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Genes within 1Mb (chr12:96581673:AAT:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 181193 sc-eQTL 3.76e-01 -0.0407 0.0459 0.37 B L1
ENSG00000111144 LTA4H 538153 sc-eQTL 1.43e-01 -0.0836 0.0568 0.37 B L1
ENSG00000111145 ELK3 387298 sc-eQTL 4.72e-01 -0.0438 0.0608 0.37 B L1
ENSG00000139343 SNRPF 722745 sc-eQTL 3.68e-01 -0.0497 0.0552 0.37 B L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 1.67e-01 0.111 0.0803 0.37 B L1
ENSG00000059758 CDK17 181193 sc-eQTL 8.55e-01 -0.00689 0.0377 0.37 CD4T L1
ENSG00000111144 LTA4H 538153 sc-eQTL 6.59e-01 0.0229 0.0517 0.37 CD4T L1
ENSG00000111145 ELK3 387298 sc-eQTL 4.52e-01 0.0421 0.056 0.37 CD4T L1
ENSG00000139343 SNRPF 722745 sc-eQTL 9.19e-01 0.005 0.049 0.37 CD4T L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 6.88e-01 0.0243 0.0603 0.37 CD4T L1
ENSG00000059758 CDK17 181193 sc-eQTL 8.55e-01 0.00708 0.0386 0.37 CD8T L1
ENSG00000111144 LTA4H 538153 sc-eQTL 9.81e-01 -0.000969 0.0414 0.37 CD8T L1
ENSG00000111145 ELK3 387298 sc-eQTL 2.98e-01 0.0649 0.0622 0.37 CD8T L1
ENSG00000139343 SNRPF 722745 sc-eQTL 5.18e-01 -0.033 0.0511 0.37 CD8T L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 1.57e-01 0.0961 0.0676 0.37 CD8T L1
ENSG00000059758 CDK17 181193 sc-eQTL 9.39e-01 -0.00566 0.0741 0.369 DC L1
ENSG00000084110 HAL 585308 sc-eQTL 2.49e-01 0.0971 0.0841 0.369 DC L1
ENSG00000111144 LTA4H 538153 sc-eQTL 4.24e-02 -0.139 0.0683 0.369 DC L1
ENSG00000111145 ELK3 387298 sc-eQTL 7.43e-02 0.15 0.0838 0.369 DC L1
ENSG00000139343 SNRPF 722745 sc-eQTL 1.97e-01 -0.0905 0.07 0.369 DC L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 1.68e-01 0.124 0.0898 0.369 DC L1
ENSG00000257715 AC007298.1 556350 sc-eQTL 7.21e-01 0.0292 0.0814 0.369 DC L1
ENSG00000059758 CDK17 181193 sc-eQTL 8.44e-01 0.0116 0.0587 0.37 Mono L1
ENSG00000084110 HAL 585308 sc-eQTL 5.16e-01 -0.0481 0.0739 0.37 Mono L1
ENSG00000111144 LTA4H 538153 sc-eQTL 8.31e-02 -0.144 0.083 0.37 Mono L1
ENSG00000111145 ELK3 387298 sc-eQTL 9.11e-01 -0.00631 0.0561 0.37 Mono L1
ENSG00000139343 SNRPF 722745 sc-eQTL 3.48e-01 0.0496 0.0528 0.37 Mono L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 8.58e-02 0.139 0.0807 0.37 Mono L1
ENSG00000257715 AC007298.1 556350 sc-eQTL 7.62e-02 -0.139 0.0781 0.37 Mono L1
ENSG00000059758 CDK17 181193 sc-eQTL 1.78e-02 -0.103 0.0433 0.367 NK L1
ENSG00000111144 LTA4H 538153 sc-eQTL 2.03e-01 0.0946 0.0742 0.367 NK L1
ENSG00000111145 ELK3 387298 sc-eQTL 7.77e-01 -0.0201 0.0706 0.367 NK L1
ENSG00000139343 SNRPF 722745 sc-eQTL 6.72e-01 -0.0248 0.0585 0.367 NK L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 5.90e-01 0.04 0.0741 0.367 NK L1
ENSG00000059758 CDK17 181193 sc-eQTL 1.67e-01 -0.05 0.0361 0.37 Other_T L1
