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Genes within 1Mb (chr12:96561233:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 160753 sc-eQTL 1.13e-01 0.0747 0.0469 0.536 B L1
ENSG00000111144 LTA4H 517713 sc-eQTL 4.41e-01 0.0452 0.0586 0.536 B L1
ENSG00000111145 ELK3 366858 sc-eQTL 5.95e-01 0.0332 0.0624 0.536 B L1
ENSG00000139343 SNRPF 702305 sc-eQTL 5.69e-01 0.0324 0.0567 0.536 B L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.79e-01 -0.0895 0.0826 0.536 B L1
ENSG00000059758 CDK17 160753 sc-eQTL 5.40e-01 -0.0233 0.0379 0.536 CD4T L1
ENSG00000111144 LTA4H 517713 sc-eQTL 8.79e-01 0.00795 0.0521 0.536 CD4T L1
ENSG00000111145 ELK3 366858 sc-eQTL 4.88e-01 -0.0392 0.0564 0.536 CD4T L1
ENSG00000139343 SNRPF 702305 sc-eQTL 9.25e-01 -0.00465 0.0494 0.536 CD4T L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 7.29e-01 -0.0211 0.0608 0.536 CD4T L1
ENSG00000059758 CDK17 160753 sc-eQTL 7.28e-01 -0.0135 0.0389 0.536 CD8T L1
ENSG00000111144 LTA4H 517713 sc-eQTL 5.35e-01 -0.0259 0.0418 0.536 CD8T L1
ENSG00000111145 ELK3 366858 sc-eQTL 4.07e-01 -0.0521 0.0628 0.536 CD8T L1
ENSG00000139343 SNRPF 702305 sc-eQTL 4.92e-01 0.0354 0.0515 0.536 CD8T L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 5.41e-01 -0.0419 0.0685 0.536 CD8T L1
ENSG00000059758 CDK17 160753 sc-eQTL 7.28e-01 -0.026 0.0746 0.527 DC L1
ENSG00000084110 HAL 564868 sc-eQTL 5.08e-01 -0.0563 0.0848 0.527 DC L1
ENSG00000111144 LTA4H 517713 sc-eQTL 7.28e-02 0.124 0.0689 0.527 DC L1
ENSG00000111145 ELK3 366858 sc-eQTL 7.13e-01 -0.0313 0.085 0.527 DC L1
ENSG00000139343 SNRPF 702305 sc-eQTL 9.06e-01 0.00833 0.0707 0.527 DC L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.84e-01 -0.0973 0.0905 0.527 DC L1
ENSG00000257715 AC007298.1 535910 sc-eQTL 5.99e-01 -0.0431 0.0819 0.527 DC L1
ENSG00000059758 CDK17 160753 sc-eQTL 7.08e-01 -0.022 0.0586 0.536 Mono L1
ENSG00000084110 HAL 564868 sc-eQTL 7.80e-01 -0.0207 0.0739 0.536 Mono L1
ENSG00000111144 LTA4H 517713 sc-eQTL 5.33e-01 0.0521 0.0834 0.536 Mono L1
ENSG00000111145 ELK3 366858 sc-eQTL 9.45e-01 -0.0039 0.056 0.536 Mono L1
ENSG00000139343 SNRPF 702305 sc-eQTL 2.13e-01 -0.0657 0.0526 0.536 Mono L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 9.48e-01 -0.00525 0.0811 0.536 Mono L1
ENSG00000257715 AC007298.1 535910 sc-eQTL 5.55e-01 0.0465 0.0786 0.536 Mono L1
ENSG00000059758 CDK17 160753 sc-eQTL 1.26e-01 0.0672 0.0437 0.536 NK L1
ENSG00000111144 LTA4H 517713 sc-eQTL 8.96e-01 -0.00977 0.0746 0.536 NK L1
ENSG00000111145 ELK3 366858 sc-eQTL 3.40e-01 0.0676 0.0706 0.536 NK L1
ENSG00000139343 SNRPF 702305 sc-eQTL 5.09e-01 0.0388 0.0586 0.536 NK L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 8.39e-01 0.0151 0.0743 0.536 NK L1
ENSG00000059758 CDK17 160753 sc-eQTL 6.01e-02 0.0699 0.037 0.536 Other_T L1
