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Genes within 1Mb (chr12:96593592:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 193112 sc-eQTL 9.84e-02 -0.076 0.0458 0.459 B L1
ENSG00000111144 LTA4H 550072 sc-eQTL 1.60e-01 -0.0803 0.057 0.459 B L1
ENSG00000111145 ELK3 399217 sc-eQTL 1.41e-01 -0.0896 0.0607 0.459 B L1
ENSG00000139343 SNRPF 734664 sc-eQTL 3.74e-01 -0.0493 0.0553 0.459 B L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 4.98e-01 0.0548 0.0808 0.459 B L1
ENSG00000059758 CDK17 193112 sc-eQTL 7.29e-01 0.0129 0.0372 0.459 CD4T L1
ENSG00000111144 LTA4H 550072 sc-eQTL 8.44e-01 -0.0101 0.0511 0.459 CD4T L1
ENSG00000111145 ELK3 399217 sc-eQTL 2.41e-01 0.0648 0.0552 0.459 CD4T L1
ENSG00000139343 SNRPF 734664 sc-eQTL 8.27e-01 0.0106 0.0484 0.459 CD4T L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.21e-01 0.0213 0.0596 0.459 CD4T L1
ENSG00000059758 CDK17 193112 sc-eQTL 9.07e-01 -0.00448 0.0384 0.459 CD8T L1
ENSG00000111144 LTA4H 550072 sc-eQTL 5.18e-01 0.0267 0.0412 0.459 CD8T L1
ENSG00000111145 ELK3 399217 sc-eQTL 3.19e-01 0.0618 0.0619 0.459 CD8T L1
ENSG00000139343 SNRPF 734664 sc-eQTL 7.00e-01 -0.0196 0.0508 0.459 CD8T L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.33e-01 0.0806 0.0673 0.459 CD8T L1
ENSG00000059758 CDK17 193112 sc-eQTL 8.03e-01 0.0184 0.0736 0.459 DC L1
ENSG00000084110 HAL 597227 sc-eQTL 6.38e-01 0.0395 0.0838 0.459 DC L1
ENSG00000111144 LTA4H 550072 sc-eQTL 2.43e-02 -0.154 0.0677 0.459 DC L1
ENSG00000111145 ELK3 399217 sc-eQTL 4.49e-01 0.0636 0.0839 0.459 DC L1
ENSG00000139343 SNRPF 734664 sc-eQTL 4.30e-01 -0.0552 0.0697 0.459 DC L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 6.23e-02 0.167 0.0889 0.459 DC L1
ENSG00000257715 AC007298.1 568269 sc-eQTL 6.83e-01 0.0331 0.0809 0.459 DC L1
ENSG00000059758 CDK17 193112 sc-eQTL 5.47e-01 0.0349 0.058 0.459 Mono L1
ENSG00000084110 HAL 597227 sc-eQTL 5.82e-01 -0.0403 0.0731 0.459 Mono L1
ENSG00000111144 LTA4H 550072 sc-eQTL 1.41e-01 -0.121 0.0821 0.459 Mono L1
ENSG00000111145 ELK3 399217 sc-eQTL 8.36e-01 -0.0115 0.0554 0.459 Mono L1
ENSG00000139343 SNRPF 734664 sc-eQTL 1.32e-01 0.0786 0.052 0.459 Mono L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.49e-01 0.0925 0.08 0.459 Mono L1
ENSG00000257715 AC007298.1 568269 sc-eQTL 2.52e-01 -0.089 0.0776 0.459 Mono L1
ENSG00000059758 CDK17 193112 sc-eQTL 1.63e-01 -0.0602 0.043 0.457 NK L1
ENSG00000111144 LTA4H 550072 sc-eQTL 2.48e-01 0.0848 0.0731 0.457 NK L1
ENSG00000111145 ELK3 399217 sc-eQTL 6.81e-01 -0.0287 0.0696 0.457 NK L1
ENSG00000139343 SNRPF 734664 sc-eQTL 5.79e-01 0.032 0.0577 0.457 NK L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.13e-01 0.0173 0.073 0.457 NK L1
ENSG00000059758 CDK17 193112 sc-eQTL 3.70e-01 -0.0324 0.0361 0.459 Other_T L1