ENSG00000074527 NTN4 790521 sc-eQTL 4.92e-01 0.0462 0.067 0.37 Other_T L1
ENSG00000111144 LTA4H 538153 sc-eQTL 2.03e-01 0.0965 0.0755 0.37 Other_T L1
ENSG00000111145 ELK3 387298 sc-eQTL 5.40e-01 0.0363 0.0591 0.37 Other_T L1
ENSG00000139343 SNRPF 722745 sc-eQTL 6.57e-01 -0.0244 0.055 0.37 Other_T L1
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.50e-01 0.0782 0.0836 0.37 Other_T L1
ENSG00000188596 CFAP54 92102 sc-eQTL 2.87e-01 0.0924 0.0865 0.37 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 181193 sc-eQTL 5.75e-01 -0.0477 0.085 0.375 B_Activated L2
ENSG00000111144 LTA4H 538153 sc-eQTL 2.67e-01 -0.107 0.096 0.375 B_Activated L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.79e-01 -0.0422 0.102 0.375 B_Activated L2
ENSG00000139343 SNRPF 722745 sc-eQTL 4.32e-01 -0.0756 0.096 0.375 B_Activated L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 4.44e-01 0.077 0.1 0.375 B_Activated L2
ENSG00000059758 CDK17 181193 sc-eQTL 1.91e-01 -0.0954 0.0726 0.371 B_Intermediate L2
ENSG00000111144 LTA4H 538153 sc-eQTL 1.99e-01 -0.0907 0.0704 0.371 B_Intermediate L2
ENSG00000111145 ELK3 387298 sc-eQTL 4.72e-01 0.0574 0.0796 0.371 B_Intermediate L2
ENSG00000139343 SNRPF 722745 sc-eQTL 5.55e-01 -0.0469 0.0793 0.371 B_Intermediate L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 4.77e-01 -0.0661 0.0928 0.371 B_Intermediate L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.62e-01 0.0214 0.0704 0.366 B_Memory L2
ENSG00000111144 LTA4H 538153 sc-eQTL 5.71e-01 0.0461 0.0812 0.366 B_Memory L2
ENSG00000111145 ELK3 387298 sc-eQTL 1.46e-01 -0.116 0.0795 0.366 B_Memory L2
ENSG00000139343 SNRPF 722745 sc-eQTL 7.64e-01 0.0254 0.0846 0.366 B_Memory L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.01e-01 -0.0969 0.0934 0.366 B_Memory L2
ENSG00000059758 CDK17 181193 sc-eQTL 6.19e-01 -0.0286 0.0576 0.37 B_Naive1 L2
ENSG00000111144 LTA4H 538153 sc-eQTL 4.05e-01 -0.0503 0.0602 0.37 B_Naive1 L2
ENSG00000111145 ELK3 387298 sc-eQTL 2.10e-01 -0.0894 0.071 0.37 B_Naive1 L2
ENSG00000139343 SNRPF 722745 sc-eQTL 7.54e-02 -0.123 0.0688 0.37 B_Naive1 L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 4.23e-01 0.0714 0.0888 0.37 B_Naive1 L2
ENSG00000059758 CDK17 181193 sc-eQTL 5.28e-01 -0.047 0.0743 0.369 B_Naive2 L2
ENSG00000111144 LTA4H 538153 sc-eQTL 5.47e-01 -0.0424 0.0704 0.369 B_Naive2 L2
ENSG00000111145 ELK3 387298 sc-eQTL 5.34e-01 0.0517 0.083 0.369 B_Naive2 L2
ENSG00000139343 SNRPF 722745 sc-eQTL 2.47e-01 -0.0954 0.0822 0.369 B_Naive2 L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.76e-01 0.0868 0.0979 0.369 B_Naive2 L2
ENSG00000059758 CDK17 181193 sc-eQTL 9.00e-01 0.00852 0.0676 0.361 CD4_CTL L2
ENSG00000111144 LTA4H 538153 sc-eQTL 3.56e-03 0.275 0.0934 0.361 CD4_CTL L2
ENSG00000111145 ELK3 387298 sc-eQTL 8.53e-01 0.0179 0.0966 0.361 CD4_CTL L2
