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Genes within 1Mb (chr12:96563783:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 163303 sc-eQTL 1.18e-01 -0.0852 0.0542 0.778 B L1
ENSG00000111144 LTA4H 520263 sc-eQTL 2.24e-01 0.0822 0.0675 0.778 B L1
ENSG00000111145 ELK3 369408 sc-eQTL 3.66e-01 -0.0652 0.0719 0.778 B L1
ENSG00000139343 SNRPF 704855 sc-eQTL 8.10e-01 -0.0157 0.0655 0.778 B L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.06e-01 -0.154 0.095 0.778 B L1
ENSG00000059758 CDK17 163303 sc-eQTL 5.44e-02 -0.0852 0.0441 0.778 CD4T L1
ENSG00000111144 LTA4H 520263 sc-eQTL 6.93e-01 -0.0241 0.061 0.778 CD4T L1
ENSG00000111145 ELK3 369408 sc-eQTL 7.19e-01 0.0238 0.0661 0.778 CD4T L1
ENSG00000139343 SNRPF 704855 sc-eQTL 2.71e-01 -0.0636 0.0576 0.778 CD4T L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 3.13e-01 0.0719 0.071 0.778 CD4T L1
ENSG00000059758 CDK17 163303 sc-eQTL 2.76e-02 -0.101 0.0453 0.778 CD8T L1
ENSG00000111144 LTA4H 520263 sc-eQTL 7.95e-01 0.0128 0.0492 0.778 CD8T L1
ENSG00000111145 ELK3 369408 sc-eQTL 9.18e-01 -0.00765 0.0741 0.778 CD8T L1
ENSG00000139343 SNRPF 704855 sc-eQTL 3.13e-01 0.0613 0.0606 0.778 CD8T L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 7.95e-01 0.021 0.0807 0.778 CD8T L1
ENSG00000059758 CDK17 163303 sc-eQTL 1.36e-01 -0.129 0.0859 0.775 DC L1
ENSG00000084110 HAL 567418 sc-eQTL 5.95e-01 -0.0523 0.0982 0.775 DC L1
ENSG00000111144 LTA4H 520263 sc-eQTL 7.46e-01 0.026 0.0804 0.775 DC L1
ENSG00000111145 ELK3 369408 sc-eQTL 1.21e-01 -0.152 0.0978 0.775 DC L1
ENSG00000139343 SNRPF 704855 sc-eQTL 4.73e-01 0.0588 0.0818 0.775 DC L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 5.01e-01 -0.0707 0.105 0.775 DC L1
ENSG00000257715 AC007298.1 538460 sc-eQTL 1.99e-01 -0.122 0.0945 0.775 DC L1
ENSG00000059758 CDK17 163303 sc-eQTL 4.93e-01 -0.0469 0.0683 0.778 Mono L1
ENSG00000084110 HAL 567418 sc-eQTL 5.19e-01 -0.0556 0.0861 0.778 Mono L1
ENSG00000111144 LTA4H 520263 sc-eQTL 1.27e-01 0.148 0.0967 0.778 Mono L1
ENSG00000111145 ELK3 369408 sc-eQTL 5.45e-01 -0.0395 0.0653 0.778 Mono L1
ENSG00000139343 SNRPF 704855 sc-eQTL 9.54e-01 0.00359 0.0616 0.778 Mono L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.13e-02 -0.238 0.0931 0.778 Mono L1
ENSG00000257715 AC007298.1 538460 sc-eQTL 3.05e-01 0.0939 0.0914 0.778 Mono L1
ENSG00000059758 CDK17 163303 sc-eQTL 3.43e-01 0.0487 0.0513 0.777 NK L1
ENSG00000111144 LTA4H 520263 sc-eQTL 6.19e-01 -0.0435 0.0871 0.777 NK L1
ENSG00000111145 ELK3 369408 sc-eQTL 4.29e-01 -0.0654 0.0826 0.777 NK L1
ENSG00000139343 SNRPF 704855 sc-eQTL 8.90e-01 -0.00953 0.0686 0.777 NK L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.64e-01 -0.121 0.0864 0.777 NK L1
ENSG00000059758 CDK17 163303 sc-eQTL 4.85e-01 0.0305 0.0435 0.778 Other_T L1
ENSG00000074527 NTN4 772631 sc-eQTL 4.06e-01 -0.0669 0.0804 0.778 Other_T L1