ENSG00000074527 NTN4 770081 sc-eQTL 5.41e-02 -0.132 0.0683 0.536 Other_T L1
ENSG00000111144 LTA4H 517713 sc-eQTL 5.24e-01 -0.0496 0.0778 0.536 Other_T L1
ENSG00000111145 ELK3 366858 sc-eQTL 2.35e-01 -0.0722 0.0606 0.536 Other_T L1
ENSG00000139343 SNRPF 702305 sc-eQTL 8.62e-01 -0.0098 0.0565 0.536 Other_T L1
ENSG00000139350 NEDD1 -345990 sc-eQTL 1.89e-01 -0.113 0.0857 0.536 Other_T L1
ENSG00000188596 CFAP54 71662 sc-eQTL 6.69e-01 0.0381 0.0891 0.536 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 160753 sc-eQTL 4.15e-01 0.0706 0.0863 0.526 B_Activated L2
ENSG00000111144 LTA4H 517713 sc-eQTL 5.01e-02 0.191 0.0969 0.526 B_Activated L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.46e-01 0.12 0.103 0.526 B_Activated L2
ENSG00000139343 SNRPF 702305 sc-eQTL 5.15e-01 0.0637 0.0977 0.526 B_Activated L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 3.01e-01 -0.106 0.102 0.526 B_Activated L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.60e-02 0.124 0.0717 0.534 B_Intermediate L2
ENSG00000111144 LTA4H 517713 sc-eQTL 3.39e-01 0.0669 0.0698 0.534 B_Intermediate L2
ENSG00000111145 ELK3 366858 sc-eQTL 1.20e-01 -0.122 0.0784 0.534 B_Intermediate L2
ENSG00000139343 SNRPF 702305 sc-eQTL 5.25e-01 -0.05 0.0785 0.534 B_Intermediate L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 1.64e-01 0.128 0.0916 0.534 B_Intermediate L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.57e-01 0.0127 0.0707 0.539 B_Memory L2
ENSG00000111144 LTA4H 517713 sc-eQTL 5.92e-01 0.0437 0.0816 0.539 B_Memory L2
ENSG00000111145 ELK3 366858 sc-eQTL 8.58e-02 0.138 0.0797 0.539 B_Memory L2
ENSG00000139343 SNRPF 702305 sc-eQTL 1.45e-01 -0.124 0.0846 0.539 B_Memory L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.46e-01 0.109 0.0938 0.539 B_Memory L2
ENSG00000059758 CDK17 160753 sc-eQTL 5.22e-01 0.0373 0.0581 0.536 B_Naive1 L2
ENSG00000111144 LTA4H 517713 sc-eQTL 7.99e-01 -0.0155 0.0609 0.536 B_Naive1 L2
ENSG00000111145 ELK3 366858 sc-eQTL 1.74e-01 0.0978 0.0717 0.536 B_Naive1 L2
ENSG00000139343 SNRPF 702305 sc-eQTL 7.39e-02 0.125 0.0696 0.536 B_Naive1 L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 5.20e-01 0.0579 0.0898 0.536 B_Naive1 L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.65e-02 0.128 0.0743 0.536 B_Naive2 L2
ENSG00000111144 LTA4H 517713 sc-eQTL 4.97e-01 0.0482 0.0709 0.536 B_Naive2 L2
ENSG00000111145 ELK3 366858 sc-eQTL 6.70e-01 0.0357 0.0836 0.536 B_Naive2 L2
ENSG00000139343 SNRPF 702305 sc-eQTL 1.72e-01 0.113 0.0827 0.536 B_Naive2 L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.42e-02 -0.222 0.0976 0.536 B_Naive2 L2
ENSG00000059758 CDK17 160753 sc-eQTL 4.22e-01 0.0548 0.068 0.539 CD4_CTL L2
ENSG00000111144 LTA4H 517713 sc-eQTL 1.53e-01 -0.137 0.0956 0.539 CD4_CTL L2