ENSG00000139343 SNRPF 722745 sc-eQTL 1.72e-01 -0.115 0.0836 0.361 CD4_CTL L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 6.59e-01 0.0429 0.097 0.361 CD4_CTL L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.59e-01 -0.0127 0.0413 0.37 CD4_Naive L2
ENSG00000111144 LTA4H 538153 sc-eQTL 5.44e-01 0.0363 0.0597 0.37 CD4_Naive L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.37e-01 0.0282 0.0597 0.37 CD4_Naive L2
ENSG00000139343 SNRPF 722745 sc-eQTL 9.16e-01 -0.00563 0.0531 0.37 CD4_Naive L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.00e-01 0.0836 0.0651 0.37 CD4_Naive L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.84e-01 0.0111 0.0402 0.37 CD4_TCM L2
ENSG00000111144 LTA4H 538153 sc-eQTL 3.34e-01 0.066 0.0681 0.37 CD4_TCM L2
ENSG00000111145 ELK3 387298 sc-eQTL 5.89e-01 0.0363 0.0671 0.37 CD4_TCM L2
ENSG00000139343 SNRPF 722745 sc-eQTL 3.27e-01 0.054 0.055 0.37 CD4_TCM L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.66e-01 -0.0836 0.075 0.37 CD4_TCM L2
ENSG00000059758 CDK17 181193 sc-eQTL 3.28e-01 -0.0488 0.0498 0.37 CD4_TEM L2
ENSG00000111144 LTA4H 538153 sc-eQTL 8.77e-02 -0.131 0.0765 0.37 CD4_TEM L2
ENSG00000111145 ELK3 387298 sc-eQTL 9.77e-01 0.00206 0.0716 0.37 CD4_TEM L2
ENSG00000139343 SNRPF 722745 sc-eQTL 6.35e-02 0.139 0.0744 0.37 CD4_TEM L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.58e-01 0.0818 0.0887 0.37 CD4_TEM L2
ENSG00000059758 CDK17 181193 sc-eQTL 1.77e-01 -0.0648 0.0479 0.37 CD8_CTL L2
ENSG00000111144 LTA4H 538153 sc-eQTL 9.72e-01 -0.00305 0.0868 0.37 CD8_CTL L2
ENSG00000111145 ELK3 387298 sc-eQTL 5.73e-01 -0.0446 0.079 0.37 CD8_CTL L2
ENSG00000139343 SNRPF 722745 sc-eQTL 7.71e-01 0.0211 0.0727 0.37 CD8_CTL L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.20e-01 0.0999 0.0812 0.37 CD8_CTL L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.93e-01 0.0152 0.0578 0.37 CD8_Naive L2
ENSG00000111144 LTA4H 538153 sc-eQTL 7.95e-01 -0.018 0.0693 0.37 CD8_Naive L2
ENSG00000111145 ELK3 387298 sc-eQTL 1.09e-01 0.117 0.0729 0.37 CD8_Naive L2
ENSG00000139343 SNRPF 722745 sc-eQTL 2.27e-02 -0.149 0.0651 0.37 CD8_Naive L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 7.38e-01 0.0263 0.0784 0.37 CD8_Naive L2
ENSG00000059758 CDK17 181193 sc-eQTL 2.92e-01 -0.067 0.0635 0.373 CD8_TCM L2
ENSG00000111144 LTA4H 538153 sc-eQTL 7.80e-01 0.0261 0.0935 0.373 CD8_TCM L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.22e-01 0.0391 0.0792 0.373 CD8_TCM L2
ENSG00000139343 SNRPF 722745 sc-eQTL 4.58e-01 -0.0677 0.0911 0.373 CD8_TCM L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.12e-01 0.111 0.089 0.373 CD8_TCM L2
ENSG00000059758 CDK17 181193 sc-eQTL 4.59e-01 0.0597 0.0805 0.372 CD8_TEM L2
ENSG00000111144 LTA4H 538153 sc-eQTL 9.87e-01 -0.00157 0.0987 0.372 CD8_TEM L2
