739178 sc-eQTL 5.65e-01 -0.0512 0.0887 0.724 B_Memory L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 8.39e-01 -0.0199 0.0982 0.724 B_Memory L2
ENSG00000059758 CDK17 197626 sc-eQTL 6.66e-02 0.112 0.0605 0.726 B_Naive1 L2
ENSG00000111144 LTA4H 554586 sc-eQTL 8.68e-01 0.0106 0.0639 0.726 B_Naive1 L2
ENSG00000111145 ELK3 403731 sc-eQTL 5.91e-04 0.256 0.0734 0.726 B_Naive1 L2
ENSG00000139343 SNRPF 739178 sc-eQTL 3.38e-01 0.0704 0.0733 0.726 B_Naive1 L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.51e-01 0.0427 0.0942 0.726 B_Naive1 L2
ENSG00000059758 CDK17 197626 sc-eQTL 7.36e-01 0.0264 0.0783 0.725 B_Naive2 L2
ENSG00000111144 LTA4H 554586 sc-eQTL 3.37e-01 0.0712 0.0741 0.725 B_Naive2 L2
ENSG00000111145 ELK3 403731 sc-eQTL 4.17e-01 0.0711 0.0874 0.725 B_Naive2 L2
ENSG00000139343 SNRPF 739178 sc-eQTL 5.41e-01 0.0532 0.0868 0.725 B_Naive2 L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.86e-01 0.00184 0.103 0.725 B_Naive2 L2
ENSG00000059758 CDK17 197626 sc-eQTL 8.08e-02 0.126 0.0715 0.732 CD4_CTL L2
ENSG00000111144 LTA4H 554586 sc-eQTL 9.16e-02 -0.171 0.101 0.732 CD4_CTL L2
ENSG00000111145 ELK3 403731 sc-eQTL 4.90e-01 -0.0711 0.103 0.732 CD4_CTL L2
ENSG00000139343 SNRPF 739178 sc-eQTL 4.34e-01 0.07 0.0893 0.732 CD4_CTL L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 5.71e-01 0.0587 0.103 0.732 CD4_CTL L2
ENSG00000059758 CDK17 197626 sc-eQTL 4.71e-01 0.0322 0.0445 0.726 CD4_Naive L2
ENSG00000111144 LTA4H 554586 sc-eQTL 4.67e-01 0.0469 0.0644 0.726 CD4_Naive L2
ENSG00000111145 ELK3 403731 sc-eQTL 2.12e-01 -0.0805 0.0642 0.726 CD4_Naive L2
ENSG00000139343 SNRPF 739178 sc-eQTL 2.57e-01 0.0649 0.0571 0.726 CD4_Naive L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.81e-02 -0.154 0.0697 0.726 CD4_Naive L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.77e-01 0.047 0.0431 0.726 CD4_TCM L2
ENSG00000111144 LTA4H 554586 sc-eQTL 7.69e-01 -0.0215 0.0733 0.726 CD4_TCM L2
ENSG00000111145 ELK3 403731 sc-eQTL 1.07e-02 -0.183 0.071 0.726 CD4_TCM L2
ENSG00000139343 SNRPF 739178 sc-eQTL 2.96e-01 0.0618 0.059 0.726 CD4_TCM L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.10e-01 -0.00917 0.0809 0.726 CD4_TCM L2
ENSG00000059758 CDK17 197626 sc-eQTL 8.58e-02 0.0908 0.0526 0.726 CD4_TEM L2
ENSG00000111144 LTA4H 554586 sc-eQTL 8.36e-01 -0.0169 0.0818 0.726 CD4_TEM L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.28e-01 0.0166 0.076 0.726 CD4_TEM L2
ENSG00000139343 SNRPF 739178 sc-eQTL 3.13e-01 -0.0803 0.0794 0.726 CD4_TEM L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.47e-01 -0.109 0.0941 0.726 CD4_TEM L2
ENSG00000059758 CDK17 197626 sc-eQTL 4.11e-02 0.106 0.0515 0.726 CD8_CTL L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.57e-01 -0.107 0.0937 0.726 CD8_CTL L2
ENSG00000111145 ELK3 403731 sc-eQTL 3.60e-01 -0.0783 0.0854 0.726 CD8_CTL L2
ENSG00000139343 SNRPF 739178 sc-eQTL 5.86e-01 -0.0428 0.0786 0.726 CD8_CTL L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.81e-01 0.00216 0.0882 0.726 CD8_CTL L2
