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Genes within 1Mb (chr12:96518820:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 118340 sc-eQTL 1.18e-01 -0.0852 0.0542 0.778 B L1
ENSG00000111144 LTA4H 475300 sc-eQTL 2.24e-01 0.0822 0.0675 0.778 B L1
ENSG00000111145 ELK3 324445 sc-eQTL 3.66e-01 -0.0652 0.0719 0.778 B L1
ENSG00000136014 USP44 967344 sc-eQTL 2.50e-02 -0.198 0.0878 0.778 B L1
ENSG00000139343 SNRPF 659892 sc-eQTL 8.10e-01 -0.0157 0.0655 0.778 B L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.06e-01 -0.154 0.095 0.778 B L1
ENSG00000059758 CDK17 118340 sc-eQTL 5.44e-02 -0.0852 0.0441 0.778 CD4T L1
ENSG00000111144 LTA4H 475300 sc-eQTL 6.93e-01 -0.0241 0.061 0.778 CD4T L1
ENSG00000111145 ELK3 324445 sc-eQTL 7.19e-01 0.0238 0.0661 0.778 CD4T L1
ENSG00000136014 USP44 967344 sc-eQTL 1.67e-01 0.13 0.0939 0.778 CD4T L1
ENSG00000139343 SNRPF 659892 sc-eQTL 2.71e-01 -0.0636 0.0576 0.778 CD4T L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 3.13e-01 0.0719 0.071 0.778 CD4T L1
ENSG00000059758 CDK17 118340 sc-eQTL 2.76e-02 -0.101 0.0453 0.778 CD8T L1
ENSG00000111144 LTA4H 475300 sc-eQTL 7.95e-01 0.0128 0.0492 0.778 CD8T L1
ENSG00000111145 ELK3 324445 sc-eQTL 9.18e-01 -0.00765 0.0741 0.778 CD8T L1
ENSG00000136014 USP44 967344 sc-eQTL 4.17e-01 0.0684 0.0842 0.778 CD8T L1
ENSG00000139343 SNRPF 659892 sc-eQTL 3.13e-01 0.0613 0.0606 0.778 CD8T L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 7.95e-01 0.021 0.0807 0.778 CD8T L1
ENSG00000059758 CDK17 118340 sc-eQTL 1.36e-01 -0.129 0.0859 0.775 DC L1
ENSG00000084110 HAL 522455 sc-eQTL 5.95e-01 -0.0523 0.0982 0.775 DC L1
ENSG00000111144 LTA4H 475300 sc-eQTL 7.46e-01 0.026 0.0804 0.775 DC L1
ENSG00000111145 ELK3 324445 sc-eQTL 1.21e-01 -0.152 0.0978 0.775 DC L1
ENSG00000139343 SNRPF 659892 sc-eQTL 4.73e-01 0.0588 0.0818 0.775 DC L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 5.01e-01 -0.0707 0.105 0.775 DC L1
ENSG00000257715 AC007298.1 493497 sc-eQTL 1.99e-01 -0.122 0.0945 0.775 DC L1
ENSG00000059758 CDK17 118340 sc-eQTL 4.93e-01 -0.0469 0.0683 0.778 Mono L1
ENSG00000084110 HAL 522455 sc-eQTL 5.19e-01 -0.0556 0.0861 0.778 Mono L1
ENSG00000111144 LTA4H 475300 sc-eQTL 1.27e-01 0.148 0.0967 0.778 Mono L1
ENSG00000111145 ELK3 324445 sc-eQTL 5.45e-01 -0.0395 0.0653 0.778 Mono L1
ENSG00000139343 SNRPF 659892 sc-eQTL 9.54e-01 0.00359 0.0616 0.778 Mono L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.13e-02 -0.238 0.0931 0.778 Mono L1
ENSG00000257715 AC007298.1 493497 sc-eQTL 3.05e-01 0.0939 0.0914 0.778 Mono L1
ENSG00000059758 CDK17 118340 sc-eQTL 3.43e-01 0.0487 0.0513 0.777 NK L1
ENSG00000111144 LTA4H 475300 sc-eQTL 6.19e-01 -0.0435 0.0871 0.777 NK L1
ENSG00000111145 ELK3 324445 sc-eQTL 4.29e-01 -0.0654 0.0826 0.777 NK L1
ENSG00000139343 SNRPF 659892 sc-eQTL 8.90e-01 -0.00953 0.0686 0.777 NK L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.64e-01 -0.121 0.0864 0.777 NK L1
ENSG00000059758 CDK17 118340 sc-eQTL 4.85e-01 0.0305 0.0435 0.778 Other_T L1
ENSG00000074527 NTN4 727668 sc-eQTL 4.06e-01 -0.0669 0.0804 0.778 Other_T L1
ENSG00000111144 LTA4H 475300 sc-eQTL 9.65e-01 0.00399 0.0911 0.778 Other_T L1