ENSG00000111145 ELK3 387298 sc-eQTL 9.58e-01 -0.00506 0.0971 0.372 CD8_TEM L2
ENSG00000139343 SNRPF 722745 sc-eQTL 4.41e-01 0.0695 0.0901 0.372 CD8_TEM L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.33e-01 0.0948 0.0977 0.372 CD8_TEM L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.93e-01 0.0139 0.0526 0.368 MAIT L2
ENSG00000074527 NTN4 790521 sc-eQTL 4.80e-01 0.0501 0.0709 0.368 MAIT L2
ENSG00000111144 LTA4H 538153 sc-eQTL 1.37e-01 0.121 0.0809 0.368 MAIT L2
ENSG00000111145 ELK3 387298 sc-eQTL 4.72e-01 0.0491 0.0682 0.368 MAIT L2
ENSG00000139343 SNRPF 722745 sc-eQTL 6.00e-01 0.0416 0.079 0.368 MAIT L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.65e-01 0.0989 0.0885 0.368 MAIT L2
ENSG00000188596 CFAP54 92102 sc-eQTL 2.49e-01 0.101 0.0877 0.368 MAIT L2
ENSG00000059758 CDK17 181193 sc-eQTL 4.70e-03 -0.159 0.0557 0.364 NK_CD56bright L2
ENSG00000111144 LTA4H 538153 sc-eQTL 8.87e-01 -0.012 0.0841 0.364 NK_CD56bright L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.95e-01 -0.035 0.0892 0.364 NK_CD56bright L2
ENSG00000139343 SNRPF 722745 sc-eQTL 2.26e-02 -0.212 0.0921 0.364 NK_CD56bright L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 9.72e-01 -0.00329 0.0942 0.364 NK_CD56bright L2
ENSG00000059758 CDK17 181193 sc-eQTL 1.77e-02 -0.111 0.0464 0.364 NK_CD56dim L2
ENSG00000111144 LTA4H 538153 sc-eQTL 3.66e-01 0.0769 0.0848 0.364 NK_CD56dim L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.00e-01 -0.0395 0.0752 0.364 NK_CD56dim L2
ENSG00000139343 SNRPF 722745 sc-eQTL 2.28e-01 0.0863 0.0713 0.364 NK_CD56dim L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 6.59e-01 0.0364 0.0824 0.364 NK_CD56dim L2
ENSG00000059758 CDK17 181193 sc-eQTL 2.47e-01 -0.0853 0.0735 0.363 NK_HLA L2
ENSG00000111144 LTA4H 538153 sc-eQTL 1.39e-01 0.143 0.0962 0.363 NK_HLA L2
ENSG00000111145 ELK3 387298 sc-eQTL 8.97e-01 -0.0116 0.0897 0.363 NK_HLA L2
ENSG00000139343 SNRPF 722745 sc-eQTL 6.42e-02 -0.172 0.0927 0.363 NK_HLA L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.04e-01 0.0909 0.0882 0.363 NK_HLA L2
ENSG00000059758 CDK17 181193 sc-eQTL 2.06e-01 -0.0649 0.0512 0.364 NK_cytokine L2
ENSG00000111144 LTA4H 538153 sc-eQTL 6.70e-01 0.0371 0.0868 0.364 NK_cytokine L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.90e-01 0.0332 0.0831 0.364 NK_cytokine L2
ENSG00000139343 SNRPF 722745 sc-eQTL 1.32e-01 -0.106 0.07 0.364 NK_cytokine L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 5.38e-01 -0.0536 0.087 0.364 NK_cytokine L2
ENSG00000059758 CDK17 181193 sc-eQTL 3.45e-01 0.0969 0.102 0.37 PB L2
ENSG00000111144 LTA4H 538153 sc-eQTL 2.86e-01 0.0964 0.09 0.37 PB L2
ENSG00000111145 ELK3 387298 sc-eQTL 2.15e-01 -0.143 0.115 0.37 PB L2
ENSG00000139343 SNRPF 722745 sc-eQTL 6.93e-01 0.0447 0.113 0.37 PB L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.69e-01 0.121 0.134 0.37 PB L2
