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Genes within 1Mb (chr12:96520859:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 120379 sc-eQTL 6.63e-01 0.02 0.0457 0.632 B L1
ENSG00000111144 LTA4H 477339 sc-eQTL 4.22e-01 0.0456 0.0567 0.632 B L1
ENSG00000111145 ELK3 326484 sc-eQTL 8.88e-01 -0.00852 0.0604 0.632 B L1
ENSG00000136014 USP44 969383 sc-eQTL 1.10e-02 -0.188 0.0734 0.632 B L1
ENSG00000139343 SNRPF 661931 sc-eQTL 3.45e-01 0.0518 0.0548 0.632 B L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 4.29e-02 -0.162 0.0794 0.632 B L1
ENSG00000059758 CDK17 120379 sc-eQTL 3.97e-01 -0.0317 0.0374 0.632 CD4T L1
ENSG00000111144 LTA4H 477339 sc-eQTL 6.04e-01 -0.0267 0.0514 0.632 CD4T L1
ENSG00000111145 ELK3 326484 sc-eQTL 4.98e-01 -0.0378 0.0556 0.632 CD4T L1
ENSG00000136014 USP44 969383 sc-eQTL 1.25e-01 0.122 0.079 0.632 CD4T L1
ENSG00000139343 SNRPF 661931 sc-eQTL 6.00e-01 -0.0256 0.0486 0.632 CD4T L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 8.96e-01 0.00784 0.0599 0.632 CD4T L1
ENSG00000059758 CDK17 120379 sc-eQTL 5.26e-01 -0.0246 0.0387 0.632 CD8T L1
ENSG00000111144 LTA4H 477339 sc-eQTL 5.89e-01 -0.0225 0.0415 0.632 CD8T L1
ENSG00000111145 ELK3 326484 sc-eQTL 7.28e-01 -0.0218 0.0625 0.632 CD8T L1
ENSG00000136014 USP44 969383 sc-eQTL 4.02e-01 0.0596 0.071 0.632 CD8T L1
ENSG00000139343 SNRPF 661931 sc-eQTL 3.61e-01 0.0468 0.0512 0.632 CD8T L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.11e-01 -0.0347 0.0681 0.632 CD8T L1
ENSG00000059758 CDK17 120379 sc-eQTL 8.40e-01 -0.0146 0.0718 0.626 DC L1
ENSG00000084110 HAL 524494 sc-eQTL 1.42e-01 -0.12 0.0813 0.626 DC L1
ENSG00000111144 LTA4H 477339 sc-eQTL 2.91e-01 0.0706 0.0667 0.626 DC L1
ENSG00000111145 ELK3 326484 sc-eQTL 1.20e-01 -0.127 0.0814 0.626 DC L1
ENSG00000139343 SNRPF 661931 sc-eQTL 5.00e-01 0.0459 0.068 0.626 DC L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 5.35e-01 -0.0542 0.0873 0.626 DC L1
ENSG00000257715 AC007298.1 495536 sc-eQTL 7.78e-01 -0.0223 0.0789 0.626 DC L1
ENSG00000059758 CDK17 120379 sc-eQTL 8.40e-01 -0.0117 0.0575 0.632 Mono L1
ENSG00000084110 HAL 524494 sc-eQTL 5.76e-01 -0.0405 0.0724 0.632 Mono L1
ENSG00000111144 LTA4H 477339 sc-eQTL 8.78e-01 0.0126 0.0818 0.632 Mono L1
ENSG00000111145 ELK3 326484 sc-eQTL 8.16e-01 -0.0128 0.0549 0.632 Mono L1
ENSG00000139343 SNRPF 661931 sc-eQTL 3.58e-01 -0.0476 0.0517 0.632 Mono L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.84e-01 -0.0324 0.0795 0.632 Mono L1
ENSG00000257715 AC007298.1 495536 sc-eQTL 9.25e-01 0.00725 0.077 0.632 Mono L1
ENSG00000059758 CDK17 120379 sc-eQTL 2.62e-02 0.0964 0.0431 0.633 NK L1
ENSG00000111144 LTA4H 477339 sc-eQTL 3.78e-01 -0.0652 0.0738 0.633 NK L1
ENSG00000111145 ELK3 326484 sc-eQTL 9.64e-01 0.00313 0.0702 0.633 NK L1
