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Genes within 1Mb (chr12:96569314:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 168834 sc-eQTL 1.18e-01 -0.0852 0.0542 0.778 B L1
ENSG00000111144 LTA4H 525794 sc-eQTL 2.24e-01 0.0822 0.0675 0.778 B L1
ENSG00000111145 ELK3 374939 sc-eQTL 3.66e-01 -0.0652 0.0719 0.778 B L1
ENSG00000139343 SNRPF 710386 sc-eQTL 8.10e-01 -0.0157 0.0655 0.778 B L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.06e-01 -0.154 0.095 0.778 B L1
ENSG00000059758 CDK17 168834 sc-eQTL 5.44e-02 -0.0852 0.0441 0.778 CD4T L1
ENSG00000111144 LTA4H 525794 sc-eQTL 6.93e-01 -0.0241 0.061 0.778 CD4T L1
ENSG00000111145 ELK3 374939 sc-eQTL 7.19e-01 0.0238 0.0661 0.778 CD4T L1
ENSG00000139343 SNRPF 710386 sc-eQTL 2.71e-01 -0.0636 0.0576 0.778 CD4T L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 3.13e-01 0.0719 0.071 0.778 CD4T L1
ENSG00000059758 CDK17 168834 sc-eQTL 2.76e-02 -0.101 0.0453 0.778 CD8T L1
ENSG00000111144 LTA4H 525794 sc-eQTL 7.95e-01 0.0128 0.0492 0.778 CD8T L1
ENSG00000111145 ELK3 374939 sc-eQTL 9.18e-01 -0.00765 0.0741 0.778 CD8T L1
ENSG00000139343 SNRPF 710386 sc-eQTL 3.13e-01 0.0613 0.0606 0.778 CD8T L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 7.95e-01 0.021 0.0807 0.778 CD8T L1
ENSG00000059758 CDK17 168834 sc-eQTL 1.36e-01 -0.129 0.0859 0.775 DC L1
ENSG00000084110 HAL 572949 sc-eQTL 5.95e-01 -0.0523 0.0982 0.775 DC L1
ENSG00000111144 LTA4H 525794 sc-eQTL 7.46e-01 0.026 0.0804 0.775 DC L1
ENSG00000111145 ELK3 374939 sc-eQTL 1.21e-01 -0.152 0.0978 0.775 DC L1
ENSG00000139343 SNRPF 710386 sc-eQTL 4.73e-01 0.0588 0.0818 0.775 DC L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 5.01e-01 -0.0707 0.105 0.775 DC L1
ENSG00000257715 AC007298.1 543991 sc-eQTL 1.99e-01 -0.122 0.0945 0.775 DC L1
ENSG00000059758 CDK17 168834 sc-eQTL 4.93e-01 -0.0469 0.0683 0.778 Mono L1
ENSG00000084110 HAL 572949 sc-eQTL 5.19e-01 -0.0556 0.0861 0.778 Mono L1
ENSG00000111144 LTA4H 525794 sc-eQTL 1.27e-01 0.148 0.0967 0.778 Mono L1
ENSG00000111145 ELK3 374939 sc-eQTL 5.45e-01 -0.0395 0.0653 0.778 Mono L1
ENSG00000139343 SNRPF 710386 sc-eQTL 9.54e-01 0.00359 0.0616 0.778 Mono L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.13e-02 -0.238 0.0931 0.778 Mono L1
ENSG00000257715 AC007298.1 543991 sc-eQTL 3.05e-01 0.0939 0.0914 0.778 Mono L1
ENSG00000059758 CDK17 168834 sc-eQTL 3.43e-01 0.0487 0.0513 0.777 NK L1
ENSG00000111144 LTA4H 525794 sc-eQTL 6.19e-01 -0.0435 0.0871 0.777 NK L1
ENSG00000111145 ELK3 374939 sc-eQTL 4.29e-01 -0.0654 0.0826 0.777 NK L1
ENSG00000139343 SNRPF 710386 sc-eQTL 8.90e-01 -0.00953 0.0686 0.777 NK L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.64e-01 -0.121 0.0864 0.777 NK L1
ENSG00000059758 CDK17 168834 sc-eQTL 4.85e-01 0.0305 0.0435 0.778 Other_T L1
ENSG00000074527 NTN4 778162 sc-eQTL 4.06e-01 -0.0669 0.0804 0.778 Other_T L1