ENSG00000074527 NTN4 802440 sc-eQTL 2.54e-01 0.0763 0.0666 0.459 Other_T L1
ENSG00000111144 LTA4H 550072 sc-eQTL 7.03e-01 -0.0289 0.0755 0.459 Other_T L1
ENSG00000111145 ELK3 399217 sc-eQTL 1.72e-01 0.0805 0.0587 0.459 Other_T L1
ENSG00000139343 SNRPF 734664 sc-eQTL 3.85e-01 0.0476 0.0547 0.459 Other_T L1
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.32e-01 0.0996 0.0831 0.459 Other_T L1
ENSG00000188596 CFAP54 104021 sc-eQTL 8.25e-01 -0.0192 0.0864 0.459 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 193112 sc-eQTL 7.90e-01 -0.0223 0.084 0.469 B_Activated L2
ENSG00000111144 LTA4H 550072 sc-eQTL 2.13e-01 -0.118 0.0947 0.469 B_Activated L2
ENSG00000111145 ELK3 399217 sc-eQTL 1.61e-01 -0.141 0.1 0.469 B_Activated L2
ENSG00000139343 SNRPF 734664 sc-eQTL 9.27e-01 -0.00868 0.0949 0.469 B_Activated L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.75e-02 0.175 0.0984 0.469 B_Activated L2
ENSG00000059758 CDK17 193112 sc-eQTL 6.51e-02 -0.131 0.0709 0.461 B_Intermediate L2
ENSG00000111144 LTA4H 550072 sc-eQTL 1.10e-01 -0.11 0.0688 0.461 B_Intermediate L2
ENSG00000111145 ELK3 399217 sc-eQTL 5.01e-01 0.0526 0.078 0.461 B_Intermediate L2
ENSG00000139343 SNRPF 734664 sc-eQTL 5.01e-01 -0.0524 0.0776 0.461 B_Intermediate L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 6.52e-01 -0.0412 0.091 0.461 B_Intermediate L2
ENSG00000059758 CDK17 193112 sc-eQTL 9.44e-01 -0.00488 0.0694 0.457 B_Memory L2
ENSG00000111144 LTA4H 550072 sc-eQTL 8.22e-01 0.018 0.0801 0.457 B_Memory L2
ENSG00000111145 ELK3 399217 sc-eQTL 5.68e-02 -0.15 0.0781 0.457 B_Memory L2
ENSG00000139343 SNRPF 734664 sc-eQTL 3.06e-01 0.0855 0.0833 0.457 B_Memory L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 4.56e-01 -0.0689 0.0922 0.457 B_Memory L2
ENSG00000059758 CDK17 193112 sc-eQTL 4.29e-01 -0.0451 0.0569 0.459 B_Naive1 L2
ENSG00000111144 LTA4H 550072 sc-eQTL 6.44e-01 -0.0276 0.0596 0.459 B_Naive1 L2
ENSG00000111145 ELK3 399217 sc-eQTL 3.92e-02 -0.145 0.0698 0.459 B_Naive1 L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.40e-01 -0.101 0.0682 0.459 B_Naive1 L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 5.21e-01 -0.0565 0.0879 0.459 B_Naive1 L2
ENSG00000059758 CDK17 193112 sc-eQTL 5.58e-01 -0.0432 0.0735 0.459 B_Naive2 L2
ENSG00000111144 LTA4H 550072 sc-eQTL 3.12e-01 -0.0705 0.0695 0.459 B_Naive2 L2
ENSG00000111145 ELK3 399217 sc-eQTL 7.76e-01 -0.0235 0.0822 0.459 B_Naive2 L2
ENSG00000139343 SNRPF 734664 sc-eQTL 5.44e-01 -0.0495 0.0815 0.459 B_Naive2 L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.38e-01 0.114 0.0967 0.459 B_Naive2 L2
ENSG00000059758 CDK17 193112 sc-eQTL 6.29e-01 -0.0324 0.0671 0.455 CD4_CTL L2
ENSG00000111144 LTA4H 550072 sc-eQTL 1.18e-01 0.148 0.0941 0.455 CD4_CTL L2
