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Genes within 1Mb (chr12:96548916:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 148436 sc-eQTL 7.63e-01 0.0146 0.0484 0.611 B L1
ENSG00000111144 LTA4H 505396 sc-eQTL 5.57e-01 0.0353 0.0601 0.611 B L1
ENSG00000111145 ELK3 354541 sc-eQTL 8.09e-01 0.0155 0.064 0.611 B L1
ENSG00000136014 USP44 997440 sc-eQTL 4.63e-02 -0.157 0.0782 0.611 B L1
ENSG00000139343 SNRPF 689988 sc-eQTL 9.76e-01 -0.00172 0.0581 0.611 B L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 5.57e-01 -0.0499 0.0848 0.611 B L1
ENSG00000059758 CDK17 148436 sc-eQTL 7.46e-02 -0.069 0.0385 0.611 CD4T L1
ENSG00000111144 LTA4H 505396 sc-eQTL 5.13e-01 0.0349 0.0533 0.611 CD4T L1
ENSG00000111145 ELK3 354541 sc-eQTL 9.13e-01 0.00631 0.0578 0.611 CD4T L1
ENSG00000136014 USP44 997440 sc-eQTL 1.84e-01 0.109 0.082 0.611 CD4T L1
ENSG00000139343 SNRPF 689988 sc-eQTL 6.86e-01 -0.0204 0.0505 0.611 CD4T L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.43e-01 0.0589 0.062 0.611 CD4T L1
ENSG00000059758 CDK17 148436 sc-eQTL 4.16e-02 -0.0806 0.0393 0.611 CD8T L1
ENSG00000111144 LTA4H 505396 sc-eQTL 9.29e-01 -0.0038 0.0426 0.611 CD8T L1
ENSG00000111145 ELK3 354541 sc-eQTL 7.62e-01 -0.0195 0.0641 0.611 CD8T L1
ENSG00000136014 USP44 997440 sc-eQTL 2.38e-01 0.0861 0.0727 0.611 CD8T L1
ENSG00000139343 SNRPF 689988 sc-eQTL 9.20e-01 0.00526 0.0526 0.611 CD8T L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.79e-01 0.0196 0.0699 0.611 CD8T L1
ENSG00000059758 CDK17 148436 sc-eQTL 8.80e-02 -0.131 0.0762 0.604 DC L1
ENSG00000084110 HAL 552551 sc-eQTL 4.92e-01 -0.06 0.0872 0.604 DC L1
ENSG00000111144 LTA4H 505396 sc-eQTL 4.07e-01 0.0592 0.0713 0.604 DC L1
ENSG00000111145 ELK3 354541 sc-eQTL 9.90e-01 -0.0011 0.0875 0.604 DC L1
ENSG00000139343 SNRPF 689988 sc-eQTL 6.89e-01 -0.0291 0.0727 0.604 DC L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.42e-01 -0.0718 0.0932 0.604 DC L1
ENSG00000257715 AC007298.1 523593 sc-eQTL 2.31e-01 -0.101 0.084 0.604 DC L1
ENSG00000059758 CDK17 148436 sc-eQTL 9.44e-01 -0.00418 0.0595 0.611 Mono L1
ENSG00000084110 HAL 552551 sc-eQTL 2.64e-01 -0.0837 0.0748 0.611 Mono L1
ENSG00000111144 LTA4H 505396 sc-eQTL 8.01e-01 0.0213 0.0847 0.611 Mono L1
ENSG00000111145 ELK3 354541 sc-eQTL 9.49e-01 0.00362 0.0569 0.611 Mono L1
ENSG00000139343 SNRPF 689988 sc-eQTL 5.22e-01 -0.0343 0.0536 0.611 Mono L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.58e-01 -0.0756 0.0822 0.611 Mono L1
ENSG00000257715 AC007298.1 523593 sc-eQTL 9.99e-01 -7.04e-05 0.0798 0.611 Mono L1
ENSG00000059758 CDK17 148436 sc-eQTL 9.18e-01 0.00469 0.0454 0.609 NK L1