ENSG00000111145 ELK3 324445 sc-eQTL 8.87e-01 -0.0101 0.0711 0.778 Other_T L1
ENSG00000139343 SNRPF 659892 sc-eQTL 8.83e-01 0.00973 0.066 0.778 Other_T L1
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.08e-01 -0.0832 0.1 0.778 Other_T L1
ENSG00000188596 CFAP54 29249 sc-eQTL 2.83e-01 0.112 0.104 0.778 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 118340 sc-eQTL 9.87e-01 0.00157 0.0975 0.77 B_Activated L2
ENSG00000111144 LTA4H 475300 sc-eQTL 3.04e-01 0.113 0.11 0.77 B_Activated L2
ENSG00000111145 ELK3 324445 sc-eQTL 3.00e-01 0.121 0.117 0.77 B_Activated L2
ENSG00000136014 USP44 967344 sc-eQTL 1.16e-01 0.141 0.0892 0.77 B_Activated L2
ENSG00000139343 SNRPF 659892 sc-eQTL 2.79e-01 0.119 0.11 0.77 B_Activated L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 5.76e-01 -0.0645 0.115 0.77 B_Activated L2
ENSG00000059758 CDK17 118340 sc-eQTL 5.67e-01 -0.0492 0.0859 0.777 B_Intermediate L2
ENSG00000111144 LTA4H 475300 sc-eQTL 8.86e-01 0.012 0.0832 0.777 B_Intermediate L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.77e-02 -0.165 0.0932 0.777 B_Intermediate L2
ENSG00000136014 USP44 967344 sc-eQTL 8.52e-03 -0.289 0.109 0.777 B_Intermediate L2
ENSG00000139343 SNRPF 659892 sc-eQTL 7.15e-01 -0.0341 0.0935 0.777 B_Intermediate L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 8.03e-01 -0.0273 0.11 0.777 B_Intermediate L2
ENSG00000059758 CDK17 118340 sc-eQTL 7.89e-01 -0.0224 0.0833 0.782 B_Memory L2
ENSG00000111144 LTA4H 475300 sc-eQTL 1.05e-01 -0.156 0.0956 0.782 B_Memory L2
ENSG00000111145 ELK3 324445 sc-eQTL 3.64e-01 0.0859 0.0944 0.782 B_Memory L2
ENSG00000136014 USP44 967344 sc-eQTL 5.42e-02 -0.199 0.103 0.782 B_Memory L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.76e-01 -0.0562 0.1 0.782 B_Memory L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.97e-02 0.217 0.11 0.782 B_Memory L2
ENSG00000059758 CDK17 118340 sc-eQTL 5.99e-02 -0.128 0.0676 0.778 B_Naive1 L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.54e-01 0.032 0.0713 0.778 B_Naive1 L2
ENSG00000111145 ELK3 324445 sc-eQTL 4.72e-01 -0.0608 0.0843 0.778 B_Naive1 L2
ENSG00000136014 USP44 967344 sc-eQTL 4.78e-01 -0.0753 0.106 0.778 B_Naive1 L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.45e-01 0.0497 0.082 0.778 B_Naive1 L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 6.95e-01 0.0414 0.105 0.778 B_Naive1 L2
ENSG00000059758 CDK17 118340 sc-eQTL 9.70e-01 0.00323 0.0866 0.779 B_Naive2 L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.52e-01 0.0371 0.082 0.779 B_Naive2 L2
ENSG00000111145 ELK3 324445 sc-eQTL 4.67e-01 -0.0704 0.0966 0.779 B_Naive2 L2
ENSG00000136014 USP44 967344 sc-eQTL 7.27e-01 -0.0365 0.104 0.779 B_Naive2 L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.85e-01 0.0525 0.0959 0.779 B_Naive2 L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.39e-02 -0.279 0.113 0.779 B_Naive2 L2
ENSG00000059758 CDK17 118340 sc-eQTL 4.62e-01 -0.0579 0.0785 0.78 CD4_CTL L2
ENSG00000111144 LTA4H 475300 sc-eQTL 3.09e-01 -0.113 0.111 0.78 CD4_CTL L2
ENSG00000111145 ELK3 324445 sc-eQTL 6.59e-01 0.0496 0.112 0.78 CD4_CTL L2
ENSG00000136014 USP44 967344 sc-eQTL 3.52e-01 0.0834 0.0894 0.78 CD4_CTL L2