ENSG00000111145 ELK3 399217 sc-eQTL 4.94e-01 0.0657 0.0958 0.455 CD4_CTL L2
ENSG00000139343 SNRPF 734664 sc-eQTL 4.76e-01 -0.0594 0.0833 0.455 CD4_CTL L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.07e-01 0.0984 0.0961 0.455 CD4_CTL L2
ENSG00000059758 CDK17 193112 sc-eQTL 7.22e-01 0.0145 0.0408 0.459 CD4_Naive L2
ENSG00000111144 LTA4H 550072 sc-eQTL 7.84e-01 -0.0162 0.059 0.459 CD4_Naive L2
ENSG00000111145 ELK3 399217 sc-eQTL 3.46e-01 0.0556 0.0589 0.459 CD4_Naive L2
ENSG00000139343 SNRPF 734664 sc-eQTL 8.68e-01 0.00871 0.0524 0.459 CD4_Naive L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.77e-01 0.057 0.0644 0.459 CD4_Naive L2
ENSG00000059758 CDK17 193112 sc-eQTL 9.32e-01 0.0034 0.0399 0.459 CD4_TCM L2
ENSG00000111144 LTA4H 550072 sc-eQTL 9.92e-01 -0.000643 0.0677 0.459 CD4_TCM L2
ENSG00000111145 ELK3 399217 sc-eQTL 2.49e-01 0.0768 0.0664 0.459 CD4_TCM L2
ENSG00000139343 SNRPF 734664 sc-eQTL 6.44e-01 0.0253 0.0546 0.459 CD4_TCM L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.51e-01 -0.0856 0.0744 0.459 CD4_TCM L2
ENSG00000059758 CDK17 193112 sc-eQTL 1.35e-01 -0.0735 0.049 0.459 CD4_TEM L2
ENSG00000111144 LTA4H 550072 sc-eQTL 6.88e-01 -0.0306 0.0761 0.459 CD4_TEM L2
ENSG00000111145 ELK3 399217 sc-eQTL 7.51e-01 -0.0225 0.0707 0.459 CD4_TEM L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.12e-01 0.117 0.0736 0.459 CD4_TEM L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.44e-01 0.0173 0.0878 0.459 CD4_TEM L2
ENSG00000059758 CDK17 193112 sc-eQTL 1.00e-01 -0.0788 0.0478 0.459 CD8_CTL L2
ENSG00000111144 LTA4H 550072 sc-eQTL 8.43e-01 0.0172 0.0868 0.459 CD8_CTL L2
ENSG00000111145 ELK3 399217 sc-eQTL 4.39e-01 -0.0612 0.0789 0.459 CD8_CTL L2
ENSG00000139343 SNRPF 734664 sc-eQTL 4.63e-01 0.0534 0.0726 0.459 CD8_CTL L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 5.19e-01 0.0526 0.0814 0.459 CD8_CTL L2
ENSG00000059758 CDK17 193112 sc-eQTL 7.53e-01 0.018 0.057 0.459 CD8_Naive L2
ENSG00000111144 LTA4H 550072 sc-eQTL 8.02e-01 0.0171 0.0684 0.459 CD8_Naive L2
ENSG00000111145 ELK3 399217 sc-eQTL 1.57e-01 0.102 0.072 0.459 CD8_Naive L2
ENSG00000139343 SNRPF 734664 sc-eQTL 2.94e-01 -0.0682 0.0649 0.459 CD8_Naive L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.24e-01 0.0274 0.0774 0.459 CD8_Naive L2
ENSG00000059758 CDK17 193112 sc-eQTL 1.24e-01 -0.0964 0.0624 0.465 CD8_TCM L2
ENSG00000111144 LTA4H 550072 sc-eQTL 7.42e-01 -0.0305 0.0922 0.465 CD8_TCM L2
ENSG00000111145 ELK3 399217 sc-eQTL 7.41e-01 0.0259 0.0781 0.465 CD8_TCM L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.53e-01 -0.129 0.0895 0.465 CD8_TCM L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.70e-02 0.194 0.087 0.465 CD8_TCM L2
ENSG00000059758 CDK17 193112 sc-eQTL 6.49e-01 -0.0365 0.0801 0.466 CD8_TEM L2