ENSG00000111144 LTA4H 505396 sc-eQTL 6.56e-01 0.0343 0.077 0.609 NK L1
ENSG00000111145 ELK3 354541 sc-eQTL 6.45e-01 0.0337 0.073 0.609 NK L1
ENSG00000139343 SNRPF 689988 sc-eQTL 9.77e-01 0.00173 0.0606 0.609 NK L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.52e-01 -0.0243 0.0767 0.609 NK L1
ENSG00000059758 CDK17 148436 sc-eQTL 2.56e-01 0.0432 0.0379 0.611 Other_T L1
ENSG00000074527 NTN4 757764 sc-eQTL 4.08e-02 -0.143 0.0696 0.611 Other_T L1
ENSG00000111144 LTA4H 505396 sc-eQTL 8.92e-01 -0.0108 0.0794 0.611 Other_T L1
ENSG00000111145 ELK3 354541 sc-eQTL 2.87e-01 -0.066 0.0618 0.611 Other_T L1
ENSG00000139343 SNRPF 689988 sc-eQTL 6.44e-01 -0.0266 0.0576 0.611 Other_T L1
ENSG00000139350 NEDD1 -358307 sc-eQTL 2.31e-01 -0.105 0.0874 0.611 Other_T L1
ENSG00000188596 CFAP54 59345 sc-eQTL 4.35e-01 0.071 0.0907 0.611 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 148436 sc-eQTL 6.64e-01 0.0375 0.0863 0.594 B_Activated L2
ENSG00000111144 LTA4H 505396 sc-eQTL 1.18e-01 0.153 0.0971 0.594 B_Activated L2
ENSG00000111145 ELK3 354541 sc-eQTL 3.10e-01 0.105 0.103 0.594 B_Activated L2
ENSG00000136014 USP44 997440 sc-eQTL 8.80e-02 0.135 0.0789 0.594 B_Activated L2
ENSG00000139343 SNRPF 689988 sc-eQTL 5.57e-01 0.0575 0.0976 0.594 B_Activated L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.91e-01 -0.0704 0.102 0.594 B_Activated L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.56e-01 -0.00402 0.0737 0.609 B_Intermediate L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.42e-01 -0.0235 0.0713 0.609 B_Intermediate L2
ENSG00000111145 ELK3 354541 sc-eQTL 1.08e-01 -0.129 0.0799 0.609 B_Intermediate L2
ENSG00000136014 USP44 997440 sc-eQTL 5.74e-02 -0.18 0.094 0.609 B_Intermediate L2
ENSG00000139343 SNRPF 689988 sc-eQTL 6.89e-01 -0.0321 0.0801 0.609 B_Intermediate L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 5.69e-01 0.0535 0.0938 0.609 B_Intermediate L2
ENSG00000059758 CDK17 148436 sc-eQTL 8.86e-01 -0.0103 0.0717 0.614 B_Memory L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.02e-01 -0.0317 0.0827 0.614 B_Memory L2
ENSG00000111145 ELK3 354541 sc-eQTL 2.42e-02 0.182 0.0804 0.614 B_Memory L2
ENSG00000136014 USP44 997440 sc-eQTL 3.31e-01 -0.0868 0.0891 0.614 B_Memory L2
ENSG00000139343 SNRPF 689988 sc-eQTL 4.54e-02 -0.172 0.0854 0.614 B_Memory L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.83e-01 0.127 0.095 0.614 B_Memory L2
ENSG00000059758 CDK17 148436 sc-eQTL 5.76e-01 -0.0333 0.0596 0.611 B_Naive1 L2
ENSG00000111144 LTA4H 505396 sc-eQTL 4.47e-01 -0.0475 0.0623 0.611 B_Naive1 L2
ENSG00000111145 ELK3 354541 sc-eQTL 8.18e-01 0.017 0.0738 0.611 B_Naive1 L2
