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Genes within 1Mb (chr12:96538180:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 137700 sc-eQTL 9.44e-01 -0.00356 0.0507 0.703 B L1
ENSG00000111144 LTA4H 494660 sc-eQTL 1.79e-01 0.0847 0.0628 0.703 B L1
ENSG00000111145 ELK3 343805 sc-eQTL 6.00e-01 -0.0352 0.0671 0.703 B L1
ENSG00000136014 USP44 986704 sc-eQTL 1.03e-03 -0.268 0.0806 0.703 B L1
ENSG00000139343 SNRPF 679252 sc-eQTL 6.74e-01 0.0256 0.0609 0.703 B L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.00e-02 -0.182 0.0881 0.703 B L1
ENSG00000059758 CDK17 137700 sc-eQTL 5.74e-01 -0.0235 0.0417 0.703 CD4T L1
ENSG00000111144 LTA4H 494660 sc-eQTL 3.65e-01 -0.0519 0.0572 0.703 CD4T L1
ENSG00000111145 ELK3 343805 sc-eQTL 5.89e-01 -0.0336 0.062 0.703 CD4T L1
ENSG00000136014 USP44 986704 sc-eQTL 8.27e-02 0.153 0.0879 0.703 CD4T L1
ENSG00000139343 SNRPF 679252 sc-eQTL 4.83e-01 -0.0381 0.0542 0.703 CD4T L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 6.52e-01 -0.0302 0.0668 0.703 CD4T L1
ENSG00000059758 CDK17 137700 sc-eQTL 8.10e-01 -0.0103 0.043 0.703 CD8T L1
ENSG00000111144 LTA4H 494660 sc-eQTL 7.31e-01 -0.0159 0.0461 0.703 CD8T L1
ENSG00000111145 ELK3 343805 sc-eQTL 4.95e-01 -0.0475 0.0694 0.703 CD8T L1
ENSG00000136014 USP44 986704 sc-eQTL 3.33e-01 0.0765 0.0788 0.703 CD8T L1
ENSG00000139343 SNRPF 679252 sc-eQTL 1.10e-01 0.0909 0.0566 0.703 CD8T L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.62e-01 -0.0556 0.0756 0.703 CD8T L1
ENSG00000059758 CDK17 137700 sc-eQTL 9.82e-01 0.00176 0.0799 0.698 DC L1
ENSG00000084110 HAL 541815 sc-eQTL 6.27e-01 -0.0443 0.0909 0.698 DC L1
ENSG00000111144 LTA4H 494660 sc-eQTL 1.76e-01 0.1 0.074 0.698 DC L1
ENSG00000111145 ELK3 343805 sc-eQTL 6.93e-02 -0.165 0.0903 0.698 DC L1
ENSG00000139343 SNRPF 679252 sc-eQTL 2.27e-01 0.0915 0.0755 0.698 DC L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.32e-01 -0.0942 0.097 0.698 DC L1
ENSG00000257715 AC007298.1 512857 sc-eQTL 6.14e-01 -0.0443 0.0877 0.698 DC L1
ENSG00000059758 CDK17 137700 sc-eQTL 3.26e-01 -0.0632 0.0642 0.703 Mono L1
ENSG00000084110 HAL 541815 sc-eQTL 7.71e-01 0.0236 0.0811 0.703 Mono L1
ENSG00000111144 LTA4H 494660 sc-eQTL 6.40e-02 0.169 0.0908 0.703 Mono L1
ENSG00000111145 ELK3 343805 sc-eQTL 4.75e-01 -0.044 0.0614 0.703 Mono L1
ENSG00000139343 SNRPF 679252 sc-eQTL 5.37e-01 -0.0358 0.0579 0.703 Mono L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 1.48e-01 -0.129 0.0886 0.703 Mono L1
ENSG00000257715 AC007298.1 512857 sc-eQTL 1.06e-01 0.139 0.0858 0.703 Mono L1
ENSG00000059758 CDK17 137700 sc-eQTL 1.32e-02 0.119 0.0476 0.704 NK L1
ENSG00000111144 LTA4H 494660 sc-eQTL 2.77e-01 -0.0892 0.0818 0.704 NK L1