ENSG00000111144 LTA4H 550072 sc-eQTL 8.01e-01 -0.0247 0.0982 0.466 CD8_TEM L2
ENSG00000111145 ELK3 399217 sc-eQTL 7.25e-01 -0.0339 0.0965 0.466 CD8_TEM L2
ENSG00000139343 SNRPF 734664 sc-eQTL 2.01e-01 0.115 0.0893 0.466 CD8_TEM L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.71e-01 0.0872 0.0972 0.466 CD8_TEM L2
ENSG00000059758 CDK17 193112 sc-eQTL 8.03e-01 -0.013 0.0522 0.459 MAIT L2
ENSG00000074527 NTN4 802440 sc-eQTL 3.99e-01 0.0594 0.0702 0.459 MAIT L2
ENSG00000111144 LTA4H 550072 sc-eQTL 6.03e-01 0.042 0.0805 0.459 MAIT L2
ENSG00000111145 ELK3 399217 sc-eQTL 1.78e-01 0.0911 0.0673 0.459 MAIT L2
ENSG00000139343 SNRPF 734664 sc-eQTL 2.97e-02 0.17 0.0775 0.459 MAIT L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.57e-01 0.0811 0.0878 0.459 MAIT L2
ENSG00000188596 CFAP54 104021 sc-eQTL 5.52e-01 0.0519 0.0872 0.459 MAIT L2
ENSG00000059758 CDK17 193112 sc-eQTL 7.76e-04 -0.183 0.0535 0.453 NK_CD56bright L2
ENSG00000111144 LTA4H 550072 sc-eQTL 9.96e-01 -0.000402 0.0814 0.453 NK_CD56bright L2
ENSG00000111145 ELK3 399217 sc-eQTL 6.44e-01 -0.0399 0.0863 0.453 NK_CD56bright L2
ENSG00000139343 SNRPF 734664 sc-eQTL 3.04e-01 -0.0929 0.0901 0.453 NK_CD56bright L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 9.38e-01 -0.00705 0.0912 0.453 NK_CD56bright L2
ENSG00000059758 CDK17 193112 sc-eQTL 1.07e-01 -0.0746 0.0461 0.455 NK_CD56dim L2
ENSG00000111144 LTA4H 550072 sc-eQTL 3.26e-01 0.0823 0.0836 0.455 NK_CD56dim L2
ENSG00000111145 ELK3 399217 sc-eQTL 8.25e-01 -0.0165 0.0742 0.455 NK_CD56dim L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.17e-02 0.177 0.0695 0.455 NK_CD56dim L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 6.18e-01 0.0406 0.0813 0.455 NK_CD56dim L2
ENSG00000059758 CDK17 193112 sc-eQTL 9.88e-01 0.00109 0.0736 0.45 NK_HLA L2
ENSG00000111144 LTA4H 550072 sc-eQTL 4.05e-01 0.0804 0.0963 0.45 NK_HLA L2
ENSG00000111145 ELK3 399217 sc-eQTL 7.38e-01 -0.03 0.0895 0.45 NK_HLA L2
ENSG00000139343 SNRPF 734664 sc-eQTL 3.00e-01 -0.0967 0.093 0.45 NK_HLA L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 6.71e-01 0.0375 0.0882 0.45 NK_HLA L2
ENSG00000059758 CDK17 193112 sc-eQTL 4.13e-01 -0.0415 0.0506 0.455 NK_cytokine L2
ENSG00000111144 LTA4H 550072 sc-eQTL 6.30e-01 0.0413 0.0857 0.455 NK_cytokine L2
ENSG00000111145 ELK3 399217 sc-eQTL 6.64e-01 0.0357 0.0821 0.455 NK_cytokine L2
ENSG00000139343 SNRPF 734664 sc-eQTL 6.81e-01 -0.0286 0.0695 0.455 NK_cytokine L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 2.41e-01 -0.101 0.0857 0.455 NK_cytokine L2
ENSG00000059758 CDK17 193112 sc-eQTL 5.38e-01 0.0632 0.102 0.456 PB L2
ENSG00000111144 LTA4H 550072 sc-eQTL 5.54e-01 0.0535 0.0901 0.456 PB L2
ENSG00000111145 ELK3 399217 sc-eQTL 2.63e-02 -0.255 0.113 0.456 PB L2