ENSG00000111144 LTA4H 525794 sc-eQTL 9.65e-01 0.00399 0.0911 0.778 Other_T L1
ENSG00000111145 ELK3 374939 sc-eQTL 8.87e-01 -0.0101 0.0711 0.778 Other_T L1
ENSG00000139343 SNRPF 710386 sc-eQTL 8.83e-01 0.00973 0.066 0.778 Other_T L1
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.08e-01 -0.0832 0.1 0.778 Other_T L1
ENSG00000188596 CFAP54 79743 sc-eQTL 2.83e-01 0.112 0.104 0.778 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 168834 sc-eQTL 9.87e-01 0.00157 0.0975 0.77 B_Activated L2
ENSG00000111144 LTA4H 525794 sc-eQTL 3.04e-01 0.113 0.11 0.77 B_Activated L2
ENSG00000111145 ELK3 374939 sc-eQTL 3.00e-01 0.121 0.117 0.77 B_Activated L2
ENSG00000139343 SNRPF 710386 sc-eQTL 2.79e-01 0.119 0.11 0.77 B_Activated L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 5.76e-01 -0.0645 0.115 0.77 B_Activated L2
ENSG00000059758 CDK17 168834 sc-eQTL 5.67e-01 -0.0492 0.0859 0.777 B_Intermediate L2
ENSG00000111144 LTA4H 525794 sc-eQTL 8.86e-01 0.012 0.0832 0.777 B_Intermediate L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.77e-02 -0.165 0.0932 0.777 B_Intermediate L2
ENSG00000139343 SNRPF 710386 sc-eQTL 7.15e-01 -0.0341 0.0935 0.777 B_Intermediate L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 8.03e-01 -0.0273 0.11 0.777 B_Intermediate L2
ENSG00000059758 CDK17 168834 sc-eQTL 7.89e-01 -0.0224 0.0833 0.782 B_Memory L2
ENSG00000111144 LTA4H 525794 sc-eQTL 1.05e-01 -0.156 0.0956 0.782 B_Memory L2
ENSG00000111145 ELK3 374939 sc-eQTL 3.64e-01 0.0859 0.0944 0.782 B_Memory L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.76e-01 -0.0562 0.1 0.782 B_Memory L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.97e-02 0.217 0.11 0.782 B_Memory L2
ENSG00000059758 CDK17 168834 sc-eQTL 5.99e-02 -0.128 0.0676 0.778 B_Naive1 L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.54e-01 0.032 0.0713 0.778 B_Naive1 L2
ENSG00000111145 ELK3 374939 sc-eQTL 4.72e-01 -0.0608 0.0843 0.778 B_Naive1 L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.45e-01 0.0497 0.082 0.778 B_Naive1 L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 6.95e-01 0.0414 0.105 0.778 B_Naive1 L2
ENSG00000059758 CDK17 168834 sc-eQTL 9.70e-01 0.00323 0.0866 0.779 B_Naive2 L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.52e-01 0.0371 0.082 0.779 B_Naive2 L2
ENSG00000111145 ELK3 374939 sc-eQTL 4.67e-01 -0.0704 0.0966 0.779 B_Naive2 L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.85e-01 0.0525 0.0959 0.779 B_Naive2 L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.39e-02 -0.279 0.113 0.779 B_Naive2 L2
ENSG00000059758 CDK17 168834 sc-eQTL 4.62e-01 -0.0579 0.0785 0.78 CD4_CTL L2
ENSG00000111144 LTA4H 525794 sc-eQTL 3.09e-01 -0.113 0.111 0.78 CD4_CTL L2
ENSG00000111145 ELK3 374939 sc-eQTL 6.59e-01 0.0496 0.112 0.78 CD4_CTL L2