ENSG00000136014 USP44 997440 sc-eQTL 3.08e-01 -0.0945 0.0926 0.611 B_Naive1 L2
ENSG00000139343 SNRPF 689988 sc-eQTL 6.12e-01 0.0364 0.0717 0.611 B_Naive1 L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.06e-01 0.149 0.0915 0.611 B_Naive1 L2
ENSG00000059758 CDK17 148436 sc-eQTL 1.01e-01 0.125 0.0758 0.612 B_Naive2 L2
ENSG00000111144 LTA4H 505396 sc-eQTL 4.61e-01 0.0533 0.0722 0.612 B_Naive2 L2
ENSG00000111145 ELK3 354541 sc-eQTL 7.77e-01 0.0242 0.0852 0.612 B_Naive2 L2
ENSG00000136014 USP44 997440 sc-eQTL 7.42e-01 -0.0303 0.092 0.612 B_Naive2 L2
ENSG00000139343 SNRPF 689988 sc-eQTL 2.35e-01 0.1 0.0843 0.612 B_Naive2 L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.53e-02 -0.201 0.0997 0.612 B_Naive2 L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.57e-01 0.00378 0.0693 0.609 CD4_CTL L2
ENSG00000111144 LTA4H 505396 sc-eQTL 6.98e-01 -0.0379 0.0978 0.609 CD4_CTL L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.35e-01 -0.0773 0.0989 0.609 CD4_CTL L2
ENSG00000136014 USP44 997440 sc-eQTL 6.00e-01 0.0415 0.079 0.609 CD4_CTL L2
ENSG00000139343 SNRPF 689988 sc-eQTL 8.73e-01 -0.0138 0.0861 0.609 CD4_CTL L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.09e-01 -0.101 0.0993 0.609 CD4_CTL L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.75e-02 -0.0703 0.0422 0.611 CD4_Naive L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.29e-01 0.0213 0.0615 0.611 CD4_Naive L2
ENSG00000111145 ELK3 354541 sc-eQTL 5.69e-01 -0.035 0.0614 0.611 CD4_Naive L2
ENSG00000136014 USP44 997440 sc-eQTL 3.05e-01 0.0883 0.086 0.611 CD4_Naive L2
ENSG00000139343 SNRPF 689988 sc-eQTL 3.50e-01 -0.0511 0.0545 0.611 CD4_Naive L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 9.23e-01 0.00648 0.0673 0.611 CD4_Naive L2
ENSG00000059758 CDK17 148436 sc-eQTL 1.91e-01 -0.0545 0.0415 0.611 CD4_TCM L2
ENSG00000111144 LTA4H 505396 sc-eQTL 4.60e-01 0.0523 0.0707 0.611 CD4_TCM L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.51e-01 0.0526 0.0695 0.611 CD4_TCM L2
ENSG00000136014 USP44 997440 sc-eQTL 2.20e-01 0.118 0.0959 0.611 CD4_TCM L2
ENSG00000139343 SNRPF 689988 sc-eQTL 2.40e-01 0.067 0.0569 0.611 CD4_TCM L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.34e-01 0.117 0.0776 0.611 CD4_TCM L2
ENSG00000059758 CDK17 148436 sc-eQTL 7.30e-02 0.0915 0.0508 0.611 CD4_TEM L2
ENSG00000111144 LTA4H 505396 sc-eQTL 8.72e-01 -0.0127 0.079 0.611 CD4_TEM L2
ENSG00000111145 ELK3 354541 sc-eQTL 5.72e-01 0.0415 0.0733 0.611 CD4_TEM L2
ENSG00000136014 USP44 997440 sc-eQTL 5.67e-01 0.0517 0.0902 0.611 CD4_TEM L2
ENSG00000139343 SNRPF 689988 sc-eQTL 9.41e-02 -0.128 0.0763 0.611 CD4_TEM L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 8.82e-01 -0.0135 0.0911 0.611 CD4_TEM L2