ENSG00000139343 SNRPF 734664 sc-eQTL 7.19e-01 0.0407 0.113 0.456 PB L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.39e-01 0.128 0.134 0.456 PB L2
ENSG00000059758 CDK17 193112 sc-eQTL 8.44e-01 0.0112 0.0569 0.463 Pro_T L2
ENSG00000074527 NTN4 802440 sc-eQTL 4.37e-01 0.0497 0.0638 0.463 Pro_T L2
ENSG00000111144 LTA4H 550072 sc-eQTL 7.02e-01 -0.0288 0.0751 0.463 Pro_T L2
ENSG00000111145 ELK3 399217 sc-eQTL 1.98e-01 0.117 0.0906 0.463 Pro_T L2
ENSG00000139343 SNRPF 734664 sc-eQTL 4.56e-01 0.0428 0.0572 0.463 Pro_T L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.68e-01 -0.0246 0.0833 0.463 Pro_T L2
ENSG00000188596 CFAP54 104021 sc-eQTL 4.15e-01 -0.0549 0.0672 0.463 Pro_T L2
ENSG00000059758 CDK17 193112 sc-eQTL 4.81e-01 0.0441 0.0624 0.459 Treg L2
ENSG00000111144 LTA4H 550072 sc-eQTL 9.44e-01 0.00557 0.0792 0.459 Treg L2
ENSG00000111145 ELK3 399217 sc-eQTL 4.33e-01 0.0563 0.0716 0.459 Treg L2
ENSG00000139343 SNRPF 734664 sc-eQTL 2.99e-01 -0.0863 0.0829 0.459 Treg L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.52e-01 -0.0173 0.0927 0.459 Treg L2
ENSG00000059758 CDK17 193112 sc-eQTL 6.45e-01 -0.0363 0.0786 0.459 cDC L2
ENSG00000084110 HAL 597227 sc-eQTL 3.61e-01 0.0748 0.0816 0.459 cDC L2
ENSG00000111144 LTA4H 550072 sc-eQTL 1.04e-02 -0.178 0.0688 0.459 cDC L2
ENSG00000111145 ELK3 399217 sc-eQTL 4.43e-01 0.0711 0.0924 0.459 cDC L2
ENSG00000139343 SNRPF 734664 sc-eQTL 6.26e-01 -0.0378 0.0774 0.459 cDC L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 5.82e-01 0.052 0.0943 0.459 cDC L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 9.18e-01 -0.00821 0.0796 0.459 cDC L2
ENSG00000059758 CDK17 193112 sc-eQTL 1.17e-01 0.105 0.0669 0.459 cMono_IL1B L2
ENSG00000084110 HAL 597227 sc-eQTL 7.26e-01 0.0257 0.0733 0.459 cMono_IL1B L2
ENSG00000111144 LTA4H 550072 sc-eQTL 5.13e-02 -0.154 0.0785 0.459 cMono_IL1B L2
ENSG00000111145 ELK3 399217 sc-eQTL 3.43e-01 0.0579 0.0609 0.459 cMono_IL1B L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.27e-01 0.096 0.0626 0.459 cMono_IL1B L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 4.33e-02 0.175 0.0859 0.459 cMono_IL1B L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 8.68e-02 -0.138 0.0804 0.459 cMono_IL1B L2
ENSG00000059758 CDK17 193112 sc-eQTL 6.04e-01 0.0395 0.0761 0.459 cMono_S100A L2
ENSG00000084110 HAL 597227 sc-eQTL 1.04e-01 -0.138 0.0849 0.459 cMono_S100A L2
ENSG00000111144 LTA4H 550072 sc-eQTL 2.72e-01 -0.0938 0.0851 0.459 cMono_S100A L2
ENSG00000111145 ELK3 399217 sc-eQTL 2.70e-01 -0.0767 0.0693 0.459 cMono_S100A L2
ENSG00000139343 SNRPF 734664 sc-eQTL 9.88e-01 0.000993 0.0687 0.459 cMono_S100A L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 5.42e-01 0.0566 0.0927 0.459 cMono_S100A L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 8.96e-01 -0.0114 0.0873 0.459 cMono_S100A L2