ENSG00000139343 SNRPF 710386 sc-eQTL 6.95e-01 -0.0384 0.0976 0.78 CD4_CTL L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 3.42e-02 -0.238 0.112 0.78 CD4_CTL L2
ENSG00000059758 CDK17 168834 sc-eQTL 6.26e-02 -0.0906 0.0484 0.778 CD4_Naive L2
ENSG00000111144 LTA4H 525794 sc-eQTL 4.95e-01 -0.0482 0.0705 0.778 CD4_Naive L2
ENSG00000111145 ELK3 374939 sc-eQTL 9.26e-01 -0.00656 0.0706 0.778 CD4_Naive L2
ENSG00000139343 SNRPF 710386 sc-eQTL 3.38e-01 -0.0601 0.0626 0.778 CD4_Naive L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 8.10e-01 0.0186 0.0772 0.778 CD4_Naive L2
ENSG00000059758 CDK17 168834 sc-eQTL 1.17e-01 -0.0747 0.0474 0.778 CD4_TCM L2
ENSG00000111144 LTA4H 525794 sc-eQTL 5.52e-01 -0.0482 0.0808 0.778 CD4_TCM L2
ENSG00000111145 ELK3 374939 sc-eQTL 1.08e-01 0.128 0.0791 0.778 CD4_TCM L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.42e-01 -0.0399 0.0652 0.778 CD4_TCM L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 2.29e-01 0.107 0.0889 0.778 CD4_TCM L2
ENSG00000059758 CDK17 168834 sc-eQTL 7.63e-01 0.0177 0.0588 0.778 CD4_TEM L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.95e-01 0.0356 0.0907 0.778 CD4_TEM L2
ENSG00000111145 ELK3 374939 sc-eQTL 8.89e-01 0.0117 0.0843 0.778 CD4_TEM L2
ENSG00000139343 SNRPF 710386 sc-eQTL 1.01e-01 -0.144 0.0877 0.778 CD4_TEM L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 7.71e-01 -0.0305 0.105 0.778 CD4_TEM L2
ENSG00000059758 CDK17 168834 sc-eQTL 9.26e-01 0.00531 0.0571 0.778 CD8_CTL L2
ENSG00000111144 LTA4H 525794 sc-eQTL 4.08e-01 0.0854 0.103 0.778 CD8_CTL L2
ENSG00000111145 ELK3 374939 sc-eQTL 1.05e-01 0.152 0.0932 0.778 CD8_CTL L2
ENSG00000139343 SNRPF 710386 sc-eQTL 4.07e-01 0.0716 0.0861 0.778 CD8_CTL L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 2.88e-01 -0.103 0.0965 0.778 CD8_CTL L2
ENSG00000059758 CDK17 168834 sc-eQTL 6.88e-02 -0.125 0.0686 0.778 CD8_Naive L2
ENSG00000111144 LTA4H 525794 sc-eQTL 8.48e-01 0.0159 0.0828 0.778 CD8_Naive L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.07e-01 -0.0329 0.0876 0.778 CD8_Naive L2
ENSG00000139343 SNRPF 710386 sc-eQTL 6.29e-01 0.038 0.0787 0.778 CD8_Naive L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 9.40e-02 0.157 0.0931 0.778 CD8_Naive L2
ENSG00000059758 CDK17 168834 sc-eQTL 6.37e-01 0.0345 0.073 0.773 CD8_TCM L2
ENSG00000111144 LTA4H 525794 sc-eQTL 1.04e-01 -0.174 0.107 0.773 CD8_TCM L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.60e-01 -0.0278 0.0909 0.773 CD8_TCM L2
ENSG00000139343 SNRPF 710386 sc-eQTL 6.75e-01 0.044 0.105 0.773 CD8_TCM L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 7.69e-01 0.0301 0.102 0.773 CD8_TCM L2
ENSG00000059758 CDK17 168834 sc-eQTL 2.59e-01 -0.105 0.0928 0.779 CD8_TEM L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.88e-01 0.0459 0.114 0.779 CD8_TEM L2