ENSG00000059758 CDK17 148436 sc-eQTL 6.90e-01 0.0196 0.0491 0.611 CD8_CTL L2
ENSG00000111144 LTA4H 505396 sc-eQTL 2.30e-01 0.107 0.0885 0.611 CD8_CTL L2
ENSG00000111145 ELK3 354541 sc-eQTL 1.18e-01 0.126 0.0804 0.611 CD8_CTL L2
ENSG00000136014 USP44 997440 sc-eQTL 7.48e-01 0.029 0.0901 0.611 CD8_CTL L2
ENSG00000139343 SNRPF 689988 sc-eQTL 9.33e-01 -0.00622 0.0743 0.611 CD8_CTL L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.79e-01 0.0591 0.0832 0.611 CD8_CTL L2
ENSG00000059758 CDK17 148436 sc-eQTL 3.36e-02 -0.127 0.0592 0.611 CD8_Naive L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.10e-01 0.0267 0.0717 0.611 CD8_Naive L2
ENSG00000111145 ELK3 354541 sc-eQTL 9.18e-01 0.00784 0.0758 0.611 CD8_Naive L2
ENSG00000136014 USP44 997440 sc-eQTL 3.93e-01 0.068 0.0795 0.611 CD8_Naive L2
ENSG00000139343 SNRPF 689988 sc-eQTL 2.78e-01 -0.074 0.068 0.611 CD8_Naive L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 5.71e-01 0.046 0.0811 0.611 CD8_Naive L2
ENSG00000059758 CDK17 148436 sc-eQTL 3.60e-01 0.0591 0.0643 0.606 CD8_TCM L2
ENSG00000111144 LTA4H 505396 sc-eQTL 9.75e-01 0.00303 0.0948 0.606 CD8_TCM L2
ENSG00000111145 ELK3 354541 sc-eQTL 7.34e-01 -0.0273 0.0802 0.606 CD8_TCM L2
ENSG00000136014 USP44 997440 sc-eQTL 8.71e-01 -0.0142 0.0869 0.606 CD8_TCM L2
ENSG00000139343 SNRPF 689988 sc-eQTL 1.82e-01 0.123 0.092 0.606 CD8_TCM L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 5.12e-01 -0.0594 0.0904 0.606 CD8_TCM L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.10e-01 -0.00907 0.0806 0.605 CD8_TEM L2
ENSG00000111144 LTA4H 505396 sc-eQTL 6.16e-01 -0.0496 0.0986 0.605 CD8_TEM L2
ENSG00000111145 ELK3 354541 sc-eQTL 8.33e-01 0.0205 0.097 0.605 CD8_TEM L2
ENSG00000136014 USP44 997440 sc-eQTL 7.13e-01 -0.0304 0.0825 0.605 CD8_TEM L2
ENSG00000139343 SNRPF 689988 sc-eQTL 4.41e-01 0.0695 0.09 0.605 CD8_TEM L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 6.40e-01 -0.0458 0.0978 0.605 CD8_TEM L2
ENSG00000059758 CDK17 148436 sc-eQTL 7.57e-01 -0.0169 0.0544 0.608 MAIT L2
ENSG00000074527 NTN4 757764 sc-eQTL 6.03e-02 -0.137 0.0728 0.608 MAIT L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.74e-01 -0.0242 0.0841 0.608 MAIT L2
ENSG00000111145 ELK3 354541 sc-eQTL 1.28e-01 -0.107 0.0702 0.608 MAIT L2
ENSG00000139343 SNRPF 689988 sc-eQTL 4.54e-02 -0.163 0.081 0.608 MAIT L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 8.94e-01 -0.0123 0.0918 0.608 MAIT L2
ENSG00000188596 CFAP54 59345 sc-eQTL 8.50e-01 -0.0172 0.091 0.608 MAIT L2
ENSG00000059758 CDK17 148436 sc-eQTL 2.04e-02 0.132 0.0565 0.609 NK_CD56bright L2