ENSG00000059758 CDK17 181193 sc-eQTL 5.53e-01 0.0339 0.0571 0.372 Pro_T L2
ENSG00000074527 NTN4 790521 sc-eQTL 2.35e-01 0.0762 0.0639 0.372 Pro_T L2
ENSG00000111144 LTA4H 538153 sc-eQTL 4.93e-01 0.0518 0.0754 0.372 Pro_T L2
ENSG00000111145 ELK3 387298 sc-eQTL 7.22e-01 0.0325 0.0912 0.372 Pro_T L2
ENSG00000139343 SNRPF 722745 sc-eQTL 3.52e-01 0.0535 0.0574 0.372 Pro_T L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 7.09e-01 -0.0312 0.0835 0.372 Pro_T L2
ENSG00000188596 CFAP54 92102 sc-eQTL 5.96e-01 0.0358 0.0676 0.372 Pro_T L2
ENSG00000059758 CDK17 181193 sc-eQTL 7.58e-01 0.0194 0.0627 0.37 Treg L2
ENSG00000111144 LTA4H 538153 sc-eQTL 3.67e-01 0.0718 0.0793 0.37 Treg L2
ENSG00000111145 ELK3 387298 sc-eQTL 7.02e-01 0.0276 0.072 0.37 Treg L2
ENSG00000139343 SNRPF 722745 sc-eQTL 5.42e-02 -0.16 0.0827 0.37 Treg L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 7.89e-02 -0.163 0.0924 0.37 Treg L2
ENSG00000059758 CDK17 181193 sc-eQTL 1.18e-01 -0.124 0.0788 0.371 cDC L2
ENSG00000084110 HAL 585308 sc-eQTL 9.75e-02 0.136 0.0819 0.371 cDC L2
ENSG00000111144 LTA4H 538153 sc-eQTL 9.57e-03 -0.182 0.0694 0.371 cDC L2
ENSG00000111145 ELK3 387298 sc-eQTL 4.30e-02 0.188 0.0923 0.371 cDC L2
ENSG00000139343 SNRPF 722745 sc-eQTL 2.97e-01 -0.0815 0.0779 0.371 cDC L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 1.13e-01 0.15 0.0945 0.371 cDC L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 3.61e-01 -0.0734 0.0801 0.371 cDC L2
ENSG00000059758 CDK17 181193 sc-eQTL 3.75e-01 0.0598 0.0673 0.37 cMono_IL1B L2
ENSG00000084110 HAL 585308 sc-eQTL 7.90e-01 -0.0196 0.0735 0.37 cMono_IL1B L2
ENSG00000111144 LTA4H 538153 sc-eQTL 5.71e-02 -0.151 0.0787 0.37 cMono_IL1B L2
ENSG00000111145 ELK3 387298 sc-eQTL 2.90e-01 0.0648 0.061 0.37 cMono_IL1B L2
ENSG00000139343 SNRPF 722745 sc-eQTL 3.41e-01 0.0601 0.063 0.37 cMono_IL1B L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 7.88e-03 0.229 0.0855 0.37 cMono_IL1B L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 4.43e-02 -0.163 0.0803 0.37 cMono_IL1B L2
ENSG00000059758 CDK17 181193 sc-eQTL 6.85e-01 0.0311 0.0764 0.37 cMono_S100A L2
ENSG00000084110 HAL 585308 sc-eQTL 4.05e-01 -0.0715 0.0856 0.37 cMono_S100A L2
ENSG00000111144 LTA4H 538153 sc-eQTL 2.03e-01 -0.109 0.0853 0.37 cMono_S100A L2
ENSG00000111145 ELK3 387298 sc-eQTL 3.42e-01 -0.0663 0.0696 0.37 cMono_S100A L2
ENSG00000139343 SNRPF 722745 sc-eQTL 6.51e-01 -0.0312 0.0689 0.37 cMono_S100A L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.96e-01 0.079 0.0929 0.37 cMono_S100A L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 2.59e-01 -0.0989 0.0873 0.37 cMono_S100A L2
ENSG00000059758 CDK17 181193 sc-eQTL 3.67e-01 -0.0684 0.0756 0.37 gdT L2
ENSG00000074527 NTN4 790521 sc-eQTL 9.43e-01 -0.00623 0.087 0.37 gdT L2