ENSG00000111144 LTA4H 520263 sc-eQTL 9.65e-01 0.00399 0.0911 0.778 Other_T L1
ENSG00000111145 ELK3 369408 sc-eQTL 8.87e-01 -0.0101 0.0711 0.778 Other_T L1
ENSG00000139343 SNRPF 704855 sc-eQTL 8.83e-01 0.00973 0.066 0.778 Other_T L1
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.08e-01 -0.0832 0.1 0.778 Other_T L1
ENSG00000188596 CFAP54 74212 sc-eQTL 2.83e-01 0.112 0.104 0.778 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 163303 sc-eQTL 9.87e-01 0.00157 0.0975 0.77 B_Activated L2
ENSG00000111144 LTA4H 520263 sc-eQTL 3.04e-01 0.113 0.11 0.77 B_Activated L2
ENSG00000111145 ELK3 369408 sc-eQTL 3.00e-01 0.121 0.117 0.77 B_Activated L2
ENSG00000139343 SNRPF 704855 sc-eQTL 2.79e-01 0.119 0.11 0.77 B_Activated L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 5.76e-01 -0.0645 0.115 0.77 B_Activated L2
ENSG00000059758 CDK17 163303 sc-eQTL 5.67e-01 -0.0492 0.0859 0.777 B_Intermediate L2
ENSG00000111144 LTA4H 520263 sc-eQTL 8.86e-01 0.012 0.0832 0.777 B_Intermediate L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.77e-02 -0.165 0.0932 0.777 B_Intermediate L2
ENSG00000139343 SNRPF 704855 sc-eQTL 7.15e-01 -0.0341 0.0935 0.777 B_Intermediate L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 8.03e-01 -0.0273 0.11 0.777 B_Intermediate L2
ENSG00000059758 CDK17 163303 sc-eQTL 7.89e-01 -0.0224 0.0833 0.782 B_Memory L2
ENSG00000111144 LTA4H 520263 sc-eQTL 1.05e-01 -0.156 0.0956 0.782 B_Memory L2
ENSG00000111145 ELK3 369408 sc-eQTL 3.64e-01 0.0859 0.0944 0.782 B_Memory L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.76e-01 -0.0562 0.1 0.782 B_Memory L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.97e-02 0.217 0.11 0.782 B_Memory L2
ENSG00000059758 CDK17 163303 sc-eQTL 5.99e-02 -0.128 0.0676 0.778 B_Naive1 L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.54e-01 0.032 0.0713 0.778 B_Naive1 L2
ENSG00000111145 ELK3 369408 sc-eQTL 4.72e-01 -0.0608 0.0843 0.778 B_Naive1 L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.45e-01 0.0497 0.082 0.778 B_Naive1 L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 6.95e-01 0.0414 0.105 0.778 B_Naive1 L2
ENSG00000059758 CDK17 163303 sc-eQTL 9.70e-01 0.00323 0.0866 0.779 B_Naive2 L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.52e-01 0.0371 0.082 0.779 B_Naive2 L2
ENSG00000111145 ELK3 369408 sc-eQTL 4.67e-01 -0.0704 0.0966 0.779 B_Naive2 L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.85e-01 0.0525 0.0959 0.779 B_Naive2 L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.39e-02 -0.279 0.113 0.779 B_Naive2 L2
ENSG00000059758 CDK17 163303 sc-eQTL 4.62e-01 -0.0579 0.0785 0.78 CD4_CTL L2
ENSG00000111144 LTA4H 520263 sc-eQTL 3.09e-01 -0.113 0.111 0.78 CD4_CTL L2
ENSG00000111145 ELK3 369408 sc-eQTL 6.59e-01 0.0496 0.112 0.78 CD4_CTL L2