ENSG00000111145 ELK3 343805 sc-eQTL 8.53e-01 -0.0144 0.0778 0.704 NK L1
ENSG00000139343 SNRPF 679252 sc-eQTL 5.72e-01 0.0364 0.0645 0.704 NK L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.55e-01 -0.061 0.0816 0.704 NK L1
ENSG00000059758 CDK17 137700 sc-eQTL 1.39e-01 0.0599 0.0404 0.703 Other_T L1
ENSG00000074527 NTN4 747028 sc-eQTL 4.91e-01 -0.0516 0.0749 0.703 Other_T L1
ENSG00000111144 LTA4H 494660 sc-eQTL 6.13e-01 -0.043 0.0847 0.703 Other_T L1
ENSG00000111145 ELK3 343805 sc-eQTL 7.72e-01 -0.0191 0.0661 0.703 Other_T L1
ENSG00000139343 SNRPF 679252 sc-eQTL 6.59e-01 0.0272 0.0615 0.703 Other_T L1
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.58e-01 -0.086 0.0934 0.703 Other_T L1
ENSG00000188596 CFAP54 48609 sc-eQTL 5.28e-01 0.0612 0.0969 0.703 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 137700 sc-eQTL 6.69e-01 0.0402 0.0938 0.702 B_Activated L2
ENSG00000111144 LTA4H 494660 sc-eQTL 1.58e-01 0.15 0.106 0.702 B_Activated L2
ENSG00000111145 ELK3 343805 sc-eQTL 2.49e-01 0.13 0.112 0.702 B_Activated L2
ENSG00000136014 USP44 986704 sc-eQTL 1.75e-01 0.117 0.086 0.702 B_Activated L2
ENSG00000139343 SNRPF 679252 sc-eQTL 2.67e-01 0.118 0.106 0.702 B_Activated L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.62e-01 -0.101 0.111 0.702 B_Activated L2
ENSG00000059758 CDK17 137700 sc-eQTL 1.54e-01 0.114 0.0795 0.702 B_Intermediate L2
ENSG00000111144 LTA4H 494660 sc-eQTL 1.20e-01 0.12 0.077 0.702 B_Intermediate L2
ENSG00000111145 ELK3 343805 sc-eQTL 1.07e-01 -0.141 0.0868 0.702 B_Intermediate L2
ENSG00000136014 USP44 986704 sc-eQTL 2.23e-03 -0.312 0.101 0.702 B_Intermediate L2
ENSG00000139343 SNRPF 679252 sc-eQTL 5.43e-01 -0.0529 0.0869 0.702 B_Intermediate L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.91e-01 0.0701 0.102 0.702 B_Intermediate L2
ENSG00000059758 CDK17 137700 sc-eQTL 9.17e-01 0.00811 0.0782 0.707 B_Memory L2
ENSG00000111144 LTA4H 494660 sc-eQTL 6.13e-01 -0.0457 0.0902 0.707 B_Memory L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.65e-01 0.0265 0.0887 0.707 B_Memory L2
ENSG00000136014 USP44 986704 sc-eQTL 1.91e-02 -0.227 0.0961 0.707 B_Memory L2
ENSG00000139343 SNRPF 679252 sc-eQTL 9.67e-01 0.00389 0.094 0.707 B_Memory L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 9.46e-02 0.174 0.103 0.707 B_Memory L2
ENSG00000059758 CDK17 137700 sc-eQTL 6.49e-01 -0.0291 0.0638 0.703 B_Naive1 L2
ENSG00000111144 LTA4H 494660 sc-eQTL 3.39e-01 0.0638 0.0667 0.703 B_Naive1 L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.71e-01 0.0448 0.0789 0.703 B_Naive1 L2
ENSG00000136014 USP44 986704 sc-eQTL 1.09e-02 -0.251 0.0978 0.703 B_Naive1 L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.72e-02 0.152 0.0761 0.703 B_Naive1 L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 5.13e-01 -0.0646 0.0984 0.703 B_Naive1 L2