ENSG00000059758 CDK17 193112 sc-eQTL 4.34e-01 -0.0588 0.0749 0.455 gdT L2
ENSG00000074527 NTN4 802440 sc-eQTL 8.99e-01 0.0109 0.0862 0.455 gdT L2
ENSG00000111144 LTA4H 550072 sc-eQTL 4.07e-01 0.0932 0.112 0.455 gdT L2
ENSG00000111145 ELK3 399217 sc-eQTL 8.16e-01 -0.0242 0.104 0.455 gdT L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.01e-01 -0.164 0.0994 0.455 gdT L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.14e-01 0.0406 0.111 0.455 gdT L2
ENSG00000188596 CFAP54 104021 sc-eQTL 5.47e-01 -0.0585 0.097 0.455 gdT L2
ENSG00000059758 CDK17 193112 sc-eQTL 4.68e-01 0.0626 0.0861 0.467 intMono L2
ENSG00000084110 HAL 597227 sc-eQTL 5.14e-01 -0.0569 0.0871 0.467 intMono L2
ENSG00000111144 LTA4H 550072 sc-eQTL 2.95e-01 -0.0937 0.0892 0.467 intMono L2
ENSG00000111145 ELK3 399217 sc-eQTL 5.69e-01 -0.0454 0.0796 0.467 intMono L2
ENSG00000139343 SNRPF 734664 sc-eQTL 3.29e-01 0.0832 0.0849 0.467 intMono L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.09e-01 0.0331 0.0885 0.467 intMono L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 8.98e-02 -0.151 0.0884 0.467 intMono L2
ENSG00000059758 CDK17 193112 sc-eQTL 9.09e-01 0.00796 0.0693 0.468 ncMono L2
ENSG00000084110 HAL 597227 sc-eQTL 8.84e-01 0.0113 0.0774 0.468 ncMono L2
ENSG00000111144 LTA4H 550072 sc-eQTL 9.80e-01 -0.0022 0.0863 0.468 ncMono L2
ENSG00000111145 ELK3 399217 sc-eQTL 6.68e-01 -0.0318 0.0741 0.468 ncMono L2
ENSG00000139343 SNRPF 734664 sc-eQTL 1.09e-02 0.191 0.0745 0.468 ncMono L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 3.94e-01 -0.0685 0.0802 0.468 ncMono L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 5.21e-01 0.0589 0.0916 0.468 ncMono L2
ENSG00000059758 CDK17 193112 sc-eQTL 2.40e-01 0.107 0.0911 0.446 pDC L2
ENSG00000084110 HAL 597227 sc-eQTL 7.64e-01 -0.0233 0.0772 0.446 pDC L2
ENSG00000111144 LTA4H 550072 sc-eQTL 5.25e-03 -0.239 0.0843 0.446 pDC L2
ENSG00000111145 ELK3 399217 sc-eQTL 5.47e-01 -0.0638 0.106 0.446 pDC L2
ENSG00000139343 SNRPF 734664 sc-eQTL 2.56e-01 -0.105 0.0919 0.446 pDC L2
ENSG00000139350 NEDD1 -313631 sc-eQTL 1.59e-01 0.143 0.101 0.446 pDC L2
ENSG00000257715 AC007298.1 568269 sc-eQTL 9.74e-01 0.00282 0.0873 0.446 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 193112 sc-eQTL 1.12e-01 -0.095 0.0595 0.459 B_Memory LOneK1K
ENSG00000111144 LTA4H 550072 sc-eQTL 2.20e-01 -0.0761 0.0619 0.459 B_Memory LOneK1K
ENSG00000111145 ELK3 399217 sc-eQTL 4.52e-01 -0.0534 0.0709 0.459 B_Memory LOneK1K
ENSG00000139343 SNRPF 734664 sc-eQTL 9.04e-01 -0.00835 0.0688 0.459 B_Memory LOneK1K
ENSG00000139350 NEDD1 -313631 sc-eQTL 7.38e-01 -0.0302 0.0903 0.459 B_Memory LOneK1K
ENSG00000059758 CDK17 193112 sc-eQTL 2.38e-01 -0.0606 0.0512 0.459 B_Naive LOneK1K