ENSG00000111144 LTA4H 505396 sc-eQTL 8.54e-01 0.0156 0.0847 0.609 NK_CD56bright L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.05e-01 -0.0749 0.0897 0.609 NK_CD56bright L2
ENSG00000139343 SNRPF 689988 sc-eQTL 6.41e-01 -0.0438 0.094 0.609 NK_CD56bright L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.92e-01 -0.025 0.0949 0.609 NK_CD56bright L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.35e-01 -0.004 0.0492 0.612 NK_CD56dim L2
ENSG00000111144 LTA4H 505396 sc-eQTL 6.64e-01 0.0386 0.0889 0.612 NK_CD56dim L2
ENSG00000111145 ELK3 354541 sc-eQTL 9.88e-01 -0.00122 0.0788 0.612 NK_CD56dim L2
ENSG00000139343 SNRPF 689988 sc-eQTL 2.33e-01 -0.0894 0.0747 0.612 NK_CD56dim L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.85e-01 -0.075 0.0862 0.612 NK_CD56dim L2
ENSG00000059758 CDK17 148436 sc-eQTL 3.65e-01 -0.0706 0.0777 0.616 NK_HLA L2
ENSG00000111144 LTA4H 505396 sc-eQTL 6.78e-01 -0.0423 0.102 0.616 NK_HLA L2
ENSG00000111145 ELK3 354541 sc-eQTL 8.15e-01 -0.0221 0.0946 0.616 NK_HLA L2
ENSG00000139343 SNRPF 689988 sc-eQTL 3.11e-01 0.1 0.0984 0.616 NK_HLA L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.27e-01 0.0326 0.0933 0.616 NK_HLA L2
ENSG00000059758 CDK17 148436 sc-eQTL 5.28e-01 -0.0339 0.0536 0.612 NK_cytokine L2
ENSG00000111144 LTA4H 505396 sc-eQTL 4.71e-01 0.0655 0.0907 0.612 NK_cytokine L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.66e-01 0.0634 0.0868 0.612 NK_cytokine L2
ENSG00000139343 SNRPF 689988 sc-eQTL 7.85e-01 -0.0201 0.0736 0.612 NK_cytokine L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.56e-01 0.129 0.0906 0.612 NK_cytokine L2
ENSG00000059758 CDK17 148436 sc-eQTL 7.42e-01 0.0346 0.105 0.611 PB L2
ENSG00000111144 LTA4H 505396 sc-eQTL 8.79e-01 0.0141 0.0925 0.611 PB L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.67e-01 0.0863 0.118 0.611 PB L2
ENSG00000136014 USP44 997440 sc-eQTL 1.65e-01 0.152 0.109 0.611 PB L2
ENSG00000139343 SNRPF 689988 sc-eQTL 4.68e-01 -0.0841 0.115 0.611 PB L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.28e-01 -0.135 0.137 0.611 PB L2
ENSG00000059758 CDK17 148436 sc-eQTL 9.54e-01 0.00347 0.0595 0.609 Pro_T L2
ENSG00000074527 NTN4 757764 sc-eQTL 2.83e-01 -0.0718 0.0666 0.609 Pro_T L2
ENSG00000111144 LTA4H 505396 sc-eQTL 1.85e-01 0.104 0.0783 0.609 Pro_T L2
ENSG00000111145 ELK3 354541 sc-eQTL 9.23e-01 0.0092 0.0951 0.609 Pro_T L2
ENSG00000139343 SNRPF 689988 sc-eQTL 7.02e-01 0.0229 0.0599 0.609 Pro_T L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.94e-01 0.0596 0.087 0.609 Pro_T L2
ENSG00000188596 CFAP54 59345 sc-eQTL 3.98e-01 0.0596 0.0703 0.609 Pro_T L2
ENSG00000059758 CDK17 148436 sc-eQTL 5.68e-01 -0.0367 0.0642 0.611 Treg L2