ENSG00000059758 CDK17 137700 sc-eQTL 8.83e-01 0.0121 0.0818 0.704 B_Naive2 L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.06e-01 0.0293 0.0775 0.704 B_Naive2 L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.99e-01 -0.0481 0.0914 0.704 B_Naive2 L2
ENSG00000136014 USP44 986704 sc-eQTL 6.67e-01 -0.0425 0.0987 0.704 B_Naive2 L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.63e-01 0.0667 0.0906 0.704 B_Naive2 L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 8.27e-03 -0.283 0.106 0.704 B_Naive2 L2
ENSG00000059758 CDK17 137700 sc-eQTL 9.04e-01 0.00892 0.0735 0.709 CD4_CTL L2
ENSG00000111144 LTA4H 494660 sc-eQTL 3.68e-02 -0.216 0.103 0.709 CD4_CTL L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.47e-01 0.0633 0.105 0.709 CD4_CTL L2
ENSG00000136014 USP44 986704 sc-eQTL 6.38e-01 0.0395 0.0837 0.709 CD4_CTL L2
ENSG00000139343 SNRPF 679252 sc-eQTL 9.11e-01 -0.0102 0.0913 0.709 CD4_CTL L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 9.90e-02 -0.174 0.105 0.709 CD4_CTL L2
ENSG00000059758 CDK17 137700 sc-eQTL 3.98e-01 -0.0386 0.0456 0.703 CD4_Naive L2
ENSG00000111144 LTA4H 494660 sc-eQTL 2.38e-01 -0.0778 0.0658 0.703 CD4_Naive L2
ENSG00000111145 ELK3 343805 sc-eQTL 4.14e-01 -0.054 0.0659 0.703 CD4_Naive L2
ENSG00000136014 USP44 986704 sc-eQTL 3.77e-02 0.192 0.0916 0.703 CD4_Naive L2
ENSG00000139343 SNRPF 679252 sc-eQTL 8.18e-01 -0.0135 0.0587 0.703 CD4_Naive L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.79e-01 -0.0636 0.0721 0.703 CD4_Naive L2
ENSG00000059758 CDK17 137700 sc-eQTL 8.30e-01 -0.00963 0.0448 0.703 CD4_TCM L2
ENSG00000111144 LTA4H 494660 sc-eQTL 1.75e-01 -0.103 0.0757 0.703 CD4_TCM L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.35e-01 0.0254 0.0748 0.703 CD4_TCM L2
ENSG00000136014 USP44 986704 sc-eQTL 7.33e-01 0.0353 0.103 0.703 CD4_TCM L2
ENSG00000139343 SNRPF 679252 sc-eQTL 2.38e-01 -0.0724 0.0611 0.703 CD4_TCM L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.92e-01 0.0717 0.0837 0.703 CD4_TCM L2
ENSG00000059758 CDK17 137700 sc-eQTL 2.91e-01 0.0585 0.0553 0.703 CD4_TEM L2
ENSG00000111144 LTA4H 494660 sc-eQTL 4.41e-01 0.066 0.0855 0.703 CD4_TEM L2
ENSG00000111145 ELK3 343805 sc-eQTL 8.19e-01 -0.0182 0.0796 0.703 CD4_TEM L2
ENSG00000136014 USP44 986704 sc-eQTL 5.05e-01 0.0653 0.0978 0.703 CD4_TEM L2
ENSG00000139343 SNRPF 679252 sc-eQTL 2.34e-01 -0.0991 0.083 0.703 CD4_TEM L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 5.39e-01 -0.0608 0.0987 0.703 CD4_TEM L2
ENSG00000059758 CDK17 137700 sc-eQTL 9.73e-02 0.089 0.0534 0.703 CD8_CTL L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.52e-01 0.0308 0.0971 0.703 CD8_CTL L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.79e-01 0.0491 0.0884 0.703 CD8_CTL L2