ENSG00000111145 ELK3 366858 sc-eQTL 5.56e-01 -0.0574 0.0972 0.539 CD4_CTL L2
ENSG00000139343 SNRPF 702305 sc-eQTL 9.37e-01 0.00667 0.0846 0.539 CD4_CTL L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.85e-01 -0.0684 0.0977 0.539 CD4_CTL L2
ENSG00000059758 CDK17 160753 sc-eQTL 4.21e-01 -0.0335 0.0415 0.536 CD4_Naive L2
ENSG00000111144 LTA4H 517713 sc-eQTL 8.79e-01 -0.0092 0.0601 0.536 CD4_Naive L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.21e-01 -0.0735 0.0599 0.536 CD4_Naive L2
ENSG00000139343 SNRPF 702305 sc-eQTL 7.58e-01 -0.0165 0.0534 0.536 CD4_Naive L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 3.62e-01 -0.06 0.0657 0.536 CD4_Naive L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.94e-01 -0.00545 0.0408 0.536 CD4_TCM L2
ENSG00000111144 LTA4H 517713 sc-eQTL 9.97e-01 -0.00025 0.0692 0.536 CD4_TCM L2
ENSG00000111145 ELK3 366858 sc-eQTL 7.46e-01 -0.0221 0.0681 0.536 CD4_TCM L2
ENSG00000139343 SNRPF 702305 sc-eQTL 5.52e-01 0.0333 0.0558 0.536 CD4_TCM L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.24e-01 0.0927 0.076 0.536 CD4_TCM L2
ENSG00000059758 CDK17 160753 sc-eQTL 1.40e-02 0.122 0.0493 0.536 CD4_TEM L2
ENSG00000111144 LTA4H 517713 sc-eQTL 8.39e-01 0.0157 0.0772 0.536 CD4_TEM L2
ENSG00000111145 ELK3 366858 sc-eQTL 8.20e-01 0.0164 0.0718 0.536 CD4_TEM L2
ENSG00000139343 SNRPF 702305 sc-eQTL 1.88e-01 -0.0988 0.0749 0.536 CD4_TEM L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 6.51e-01 -0.0403 0.0891 0.536 CD4_TEM L2
ENSG00000059758 CDK17 160753 sc-eQTL 6.85e-02 0.0886 0.0484 0.536 CD8_CTL L2
ENSG00000111144 LTA4H 517713 sc-eQTL 4.41e-01 0.0678 0.0879 0.536 CD8_CTL L2
ENSG00000111145 ELK3 366858 sc-eQTL 5.05e-01 0.0535 0.0801 0.536 CD8_CTL L2
ENSG00000139343 SNRPF 702305 sc-eQTL 8.02e-01 -0.0185 0.0737 0.536 CD8_CTL L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 8.24e-01 -0.0184 0.0826 0.536 CD8_CTL L2
ENSG00000059758 CDK17 160753 sc-eQTL 2.90e-01 -0.0619 0.0583 0.536 CD8_Naive L2
ENSG00000111144 LTA4H 517713 sc-eQTL 7.82e-01 -0.0194 0.07 0.536 CD8_Naive L2
ENSG00000111145 ELK3 366858 sc-eQTL 7.31e-01 -0.0255 0.074 0.536 CD8_Naive L2
ENSG00000139343 SNRPF 702305 sc-eQTL 8.97e-01 0.00861 0.0666 0.536 CD8_Naive L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 6.80e-01 -0.0327 0.0792 0.536 CD8_Naive L2
ENSG00000059758 CDK17 160753 sc-eQTL 1.93e-01 0.0828 0.0634 0.53 CD8_TCM L2
ENSG00000111144 LTA4H 517713 sc-eQTL 9.36e-01 -0.00749 0.0935 0.53 CD8_TCM L2
ENSG00000111145 ELK3 366858 sc-eQTL 8.76e-01 -0.0124 0.0792 0.53 CD8_TCM L2
ENSG00000139343 SNRPF 702305 sc-eQTL 1.52e-01 0.13 0.0907 0.53 CD8_TCM L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 2.68e-01 -0.0989 0.089 0.53 CD8_TCM L2
ENSG00000059758 CDK17 160753 sc-eQTL 4.47e-01 0.0613 0.0805 0.53 CD8_TEM L2