ENSG00000111144 LTA4H 505396 sc-eQTL 3.36e-01 0.0782 0.0812 0.611 Treg L2
ENSG00000111145 ELK3 354541 sc-eQTL 9.38e-02 -0.123 0.0732 0.611 Treg L2
ENSG00000136014 USP44 997440 sc-eQTL 1.64e-01 0.115 0.0824 0.611 Treg L2
ENSG00000139343 SNRPF 689988 sc-eQTL 2.44e-01 0.0994 0.0851 0.611 Treg L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.91e-01 0.0657 0.0951 0.611 Treg L2
ENSG00000059758 CDK17 148436 sc-eQTL 6.08e-01 -0.0422 0.0822 0.607 cDC L2
ENSG00000084110 HAL 552551 sc-eQTL 6.25e-01 0.0419 0.0855 0.607 cDC L2
ENSG00000111144 LTA4H 505396 sc-eQTL 1.48e-01 0.106 0.0729 0.607 cDC L2
ENSG00000111145 ELK3 354541 sc-eQTL 5.33e-01 -0.0604 0.0966 0.607 cDC L2
ENSG00000139343 SNRPF 689988 sc-eQTL 6.01e-01 0.0424 0.0809 0.607 cDC L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.82e-01 0.0695 0.0985 0.607 cDC L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 2.74e-01 -0.091 0.0829 0.607 cDC L2
ENSG00000059758 CDK17 148436 sc-eQTL 3.42e-01 -0.0657 0.069 0.611 cMono_IL1B L2
ENSG00000084110 HAL 552551 sc-eQTL 1.56e-01 -0.107 0.0751 0.611 cMono_IL1B L2
ENSG00000111144 LTA4H 505396 sc-eQTL 5.38e-01 0.0502 0.0814 0.611 cMono_IL1B L2
ENSG00000111145 ELK3 354541 sc-eQTL 3.33e-01 -0.0607 0.0626 0.611 cMono_IL1B L2
ENSG00000139343 SNRPF 689988 sc-eQTL 5.20e-01 -0.0417 0.0647 0.611 cMono_IL1B L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 2.61e-01 -0.1 0.0889 0.611 cMono_IL1B L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 7.64e-01 -0.0251 0.0832 0.611 cMono_IL1B L2
ENSG00000059758 CDK17 148436 sc-eQTL 4.95e-01 -0.0534 0.0781 0.611 cMono_S100A L2
ENSG00000084110 HAL 552551 sc-eQTL 5.71e-01 0.0498 0.0877 0.611 cMono_S100A L2
ENSG00000111144 LTA4H 505396 sc-eQTL 9.75e-01 0.00278 0.0877 0.611 cMono_S100A L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.68e-01 0.0518 0.0713 0.611 cMono_S100A L2
ENSG00000139343 SNRPF 689988 sc-eQTL 7.32e-01 0.0242 0.0706 0.611 cMono_S100A L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 3.80e-01 -0.0837 0.0951 0.611 cMono_S100A L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 8.76e-01 0.014 0.0897 0.611 cMono_S100A L2
ENSG00000059758 CDK17 148436 sc-eQTL 2.82e-01 0.0857 0.0793 0.6 gdT L2
ENSG00000074527 NTN4 757764 sc-eQTL 6.38e-01 -0.0431 0.0913 0.6 gdT L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.39e-01 -0.0398 0.119 0.6 gdT L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.61e-01 0.0814 0.11 0.6 gdT L2
ENSG00000139343 SNRPF 689988 sc-eQTL 3.85e-01 0.0925 0.106 0.6 gdT L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 9.39e-01 -0.00894 0.117 0.6 gdT L2
ENSG00000188596 CFAP54 59345 sc-eQTL 6.49e-01 0.0469 0.103 0.6 gdT L2