ENSG00000136014 USP44 986704 sc-eQTL 4.83e-01 0.0692 0.0984 0.703 CD8_CTL L2
ENSG00000139343 SNRPF 679252 sc-eQTL 5.51e-01 0.0485 0.0812 0.703 CD8_CTL L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.24e-02 -0.184 0.0903 0.703 CD8_CTL L2
ENSG00000059758 CDK17 137700 sc-eQTL 5.59e-01 -0.038 0.0649 0.703 CD8_Naive L2
ENSG00000111144 LTA4H 494660 sc-eQTL 5.95e-01 -0.0413 0.0778 0.703 CD8_Naive L2
ENSG00000111145 ELK3 343805 sc-eQTL 3.96e-01 -0.0698 0.0822 0.703 CD8_Naive L2
ENSG00000136014 USP44 986704 sc-eQTL 3.00e-01 0.0895 0.0862 0.703 CD8_Naive L2
ENSG00000139343 SNRPF 679252 sc-eQTL 7.52e-02 0.131 0.0734 0.703 CD8_Naive L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 6.20e-01 0.0438 0.088 0.703 CD8_Naive L2
ENSG00000059758 CDK17 137700 sc-eQTL 3.79e-01 0.0609 0.0691 0.697 CD8_TCM L2
ENSG00000111144 LTA4H 494660 sc-eQTL 9.60e-02 -0.169 0.101 0.697 CD8_TCM L2
ENSG00000111145 ELK3 343805 sc-eQTL 9.25e-01 -0.00817 0.0862 0.697 CD8_TCM L2
ENSG00000136014 USP44 986704 sc-eQTL 3.59e-01 -0.0857 0.0931 0.697 CD8_TCM L2
ENSG00000139343 SNRPF 679252 sc-eQTL 6.01e-01 0.0519 0.0991 0.697 CD8_TCM L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 8.25e-01 -0.0215 0.0971 0.697 CD8_TCM L2
ENSG00000059758 CDK17 137700 sc-eQTL 9.08e-01 -0.0104 0.0897 0.703 CD8_TEM L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.26e-01 0.0386 0.11 0.703 CD8_TEM L2
ENSG00000111145 ELK3 343805 sc-eQTL 8.65e-01 -0.0183 0.108 0.703 CD8_TEM L2
ENSG00000136014 USP44 986704 sc-eQTL 9.61e-01 0.00449 0.092 0.703 CD8_TEM L2
ENSG00000139343 SNRPF 679252 sc-eQTL 9.51e-01 -0.0062 0.1 0.703 CD8_TEM L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 8.63e-01 -0.0189 0.109 0.703 CD8_TEM L2
ENSG00000059758 CDK17 137700 sc-eQTL 5.90e-01 -0.0314 0.0583 0.703 MAIT L2
ENSG00000074527 NTN4 747028 sc-eQTL 6.18e-01 -0.0392 0.0786 0.703 MAIT L2
ENSG00000111144 LTA4H 494660 sc-eQTL 2.18e-01 -0.111 0.0898 0.703 MAIT L2
ENSG00000111145 ELK3 343805 sc-eQTL 8.31e-01 -0.0161 0.0756 0.703 MAIT L2
ENSG00000139343 SNRPF 679252 sc-eQTL 6.74e-01 -0.0369 0.0876 0.703 MAIT L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 8.55e-01 -0.0181 0.0984 0.703 MAIT L2
ENSG00000188596 CFAP54 48609 sc-eQTL 9.96e-01 0.000518 0.0975 0.703 MAIT L2
ENSG00000059758 CDK17 137700 sc-eQTL 9.43e-03 0.162 0.0618 0.7 NK_CD56bright L2
ENSG00000111144 LTA4H 494660 sc-eQTL 8.90e-01 -0.0129 0.093 0.7 NK_CD56bright L2
ENSG00000111145 ELK3 343805 sc-eQTL 6.56e-01 -0.044 0.0987 0.7 NK_CD56bright L2
ENSG00000139343 SNRPF 679252 sc-eQTL 9.34e-03 0.267 0.102 0.7 NK_CD56bright L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 1.76e-01 0.141 0.104 0.7 NK_CD56bright L2