ENSG00000111144 LTA4H 538153 sc-eQTL 4.10e-01 0.0936 0.113 0.37 gdT L2
ENSG00000111145 ELK3 387298 sc-eQTL 8.10e-01 -0.0253 0.105 0.37 gdT L2
ENSG00000139343 SNRPF 722745 sc-eQTL 1.72e-01 -0.138 0.101 0.37 gdT L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 7.07e-01 -0.0421 0.112 0.37 gdT L2
ENSG00000188596 CFAP54 92102 sc-eQTL 3.84e-01 -0.0855 0.0978 0.37 gdT L2
ENSG00000059758 CDK17 181193 sc-eQTL 1.24e-01 0.132 0.0852 0.373 intMono L2
ENSG00000084110 HAL 585308 sc-eQTL 1.06e-01 -0.14 0.0862 0.373 intMono L2
ENSG00000111144 LTA4H 538153 sc-eQTL 4.19e-01 -0.072 0.0888 0.373 intMono L2
ENSG00000111145 ELK3 387298 sc-eQTL 4.49e-01 -0.06 0.0791 0.373 intMono L2
ENSG00000139343 SNRPF 722745 sc-eQTL 1.02e-01 0.138 0.0841 0.373 intMono L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 5.44e-01 0.0534 0.0879 0.373 intMono L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 2.75e-01 -0.0966 0.0882 0.373 intMono L2
ENSG00000059758 CDK17 181193 sc-eQTL 4.50e-01 -0.0521 0.0688 0.378 ncMono L2
ENSG00000084110 HAL 585308 sc-eQTL 4.64e-01 0.0564 0.0768 0.378 ncMono L2
ENSG00000111144 LTA4H 538153 sc-eQTL 7.85e-01 0.0234 0.0857 0.378 ncMono L2
ENSG00000111145 ELK3 387298 sc-eQTL 6.19e-01 -0.0366 0.0736 0.378 ncMono L2
ENSG00000139343 SNRPF 722745 sc-eQTL 1.57e-01 0.106 0.0748 0.378 ncMono L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 8.42e-01 -0.0159 0.0799 0.378 ncMono L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 9.35e-01 0.00743 0.0911 0.378 ncMono L2
ENSG00000059758 CDK17 181193 sc-eQTL 2.11e-01 0.113 0.0897 0.37 pDC L2
ENSG00000084110 HAL 585308 sc-eQTL 5.31e-01 -0.0477 0.076 0.37 pDC L2
ENSG00000111144 LTA4H 538153 sc-eQTL 3.25e-02 -0.181 0.0839 0.37 pDC L2
ENSG00000111145 ELK3 387298 sc-eQTL 9.46e-01 0.0071 0.104 0.37 pDC L2
ENSG00000139343 SNRPF 722745 sc-eQTL 4.64e-01 -0.0667 0.0908 0.37 pDC L2
ENSG00000139350 NEDD1 -325550 sc-eQTL 5.96e-01 0.0533 0.1 0.37 pDC L2
ENSG00000257715 AC007298.1 556350 sc-eQTL 9.07e-01 0.0101 0.086 0.37 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 181193 sc-eQTL 3.13e-01 -0.0612 0.0606 0.37 B_Memory LOneK1K
ENSG00000111144 LTA4H 538153 sc-eQTL 3.51e-01 -0.0589 0.0629 0.37 B_Memory LOneK1K
ENSG00000111145 ELK3 387298 sc-eQTL 7.65e-01 -0.0215 0.0721 0.37 B_Memory LOneK1K
ENSG00000139343 SNRPF 722745 sc-eQTL 6.41e-01 -0.0326 0.0698 0.37 B_Memory LOneK1K
ENSG00000139350 NEDD1 -325550 sc-eQTL 3.72e-01 -0.0818 0.0914 0.37 B_Memory LOneK1K
ENSG00000059758 CDK17 181193 sc-eQTL 3.64e-01 -0.0471 0.0518 0.37 B_Naive LOneK1K
ENSG00000111144 LTA4H 538153 sc-eQTL 1.11e-01 -0.0928 0.0579 0.37 B_Naive LOneK1K
ENSG00000111145 ELK3 387298 sc-eQTL 9.31e-01 -0.00574 0.0663 0.37 B_Naive LOneK1K
ENSG00000139343 SNRPF 722745 sc-eQTL 2.79e-01 -0.0723 0.0666 0.37 B_Naive LOneK1K