ENSG00000059758 CDK17 148436 sc-eQTL 2.50e-01 -0.103 0.089 0.602 intMono L2
ENSG00000084110 HAL 552551 sc-eQTL 2.75e-01 -0.0985 0.09 0.602 intMono L2
ENSG00000111144 LTA4H 505396 sc-eQTL 7.05e-01 0.0352 0.0926 0.602 intMono L2
ENSG00000111145 ELK3 354541 sc-eQTL 4.47e-01 0.0628 0.0824 0.602 intMono L2
ENSG00000139343 SNRPF 689988 sc-eQTL 1.40e-01 -0.13 0.0877 0.602 intMono L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.61e-01 -0.0279 0.0916 0.602 intMono L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 2.22e-01 0.112 0.0918 0.602 intMono L2
ENSG00000059758 CDK17 148436 sc-eQTL 6.90e-01 -0.0282 0.0707 0.597 ncMono L2
ENSG00000084110 HAL 552551 sc-eQTL 1.70e-01 -0.108 0.0786 0.597 ncMono L2
ENSG00000111144 LTA4H 505396 sc-eQTL 9.80e-01 -0.00225 0.088 0.597 ncMono L2
ENSG00000111145 ELK3 354541 sc-eQTL 5.52e-01 0.045 0.0755 0.597 ncMono L2
ENSG00000139343 SNRPF 689988 sc-eQTL 3.46e-01 -0.0728 0.077 0.597 ncMono L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 2.02e-01 0.104 0.0817 0.597 ncMono L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 1.31e-01 -0.141 0.093 0.597 ncMono L2
ENSG00000059758 CDK17 148436 sc-eQTL 5.58e-02 -0.179 0.0929 0.616 pDC L2
ENSG00000084110 HAL 552551 sc-eQTL 9.61e-01 0.00385 0.0794 0.616 pDC L2
ENSG00000111144 LTA4H 505396 sc-eQTL 4.05e-02 0.181 0.0876 0.616 pDC L2
ENSG00000111145 ELK3 354541 sc-eQTL 7.66e-01 0.0324 0.109 0.616 pDC L2
ENSG00000139343 SNRPF 689988 sc-eQTL 9.95e-01 0.000565 0.0948 0.616 pDC L2
ENSG00000139350 NEDD1 -358307 sc-eQTL 4.01e-01 -0.0878 0.104 0.616 pDC L2
ENSG00000257715 AC007298.1 523593 sc-eQTL 9.01e-01 0.0112 0.0897 0.616 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 148436 sc-eQTL 9.12e-01 -0.00693 0.0624 0.611 B_Memory LOneK1K
ENSG00000111144 LTA4H 505396 sc-eQTL 9.56e-01 -0.0036 0.0648 0.611 B_Memory LOneK1K
ENSG00000111145 ELK3 354541 sc-eQTL 5.06e-01 0.0492 0.0739 0.611 B_Memory LOneK1K
ENSG00000136014 USP44 997440 sc-eQTL 8.37e-02 -0.159 0.0916 0.611 B_Memory LOneK1K
ENSG00000139343 SNRPF 689988 sc-eQTL 1.02e-01 -0.117 0.0713 0.611 B_Memory LOneK1K
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.25e-01 0.144 0.0936 0.611 B_Memory LOneK1K
ENSG00000059758 CDK17 148436 sc-eQTL 9.44e-01 0.0038 0.0537 0.611 B_Naive LOneK1K
ENSG00000111144 LTA4H 505396 sc-eQTL 8.50e-01 -0.0114 0.0603 0.611 B_Naive LOneK1K
ENSG00000111145 ELK3 354541 sc-eQTL 8.50e-01 -0.013 0.0687 0.611 B_Naive LOneK1K
ENSG00000136014 USP44 997440 sc-eQTL 1.83e-01 -0.112 0.0836 0.611 B_Naive LOneK1K
ENSG00000139343 SNRPF 689988 sc-eQTL 4.45e-01 0.0529 0.0691 0.611 B_Naive LOneK1K
ENSG00000139350 NEDD1 -358307 sc-eQTL 8.12e-01 -0.0218 0.0915 0.611 B_Naive LOneK1K