ENSG00000139343 SNRPF 661931 sc-eQTL 7.09e-01 -0.0217 0.0582 0.633 NK L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 8.34e-01 -0.0154 0.0736 0.633 NK L1
ENSG00000059758 CDK17 120379 sc-eQTL 5.55e-02 0.0699 0.0363 0.632 Other_T L1
ENSG00000074527 NTN4 729707 sc-eQTL 2.86e-01 -0.0722 0.0675 0.632 Other_T L1
ENSG00000111144 LTA4H 477339 sc-eQTL 3.95e-01 -0.0651 0.0764 0.632 Other_T L1
ENSG00000111145 ELK3 326484 sc-eQTL 3.31e-01 -0.058 0.0596 0.632 Other_T L1
ENSG00000139343 SNRPF 661931 sc-eQTL 8.50e-01 0.0105 0.0555 0.632 Other_T L1
ENSG00000139350 NEDD1 -386364 sc-eQTL 4.67e-01 -0.0615 0.0844 0.632 Other_T L1
ENSG00000188596 CFAP54 31288 sc-eQTL 9.12e-01 -0.00967 0.0875 0.632 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 120379 sc-eQTL 8.16e-01 0.0197 0.0845 0.63 B_Activated L2
ENSG00000111144 LTA4H 477339 sc-eQTL 2.53e-01 0.109 0.0954 0.63 B_Activated L2
ENSG00000111145 ELK3 326484 sc-eQTL 2.70e-01 0.112 0.101 0.63 B_Activated L2
ENSG00000136014 USP44 969383 sc-eQTL 1.41e-01 0.114 0.0774 0.63 B_Activated L2
ENSG00000139343 SNRPF 661931 sc-eQTL 2.52e-01 0.109 0.0952 0.63 B_Activated L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 2.66e-01 -0.111 0.0996 0.63 B_Activated L2
ENSG00000059758 CDK17 120379 sc-eQTL 3.04e-01 0.0731 0.071 0.631 B_Intermediate L2
ENSG00000111144 LTA4H 477339 sc-eQTL 5.62e-01 0.04 0.0689 0.631 B_Intermediate L2
ENSG00000111145 ELK3 326484 sc-eQTL 7.23e-02 -0.139 0.0771 0.631 B_Intermediate L2
ENSG00000136014 USP44 969383 sc-eQTL 2.74e-02 -0.201 0.0906 0.631 B_Intermediate L2
ENSG00000139343 SNRPF 661931 sc-eQTL 2.43e-01 -0.0903 0.0772 0.631 B_Intermediate L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 8.06e-01 0.0223 0.0907 0.631 B_Intermediate L2
ENSG00000059758 CDK17 120379 sc-eQTL 7.86e-01 0.0191 0.0702 0.636 B_Memory L2
ENSG00000111144 LTA4H 477339 sc-eQTL 8.50e-01 -0.0153 0.081 0.636 B_Memory L2
ENSG00000111145 ELK3 326484 sc-eQTL 4.73e-01 0.0572 0.0796 0.636 B_Memory L2
ENSG00000136014 USP44 969383 sc-eQTL 1.46e-01 -0.127 0.087 0.636 B_Memory L2
ENSG00000139343 SNRPF 661931 sc-eQTL 4.81e-01 -0.0596 0.0843 0.636 B_Memory L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 2.00e-01 0.12 0.093 0.636 B_Memory L2
ENSG00000059758 CDK17 120379 sc-eQTL 9.03e-01 -0.00702 0.0573 0.632 B_Naive1 L2
ENSG00000111144 LTA4H 477339 sc-eQTL 9.85e-01 -0.00116 0.06 0.632 B_Naive1 L2
ENSG00000111145 ELK3 326484 sc-eQTL 1.99e-01 0.0909 0.0706 0.632 B_Naive1 L2
ENSG00000136014 USP44 969383 sc-eQTL 2.47e-02 -0.199 0.0881 0.632 B_Naive1 L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.35e-02 0.169 0.068 0.632 B_Naive1 L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 9.03e-01 0.0108 0.0884 0.632 B_Naive1 L2