ENSG00000059758 CDK17 137700 sc-eQTL 1.33e-01 0.0783 0.052 0.705 NK_CD56dim L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.51e-01 -0.03 0.0944 0.705 NK_CD56dim L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.39e-01 0.0279 0.0836 0.705 NK_CD56dim L2
ENSG00000139343 SNRPF 679252 sc-eQTL 3.66e-01 -0.072 0.0794 0.705 NK_CD56dim L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 1.77e-01 -0.124 0.0912 0.705 NK_CD56dim L2
ENSG00000059758 CDK17 137700 sc-eQTL 3.62e-01 0.0757 0.0828 0.703 NK_HLA L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.18e-01 -0.0393 0.109 0.703 NK_HLA L2
ENSG00000111145 ELK3 343805 sc-eQTL 6.91e-01 -0.0402 0.101 0.703 NK_HLA L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.85e-01 0.0735 0.105 0.703 NK_HLA L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 7.60e-01 -0.0304 0.0995 0.703 NK_HLA L2
ENSG00000059758 CDK17 137700 sc-eQTL 8.61e-02 0.0984 0.0571 0.705 NK_cytokine L2
ENSG00000111144 LTA4H 494660 sc-eQTL 5.92e-01 -0.0521 0.0971 0.705 NK_cytokine L2
ENSG00000111145 ELK3 343805 sc-eQTL 3.30e-01 -0.0907 0.0928 0.705 NK_cytokine L2
ENSG00000139343 SNRPF 679252 sc-eQTL 2.25e-01 0.0955 0.0785 0.705 NK_cytokine L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 7.74e-01 0.028 0.0974 0.705 NK_cytokine L2
ENSG00000059758 CDK17 137700 sc-eQTL 1.44e-01 -0.162 0.11 0.719 PB L2
ENSG00000111144 LTA4H 494660 sc-eQTL 8.09e-01 -0.0237 0.0977 0.719 PB L2
ENSG00000111145 ELK3 343805 sc-eQTL 9.92e-01 -0.00132 0.125 0.719 PB L2
ENSG00000136014 USP44 986704 sc-eQTL 8.71e-01 0.0189 0.116 0.719 PB L2
ENSG00000139343 SNRPF 679252 sc-eQTL 5.16e-01 -0.0795 0.122 0.719 PB L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 6.73e-01 -0.0613 0.145 0.719 PB L2
ENSG00000059758 CDK17 137700 sc-eQTL 8.93e-01 0.00855 0.0637 0.7 Pro_T L2
ENSG00000074527 NTN4 747028 sc-eQTL 1.53e-01 -0.102 0.0712 0.7 Pro_T L2
ENSG00000111144 LTA4H 494660 sc-eQTL 5.02e-01 0.0565 0.0841 0.7 Pro_T L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.59e-01 -0.0595 0.102 0.7 Pro_T L2
ENSG00000139343 SNRPF 679252 sc-eQTL 7.47e-01 -0.0207 0.0642 0.7 Pro_T L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 5.74e-01 0.0524 0.0932 0.7 Pro_T L2
ENSG00000188596 CFAP54 48609 sc-eQTL 7.62e-01 0.0229 0.0754 0.7 Pro_T L2
ENSG00000059758 CDK17 137700 sc-eQTL 8.28e-01 0.0151 0.0697 0.703 Treg L2
ENSG00000111144 LTA4H 494660 sc-eQTL 4.09e-01 -0.073 0.0882 0.703 Treg L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.80e-01 0.0224 0.08 0.703 Treg L2
ENSG00000136014 USP44 986704 sc-eQTL 5.97e-01 0.0475 0.0898 0.703 Treg L2