ENSG00000059758 CDK17 197626 sc-eQTL 1.92e-01 0.0807 0.0617 0.726 CD8_Naive L2
ENSG00000111144 LTA4H 554586 sc-eQTL 5.60e-01 -0.0433 0.0741 0.726 CD8_Naive L2
ENSG00000111145 ELK3 403731 sc-eQTL 6.10e-01 -0.04 0.0784 0.726 CD8_Naive L2
ENSG00000139343 SNRPF 739178 sc-eQTL 3.42e-01 0.067 0.0704 0.726 CD8_Naive L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.67e-01 -0.116 0.0836 0.726 CD8_Naive L2
ENSG00000059758 CDK17 197626 sc-eQTL 4.88e-02 0.134 0.0675 0.725 CD8_TCM L2
ENSG00000111144 LTA4H 554586 sc-eQTL 4.68e-01 0.0728 0.1 0.725 CD8_TCM L2
ENSG00000111145 ELK3 403731 sc-eQTL 2.85e-01 0.0907 0.0846 0.725 CD8_TCM L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.49e-01 0.141 0.0972 0.725 CD8_TCM L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.71e-02 -0.158 0.095 0.725 CD8_TCM L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.35e-02 0.186 0.0815 0.717 CD8_TEM L2
ENSG00000111144 LTA4H 554586 sc-eQTL 6.45e-01 0.0466 0.101 0.717 CD8_TEM L2
ENSG00000111145 ELK3 403731 sc-eQTL 7.99e-01 -0.0253 0.0994 0.717 CD8_TEM L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.71e-01 -0.126 0.0919 0.717 CD8_TEM L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.24e-01 -0.122 0.0999 0.717 CD8_TEM L2
ENSG00000059758 CDK17 197626 sc-eQTL 4.46e-01 0.0431 0.0564 0.727 MAIT L2
ENSG00000074527 NTN4 806954 sc-eQTL 8.04e-01 0.0189 0.0761 0.727 MAIT L2
ENSG00000111144 LTA4H 554586 sc-eQTL 6.28e-01 -0.0423 0.0871 0.727 MAIT L2
ENSG00000111145 ELK3 403731 sc-eQTL 5.42e-01 -0.0446 0.0731 0.727 MAIT L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.71e-01 -0.116 0.0844 0.727 MAIT L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 7.87e-02 -0.167 0.0945 0.727 MAIT L2
ENSG00000188596 CFAP54 108535 sc-eQTL 5.86e-01 -0.0515 0.0943 0.727 MAIT L2
ENSG00000059758 CDK17 197626 sc-eQTL 1.08e-02 0.147 0.0573 0.729 NK_CD56bright L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.79e-01 -0.0933 0.0859 0.729 NK_CD56bright L2
ENSG00000111145 ELK3 403731 sc-eQTL 7.30e-01 0.0316 0.0914 0.729 NK_CD56bright L2
ENSG00000139343 SNRPF 739178 sc-eQTL 4.29e-01 0.0756 0.0955 0.729 NK_CD56bright L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 8.30e-01 0.0208 0.0965 0.729 NK_CD56bright L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.47e-01 0.0578 0.0498 0.731 NK_CD56dim L2
ENSG00000111144 LTA4H 554586 sc-eQTL 5.43e-01 -0.0549 0.0901 0.731 NK_CD56dim L2
ENSG00000111145 ELK3 403731 sc-eQTL 7.14e-01 0.0293 0.0798 0.731 NK_CD56dim L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.78e-01 -0.102 0.0757 0.731 NK_CD56dim L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.80e-01 0.117 0.0872 0.731 NK_CD56dim L2
ENSG00000059758 CDK17 197626 sc-eQTL 3.16e-01 -0.0799 0.0796 0.735 NK_HLA L2
ENSG00000111144 LTA4H 554586 sc-eQTL 4.74e-01 -0.0748 0.104 0.735 NK_HLA L2
ENSG00000111145 ELK3 403731 sc-eQTL 5.99e-01 -0.0511 0.0969 0.735 NK_HLA L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.10e-01 0.161 0.1 0.735 NK_HLA L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.75e-01 0.13 0.0952 0.735 NK_HLA L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.94e-01 0.0574 0.0546 0.731 NK_cytokine L2