ENSG00000059758 CDK17 148436 sc-eQTL 2.60e-01 -0.0703 0.0623 0.611 CD14_Mono LOneK1K
ENSG00000084110 HAL 552551 sc-eQTL 4.37e-01 -0.0589 0.0755 0.611 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 505396 sc-eQTL 5.23e-01 0.053 0.0829 0.611 CD14_Mono LOneK1K
ENSG00000111145 ELK3 354541 sc-eQTL 9.07e-01 -0.00698 0.06 0.611 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 689988 sc-eQTL 7.94e-01 -0.0151 0.0579 0.611 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -358307 sc-eQTL 1.57e-01 -0.128 0.0904 0.611 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 523593 sc-eQTL 7.44e-01 0.0275 0.0841 0.611 CD14_Mono LOneK1K
ENSG00000059758 CDK17 148436 sc-eQTL 3.05e-01 -0.0661 0.0644 0.608 CD16_Mono LOneK1K
ENSG00000084110 HAL 552551 sc-eQTL 1.25e-01 -0.117 0.0758 0.608 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 505396 sc-eQTL 9.40e-01 -0.00636 0.0845 0.608 CD16_Mono LOneK1K
ENSG00000111145 ELK3 354541 sc-eQTL 8.35e-01 0.0131 0.0626 0.608 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 689988 sc-eQTL 2.31e-01 -0.0773 0.0643 0.608 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -358307 sc-eQTL 7.52e-01 0.0262 0.0827 0.608 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 523593 sc-eQTL 5.94e-01 -0.0467 0.0875 0.608 CD16_Mono LOneK1K
ENSG00000059758 CDK17 148436 sc-eQTL 3.84e-01 -0.0401 0.046 0.612 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 505396 sc-eQTL 6.37e-01 0.0379 0.0801 0.612 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 354541 sc-eQTL 6.14e-01 0.037 0.0733 0.612 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 689988 sc-eQTL 5.59e-01 -0.0367 0.0627 0.612 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -358307 sc-eQTL 9.19e-01 -0.00794 0.0782 0.612 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139343 SNRPF 689988 eQTL 0.0373 0.019 0.00911 0.00104 0.0 0.387
ENSG00000139350 NEDD1 -358307 eQTL 0.000431 -0.0858 0.0243 0.0 0.0 0.387
ENSG00000188596 CFAP54 59341 eQTL 2.19e-05 -0.0862 0.0202 0.0 0.0 0.387
ENSG00000257715 AC007298.1 523593 eQTL 0.0273 0.0431 0.0195 0.0 0.0 0.387

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188596 CFAP54 59341 7.46e-06 9.33e-06 1.39e-06 4.75e-06 2.52e-06 3.88e-06 1.01e-05 2.15e-06 8.41e-06 4.99e-06 1.06e-05 5.06e-06 1.31e-05 3.85e-06 2.36e-06 6.61e-06 4.13e-06 6.85e-06 2.72e-06 2.82e-06 5.07e-06 8.39e-06 7.23e-06 3.43e-06 1.25e-05 4.44e-06 4.8e-06 3.57e-06 9.57e-06 8.64e-06 4.73e-06 9.91e-07 1.22e-06 3.57e-06 3.93e-06 2.78e-06 1.77e-06 1.91e-06 2.04e-06 1.07e-06 1.28e-06 1.06e-05 1.42e-06 2.64e-07 9.15e-07 1.78e-06 1.73e-06 7.15e-07 4.9e-07