ENSG00000139343 SNRPF 704855 sc-eQTL 6.95e-01 -0.0384 0.0976 0.78 CD4_CTL L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 3.42e-02 -0.238 0.112 0.78 CD4_CTL L2
ENSG00000059758 CDK17 163303 sc-eQTL 6.26e-02 -0.0906 0.0484 0.778 CD4_Naive L2
ENSG00000111144 LTA4H 520263 sc-eQTL 4.95e-01 -0.0482 0.0705 0.778 CD4_Naive L2
ENSG00000111145 ELK3 369408 sc-eQTL 9.26e-01 -0.00656 0.0706 0.778 CD4_Naive L2
ENSG00000139343 SNRPF 704855 sc-eQTL 3.38e-01 -0.0601 0.0626 0.778 CD4_Naive L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 8.10e-01 0.0186 0.0772 0.778 CD4_Naive L2
ENSG00000059758 CDK17 163303 sc-eQTL 1.17e-01 -0.0747 0.0474 0.778 CD4_TCM L2
ENSG00000111144 LTA4H 520263 sc-eQTL 5.52e-01 -0.0482 0.0808 0.778 CD4_TCM L2
ENSG00000111145 ELK3 369408 sc-eQTL 1.08e-01 0.128 0.0791 0.778 CD4_TCM L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.42e-01 -0.0399 0.0652 0.778 CD4_TCM L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 2.29e-01 0.107 0.0889 0.778 CD4_TCM L2
ENSG00000059758 CDK17 163303 sc-eQTL 7.63e-01 0.0177 0.0588 0.778 CD4_TEM L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.95e-01 0.0356 0.0907 0.778 CD4_TEM L2
ENSG00000111145 ELK3 369408 sc-eQTL 8.89e-01 0.0117 0.0843 0.778 CD4_TEM L2
ENSG00000139343 SNRPF 704855 sc-eQTL 1.01e-01 -0.144 0.0877 0.778 CD4_TEM L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 7.71e-01 -0.0305 0.105 0.778 CD4_TEM L2
ENSG00000059758 CDK17 163303 sc-eQTL 9.26e-01 0.00531 0.0571 0.778 CD8_CTL L2
ENSG00000111144 LTA4H 520263 sc-eQTL 4.08e-01 0.0854 0.103 0.778 CD8_CTL L2
ENSG00000111145 ELK3 369408 sc-eQTL 1.05e-01 0.152 0.0932 0.778 CD8_CTL L2
ENSG00000139343 SNRPF 704855 sc-eQTL 4.07e-01 0.0716 0.0861 0.778 CD8_CTL L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 2.88e-01 -0.103 0.0965 0.778 CD8_CTL L2
ENSG00000059758 CDK17 163303 sc-eQTL 6.88e-02 -0.125 0.0686 0.778 CD8_Naive L2
ENSG00000111144 LTA4H 520263 sc-eQTL 8.48e-01 0.0159 0.0828 0.778 CD8_Naive L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.07e-01 -0.0329 0.0876 0.778 CD8_Naive L2
ENSG00000139343 SNRPF 704855 sc-eQTL 6.29e-01 0.038 0.0787 0.778 CD8_Naive L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 9.40e-02 0.157 0.0931 0.778 CD8_Naive L2
ENSG00000059758 CDK17 163303 sc-eQTL 6.37e-01 0.0345 0.073 0.773 CD8_TCM L2
ENSG00000111144 LTA4H 520263 sc-eQTL 1.04e-01 -0.174 0.107 0.773 CD8_TCM L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.60e-01 -0.0278 0.0909 0.773 CD8_TCM L2
ENSG00000139343 SNRPF 704855 sc-eQTL 6.75e-01 0.044 0.105 0.773 CD8_TCM L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 7.69e-01 0.0301 0.102 0.773 CD8_TCM L2
ENSG00000059758 CDK17 163303 sc-eQTL 2.59e-01 -0.105 0.0928 0.779 CD8_TEM L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.88e-01 0.0459 0.114 0.779 CD8_TEM L2