ENSG00000111145 ELK3 374939 sc-eQTL 5.83e-01 0.0616 0.112 0.779 CD8_TEM L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.04e-01 0.0697 0.104 0.779 CD8_TEM L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 8.95e-01 0.0149 0.113 0.779 CD8_TEM L2
ENSG00000059758 CDK17 168834 sc-eQTL 4.93e-01 -0.0425 0.0618 0.777 MAIT L2
ENSG00000074527 NTN4 778162 sc-eQTL 3.18e-01 -0.0833 0.0832 0.777 MAIT L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.88e-01 -0.0384 0.0956 0.777 MAIT L2
ENSG00000111145 ELK3 374939 sc-eQTL 5.78e-01 -0.0447 0.0802 0.777 MAIT L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.34e-01 -0.0579 0.0929 0.777 MAIT L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 5.82e-01 0.0575 0.104 0.777 MAIT L2
ENSG00000188596 CFAP54 79743 sc-eQTL 8.42e-01 -0.0207 0.103 0.777 MAIT L2
ENSG00000059758 CDK17 168834 sc-eQTL 9.82e-02 0.11 0.0663 0.776 NK_CD56bright L2
ENSG00000111144 LTA4H 525794 sc-eQTL 7.39e-01 0.0329 0.0987 0.776 NK_CD56bright L2
ENSG00000111145 ELK3 374939 sc-eQTL 3.82e-01 -0.0916 0.105 0.776 NK_CD56bright L2
ENSG00000139343 SNRPF 710386 sc-eQTL 3.97e-01 0.0929 0.109 0.776 NK_CD56bright L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 9.98e-01 -0.000288 0.111 0.776 NK_CD56bright L2
ENSG00000059758 CDK17 168834 sc-eQTL 8.34e-01 0.0116 0.0554 0.778 NK_CD56dim L2
ENSG00000111144 LTA4H 525794 sc-eQTL 7.38e-01 -0.0336 0.1 0.778 NK_CD56dim L2
ENSG00000111145 ELK3 374939 sc-eQTL 5.52e-01 -0.0528 0.0886 0.778 NK_CD56dim L2
ENSG00000139343 SNRPF 710386 sc-eQTL 7.09e-01 -0.0315 0.0843 0.778 NK_CD56dim L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 3.85e-02 -0.2 0.0962 0.778 NK_CD56dim L2
ENSG00000059758 CDK17 168834 sc-eQTL 6.64e-01 0.0385 0.0884 0.779 NK_HLA L2
ENSG00000111144 LTA4H 525794 sc-eQTL 9.65e-01 0.00515 0.116 0.779 NK_HLA L2
ENSG00000111145 ELK3 374939 sc-eQTL 8.50e-01 -0.0204 0.108 0.779 NK_HLA L2
ENSG00000139343 SNRPF 710386 sc-eQTL 9.04e-01 -0.0136 0.112 0.779 NK_HLA L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.08e-01 -0.0878 0.106 0.779 NK_HLA L2
ENSG00000059758 CDK17 168834 sc-eQTL 5.07e-01 0.0403 0.0606 0.778 NK_cytokine L2
ENSG00000111144 LTA4H 525794 sc-eQTL 5.52e-01 0.0611 0.102 0.778 NK_cytokine L2
ENSG00000111145 ELK3 374939 sc-eQTL 6.18e-01 -0.0489 0.0981 0.778 NK_cytokine L2
ENSG00000139343 SNRPF 710386 sc-eQTL 9.40e-01 0.00629 0.0832 0.778 NK_cytokine L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.19e-01 0.0831 0.103 0.778 NK_cytokine L2
ENSG00000059758 CDK17 168834 sc-eQTL 1.39e-01 -0.184 0.123 0.793 PB L2
ENSG00000111144 LTA4H 525794 sc-eQTL 8.94e-01 -0.0147 0.11 0.793 PB L2
ENSG00000111145 ELK3 374939 sc-eQTL 4.72e-01 -0.101 0.141 0.793 PB L2
ENSG00000139343 SNRPF 710386 sc-eQTL 6.33e-01 -0.0658 0.137 0.793 PB L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 9.85e-01 -0.00311 0.163 0.793 PB L2
ENSG00000059758 CDK17 168834 sc-eQTL 9.89e-01 0.000919 0.0676 0.776 Pro_T L2