ENSG00000059758 CDK17 120379 sc-eQTL 5.28e-01 0.0461 0.0729 0.633 B_Naive2 L2
ENSG00000111144 LTA4H 477339 sc-eQTL 9.82e-01 -0.00155 0.0692 0.633 B_Naive2 L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.68e-01 -0.0734 0.0814 0.633 B_Naive2 L2
ENSG00000136014 USP44 969383 sc-eQTL 8.32e-01 -0.0188 0.0881 0.633 B_Naive2 L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.30e-01 0.122 0.0805 0.633 B_Naive2 L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 8.08e-03 -0.253 0.0947 0.633 B_Naive2 L2
ENSG00000059758 CDK17 120379 sc-eQTL 6.69e-01 0.0284 0.0663 0.639 CD4_CTL L2
ENSG00000111144 LTA4H 477339 sc-eQTL 6.87e-03 -0.251 0.0918 0.639 CD4_CTL L2
ENSG00000111145 ELK3 326484 sc-eQTL 9.27e-01 0.00871 0.0947 0.639 CD4_CTL L2
ENSG00000136014 USP44 969383 sc-eQTL 9.29e-01 0.0067 0.0756 0.639 CD4_CTL L2
ENSG00000139343 SNRPF 661931 sc-eQTL 6.10e-01 -0.042 0.0822 0.639 CD4_CTL L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 4.20e-01 -0.0768 0.095 0.639 CD4_CTL L2
ENSG00000059758 CDK17 120379 sc-eQTL 3.55e-01 -0.0379 0.0409 0.632 CD4_Naive L2
ENSG00000111144 LTA4H 477339 sc-eQTL 2.27e-01 -0.0716 0.0591 0.632 CD4_Naive L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.60e-01 -0.0544 0.0592 0.632 CD4_Naive L2
ENSG00000136014 USP44 969383 sc-eQTL 5.64e-02 0.158 0.0824 0.632 CD4_Naive L2
ENSG00000139343 SNRPF 661931 sc-eQTL 8.47e-01 -0.0102 0.0527 0.632 CD4_Naive L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 5.56e-01 -0.0383 0.0649 0.632 CD4_Naive L2
ENSG00000059758 CDK17 120379 sc-eQTL 4.68e-01 -0.0292 0.0402 0.632 CD4_TCM L2
ENSG00000111144 LTA4H 477339 sc-eQTL 4.12e-01 -0.056 0.0681 0.632 CD4_TCM L2
ENSG00000111145 ELK3 326484 sc-eQTL 8.03e-01 -0.0168 0.0671 0.632 CD4_TCM L2
ENSG00000136014 USP44 969383 sc-eQTL 5.25e-01 0.059 0.0927 0.632 CD4_TCM L2
ENSG00000139343 SNRPF 661931 sc-eQTL 5.94e-01 -0.0294 0.055 0.632 CD4_TCM L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 3.76e-01 0.0666 0.0751 0.632 CD4_TCM L2
ENSG00000059758 CDK17 120379 sc-eQTL 1.68e-01 0.068 0.0492 0.632 CD4_TEM L2
ENSG00000111144 LTA4H 477339 sc-eQTL 3.16e-01 0.0764 0.0761 0.632 CD4_TEM L2
ENSG00000111145 ELK3 326484 sc-eQTL 8.50e-01 0.0134 0.0709 0.632 CD4_TEM L2
ENSG00000136014 USP44 969383 sc-eQTL 3.43e-01 0.0828 0.087 0.632 CD4_TEM L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.16e-01 -0.116 0.0738 0.632 CD4_TEM L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.91e-01 0.035 0.088 0.632 CD4_TEM L2
ENSG00000059758 CDK17 120379 sc-eQTL 6.40e-02 0.0892 0.0479 0.632 CD8_CTL L2
ENSG00000111144 LTA4H 477339 sc-eQTL 4.68e-01 0.0634 0.0871 0.632 CD8_CTL L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.79e-01 0.0699 0.0792 0.632 CD8_CTL L2
ENSG00000136014 USP44 969383 sc-eQTL 7.11e-01 0.0328 0.0884 0.632 CD8_CTL L2