ENSG00000111145 ELK3 369408 sc-eQTL 5.83e-01 0.0616 0.112 0.779 CD8_TEM L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.04e-01 0.0697 0.104 0.779 CD8_TEM L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 8.95e-01 0.0149 0.113 0.779 CD8_TEM L2
ENSG00000059758 CDK17 163303 sc-eQTL 4.93e-01 -0.0425 0.0618 0.777 MAIT L2
ENSG00000074527 NTN4 772631 sc-eQTL 3.18e-01 -0.0833 0.0832 0.777 MAIT L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.88e-01 -0.0384 0.0956 0.777 MAIT L2
ENSG00000111145 ELK3 369408 sc-eQTL 5.78e-01 -0.0447 0.0802 0.777 MAIT L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.34e-01 -0.0579 0.0929 0.777 MAIT L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 5.82e-01 0.0575 0.104 0.777 MAIT L2
ENSG00000188596 CFAP54 74212 sc-eQTL 8.42e-01 -0.0207 0.103 0.777 MAIT L2
ENSG00000059758 CDK17 163303 sc-eQTL 9.82e-02 0.11 0.0663 0.776 NK_CD56bright L2
ENSG00000111144 LTA4H 520263 sc-eQTL 7.39e-01 0.0329 0.0987 0.776 NK_CD56bright L2
ENSG00000111145 ELK3 369408 sc-eQTL 3.82e-01 -0.0916 0.105 0.776 NK_CD56bright L2
ENSG00000139343 SNRPF 704855 sc-eQTL 3.97e-01 0.0929 0.109 0.776 NK_CD56bright L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 9.98e-01 -0.000288 0.111 0.776 NK_CD56bright L2
ENSG00000059758 CDK17 163303 sc-eQTL 8.34e-01 0.0116 0.0554 0.778 NK_CD56dim L2
ENSG00000111144 LTA4H 520263 sc-eQTL 7.38e-01 -0.0336 0.1 0.778 NK_CD56dim L2
ENSG00000111145 ELK3 369408 sc-eQTL 5.52e-01 -0.0528 0.0886 0.778 NK_CD56dim L2
ENSG00000139343 SNRPF 704855 sc-eQTL 7.09e-01 -0.0315 0.0843 0.778 NK_CD56dim L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 3.85e-02 -0.2 0.0962 0.778 NK_CD56dim L2
ENSG00000059758 CDK17 163303 sc-eQTL 6.64e-01 0.0385 0.0884 0.779 NK_HLA L2
ENSG00000111144 LTA4H 520263 sc-eQTL 9.65e-01 0.00515 0.116 0.779 NK_HLA L2
ENSG00000111145 ELK3 369408 sc-eQTL 8.50e-01 -0.0204 0.108 0.779 NK_HLA L2
ENSG00000139343 SNRPF 704855 sc-eQTL 9.04e-01 -0.0136 0.112 0.779 NK_HLA L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.08e-01 -0.0878 0.106 0.779 NK_HLA L2
ENSG00000059758 CDK17 163303 sc-eQTL 5.07e-01 0.0403 0.0606 0.778 NK_cytokine L2
ENSG00000111144 LTA4H 520263 sc-eQTL 5.52e-01 0.0611 0.102 0.778 NK_cytokine L2
ENSG00000111145 ELK3 369408 sc-eQTL 6.18e-01 -0.0489 0.0981 0.778 NK_cytokine L2
ENSG00000139343 SNRPF 704855 sc-eQTL 9.40e-01 0.00629 0.0832 0.778 NK_cytokine L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.19e-01 0.0831 0.103 0.778 NK_cytokine L2
ENSG00000059758 CDK17 163303 sc-eQTL 1.39e-01 -0.184 0.123 0.793 PB L2
ENSG00000111144 LTA4H 520263 sc-eQTL 8.94e-01 -0.0147 0.11 0.793 PB L2
ENSG00000111145 ELK3 369408 sc-eQTL 4.72e-01 -0.101 0.141 0.793 PB L2
ENSG00000139343 SNRPF 704855 sc-eQTL 6.33e-01 -0.0658 0.137 0.793 PB L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 9.85e-01 -0.00311 0.163 0.793 PB L2
ENSG00000059758 CDK17 163303 sc-eQTL 9.89e-01 0.000919 0.0676 0.776 Pro_T L2