ENSG00000111144 LTA4H 554586 sc-eQTL 1.12e-01 -0.147 0.092 0.731 NK_cytokine L2
ENSG00000111145 ELK3 403731 sc-eQTL 9.26e-01 -0.00824 0.0886 0.731 NK_cytokine L2
ENSG00000139343 SNRPF 739178 sc-eQTL 7.08e-01 0.0281 0.075 0.731 NK_cytokine L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 3.38e-01 0.089 0.0926 0.731 NK_cytokine L2
ENSG00000059758 CDK17 197626 sc-eQTL 7.90e-01 0.0262 0.0983 0.715 PB L2
ENSG00000111144 LTA4H 554586 sc-eQTL 4.63e-01 -0.0636 0.0865 0.715 PB L2
ENSG00000111145 ELK3 403731 sc-eQTL 9.80e-02 0.183 0.11 0.715 PB L2
ENSG00000139343 SNRPF 739178 sc-eQTL 6.76e-01 0.0455 0.108 0.715 PB L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.67e-01 -0.143 0.128 0.715 PB L2
ENSG00000059758 CDK17 197626 sc-eQTL 9.41e-01 0.00458 0.0617 0.724 Pro_T L2
ENSG00000074527 NTN4 806954 sc-eQTL 8.16e-01 0.0162 0.0693 0.724 Pro_T L2
ENSG00000111144 LTA4H 554586 sc-eQTL 9.00e-01 0.0102 0.0814 0.724 Pro_T L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.49e-02 -0.169 0.0978 0.724 Pro_T L2
ENSG00000139343 SNRPF 739178 sc-eQTL 6.22e-01 -0.0307 0.0621 0.724 Pro_T L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.98e-01 -0.0351 0.0902 0.724 Pro_T L2
ENSG00000188596 CFAP54 108535 sc-eQTL 5.83e-01 0.0401 0.0729 0.724 Pro_T L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.40e-01 -0.0786 0.0666 0.726 Treg L2
ENSG00000111144 LTA4H 554586 sc-eQTL 6.46e-01 0.0389 0.0846 0.726 Treg L2
ENSG00000111145 ELK3 403731 sc-eQTL 9.57e-01 -0.00412 0.0767 0.726 Treg L2
ENSG00000139343 SNRPF 739178 sc-eQTL 9.60e-01 0.00447 0.0888 0.726 Treg L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.82e-02 -0.164 0.0985 0.726 Treg L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.58e-01 0.0942 0.083 0.722 cDC L2
ENSG00000084110 HAL 601741 sc-eQTL 6.69e-01 -0.0371 0.0865 0.722 cDC L2
ENSG00000111144 LTA4H 554586 sc-eQTL 5.47e-02 0.142 0.0734 0.722 cDC L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.45e-01 -0.0192 0.0979 0.722 cDC L2
ENSG00000139343 SNRPF 739178 sc-eQTL 8.32e-01 0.0174 0.0819 0.722 cDC L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.15e-01 -0.0503 0.0998 0.722 cDC L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 5.50e-01 0.0504 0.0841 0.722 cDC L2
ENSG00000059758 CDK17 197626 sc-eQTL 6.60e-01 -0.0317 0.0718 0.726 cMono_IL1B L2
ENSG00000084110 HAL 601741 sc-eQTL 7.06e-01 0.0296 0.0784 0.726 cMono_IL1B L2
ENSG00000111144 LTA4H 554586 sc-eQTL 3.11e-01 0.0858 0.0845 0.726 cMono_IL1B L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.93e-01 0.00882 0.0652 0.726 cMono_IL1B L2
ENSG00000139343 SNRPF 739178 sc-eQTL 2.44e-01 -0.0783 0.0671 0.726 cMono_IL1B L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.92e-01 0.0976 0.0924 0.726 cMono_IL1B L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 5.62e-01 0.0502 0.0864 0.726 cMono_IL1B L2