ENSG00000111144 LTA4H 517713 sc-eQTL 5.93e-01 -0.0528 0.0986 0.53 CD8_TEM L2
ENSG00000111145 ELK3 366858 sc-eQTL 6.77e-01 -0.0404 0.097 0.53 CD8_TEM L2
ENSG00000139343 SNRPF 702305 sc-eQTL 8.92e-01 0.0123 0.0902 0.53 CD8_TEM L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.61e-01 -0.0722 0.0977 0.53 CD8_TEM L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.38e-01 -0.0109 0.0533 0.535 MAIT L2
ENSG00000074527 NTN4 770081 sc-eQTL 1.52e-01 -0.103 0.0715 0.535 MAIT L2
ENSG00000111144 LTA4H 517713 sc-eQTL 2.89e-01 -0.0874 0.0822 0.535 MAIT L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.29e-01 -0.0831 0.0689 0.535 MAIT L2
ENSG00000139343 SNRPF 702305 sc-eQTL 7.09e-02 -0.144 0.0795 0.535 MAIT L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.40e-01 -0.0695 0.0898 0.535 MAIT L2
ENSG00000188596 CFAP54 71662 sc-eQTL 9.93e-01 -0.000782 0.0892 0.535 MAIT L2
ENSG00000059758 CDK17 160753 sc-eQTL 1.30e-03 0.179 0.0548 0.533 NK_CD56bright L2
ENSG00000111144 LTA4H 517713 sc-eQTL 8.23e-01 -0.0186 0.0832 0.533 NK_CD56bright L2
ENSG00000111145 ELK3 366858 sc-eQTL 6.31e-01 -0.0424 0.0882 0.533 NK_CD56bright L2
ENSG00000139343 SNRPF 702305 sc-eQTL 2.56e-01 0.105 0.092 0.533 NK_CD56bright L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 3.41e-01 0.0887 0.0929 0.533 NK_CD56bright L2
ENSG00000059758 CDK17 160753 sc-eQTL 2.65e-01 0.0535 0.0478 0.539 NK_CD56dim L2
ENSG00000111144 LTA4H 517713 sc-eQTL 6.74e-01 0.0365 0.0866 0.539 NK_CD56dim L2
ENSG00000111145 ELK3 366858 sc-eQTL 4.21e-01 0.0618 0.0766 0.539 NK_CD56dim L2
ENSG00000139343 SNRPF 702305 sc-eQTL 9.45e-02 -0.122 0.0725 0.539 NK_CD56dim L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 7.64e-01 -0.0252 0.084 0.539 NK_CD56dim L2
ENSG00000059758 CDK17 160753 sc-eQTL 6.69e-01 -0.0326 0.0763 0.541 NK_HLA L2
ENSG00000111144 LTA4H 517713 sc-eQTL 4.37e-01 -0.0778 0.0999 0.541 NK_HLA L2
ENSG00000111145 ELK3 366858 sc-eQTL 6.66e-01 -0.0401 0.0928 0.541 NK_HLA L2
ENSG00000139343 SNRPF 702305 sc-eQTL 8.08e-02 0.168 0.096 0.541 NK_HLA L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.38e-01 0.0711 0.0914 0.541 NK_HLA L2
ENSG00000059758 CDK17 160753 sc-eQTL 7.09e-01 0.0197 0.0526 0.539 NK_cytokine L2
ENSG00000111144 LTA4H 517713 sc-eQTL 7.64e-01 -0.0267 0.0889 0.539 NK_cytokine L2
ENSG00000111145 ELK3 366858 sc-eQTL 7.99e-01 0.0217 0.0851 0.539 NK_cytokine L2
ENSG00000139343 SNRPF 702305 sc-eQTL 4.38e-01 0.056 0.072 0.539 NK_cytokine L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 3.43e-01 0.0845 0.0889 0.539 NK_cytokine L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.57e-01 0.0179 0.0991 0.537 PB L2
ENSG00000111144 LTA4H 517713 sc-eQTL 9.74e-01 0.00286 0.0874 0.537 PB L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.10e-01 0.14 0.111 0.537 PB L2