ENSG00000074527 NTN4 772631 sc-eQTL 1.30e-01 -0.115 0.0755 0.776 Pro_T L2
ENSG00000111144 LTA4H 520263 sc-eQTL 4.47e-01 0.0678 0.0891 0.776 Pro_T L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.94e-01 0.0282 0.108 0.776 Pro_T L2
ENSG00000139343 SNRPF 704855 sc-eQTL 7.46e-01 0.0221 0.068 0.776 Pro_T L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 5.18e-01 0.0639 0.0988 0.776 Pro_T L2
ENSG00000188596 CFAP54 74212 sc-eQTL 6.61e-01 0.035 0.0799 0.776 Pro_T L2
ENSG00000059758 CDK17 163303 sc-eQTL 9.80e-01 0.0018 0.0735 0.778 Treg L2
ENSG00000111144 LTA4H 520263 sc-eQTL 6.12e-01 -0.0473 0.0931 0.778 Treg L2
ENSG00000111145 ELK3 369408 sc-eQTL 3.57e-01 -0.0778 0.0842 0.778 Treg L2
ENSG00000139343 SNRPF 704855 sc-eQTL 1.93e-01 0.127 0.0973 0.778 Treg L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.75e-01 0.148 0.109 0.778 Treg L2
ENSG00000059758 CDK17 163303 sc-eQTL 6.41e-01 -0.0426 0.0913 0.776 cDC L2
ENSG00000084110 HAL 567418 sc-eQTL 8.31e-01 0.0203 0.0949 0.776 cDC L2
ENSG00000111144 LTA4H 520263 sc-eQTL 3.38e-01 0.078 0.0812 0.776 cDC L2
ENSG00000111145 ELK3 369408 sc-eQTL 4.00e-01 -0.0905 0.107 0.776 cDC L2
ENSG00000139343 SNRPF 704855 sc-eQTL 6.00e-01 0.0473 0.0899 0.776 cDC L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 7.38e-01 -0.0367 0.11 0.776 cDC L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 6.01e-01 -0.0483 0.0923 0.776 cDC L2
ENSG00000059758 CDK17 163303 sc-eQTL 1.63e-01 -0.11 0.0786 0.778 cMono_IL1B L2
ENSG00000084110 HAL 567418 sc-eQTL 6.38e-01 -0.0406 0.0861 0.778 cMono_IL1B L2
ENSG00000111144 LTA4H 520263 sc-eQTL 7.83e-02 0.163 0.0924 0.778 cMono_IL1B L2
ENSG00000111145 ELK3 369408 sc-eQTL 2.05e-01 -0.0908 0.0714 0.778 cMono_IL1B L2
ENSG00000139343 SNRPF 704855 sc-eQTL 5.71e-01 -0.0419 0.0739 0.778 cMono_IL1B L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 5.13e-03 -0.283 0.1 0.778 cMono_IL1B L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 5.21e-01 0.0611 0.095 0.778 cMono_IL1B L2
ENSG00000059758 CDK17 163303 sc-eQTL 2.52e-01 -0.102 0.0893 0.778 cMono_S100A L2
ENSG00000084110 HAL 567418 sc-eQTL 6.13e-01 0.0509 0.1 0.778 cMono_S100A L2
ENSG00000111144 LTA4H 520263 sc-eQTL 2.58e-01 0.114 0.1 0.778 cMono_S100A L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.91e-01 0.0217 0.0817 0.778 cMono_S100A L2
ENSG00000139343 SNRPF 704855 sc-eQTL 9.12e-01 0.00889 0.0808 0.778 cMono_S100A L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.67e-01 -0.15 0.109 0.778 cMono_S100A L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 7.05e-01 0.0389 0.103 0.778 cMono_S100A L2
ENSG00000059758 CDK17 163303 sc-eQTL 4.41e-01 0.0684 0.0885 0.767 gdT L2
ENSG00000074527 NTN4 772631 sc-eQTL 9.90e-01 -0.00126 0.102 0.767 gdT L2
ENSG00000111144 LTA4H 520263 sc-eQTL 3.15e-01 0.133 0.132 0.767 gdT L2