ENSG00000139343 SNRPF 661931 sc-eQTL 8.29e-01 0.0158 0.073 0.632 CD8_CTL L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 1.91e-01 -0.107 0.0815 0.632 CD8_CTL L2
ENSG00000059758 CDK17 120379 sc-eQTL 4.14e-01 -0.0476 0.0582 0.632 CD8_Naive L2
ENSG00000111144 LTA4H 477339 sc-eQTL 5.43e-01 -0.0425 0.0698 0.632 CD8_Naive L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.24e-01 -0.0729 0.0737 0.632 CD8_Naive L2
ENSG00000136014 USP44 969383 sc-eQTL 6.88e-01 0.0312 0.0776 0.632 CD8_Naive L2
ENSG00000139343 SNRPF 661931 sc-eQTL 2.87e-01 0.0708 0.0663 0.632 CD8_Naive L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.49e-01 0.0361 0.079 0.632 CD8_Naive L2
ENSG00000059758 CDK17 120379 sc-eQTL 5.52e-01 0.0374 0.0627 0.623 CD8_TCM L2
ENSG00000111144 LTA4H 477339 sc-eQTL 8.14e-02 -0.16 0.0916 0.623 CD8_TCM L2
ENSG00000111145 ELK3 326484 sc-eQTL 4.01e-01 0.0657 0.078 0.623 CD8_TCM L2
ENSG00000136014 USP44 969383 sc-eQTL 9.35e-01 -0.00692 0.0846 0.623 CD8_TCM L2
ENSG00000139343 SNRPF 661931 sc-eQTL 2.76e-01 0.098 0.0897 0.623 CD8_TCM L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 3.79e-01 -0.0775 0.088 0.623 CD8_TCM L2
ENSG00000059758 CDK17 120379 sc-eQTL 6.86e-01 -0.0323 0.0798 0.63 CD8_TEM L2
ENSG00000111144 LTA4H 477339 sc-eQTL 9.86e-01 -0.00173 0.0977 0.63 CD8_TEM L2
ENSG00000111145 ELK3 326484 sc-eQTL 9.04e-01 -0.0116 0.0961 0.63 CD8_TEM L2
ENSG00000136014 USP44 969383 sc-eQTL 8.96e-01 -0.0107 0.0818 0.63 CD8_TEM L2
ENSG00000139343 SNRPF 661931 sc-eQTL 6.64e-01 -0.0388 0.0893 0.63 CD8_TEM L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 7.66e-01 -0.0288 0.0969 0.63 CD8_TEM L2
ENSG00000059758 CDK17 120379 sc-eQTL 7.96e-01 -0.0135 0.0523 0.632 MAIT L2
ENSG00000074527 NTN4 729707 sc-eQTL 6.28e-01 -0.0342 0.0705 0.632 MAIT L2
ENSG00000111144 LTA4H 477339 sc-eQTL 8.90e-02 -0.137 0.0802 0.632 MAIT L2
ENSG00000111145 ELK3 326484 sc-eQTL 5.13e-01 -0.0444 0.0677 0.632 MAIT L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.58e-01 -0.111 0.0782 0.632 MAIT L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 9.05e-01 0.0105 0.0882 0.632 MAIT L2
ENSG00000188596 CFAP54 31288 sc-eQTL 3.23e-01 -0.0864 0.0872 0.632 MAIT L2
ENSG00000059758 CDK17 120379 sc-eQTL 2.15e-02 0.129 0.0555 0.629 NK_CD56bright L2
ENSG00000111144 LTA4H 477339 sc-eQTL 6.20e-01 -0.0413 0.0832 0.629 NK_CD56bright L2
ENSG00000111145 ELK3 326484 sc-eQTL 5.98e-01 -0.0466 0.0882 0.629 NK_CD56bright L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.39e-01 0.137 0.0919 0.629 NK_CD56bright L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 1.17e-01 0.146 0.0926 0.629 NK_CD56bright L2
ENSG00000059758 CDK17 120379 sc-eQTL 9.52e-02 0.0781 0.0466 0.636 NK_CD56dim L2