ENSG00000139343 SNRPF 702305 sc-eQTL 3.74e-01 -0.0972 0.109 0.537 PB L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 1.97e-01 -0.167 0.129 0.537 PB L2
ENSG00000059758 CDK17 160753 sc-eQTL 8.66e-01 0.00985 0.0584 0.533 Pro_T L2
ENSG00000074527 NTN4 770081 sc-eQTL 2.91e-01 -0.0693 0.0655 0.533 Pro_T L2
ENSG00000111144 LTA4H 517713 sc-eQTL 2.08e-01 0.0971 0.0769 0.533 Pro_T L2
ENSG00000111145 ELK3 366858 sc-eQTL 5.05e-01 -0.0623 0.0933 0.533 Pro_T L2
ENSG00000139343 SNRPF 702305 sc-eQTL 8.41e-01 -0.0118 0.0589 0.533 Pro_T L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 5.30e-01 0.0537 0.0854 0.533 Pro_T L2
ENSG00000188596 CFAP54 71662 sc-eQTL 4.66e-01 0.0505 0.0691 0.533 Pro_T L2
ENSG00000059758 CDK17 160753 sc-eQTL 6.98e-01 -0.0246 0.0634 0.536 Treg L2
ENSG00000111144 LTA4H 517713 sc-eQTL 5.26e-01 0.051 0.0802 0.536 Treg L2
ENSG00000111145 ELK3 366858 sc-eQTL 5.48e-01 -0.0438 0.0727 0.536 Treg L2
ENSG00000139343 SNRPF 702305 sc-eQTL 1.38e-01 0.125 0.0838 0.536 Treg L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 9.27e-01 0.00861 0.094 0.536 Treg L2
ENSG00000059758 CDK17 160753 sc-eQTL 4.33e-01 0.063 0.0802 0.527 cDC L2
ENSG00000084110 HAL 564868 sc-eQTL 9.09e-01 -0.00956 0.0835 0.527 cDC L2
ENSG00000111144 LTA4H 517713 sc-eQTL 3.35e-02 0.151 0.0707 0.527 cDC L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.08e-01 -0.119 0.094 0.527 cDC L2
ENSG00000139343 SNRPF 702305 sc-eQTL 4.35e-01 0.0617 0.0789 0.527 cDC L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 8.59e-01 0.0171 0.0963 0.527 cDC L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 7.13e-01 -0.0299 0.0812 0.527 cDC L2
ENSG00000059758 CDK17 160753 sc-eQTL 2.23e-01 -0.0831 0.068 0.536 cMono_IL1B L2
ENSG00000084110 HAL 564868 sc-eQTL 2.47e-01 -0.0862 0.0742 0.536 cMono_IL1B L2
ENSG00000111144 LTA4H 517713 sc-eQTL 2.76e-01 0.0876 0.0802 0.536 cMono_IL1B L2
ENSG00000111145 ELK3 366858 sc-eQTL 1.32e-01 -0.0931 0.0616 0.536 cMono_IL1B L2
ENSG00000139343 SNRPF 702305 sc-eQTL 4.55e-01 -0.0478 0.0638 0.536 cMono_IL1B L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.47e-01 -0.0669 0.0879 0.536 cMono_IL1B L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 4.52e-01 0.0619 0.082 0.536 cMono_IL1B L2
ENSG00000059758 CDK17 160753 sc-eQTL 4.41e-01 -0.0595 0.0771 0.536 cMono_S100A L2
ENSG00000084110 HAL 564868 sc-eQTL 1.44e-01 0.126 0.0862 0.536 cMono_S100A L2
ENSG00000111144 LTA4H 517713 sc-eQTL 8.00e-01 0.0219 0.0865 0.536 cMono_S100A L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.48e-01 0.0813 0.0703 0.536 cMono_S100A L2
ENSG00000139343 SNRPF 702305 sc-eQTL 6.72e-01 -0.0296 0.0696 0.536 cMono_S100A L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 9.37e-01 0.00745 0.094 0.536 cMono_S100A L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 6.87e-01 0.0358 0.0885 0.536 cMono_S100A L2