ENSG00000074527 NTN4 778162 sc-eQTL 1.30e-01 -0.115 0.0755 0.776 Pro_T L2
ENSG00000111144 LTA4H 525794 sc-eQTL 4.47e-01 0.0678 0.0891 0.776 Pro_T L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.94e-01 0.0282 0.108 0.776 Pro_T L2
ENSG00000139343 SNRPF 710386 sc-eQTL 7.46e-01 0.0221 0.068 0.776 Pro_T L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 5.18e-01 0.0639 0.0988 0.776 Pro_T L2
ENSG00000188596 CFAP54 79743 sc-eQTL 6.61e-01 0.035 0.0799 0.776 Pro_T L2
ENSG00000059758 CDK17 168834 sc-eQTL 9.80e-01 0.0018 0.0735 0.778 Treg L2
ENSG00000111144 LTA4H 525794 sc-eQTL 6.12e-01 -0.0473 0.0931 0.778 Treg L2
ENSG00000111145 ELK3 374939 sc-eQTL 3.57e-01 -0.0778 0.0842 0.778 Treg L2
ENSG00000139343 SNRPF 710386 sc-eQTL 1.93e-01 0.127 0.0973 0.778 Treg L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.75e-01 0.148 0.109 0.778 Treg L2
ENSG00000059758 CDK17 168834 sc-eQTL 6.41e-01 -0.0426 0.0913 0.776 cDC L2
ENSG00000084110 HAL 572949 sc-eQTL 8.31e-01 0.0203 0.0949 0.776 cDC L2
ENSG00000111144 LTA4H 525794 sc-eQTL 3.38e-01 0.078 0.0812 0.776 cDC L2
ENSG00000111145 ELK3 374939 sc-eQTL 4.00e-01 -0.0905 0.107 0.776 cDC L2
ENSG00000139343 SNRPF 710386 sc-eQTL 6.00e-01 0.0473 0.0899 0.776 cDC L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 7.38e-01 -0.0367 0.11 0.776 cDC L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 6.01e-01 -0.0483 0.0923 0.776 cDC L2
ENSG00000059758 CDK17 168834 sc-eQTL 1.63e-01 -0.11 0.0786 0.778 cMono_IL1B L2
ENSG00000084110 HAL 572949 sc-eQTL 6.38e-01 -0.0406 0.0861 0.778 cMono_IL1B L2
ENSG00000111144 LTA4H 525794 sc-eQTL 7.83e-02 0.163 0.0924 0.778 cMono_IL1B L2
ENSG00000111145 ELK3 374939 sc-eQTL 2.05e-01 -0.0908 0.0714 0.778 cMono_IL1B L2
ENSG00000139343 SNRPF 710386 sc-eQTL 5.71e-01 -0.0419 0.0739 0.778 cMono_IL1B L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 5.13e-03 -0.283 0.1 0.778 cMono_IL1B L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 5.21e-01 0.0611 0.095 0.778 cMono_IL1B L2
ENSG00000059758 CDK17 168834 sc-eQTL 2.52e-01 -0.102 0.0893 0.778 cMono_S100A L2
ENSG00000084110 HAL 572949 sc-eQTL 6.13e-01 0.0509 0.1 0.778 cMono_S100A L2
ENSG00000111144 LTA4H 525794 sc-eQTL 2.58e-01 0.114 0.1 0.778 cMono_S100A L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.91e-01 0.0217 0.0817 0.778 cMono_S100A L2
ENSG00000139343 SNRPF 710386 sc-eQTL 9.12e-01 0.00889 0.0808 0.778 cMono_S100A L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.67e-01 -0.15 0.109 0.778 cMono_S100A L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 7.05e-01 0.0389 0.103 0.778 cMono_S100A L2
ENSG00000059758 CDK17 168834 sc-eQTL 4.41e-01 0.0684 0.0885 0.767 gdT L2
ENSG00000074527 NTN4 778162 sc-eQTL 9.90e-01 -0.00126 0.102 0.767 gdT L2
ENSG00000111144 LTA4H 525794 sc-eQTL 3.15e-01 0.133 0.132 0.767 gdT L2
ENSG00000111145 ELK3 374939 sc-eQTL 8.07e-01 0.03 0.123 0.767 gdT L2