ENSG00000111144 LTA4H 477339 sc-eQTL 7.78e-01 0.0239 0.0847 0.636 NK_CD56dim L2
ENSG00000111145 ELK3 326484 sc-eQTL 5.66e-01 0.0431 0.075 0.636 NK_CD56dim L2
ENSG00000139343 SNRPF 661931 sc-eQTL 8.09e-02 -0.124 0.0709 0.636 NK_CD56dim L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.53e-01 -0.037 0.0822 0.636 NK_CD56dim L2
ENSG00000059758 CDK17 120379 sc-eQTL 6.05e-01 0.0388 0.0748 0.637 NK_HLA L2
ENSG00000111144 LTA4H 477339 sc-eQTL 2.68e-01 -0.109 0.0978 0.637 NK_HLA L2
ENSG00000111145 ELK3 326484 sc-eQTL 4.85e-01 -0.0636 0.0909 0.637 NK_HLA L2
ENSG00000139343 SNRPF 661931 sc-eQTL 2.62e-01 0.106 0.0946 0.637 NK_HLA L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 9.68e-01 0.0036 0.0898 0.637 NK_HLA L2
ENSG00000059758 CDK17 120379 sc-eQTL 7.14e-02 0.093 0.0513 0.636 NK_cytokine L2
ENSG00000111144 LTA4H 477339 sc-eQTL 4.99e-01 -0.0591 0.0874 0.636 NK_cytokine L2
ENSG00000111145 ELK3 326484 sc-eQTL 8.64e-01 -0.0144 0.0838 0.636 NK_cytokine L2
ENSG00000139343 SNRPF 661931 sc-eQTL 7.61e-01 0.0216 0.0709 0.636 NK_cytokine L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 5.75e-01 0.0493 0.0877 0.636 NK_cytokine L2
ENSG00000059758 CDK17 120379 sc-eQTL 8.23e-01 -0.0221 0.0981 0.641 PB L2
ENSG00000111144 LTA4H 477339 sc-eQTL 3.16e-01 -0.0868 0.0862 0.641 PB L2
ENSG00000111145 ELK3 326484 sc-eQTL 9.16e-01 -0.0117 0.111 0.641 PB L2
ENSG00000136014 USP44 969383 sc-eQTL 2.66e-01 0.114 0.102 0.641 PB L2
ENSG00000139343 SNRPF 661931 sc-eQTL 3.81e-01 -0.095 0.108 0.641 PB L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.49e-01 -0.0586 0.129 0.641 PB L2
ENSG00000059758 CDK17 120379 sc-eQTL 8.59e-01 0.0102 0.0572 0.628 Pro_T L2
ENSG00000074527 NTN4 729707 sc-eQTL 7.73e-02 -0.113 0.0637 0.628 Pro_T L2
ENSG00000111144 LTA4H 477339 sc-eQTL 9.04e-01 0.00912 0.0755 0.628 Pro_T L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.74e-01 -0.0812 0.0911 0.628 Pro_T L2
ENSG00000139343 SNRPF 661931 sc-eQTL 7.15e-01 -0.021 0.0576 0.628 Pro_T L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 3.69e-01 0.0751 0.0835 0.628 Pro_T L2
ENSG00000188596 CFAP54 31288 sc-eQTL 6.47e-01 0.031 0.0676 0.628 Pro_T L2
ENSG00000059758 CDK17 120379 sc-eQTL 7.82e-01 -0.0173 0.0625 0.632 Treg L2
ENSG00000111144 LTA4H 477339 sc-eQTL 8.86e-01 0.0114 0.0792 0.632 Treg L2
ENSG00000111145 ELK3 326484 sc-eQTL 5.48e-01 -0.0431 0.0717 0.632 Treg L2
ENSG00000136014 USP44 969383 sc-eQTL 4.29e-01 0.0638 0.0804 0.632 Treg L2
ENSG00000139343 SNRPF 661931 sc-eQTL 1.43e-01 0.122 0.0826 0.632 Treg L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 3.17e-01 0.0928 0.0925 0.632 Treg L2
ENSG00000059758 CDK17 120379 sc-eQTL 3.16e-01 0.0773 0.0768 0.624 cDC L2
ENSG00000084110 HAL 524494 sc-eQTL 3.76e-01 -0.0708 0.0799 0.624 cDC L2