ENSG00000111144 LTA4H 550072 sc-eQTL 2.50e-01 -0.0663 0.0575 0.459 B_Naive LOneK1K
ENSG00000111145 ELK3 399217 sc-eQTL 2.60e-01 -0.0739 0.0654 0.459 B_Naive LOneK1K
ENSG00000139343 SNRPF 734664 sc-eQTL 4.33e-01 -0.0518 0.066 0.459 B_Naive LOneK1K
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.46e-01 0.017 0.0874 0.459 B_Naive LOneK1K
ENSG00000059758 CDK17 193112 sc-eQTL 1.73e-01 0.0824 0.0602 0.459 CD14_Mono LOneK1K
ENSG00000084110 HAL 597227 sc-eQTL 7.00e-01 -0.0283 0.0732 0.459 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 550072 sc-eQTL 9.19e-02 -0.135 0.0799 0.459 CD14_Mono LOneK1K
ENSG00000111145 ELK3 399217 sc-eQTL 7.61e-01 -0.0177 0.0581 0.459 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 734664 sc-eQTL 2.63e-01 0.0627 0.0559 0.459 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -313631 sc-eQTL 1.07e-01 0.141 0.0874 0.459 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 568269 sc-eQTL 2.60e-01 -0.0916 0.0812 0.459 CD14_Mono LOneK1K
ENSG00000059758 CDK17 193112 sc-eQTL 5.62e-01 0.0364 0.0627 0.457 CD16_Mono LOneK1K
ENSG00000084110 HAL 597227 sc-eQTL 9.24e-01 -0.0071 0.0742 0.457 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 550072 sc-eQTL 5.50e-01 -0.0492 0.0822 0.457 CD16_Mono LOneK1K
ENSG00000111145 ELK3 399217 sc-eQTL 7.94e-01 -0.0159 0.0608 0.457 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 734664 sc-eQTL 2.74e-02 0.138 0.062 0.457 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.80e-01 -0.0122 0.0805 0.457 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 568269 sc-eQTL 9.49e-01 0.0055 0.0852 0.457 CD16_Mono LOneK1K
ENSG00000059758 CDK17 193112 sc-eQTL 3.56e-01 -0.0403 0.0436 0.455 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 550072 sc-eQTL 1.15e-01 0.119 0.0755 0.455 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 399217 sc-eQTL 8.45e-01 -0.0136 0.0695 0.455 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 734664 sc-eQTL 2.89e-01 0.0631 0.0593 0.455 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -313631 sc-eQTL 8.44e-01 0.0146 0.0741 0.455 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000059758 CDK17 193112 eQTL 3.42e-02 0.025 0.0118 0.0 0.0 0.451
ENSG00000188596 CFAP54 104017 eQTL 0.00317 0.0588 0.0199 0.0 0.0 0.451

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188596 CFAP54 104017 4.53e-06 4.86e-06 7.1e-07 2.76e-06 1.62e-06 1.72e-06 4.66e-06 1.09e-06 5.09e-06 2.44e-06 5.32e-06 3.28e-06 7.36e-06 2.31e-06 1.31e-06 3.85e-06 1.84e-06 3.83e-06 1.57e-06 1.21e-06 2.88e-06 4.86e-06 4.62e-06 1.68e-06 6.39e-06 1.99e-06 2.45e-06 1.79e-06 4.41e-06 4.43e-06 2.75e-06 4.02e-07 7.21e-07 1.83e-06 2.09e-06 1.17e-06 1.06e-06 4.39e-07 8.38e-07 5.97e-07 7.59e-07 5.62e-06 3.65e-07 1.64e-07 7.84e-07 1.22e-06 1.11e-06 7.5e-07 4.67e-07