ENSG00000059758 CDK17 197626 sc-eQTL 8.60e-01 -0.0145 0.0819 0.726 cMono_S100A L2
ENSG00000084110 HAL 601741 sc-eQTL 6.59e-02 0.169 0.0912 0.726 cMono_S100A L2
ENSG00000111144 LTA4H 554586 sc-eQTL 6.25e-01 0.0449 0.0918 0.726 cMono_S100A L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.67e-01 0.0126 0.0748 0.726 cMono_S100A L2
ENSG00000139343 SNRPF 739178 sc-eQTL 9.85e-01 -0.00137 0.0739 0.726 cMono_S100A L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.76e-01 0.0418 0.0997 0.726 cMono_S100A L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 4.42e-01 -0.0722 0.0938 0.726 cMono_S100A L2
ENSG00000059758 CDK17 197626 sc-eQTL 7.21e-01 0.0285 0.0795 0.733 gdT L2
ENSG00000074527 NTN4 806954 sc-eQTL 6.38e-01 0.043 0.0912 0.733 gdT L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.23e-01 -0.145 0.118 0.733 gdT L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.47e-01 -0.0213 0.11 0.733 gdT L2
ENSG00000139343 SNRPF 739178 sc-eQTL 4.89e-02 0.208 0.105 0.733 gdT L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 4.31e-01 -0.0925 0.117 0.733 gdT L2
ENSG00000188596 CFAP54 108535 sc-eQTL 8.45e-01 0.0201 0.103 0.733 gdT L2
ENSG00000059758 CDK17 197626 sc-eQTL 5.70e-01 -0.0529 0.0929 0.72 intMono L2
ENSG00000084110 HAL 601741 sc-eQTL 5.74e-01 -0.0529 0.0939 0.72 intMono L2
ENSG00000111144 LTA4H 554586 sc-eQTL 9.58e-01 -0.00504 0.0964 0.72 intMono L2
ENSG00000111145 ELK3 403731 sc-eQTL 9.89e-01 -0.00117 0.0859 0.72 intMono L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.89e-01 0.121 0.0914 0.72 intMono L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 3.51e-01 0.089 0.0952 0.72 intMono L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 2.90e-01 0.102 0.0957 0.72 intMono L2
ENSG00000059758 CDK17 197626 sc-eQTL 2.51e-01 -0.0862 0.0748 0.719 ncMono L2
ENSG00000084110 HAL 601741 sc-eQTL 4.31e-01 0.0661 0.0837 0.719 ncMono L2
ENSG00000111144 LTA4H 554586 sc-eQTL 7.10e-01 -0.0348 0.0934 0.719 ncMono L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.17e-01 0.0186 0.0802 0.719 ncMono L2
ENSG00000139343 SNRPF 739178 sc-eQTL 3.32e-04 -0.29 0.0793 0.719 ncMono L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 1.09e-01 0.139 0.0865 0.719 ncMono L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 5.14e-01 -0.0649 0.0992 0.719 ncMono L2
ENSG00000059758 CDK17 197626 sc-eQTL 6.92e-01 0.0395 0.0993 0.732 pDC L2
ENSG00000084110 HAL 601741 sc-eQTL 6.28e-01 -0.0407 0.0838 0.732 pDC L2
ENSG00000111144 LTA4H 554586 sc-eQTL 2.34e-02 0.212 0.0924 0.732 pDC L2
ENSG00000111145 ELK3 403731 sc-eQTL 8.49e-03 0.299 0.112 0.732 pDC L2
ENSG00000139343 SNRPF 739178 sc-eQTL 1.75e-01 0.136 0.0996 0.732 pDC L2
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.09e-01 -0.0566 0.111 0.732 pDC L2
ENSG00000257715 AC007298.1 572783 sc-eQTL 6.09e-01 -0.0486 0.0948 0.732 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 197626 sc-eQTL 3.39e-04 0.226 0.0619 0.726 B_Memory LOneK1K
ENSG00000111144 LTA4H 554586 sc-eQTL 7.63e-02 0.117 0.0658 0.726 B_Memory LOneK1K