ENSG00000059758 CDK17 160753 sc-eQTL 1.70e-01 0.108 0.0779 0.524 gdT L2
ENSG00000074527 NTN4 770081 sc-eQTL 8.29e-01 -0.0195 0.09 0.524 gdT L2
ENSG00000111144 LTA4H 517713 sc-eQTL 3.49e-01 -0.11 0.117 0.524 gdT L2
ENSG00000111145 ELK3 366858 sc-eQTL 9.85e-01 -0.00208 0.109 0.524 gdT L2
ENSG00000139343 SNRPF 702305 sc-eQTL 9.72e-02 0.173 0.104 0.524 gdT L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 7.02e-01 -0.0443 0.116 0.524 gdT L2
ENSG00000188596 CFAP54 71662 sc-eQTL 2.71e-01 0.112 0.101 0.524 gdT L2
ENSG00000059758 CDK17 160753 sc-eQTL 1.77e-01 -0.118 0.0871 0.527 intMono L2
ENSG00000084110 HAL 564868 sc-eQTL 8.37e-01 -0.0182 0.0884 0.527 intMono L2
ENSG00000111144 LTA4H 517713 sc-eQTL 6.93e-01 0.0358 0.0907 0.527 intMono L2
ENSG00000111145 ELK3 366858 sc-eQTL 5.21e-01 0.0518 0.0807 0.527 intMono L2
ENSG00000139343 SNRPF 702305 sc-eQTL 5.79e-01 -0.048 0.0863 0.527 intMono L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 7.78e-01 -0.0253 0.0897 0.527 intMono L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 1.33e-01 0.135 0.0897 0.527 intMono L2
ENSG00000059758 CDK17 160753 sc-eQTL 7.38e-01 -0.0236 0.0706 0.52 ncMono L2
ENSG00000084110 HAL 564868 sc-eQTL 2.39e-01 -0.0929 0.0786 0.52 ncMono L2
ENSG00000111144 LTA4H 517713 sc-eQTL 9.85e-01 0.00162 0.0879 0.52 ncMono L2
ENSG00000111145 ELK3 366858 sc-eQTL 2.59e-01 0.0851 0.0753 0.52 ncMono L2
ENSG00000139343 SNRPF 702305 sc-eQTL 7.65e-02 -0.136 0.0765 0.52 ncMono L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 1.51e-01 0.118 0.0815 0.52 ncMono L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 2.96e-01 -0.0977 0.0932 0.52 ncMono L2
ENSG00000059758 CDK17 160753 sc-eQTL 2.38e-01 -0.109 0.0922 0.534 pDC L2
ENSG00000084110 HAL 564868 sc-eQTL 7.66e-01 0.0234 0.0782 0.534 pDC L2
ENSG00000111144 LTA4H 517713 sc-eQTL 1.42e-02 0.213 0.0858 0.534 pDC L2
ENSG00000111145 ELK3 366858 sc-eQTL 7.64e-01 0.0322 0.107 0.534 pDC L2
ENSG00000139343 SNRPF 702305 sc-eQTL 6.53e-01 0.0421 0.0934 0.534 pDC L2
ENSG00000139350 NEDD1 -345990 sc-eQTL 4.03e-01 -0.0863 0.103 0.534 pDC L2
ENSG00000257715 AC007298.1 535910 sc-eQTL 8.20e-01 0.0201 0.0884 0.534 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 160753 sc-eQTL 1.13e-01 0.0971 0.061 0.536 B_Memory LOneK1K
ENSG00000111144 LTA4H 517713 sc-eQTL 3.11e-01 0.0645 0.0635 0.536 B_Memory LOneK1K
ENSG00000111145 ELK3 366858 sc-eQTL 9.81e-01 -0.00176 0.0728 0.536 B_Memory LOneK1K
ENSG00000139343 SNRPF 702305 sc-eQTL 3.17e-01 -0.0706 0.0704 0.536 B_Memory LOneK1K
ENSG00000139350 NEDD1 -345990 sc-eQTL 1.23e-01 0.142 0.092 0.536 B_Memory LOneK1K
ENSG00000059758 CDK17 160753 sc-eQTL 2.57e-01 0.0592 0.0521 0.536 B_Naive LOneK1K
ENSG00000111144 LTA4H 517713 sc-eQTL 7.13e-01 0.0216 0.0587 0.536 B_Naive LOneK1K