ENSG00000111144 LTA4H 477339 sc-eQTL 1.27e-01 0.105 0.0682 0.624 cDC L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.73e-02 -0.188 0.0895 0.624 cDC L2
ENSG00000139343 SNRPF 661931 sc-eQTL 3.10e-01 0.077 0.0756 0.624 cDC L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 7.97e-01 -0.0238 0.0924 0.624 cDC L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 9.06e-01 0.00921 0.0779 0.624 cDC L2
ENSG00000059758 CDK17 120379 sc-eQTL 4.02e-01 -0.0559 0.0665 0.632 cMono_IL1B L2
ENSG00000084110 HAL 524494 sc-eQTL 3.27e-01 -0.0712 0.0724 0.632 cMono_IL1B L2
ENSG00000111144 LTA4H 477339 sc-eQTL 6.65e-01 0.034 0.0784 0.632 cMono_IL1B L2
ENSG00000111145 ELK3 326484 sc-eQTL 1.05e-01 -0.0978 0.0601 0.632 cMono_IL1B L2
ENSG00000139343 SNRPF 661931 sc-eQTL 4.52e-01 -0.0469 0.0623 0.632 cMono_IL1B L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 1.75e-01 -0.116 0.0855 0.632 cMono_IL1B L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 6.93e-01 0.0316 0.0801 0.632 cMono_IL1B L2
ENSG00000059758 CDK17 120379 sc-eQTL 4.59e-01 -0.0561 0.0756 0.632 cMono_S100A L2
ENSG00000084110 HAL 524494 sc-eQTL 4.72e-01 0.0611 0.0848 0.632 cMono_S100A L2
ENSG00000111144 LTA4H 477339 sc-eQTL 9.75e-01 -0.00271 0.0848 0.632 cMono_S100A L2
ENSG00000111145 ELK3 326484 sc-eQTL 3.11e-01 0.07 0.0689 0.632 cMono_S100A L2
ENSG00000139343 SNRPF 661931 sc-eQTL 8.00e-01 -0.0173 0.0683 0.632 cMono_S100A L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.99e-01 0.0357 0.0921 0.632 cMono_S100A L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 8.95e-01 -0.0114 0.0868 0.632 cMono_S100A L2
ENSG00000059758 CDK17 120379 sc-eQTL 3.88e-01 0.0638 0.0737 0.621 gdT L2
ENSG00000074527 NTN4 729707 sc-eQTL 7.87e-01 0.023 0.0848 0.621 gdT L2
ENSG00000111144 LTA4H 477339 sc-eQTL 7.92e-01 -0.0292 0.111 0.621 gdT L2
ENSG00000111145 ELK3 326484 sc-eQTL 5.04e-01 -0.0685 0.102 0.621 gdT L2
ENSG00000139343 SNRPF 661931 sc-eQTL 9.89e-01 0.0014 0.0988 0.621 gdT L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 3.17e-01 -0.109 0.109 0.621 gdT L2
ENSG00000188596 CFAP54 31288 sc-eQTL 2.21e-01 0.117 0.0951 0.621 gdT L2
ENSG00000059758 CDK17 120379 sc-eQTL 1.91e-01 -0.11 0.0836 0.624 intMono L2
ENSG00000084110 HAL 524494 sc-eQTL 5.14e-01 0.0555 0.0848 0.624 intMono L2
ENSG00000111144 LTA4H 477339 sc-eQTL 7.45e-01 -0.0283 0.087 0.624 intMono L2
ENSG00000111145 ELK3 326484 sc-eQTL 2.36e-01 0.0918 0.0773 0.624 intMono L2
ENSG00000139343 SNRPF 661931 sc-eQTL 3.13e-01 -0.0836 0.0827 0.624 intMono L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.98e-01 -0.0334 0.0861 0.624 intMono L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 4.89e-01 0.06 0.0865 0.624 intMono L2
ENSG00000059758 CDK17 120379 sc-eQTL 4.75e-01 0.0481 0.0672 0.622 ncMono L2