ENSG00000139350 NEDD1 -325550 sc-eQTL 2.34e-01 0.105 0.0881 0.37 B_Naive LOneK1K
ENSG00000059758 CDK17 181193 sc-eQTL 4.87e-01 0.0422 0.0606 0.37 CD14_Mono LOneK1K
ENSG00000084110 HAL 585308 sc-eQTL 7.44e-01 -0.024 0.0735 0.37 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 538153 sc-eQTL 8.30e-02 -0.14 0.0801 0.37 CD14_Mono LOneK1K
ENSG00000111145 ELK3 387298 sc-eQTL 9.17e-01 -0.00608 0.0583 0.37 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 722745 sc-eQTL 5.54e-01 0.0333 0.0562 0.37 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -325550 sc-eQTL 4.64e-02 0.175 0.0874 0.37 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 556350 sc-eQTL 9.13e-02 -0.138 0.0812 0.37 CD14_Mono LOneK1K
ENSG00000059758 CDK17 181193 sc-eQTL 7.49e-01 0.0202 0.0632 0.366 CD16_Mono LOneK1K
ENSG00000084110 HAL 585308 sc-eQTL 7.75e-01 -0.0214 0.0747 0.366 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 538153 sc-eQTL 6.84e-01 -0.0338 0.0828 0.366 CD16_Mono LOneK1K
ENSG00000111145 ELK3 387298 sc-eQTL 8.35e-01 -0.0128 0.0613 0.366 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 722745 sc-eQTL 4.34e-02 0.127 0.0626 0.366 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -325550 sc-eQTL 8.58e-01 0.0145 0.081 0.366 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 556350 sc-eQTL 9.84e-01 -0.00174 0.0858 0.366 CD16_Mono LOneK1K
ENSG00000059758 CDK17 181193 sc-eQTL 3.23e-02 -0.0943 0.0438 0.364 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 538153 sc-eQTL 9.85e-02 0.127 0.0765 0.364 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 387298 sc-eQTL 8.82e-01 -0.0105 0.0704 0.364 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 722745 sc-eQTL 9.93e-01 -0.000561 0.0603 0.364 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -325550 sc-eQTL 6.60e-01 0.0331 0.0751 0.364 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 \N -325550 1.29e-06 4.93e-07 1.59e-07 4.4e-07 1.01e-07 4.39e-07 8.73e-07 5.2e-08 5.02e-07 1.37e-07 5.58e-07 3.21e-07 9.23e-07 8.15e-08 5.43e-08 1.76e-07 4.17e-08 3.02e-07 3.43e-07 7.49e-08 1.59e-07 5.66e-07 8.95e-07 4.17e-08 6.39e-07 1.51e-07 1.74e-07 1.52e-07 7.45e-07 5.99e-07 2.54e-07 3.72e-08 4.76e-08 1.71e-07 3.04e-07 2.85e-08 4.41e-08 7.75e-08 5.27e-08 5.24e-08 4.92e-08 1.49e-06 2.28e-08 1.97e-08 8.03e-08 2.07e-08 1.22e-07 4.26e-09 4.91e-08
ENSG00000188596 \N 92098 1.26e-05 4.86e-06 1.56e-06 3.37e-06 1.1e-06 4.14e-06 8.03e-06 4.05e-07 4.96e-06 1.83e-06 5.69e-06 3.41e-06 7.27e-06 1.42e-06 6.94e-07 2.38e-06 1.37e-06 2.7e-06 1.63e-06 1.15e-06 1.57e-06 5.44e-06 7.37e-06 1.76e-06 6.24e-06 1.22e-06 1.56e-06 1.81e-06 6.27e-06 4.99e-06 2.01e-06 6.58e-08 6.45e-07 1.77e-06 2.03e-06 9.35e-07 6.81e-07 4.26e-07 5.18e-07 2.09e-07 2.6e-07 1e-05 6.31e-07 1.66e-07 1.69e-07 9.82e-07 2.29e-07 7.69e-08 1.56e-07