ENSG00000139343 SNRPF 679252 sc-eQTL 1.09e-01 0.148 0.0921 0.703 Treg L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 5.25e-01 0.0658 0.103 0.703 Treg L2
ENSG00000059758 CDK17 137700 sc-eQTL 3.50e-01 0.0802 0.0856 0.695 cDC L2
ENSG00000084110 HAL 541815 sc-eQTL 6.66e-01 -0.0386 0.0891 0.695 cDC L2
ENSG00000111144 LTA4H 494660 sc-eQTL 9.75e-02 0.126 0.0758 0.695 cDC L2
ENSG00000111145 ELK3 343805 sc-eQTL 1.37e-01 -0.15 0.1 0.695 cDC L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.35e-01 0.0659 0.0843 0.695 cDC L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.91e-01 -0.0883 0.103 0.695 cDC L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 7.99e-01 0.0221 0.0867 0.695 cDC L2
ENSG00000059758 CDK17 137700 sc-eQTL 1.07e-01 -0.12 0.0738 0.703 cMono_IL1B L2
ENSG00000084110 HAL 541815 sc-eQTL 8.56e-01 -0.0147 0.081 0.703 cMono_IL1B L2
ENSG00000111144 LTA4H 494660 sc-eQTL 2.91e-02 0.19 0.0865 0.703 cMono_IL1B L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.36e-02 -0.12 0.0669 0.703 cMono_IL1B L2
ENSG00000139343 SNRPF 679252 sc-eQTL 5.13e-01 -0.0455 0.0694 0.703 cMono_IL1B L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 2.51e-02 -0.213 0.0946 0.703 cMono_IL1B L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 8.00e-02 0.156 0.0887 0.703 cMono_IL1B L2
ENSG00000059758 CDK17 137700 sc-eQTL 2.37e-01 -0.0995 0.0839 0.703 cMono_S100A L2
ENSG00000084110 HAL 541815 sc-eQTL 1.45e-01 0.138 0.094 0.703 cMono_S100A L2
ENSG00000111144 LTA4H 494660 sc-eQTL 1.91e-01 0.123 0.094 0.703 cMono_S100A L2
ENSG00000111145 ELK3 343805 sc-eQTL 4.68e-01 0.0559 0.0768 0.703 cMono_S100A L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.67e-01 -0.0553 0.0759 0.703 cMono_S100A L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 7.91e-01 -0.0272 0.103 0.703 cMono_S100A L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 5.30e-01 0.0607 0.0964 0.703 cMono_S100A L2
ENSG00000059758 CDK17 137700 sc-eQTL 2.89e-01 0.0888 0.0835 0.691 gdT L2
ENSG00000074527 NTN4 747028 sc-eQTL 8.00e-01 0.0244 0.0961 0.691 gdT L2
ENSG00000111144 LTA4H 494660 sc-eQTL 7.63e-01 0.0378 0.125 0.691 gdT L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.71e-01 -0.0658 0.116 0.691 gdT L2
ENSG00000139343 SNRPF 679252 sc-eQTL 4.32e-01 0.088 0.112 0.691 gdT L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 6.85e-01 0.0503 0.124 0.691 gdT L2
ENSG00000188596 CFAP54 48609 sc-eQTL 1.23e-01 0.167 0.107 0.691 gdT L2
ENSG00000059758 CDK17 137700 sc-eQTL 1.32e-01 -0.142 0.0936 0.698 intMono L2
ENSG00000084110 HAL 541815 sc-eQTL 1.38e-01 0.141 0.0947 0.698 intMono L2
ENSG00000111144 LTA4H 494660 sc-eQTL 4.07e-01 0.0809 0.0975 0.698 intMono L2
ENSG00000111145 ELK3 343805 sc-eQTL 4.91e-01 0.0599 0.0869 0.698 intMono L2