ENSG00000139343 SNRPF 710386 sc-eQTL 9.45e-01 -0.00812 0.119 0.767 gdT L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.37e-01 0.102 0.131 0.767 gdT L2
ENSG00000188596 CFAP54 79743 sc-eQTL 3.73e-01 0.102 0.114 0.767 gdT L2
ENSG00000059758 CDK17 168834 sc-eQTL 1.80e-01 -0.133 0.099 0.773 intMono L2
ENSG00000084110 HAL 572949 sc-eQTL 5.59e-01 0.0588 0.1 0.773 intMono L2
ENSG00000111144 LTA4H 525794 sc-eQTL 3.96e-01 0.0876 0.103 0.773 intMono L2
ENSG00000111145 ELK3 374939 sc-eQTL 3.98e-01 0.0777 0.0917 0.773 intMono L2
ENSG00000139343 SNRPF 710386 sc-eQTL 8.62e-02 -0.168 0.0975 0.773 intMono L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 3.40e-01 -0.0973 0.102 0.773 intMono L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 6.21e-01 0.0507 0.103 0.773 intMono L2
ENSG00000059758 CDK17 168834 sc-eQTL 5.95e-01 0.0423 0.0794 0.769 ncMono L2
ENSG00000084110 HAL 572949 sc-eQTL 2.02e-01 -0.113 0.0883 0.769 ncMono L2
ENSG00000111144 LTA4H 525794 sc-eQTL 4.93e-01 0.0678 0.0988 0.769 ncMono L2
ENSG00000111145 ELK3 374939 sc-eQTL 7.71e-01 -0.0247 0.0849 0.769 ncMono L2
ENSG00000139343 SNRPF 710386 sc-eQTL 4.50e-01 0.0655 0.0866 0.769 ncMono L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 8.63e-01 -0.0159 0.0921 0.769 ncMono L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 9.43e-01 0.00758 0.105 0.769 ncMono L2
ENSG00000059758 CDK17 168834 sc-eQTL 5.19e-02 -0.204 0.104 0.777 pDC L2
ENSG00000084110 HAL 572949 sc-eQTL 7.72e-01 0.0257 0.0888 0.777 pDC L2
ENSG00000111144 LTA4H 525794 sc-eQTL 2.24e-01 0.121 0.099 0.777 pDC L2
ENSG00000111145 ELK3 374939 sc-eQTL 4.82e-01 -0.0855 0.121 0.777 pDC L2
ENSG00000139343 SNRPF 710386 sc-eQTL 9.17e-01 -0.0111 0.106 0.777 pDC L2
ENSG00000139350 NEDD1 -337909 sc-eQTL 4.19e-01 -0.0947 0.117 0.777 pDC L2
ENSG00000257715 AC007298.1 543991 sc-eQTL 6.85e-01 0.0408 0.1 0.777 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 168834 sc-eQTL 4.41e-01 -0.0549 0.0711 0.778 B_Memory LOneK1K
ENSG00000111144 LTA4H 525794 sc-eQTL 9.27e-01 -0.00679 0.0739 0.778 B_Memory LOneK1K
ENSG00000111145 ELK3 374939 sc-eQTL 9.29e-01 -0.00754 0.0845 0.778 B_Memory LOneK1K
ENSG00000139343 SNRPF 710386 sc-eQTL 2.86e-01 -0.0873 0.0816 0.778 B_Memory LOneK1K
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.37e-01 0.159 0.107 0.778 B_Memory LOneK1K
ENSG00000059758 CDK17 168834 sc-eQTL 1.34e-01 -0.0915 0.0608 0.778 B_Naive LOneK1K
ENSG00000111144 LTA4H 525794 sc-eQTL 2.88e-01 0.0729 0.0684 0.778 B_Naive LOneK1K
ENSG00000111145 ELK3 374939 sc-eQTL 1.86e-01 -0.103 0.0778 0.778 B_Naive LOneK1K
ENSG00000139343 SNRPF 710386 sc-eQTL 6.30e-01 0.038 0.0786 0.778 B_Naive LOneK1K
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.79e-01 -0.14 0.104 0.778 B_Naive LOneK1K
ENSG00000059758 CDK17 168834 sc-eQTL 7.85e-02 -0.125 0.0708 0.778 CD14_Mono LOneK1K