ENSG00000084110 HAL 524494 sc-eQTL 2.64e-01 -0.084 0.0749 0.622 ncMono L2
ENSG00000111144 LTA4H 477339 sc-eQTL 4.41e-01 -0.0646 0.0837 0.622 ncMono L2
ENSG00000111145 ELK3 326484 sc-eQTL 2.61e-01 0.0808 0.0717 0.622 ncMono L2
ENSG00000139343 SNRPF 661931 sc-eQTL 3.06e-01 -0.0752 0.0733 0.622 ncMono L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 6.39e-01 0.0367 0.078 0.622 ncMono L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 4.74e-01 -0.0638 0.089 0.622 ncMono L2
ENSG00000059758 CDK17 120379 sc-eQTL 3.77e-01 -0.0781 0.0883 0.63 pDC L2
ENSG00000084110 HAL 524494 sc-eQTL 7.21e-01 -0.0268 0.0747 0.63 pDC L2
ENSG00000111144 LTA4H 477339 sc-eQTL 8.97e-02 0.142 0.0829 0.63 pDC L2
ENSG00000111145 ELK3 326484 sc-eQTL 6.88e-01 -0.0411 0.102 0.63 pDC L2
ENSG00000139343 SNRPF 661931 sc-eQTL 8.05e-01 -0.0221 0.0893 0.63 pDC L2
ENSG00000139350 NEDD1 -386364 sc-eQTL 5.50e-01 -0.059 0.0984 0.63 pDC L2
ENSG00000257715 AC007298.1 495536 sc-eQTL 6.03e-01 0.0439 0.0844 0.63 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 120379 sc-eQTL 3.41e-01 0.0571 0.0597 0.632 B_Memory LOneK1K
ENSG00000111144 LTA4H 477339 sc-eQTL 7.20e-01 0.0223 0.0621 0.632 B_Memory LOneK1K
ENSG00000111145 ELK3 326484 sc-eQTL 4.46e-01 -0.0542 0.0709 0.632 B_Memory LOneK1K
ENSG00000136014 USP44 969383 sc-eQTL 2.09e-02 -0.203 0.0874 0.632 B_Memory LOneK1K
ENSG00000139343 SNRPF 661931 sc-eQTL 4.26e-01 -0.0549 0.0687 0.632 B_Memory LOneK1K
ENSG00000139350 NEDD1 -386364 sc-eQTL 4.71e-01 0.0651 0.0902 0.632 B_Memory LOneK1K
ENSG00000059758 CDK17 120379 sc-eQTL 8.55e-01 0.00935 0.0512 0.632 B_Naive LOneK1K
ENSG00000111144 LTA4H 477339 sc-eQTL 6.12e-01 0.0292 0.0575 0.632 B_Naive LOneK1K
ENSG00000111145 ELK3 326484 sc-eQTL 9.81e-01 -0.00158 0.0655 0.632 B_Naive LOneK1K
ENSG00000136014 USP44 969383 sc-eQTL 6.42e-02 -0.148 0.0794 0.632 B_Naive LOneK1K
ENSG00000139343 SNRPF 661931 sc-eQTL 4.22e-02 0.133 0.0653 0.632 B_Naive LOneK1K
ENSG00000139350 NEDD1 -386364 sc-eQTL 1.13e-01 -0.138 0.0867 0.632 B_Naive LOneK1K
ENSG00000059758 CDK17 120379 sc-eQTL 3.54e-01 -0.0556 0.0599 0.632 CD14_Mono LOneK1K
ENSG00000084110 HAL 524494 sc-eQTL 6.58e-01 -0.0322 0.0726 0.632 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 477339 sc-eQTL 8.12e-01 0.019 0.0798 0.632 CD14_Mono LOneK1K
ENSG00000111145 ELK3 326484 sc-eQTL 7.83e-01 -0.0159 0.0576 0.632 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 661931 sc-eQTL 4.53e-01 -0.0418 0.0555 0.632 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -386364 sc-eQTL 4.80e-01 -0.0617 0.0871 0.632 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 495536 sc-eQTL 8.77e-01 0.0125 0.0808 0.632 CD14_Mono LOneK1K
ENSG00000059758 CDK17 120379 sc-eQTL 5.78e-01 -0.0344 0.0618 0.631 CD16_Mono LOneK1K