ENSG00000111145 ELK3 366858 sc-eQTL 4.65e-01 0.0488 0.0667 0.536 B_Naive LOneK1K
ENSG00000139343 SNRPF 702305 sc-eQTL 1.09e-01 0.108 0.0669 0.536 B_Naive LOneK1K
ENSG00000139350 NEDD1 -345990 sc-eQTL 3.18e-01 -0.0888 0.0888 0.536 B_Naive LOneK1K
ENSG00000059758 CDK17 160753 sc-eQTL 1.96e-01 -0.0796 0.0613 0.536 CD14_Mono LOneK1K
ENSG00000084110 HAL 564868 sc-eQTL 9.28e-01 -0.00675 0.0745 0.536 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 517713 sc-eQTL 3.63e-01 0.0745 0.0817 0.536 CD14_Mono LOneK1K
ENSG00000111145 ELK3 366858 sc-eQTL 8.06e-01 -0.0145 0.0591 0.536 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 702305 sc-eQTL 3.67e-01 -0.0515 0.0569 0.536 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -345990 sc-eQTL 5.45e-01 -0.0543 0.0894 0.536 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 535910 sc-eQTL 4.04e-01 0.0692 0.0828 0.536 CD14_Mono LOneK1K
ENSG00000059758 CDK17 160753 sc-eQTL 2.08e-01 -0.08 0.0634 0.534 CD16_Mono LOneK1K
ENSG00000084110 HAL 564868 sc-eQTL 3.63e-01 -0.0684 0.0751 0.534 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 517713 sc-eQTL 9.15e-01 0.00896 0.0834 0.534 CD16_Mono LOneK1K
ENSG00000111145 ELK3 366858 sc-eQTL 7.42e-01 0.0204 0.0617 0.534 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 702305 sc-eQTL 2.22e-01 -0.0778 0.0634 0.534 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -345990 sc-eQTL 7.33e-01 0.0279 0.0816 0.534 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 535910 sc-eQTL 7.76e-01 -0.0246 0.0864 0.534 CD16_Mono LOneK1K
ENSG00000059758 CDK17 160753 sc-eQTL 5.22e-01 0.0287 0.0448 0.539 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 517713 sc-eQTL 8.66e-01 -0.0131 0.078 0.539 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 366858 sc-eQTL 3.86e-01 0.0619 0.0712 0.539 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 702305 sc-eQTL 8.09e-01 -0.0148 0.061 0.539 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -345990 sc-eQTL 8.65e-01 0.0129 0.0761 0.539 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139343 SNRPF 702305 eQTL 0.02 0.021 0.00902 0.00137 0.0 0.456
ENSG00000139350 NEDD1 -345990 eQTL 0.0206 -0.056 0.0242 0.0 0.0 0.456
ENSG00000188596 CFAP54 71658 eQTL 0.00629 -0.0551 0.0201 0.0 0.0 0.456

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188596 CFAP54 71658 5.68e-06 7.76e-06 6.42e-07 3.69e-06 1.61e-06 2.71e-06 8.61e-06 1.22e-06 4.65e-06 3.16e-06 8.18e-06 3.14e-06 1.02e-05 2.9e-06 9.47e-07 3.99e-06 3e-06 3.84e-06 1.63e-06 1.61e-06 2.61e-06 6.14e-06 4.86e-06 1.97e-06 9.63e-06 2.16e-06 2.88e-06 1.83e-06 6.2e-06 6.57e-06 3.32e-06 4.31e-07 7.38e-07 2.5e-06 2.56e-06 1.16e-06 1.08e-06 5.57e-07 9.13e-07 7.28e-07 7.35e-07 7.76e-06 6.31e-07 1.7e-07 7.84e-07 9.91e-07 1.07e-06 7.43e-07 5.13e-07