ENSG00000139343 SNRPF 679252 sc-eQTL 5.07e-01 -0.0618 0.0929 0.698 intMono L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.76e-01 -0.0856 0.0964 0.698 intMono L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 4.26e-01 0.0775 0.097 0.698 intMono L2
ENSG00000059758 CDK17 137700 sc-eQTL 5.67e-01 0.0431 0.0752 0.692 ncMono L2
ENSG00000084110 HAL 541815 sc-eQTL 3.16e-01 -0.0842 0.0838 0.692 ncMono L2
ENSG00000111144 LTA4H 494660 sc-eQTL 4.86e-01 0.0652 0.0936 0.692 ncMono L2
ENSG00000111145 ELK3 343805 sc-eQTL 7.71e-01 0.0235 0.0804 0.692 ncMono L2
ENSG00000139343 SNRPF 679252 sc-eQTL 8.71e-01 -0.0134 0.0821 0.692 ncMono L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 9.93e-01 0.00076 0.0872 0.692 ncMono L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 5.77e-01 0.0556 0.0995 0.692 ncMono L2
ENSG00000059758 CDK17 137700 sc-eQTL 2.86e-01 -0.105 0.0978 0.695 pDC L2
ENSG00000084110 HAL 541815 sc-eQTL 5.92e-01 0.0445 0.0829 0.695 pDC L2
ENSG00000111144 LTA4H 494660 sc-eQTL 1.12e-01 0.147 0.0921 0.695 pDC L2
ENSG00000111145 ELK3 343805 sc-eQTL 5.17e-01 -0.0737 0.113 0.695 pDC L2
ENSG00000139343 SNRPF 679252 sc-eQTL 7.09e-01 0.037 0.099 0.695 pDC L2
ENSG00000139350 NEDD1 -369043 sc-eQTL 4.44e-01 -0.0837 0.109 0.695 pDC L2
ENSG00000257715 AC007298.1 512857 sc-eQTL 6.24e-01 0.046 0.0937 0.695 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 137700 sc-eQTL 2.62e-01 0.0749 0.0666 0.703 B_Memory LOneK1K
ENSG00000111144 LTA4H 494660 sc-eQTL 2.82e-01 0.0747 0.0692 0.703 B_Memory LOneK1K
ENSG00000111145 ELK3 343805 sc-eQTL 4.11e-01 -0.0653 0.0792 0.703 B_Memory LOneK1K
ENSG00000136014 USP44 986704 sc-eQTL 8.09e-04 -0.327 0.0963 0.703 B_Memory LOneK1K
ENSG00000139343 SNRPF 679252 sc-eQTL 7.34e-01 -0.0262 0.0769 0.703 B_Memory LOneK1K
ENSG00000139350 NEDD1 -369043 sc-eQTL 1.52e-01 0.144 0.1 0.703 B_Memory LOneK1K
ENSG00000059758 CDK17 137700 sc-eQTL 8.12e-01 -0.0136 0.0572 0.703 B_Naive LOneK1K
ENSG00000111144 LTA4H 494660 sc-eQTL 1.10e-01 0.103 0.0638 0.703 B_Naive LOneK1K
ENSG00000111145 ELK3 343805 sc-eQTL 8.14e-01 -0.0172 0.0731 0.703 B_Naive LOneK1K
ENSG00000136014 USP44 986704 sc-eQTL 4.61e-02 -0.178 0.0885 0.703 B_Naive LOneK1K
ENSG00000139343 SNRPF 679252 sc-eQTL 1.65e-01 0.102 0.0733 0.703 B_Naive LOneK1K
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.54e-02 -0.204 0.0964 0.703 B_Naive LOneK1K
ENSG00000059758 CDK17 137700 sc-eQTL 6.40e-02 -0.124 0.0665 0.703 CD14_Mono LOneK1K
ENSG00000084110 HAL 541815 sc-eQTL 7.37e-01 0.0273 0.0811 0.703 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 494660 sc-eQTL 6.87e-02 0.162 0.0884 0.703 CD14_Mono LOneK1K