ENSG00000084110 HAL 572949 sc-eQTL 6.71e-01 -0.0368 0.0864 0.778 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 525794 sc-eQTL 1.07e-01 0.153 0.0943 0.778 CD14_Mono LOneK1K
ENSG00000111145 ELK3 374939 sc-eQTL 6.35e-01 -0.0325 0.0685 0.778 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 710386 sc-eQTL 9.88e-01 0.00102 0.0661 0.778 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -337909 sc-eQTL 1.24e-02 -0.258 0.102 0.778 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 543991 sc-eQTL 3.15e-01 0.0966 0.0959 0.778 CD14_Mono LOneK1K
ENSG00000059758 CDK17 168834 sc-eQTL 6.08e-01 -0.0376 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000084110 HAL 572949 sc-eQTL 4.75e-01 -0.062 0.0866 0.776 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 525794 sc-eQTL 4.06e-01 0.0799 0.096 0.776 CD16_Mono LOneK1K
ENSG00000111145 ELK3 374939 sc-eQTL 8.10e-01 -0.0171 0.0711 0.776 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 710386 sc-eQTL 4.76e-01 -0.0523 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -337909 sc-eQTL 3.00e-01 -0.0976 0.0938 0.776 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 543991 sc-eQTL 8.97e-01 0.0129 0.0996 0.776 CD16_Mono LOneK1K
ENSG00000059758 CDK17 168834 sc-eQTL 8.37e-01 0.0108 0.0521 0.778 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 525794 sc-eQTL 6.04e-01 -0.047 0.0905 0.778 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 374939 sc-eQTL 3.65e-01 -0.0752 0.0827 0.778 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 710386 sc-eQTL 5.56e-01 -0.0418 0.0708 0.778 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -337909 sc-eQTL 2.23e-01 -0.108 0.0881 0.778 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -337909 eQTL 3.1600000000000003e-21 -0.257 0.0265 0.0 0.0 0.227
ENSG00000188596 CFAP54 79739 eQTL 2.26e-07 -0.119 0.0228 0.00687 0.0066 0.227

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -337909 1.29e-06 9.25e-07 3.27e-07 4.84e-07 3.4e-07 4.63e-07 1.13e-06 3.46e-07 1.2e-06 3.95e-07 1.41e-06 5.98e-07 1.67e-06 2.54e-07 5.08e-07 7.54e-07 8.4e-07 5.75e-07 5.7e-07 6.96e-07 4.44e-07 1.2e-06 8.03e-07 5.75e-07 1.98e-06 3.87e-07 7.31e-07 7.14e-07 1.05e-06 1.08e-06 5.26e-07 1.73e-07 1.98e-07 5.28e-07 4.34e-07 4.32e-07 4.12e-07 1.54e-07 2.94e-07 2.46e-07 2.84e-07 1.3e-06 6.94e-08 2.67e-08 1.73e-07 1.28e-07 2.37e-07 8.37e-08 1.05e-07
ENSG00000188596 CFAP54 79739 5.77e-06 7.85e-06 9.8e-07 3.82e-06 2.18e-06 2.59e-06 9.3e-06 1.59e-06 5.77e-06 4.1e-06 8.8e-06 3.89e-06 1.11e-05 3.27e-06 1.73e-06 5.34e-06 3.7e-06 3.94e-06 2.34e-06 2.59e-06 3.97e-06 7.65e-06 5.89e-06 2.78e-06 1.04e-05 2.84e-06 4.15e-06 2.99e-06 7.08e-06 7.79e-06 3.75e-06 6.32e-07 1.1e-06 2.86e-06 2.82e-06 2.07e-06 1.55e-06 1.46e-06 1.64e-06 1.03e-06 9.78e-07 8.29e-06 8.18e-07 1.61e-07 7.71e-07 1.32e-06 9.95e-07 7.32e-07 4.89e-07