ENSG00000084110 HAL 524494 sc-eQTL 6.56e-01 -0.0325 0.073 0.631 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 477339 sc-eQTL 6.19e-01 -0.0403 0.081 0.631 CD16_Mono LOneK1K
ENSG00000111145 ELK3 326484 sc-eQTL 5.69e-01 0.0341 0.0599 0.631 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 661931 sc-eQTL 1.50e-01 -0.0889 0.0615 0.631 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -386364 sc-eQTL 9.14e-01 -0.00856 0.0793 0.631 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 495536 sc-eQTL 7.06e-01 -0.0317 0.0839 0.631 CD16_Mono LOneK1K
ENSG00000059758 CDK17 120379 sc-eQTL 8.15e-02 0.0766 0.0438 0.636 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 477339 sc-eQTL 4.55e-01 -0.0573 0.0766 0.636 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 326484 sc-eQTL 9.57e-01 0.00375 0.0702 0.636 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 661931 sc-eQTL 3.02e-01 -0.0619 0.0599 0.636 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -386364 sc-eQTL 8.45e-01 -0.0147 0.0749 0.636 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139343 SNRPF 661931 eQTL 0.0277 0.0204 0.00927 0.00108 0.0 0.362
ENSG00000139350 NEDD1 -386364 eQTL 1.55e-05 -0.107 0.0246 0.0 0.0 0.362
ENSG00000188596 CFAP54 31284 eQTL 0.00168 -0.0651 0.0207 0.0 0.0 0.362

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -386364 1.27e-06 9.07e-07 2.89e-07 3.25e-07 1.87e-07 3.22e-07 7.99e-07 3.02e-07 1.08e-06 3.09e-07 1.13e-06 5.73e-07 1.37e-06 2.08e-07 4.43e-07 5.75e-07 7.62e-07 5.27e-07 3.98e-07 4.19e-07 2.89e-07 7.73e-07 6.1e-07 4.79e-07 1.54e-06 2.9e-07 5.83e-07 4.94e-07 8.24e-07 9.25e-07 4.61e-07 3.72e-08 1.21e-07 3.58e-07 3.24e-07 2.99e-07 2.79e-07 1.32e-07 1.55e-07 3.01e-08 2.38e-07 1.05e-06 6.75e-08 5.77e-09 1.84e-07 5.94e-08 1.7e-07 8.25e-08 5.77e-08
ENSG00000188596 CFAP54 31284 1.31e-05 1.28e-05 2.86e-06 8.58e-06 3.02e-06 6.64e-06 1.98e-05 2.9e-06 1.41e-05 6.93e-06 1.78e-05 6.86e-06 2.5e-05 5.21e-06 4.47e-06 9.06e-06 8.03e-06 1.24e-05 4.67e-06 4.28e-06 7.79e-06 1.35e-05 1.42e-05 5.93e-06 2.43e-05 5.26e-06 7.65e-06 6.08e-06 1.66e-05 1.7e-05 8.79e-06 1.38e-06 1.88e-06 5.59e-06 6.38e-06 4.16e-06 2.42e-06 2.71e-06 3.61e-06 2.66e-06 1.76e-06 1.71e-05 2.34e-06 4.43e-07 2e-06 2.59e-06 2.95e-06 1.35e-06 1.23e-06
ENSG00000257715 \N 495536 8.63e-07 4.97e-07 1.29e-07 3.48e-07 1.05e-07 2.01e-07 5.31e-07 1.48e-07 4.74e-07 2.37e-07 6.56e-07 3.84e-07 7.36e-07 1.23e-07 2.35e-07 2.69e-07 3.35e-07 3.95e-07 2.13e-07 1.55e-07 2.01e-07 3.8e-07 3.7e-07 1.71e-07 7.42e-07 2.6e-07 2.72e-07 2.65e-07 3.88e-07 5.17e-07 2.73e-07 6.13e-08 5.19e-08 1.5e-07 3e-07 1.02e-07 1.18e-07 7.64e-08 6.38e-08 2.59e-08 8.75e-08 4.68e-07 2.92e-08 1.71e-08 1.27e-07 1.61e-08 1.21e-07 1.17e-08 4.71e-08