ENSG00000111145 ELK3 343805 sc-eQTL 5.57e-01 -0.0378 0.0643 0.703 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 679252 sc-eQTL 4.92e-01 -0.0427 0.062 0.703 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -369043 sc-eQTL 1.39e-01 -0.144 0.0969 0.703 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 512857 sc-eQTL 1.33e-01 0.135 0.0898 0.703 CD14_Mono LOneK1K
ENSG00000059758 CDK17 137700 sc-eQTL 4.51e-01 -0.0523 0.0694 0.703 CD16_Mono LOneK1K
ENSG00000084110 HAL 541815 sc-eQTL 9.84e-01 -0.00168 0.0821 0.703 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 494660 sc-eQTL 3.25e-01 0.0896 0.0908 0.703 CD16_Mono LOneK1K
ENSG00000111145 ELK3 343805 sc-eQTL 9.26e-01 -0.00622 0.0673 0.703 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 679252 sc-eQTL 4.73e-01 -0.0499 0.0694 0.703 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.42e-01 -0.0846 0.0889 0.703 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 512857 sc-eQTL 7.00e-01 0.0364 0.0942 0.703 CD16_Mono LOneK1K
ENSG00000059758 CDK17 137700 sc-eQTL 6.68e-02 0.0899 0.0488 0.705 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 494660 sc-eQTL 2.38e-01 -0.101 0.0853 0.705 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 343805 sc-eQTL 6.57e-01 -0.0348 0.0783 0.705 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 679252 sc-eQTL 8.43e-01 -0.0133 0.067 0.705 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -369043 sc-eQTL 3.91e-01 -0.0716 0.0834 0.705 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000059758 CDK17 137700 eQTL 4.53e-03 -0.0362 0.0127 0.00212 0.00108 0.297
ENSG00000139343 SNRPF 679252 eQTL 0.0396 0.0198 0.00963 0.0 0.0 0.297
ENSG00000139350 NEDD1 -369043 eQTL 3.38e-13 -0.185 0.0251 0.0 0.0 0.297
ENSG00000188596 CFAP54 48605 eQTL 0.000714 -0.0727 0.0214 0.0 0.0 0.297

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -369043 1.27e-06 8.5e-07 2.89e-07 3.19e-07 1.87e-07 3.12e-07 7.53e-07 3.45e-07 9.42e-07 3.13e-07 1.12e-06 5.81e-07 1.28e-06 2.12e-07 4.17e-07 5.69e-07 7.79e-07 5.33e-07 3.95e-07 3.99e-07 3.07e-07 7.58e-07 6.18e-07 4.66e-07 1.47e-06 3.02e-07 5.82e-07 4.59e-07 8.16e-07 9.11e-07 4.55e-07 3.77e-08 1.48e-07 3.78e-07 3.26e-07 3.21e-07 3.64e-07 1.5e-07 1.6e-07 2.99e-08 2.44e-07 9.5e-07 6.28e-08 1.29e-08 1.82e-07 5.38e-08 1.6e-07 8.57e-08 8.28e-08
ENSG00000188596 CFAP54 48605 8.39e-06 9.52e-06 1.76e-06 5.25e-06 2.38e-06 4.37e-06 1.09e-05 2.12e-06 9.51e-06 5.11e-06 1.2e-05 5.31e-06 1.46e-05 3.7e-06 2.98e-06 6.54e-06 4.52e-06 7.92e-06 3.04e-06 2.95e-06 6.03e-06 9.54e-06 8.51e-06 3.73e-06 1.38e-05 4.52e-06 5.21e-06 4.06e-06 1.15e-05 1.03e-05 5.45e-06 1.09e-06 1.27e-06 3.85e-06 4.58e-06 2.78e-06 1.7e-06 2e-06 2.11e-06 1.4e-06 1.67e-06 1.19e-05 1.48e-06 3.57e-07 1.41e-06 1.72e-06 1.82e-06 7.67e-07 6.34e-07