ENSG00000111145 ELK3 369408 sc-eQTL 8.07e-01 0.03 0.123 0.767 gdT L2
ENSG00000139343 SNRPF 704855 sc-eQTL 9.45e-01 -0.00812 0.119 0.767 gdT L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.37e-01 0.102 0.131 0.767 gdT L2
ENSG00000188596 CFAP54 74212 sc-eQTL 3.73e-01 0.102 0.114 0.767 gdT L2
ENSG00000059758 CDK17 163303 sc-eQTL 1.80e-01 -0.133 0.099 0.773 intMono L2
ENSG00000084110 HAL 567418 sc-eQTL 5.59e-01 0.0588 0.1 0.773 intMono L2
ENSG00000111144 LTA4H 520263 sc-eQTL 3.96e-01 0.0876 0.103 0.773 intMono L2
ENSG00000111145 ELK3 369408 sc-eQTL 3.98e-01 0.0777 0.0917 0.773 intMono L2
ENSG00000139343 SNRPF 704855 sc-eQTL 8.62e-02 -0.168 0.0975 0.773 intMono L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 3.40e-01 -0.0973 0.102 0.773 intMono L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 6.21e-01 0.0507 0.103 0.773 intMono L2
ENSG00000059758 CDK17 163303 sc-eQTL 5.95e-01 0.0423 0.0794 0.769 ncMono L2
ENSG00000084110 HAL 567418 sc-eQTL 2.02e-01 -0.113 0.0883 0.769 ncMono L2
ENSG00000111144 LTA4H 520263 sc-eQTL 4.93e-01 0.0678 0.0988 0.769 ncMono L2
ENSG00000111145 ELK3 369408 sc-eQTL 7.71e-01 -0.0247 0.0849 0.769 ncMono L2
ENSG00000139343 SNRPF 704855 sc-eQTL 4.50e-01 0.0655 0.0866 0.769 ncMono L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 8.63e-01 -0.0159 0.0921 0.769 ncMono L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 9.43e-01 0.00758 0.105 0.769 ncMono L2
ENSG00000059758 CDK17 163303 sc-eQTL 5.19e-02 -0.204 0.104 0.777 pDC L2
ENSG00000084110 HAL 567418 sc-eQTL 7.72e-01 0.0257 0.0888 0.777 pDC L2
ENSG00000111144 LTA4H 520263 sc-eQTL 2.24e-01 0.121 0.099 0.777 pDC L2
ENSG00000111145 ELK3 369408 sc-eQTL 4.82e-01 -0.0855 0.121 0.777 pDC L2
ENSG00000139343 SNRPF 704855 sc-eQTL 9.17e-01 -0.0111 0.106 0.777 pDC L2
ENSG00000139350 NEDD1 -343440 sc-eQTL 4.19e-01 -0.0947 0.117 0.777 pDC L2
ENSG00000257715 AC007298.1 538460 sc-eQTL 6.85e-01 0.0408 0.1 0.777 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 163303 sc-eQTL 4.41e-01 -0.0549 0.0711 0.778 B_Memory LOneK1K
ENSG00000111144 LTA4H 520263 sc-eQTL 9.27e-01 -0.00679 0.0739 0.778 B_Memory LOneK1K
ENSG00000111145 ELK3 369408 sc-eQTL 9.29e-01 -0.00754 0.0845 0.778 B_Memory LOneK1K
ENSG00000139343 SNRPF 704855 sc-eQTL 2.86e-01 -0.0873 0.0816 0.778 B_Memory LOneK1K
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.37e-01 0.159 0.107 0.778 B_Memory LOneK1K
ENSG00000059758 CDK17 163303 sc-eQTL 1.34e-01 -0.0915 0.0608 0.778 B_Naive LOneK1K
ENSG00000111144 LTA4H 520263 sc-eQTL 2.88e-01 0.0729 0.0684 0.778 B_Naive LOneK1K
ENSG00000111145 ELK3 369408 sc-eQTL 1.86e-01 -0.103 0.0778 0.778 B_Naive LOneK1K
ENSG00000139343 SNRPF 704855 sc-eQTL 6.30e-01 0.038 0.0786 0.778 B_Naive LOneK1K
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.79e-01 -0.14 0.104 0.778 B_Naive LOneK1K
ENSG00000059758 CDK17 163303 sc-eQTL 7.85e-02 -0.125 0.0708 0.778 CD14_Mono LOneK1K