ENSG00000111145 ELK3 403731 sc-eQTL 3.94e-01 0.0646 0.0756 0.726 B_Memory LOneK1K
ENSG00000139343 SNRPF 739178 sc-eQTL 1.26e-01 0.112 0.073 0.726 B_Memory LOneK1K
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.12e-01 -0.0106 0.0963 0.726 B_Memory LOneK1K
ENSG00000059758 CDK17 197626 sc-eQTL 4.51e-02 0.109 0.0541 0.726 B_Naive LOneK1K
ENSG00000111144 LTA4H 554586 sc-eQTL 7.21e-01 0.0219 0.0613 0.726 B_Naive LOneK1K
ENSG00000111145 ELK3 403731 sc-eQTL 4.87e-03 0.195 0.0685 0.726 B_Naive LOneK1K
ENSG00000139343 SNRPF 739178 sc-eQTL 5.29e-01 0.0443 0.0703 0.726 B_Naive LOneK1K
ENSG00000139350 NEDD1 -309117 sc-eQTL 6.52e-01 0.042 0.093 0.726 B_Naive LOneK1K
ENSG00000059758 CDK17 197626 sc-eQTL 8.11e-01 -0.0156 0.0649 0.726 CD14_Mono LOneK1K
ENSG00000084110 HAL 601741 sc-eQTL 1.64e-01 0.109 0.0782 0.726 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 554586 sc-eQTL 4.71e-01 0.0622 0.0862 0.726 CD14_Mono LOneK1K
ENSG00000111145 ELK3 403731 sc-eQTL 8.04e-01 0.0155 0.0623 0.726 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 739178 sc-eQTL 2.61e-01 -0.0676 0.06 0.726 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -309117 sc-eQTL 4.03e-01 0.0789 0.0942 0.726 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 572783 sc-eQTL 7.60e-01 -0.0267 0.0873 0.726 CD14_Mono LOneK1K
ENSG00000059758 CDK17 197626 sc-eQTL 2.20e-01 -0.0837 0.0681 0.728 CD16_Mono LOneK1K
ENSG00000084110 HAL 601741 sc-eQTL 6.32e-01 0.0387 0.0807 0.728 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 554586 sc-eQTL 9.23e-01 0.00863 0.0895 0.728 CD16_Mono LOneK1K
ENSG00000111145 ELK3 403731 sc-eQTL 6.68e-01 0.0285 0.0662 0.728 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 739178 sc-eQTL 1.69e-01 -0.0938 0.068 0.728 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -309117 sc-eQTL 9.26e-02 0.147 0.087 0.728 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 572783 sc-eQTL 8.08e-01 -0.0225 0.0927 0.728 CD16_Mono LOneK1K
ENSG00000059758 CDK17 197626 sc-eQTL 3.84e-01 0.0408 0.0468 0.731 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 554586 sc-eQTL 1.86e-01 -0.108 0.0811 0.731 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 403731 sc-eQTL 6.67e-01 0.0321 0.0745 0.731 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 739178 sc-eQTL 9.44e-01 0.00452 0.0638 0.731 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -309117 sc-eQTL 2.13e-01 0.099 0.0792 0.731 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -309117 eQTL 3.8e-11 0.167 0.025 0.0 0.0 0.274

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -309117 4.29e-06 4.99e-06 1.31e-06 3.1e-06 1.73e-06 1.19e-06 6.54e-06 6.85e-07 3.03e-06 2.08e-06 3.71e-06 2.45e-06 8.92e-06 1.45e-06 1.62e-06 2.68e-06 1.79e-06 2.79e-06 2.26e-06 9.64e-07 2.91e-06 4.49e-06 4.04e-06 1.49e-06 5.12e-06 1.34e-06 1.61e-06 1.67e-06 4.36e-06 6.32e-06 2.72e-06 2.53e-07 7.09e-07 1.71e-06 2.22e-06 9.08e-07 9.7e-07 4.37e-07 1.23e-06 6.1e-07 3.75e-07 5.69e-06 8.59e-07 4.37e-07 6.97e-07 1.8e-06 1.12e-06 6.4e-07 4.34e-07