ENSG00000084110 HAL 567418 sc-eQTL 6.71e-01 -0.0368 0.0864 0.778 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 520263 sc-eQTL 1.07e-01 0.153 0.0943 0.778 CD14_Mono LOneK1K
ENSG00000111145 ELK3 369408 sc-eQTL 6.35e-01 -0.0325 0.0685 0.778 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 704855 sc-eQTL 9.88e-01 0.00102 0.0661 0.778 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -343440 sc-eQTL 1.24e-02 -0.258 0.102 0.778 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 538460 sc-eQTL 3.15e-01 0.0966 0.0959 0.778 CD14_Mono LOneK1K
ENSG00000059758 CDK17 163303 sc-eQTL 6.08e-01 -0.0376 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000084110 HAL 567418 sc-eQTL 4.75e-01 -0.062 0.0866 0.776 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 520263 sc-eQTL 4.06e-01 0.0799 0.096 0.776 CD16_Mono LOneK1K
ENSG00000111145 ELK3 369408 sc-eQTL 8.10e-01 -0.0171 0.0711 0.776 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 704855 sc-eQTL 4.76e-01 -0.0523 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -343440 sc-eQTL 3.00e-01 -0.0976 0.0938 0.776 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 538460 sc-eQTL 8.97e-01 0.0129 0.0996 0.776 CD16_Mono LOneK1K
ENSG00000059758 CDK17 163303 sc-eQTL 8.37e-01 0.0108 0.0521 0.778 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 520263 sc-eQTL 6.04e-01 -0.047 0.0905 0.778 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 369408 sc-eQTL 3.65e-01 -0.0752 0.0827 0.778 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 704855 sc-eQTL 5.56e-01 -0.0418 0.0708 0.778 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -343440 sc-eQTL 2.23e-01 -0.108 0.0881 0.778 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -343440 eQTL 4.32e-21 -0.256 0.0265 0.0 0.0 0.228
ENSG00000188596 CFAP54 74208 eQTL 2e-07 -0.12 0.0228 0.00772 0.00739 0.228

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -343440 1.2e-06 9e-07 2.62e-07 3.77e-07 1.18e-07 4.39e-07 8.36e-07 2.71e-07 8.29e-07 2.67e-07 1.1e-06 5.69e-07 1.3e-06 2.05e-07 4.21e-07 4.79e-07 7.39e-07 5.2e-07 4e-07 3.54e-07 2.82e-07 6.48e-07 5.67e-07 4.22e-07 1.69e-06 2.7e-07 5.76e-07 4.59e-07 8e-07 9.22e-07 4.61e-07 4.25e-08 1.31e-07 3.58e-07 3.21e-07 2.54e-07 3.14e-07 1.56e-07 1.13e-07 9.61e-09 1.21e-07 9.5e-07 7.53e-08 4.16e-08 1.93e-07 4.57e-08 1.9e-07 8.74e-08 6.58e-08
ENSG00000188596 CFAP54 74208 6.93e-06 7.87e-06 1.04e-06 3.75e-06 1.85e-06 3.93e-06 9.3e-06 1.25e-06 4.91e-06 3.8e-06 9.1e-06 3.63e-06 1.06e-05 3.41e-06 1.63e-06 4.63e-06 3.72e-06 3.89e-06 2.15e-06 2e-06 3.41e-06 7.4e-06 5.31e-06 2.15e-06 1.05e-05 2.58e-06 3.58e-06 2.34e-06 7.13e-06 7.75e-06 3.67e-06 5.11e-07 6.76e-07 2.84e-06 2.59e-06 1.63e-06 1.35e-06 1.06e-06 1.3e-06 8.68e-07 8.43e-07 8.26e-06 1.02e-06 1.44e-07 6.85e-07 8.05e-07 9.08e-07 7.13e-07 5.87e-07