ENSG00000139343 SNRPF 659892 sc-eQTL 6.95e-01 -0.0384 0.0976 0.78 CD4_CTL L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 3.42e-02 -0.238 0.112 0.78 CD4_CTL L2
ENSG00000059758 CDK17 118340 sc-eQTL 6.26e-02 -0.0906 0.0484 0.778 CD4_Naive L2
ENSG00000111144 LTA4H 475300 sc-eQTL 4.95e-01 -0.0482 0.0705 0.778 CD4_Naive L2
ENSG00000111145 ELK3 324445 sc-eQTL 9.26e-01 -0.00656 0.0706 0.778 CD4_Naive L2
ENSG00000136014 USP44 967344 sc-eQTL 1.31e-01 0.149 0.0984 0.778 CD4_Naive L2
ENSG00000139343 SNRPF 659892 sc-eQTL 3.38e-01 -0.0601 0.0626 0.778 CD4_Naive L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 8.10e-01 0.0186 0.0772 0.778 CD4_Naive L2
ENSG00000059758 CDK17 118340 sc-eQTL 1.17e-01 -0.0747 0.0474 0.778 CD4_TCM L2
ENSG00000111144 LTA4H 475300 sc-eQTL 5.52e-01 -0.0482 0.0808 0.778 CD4_TCM L2
ENSG00000111145 ELK3 324445 sc-eQTL 1.08e-01 0.128 0.0791 0.778 CD4_TCM L2
ENSG00000136014 USP44 967344 sc-eQTL 6.47e-01 0.0504 0.11 0.778 CD4_TCM L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.42e-01 -0.0399 0.0652 0.778 CD4_TCM L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 2.29e-01 0.107 0.0889 0.778 CD4_TCM L2
ENSG00000059758 CDK17 118340 sc-eQTL 7.63e-01 0.0177 0.0588 0.778 CD4_TEM L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.95e-01 0.0356 0.0907 0.778 CD4_TEM L2
ENSG00000111145 ELK3 324445 sc-eQTL 8.89e-01 0.0117 0.0843 0.778 CD4_TEM L2
ENSG00000136014 USP44 967344 sc-eQTL 6.19e-01 0.0516 0.104 0.778 CD4_TEM L2
ENSG00000139343 SNRPF 659892 sc-eQTL 1.01e-01 -0.144 0.0877 0.778 CD4_TEM L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 7.71e-01 -0.0305 0.105 0.778 CD4_TEM L2
ENSG00000059758 CDK17 118340 sc-eQTL 9.26e-01 0.00531 0.0571 0.778 CD8_CTL L2
ENSG00000111144 LTA4H 475300 sc-eQTL 4.08e-01 0.0854 0.103 0.778 CD8_CTL L2
ENSG00000111145 ELK3 324445 sc-eQTL 1.05e-01 0.152 0.0932 0.778 CD8_CTL L2
ENSG00000136014 USP44 967344 sc-eQTL 5.49e-01 0.0628 0.104 0.778 CD8_CTL L2
ENSG00000139343 SNRPF 659892 sc-eQTL 4.07e-01 0.0716 0.0861 0.778 CD8_CTL L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 2.88e-01 -0.103 0.0965 0.778 CD8_CTL L2
ENSG00000059758 CDK17 118340 sc-eQTL 6.88e-02 -0.125 0.0686 0.778 CD8_Naive L2
ENSG00000111144 LTA4H 475300 sc-eQTL 8.48e-01 0.0159 0.0828 0.778 CD8_Naive L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.07e-01 -0.0329 0.0876 0.778 CD8_Naive L2
ENSG00000136014 USP44 967344 sc-eQTL 4.18e-01 0.0745 0.0918 0.778 CD8_Naive L2
ENSG00000139343 SNRPF 659892 sc-eQTL 6.29e-01 0.038 0.0787 0.778 CD8_Naive L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 9.40e-02 0.157 0.0931 0.778 CD8_Naive L2
ENSG00000059758 CDK17 118340 sc-eQTL 6.37e-01 0.0345 0.073 0.773 CD8_TCM L2
ENSG00000111144 LTA4H 475300 sc-eQTL 1.04e-01 -0.174 0.107 0.773 CD8_TCM L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.60e-01 -0.0278 0.0909 0.773 CD8_TCM L2
ENSG00000136014 USP44 967344 sc-eQTL 5.91e-01 -0.053 0.0983 0.773 CD8_TCM L2
ENSG00000139343 SNRPF 659892 sc-eQTL 6.75e-01 0.044 0.105 0.773 CD8_TCM L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 7.69e-01 0.0301 0.102 0.773 CD8_TCM L2
ENSG00000059758 CDK17 118340 sc-eQTL 2.59e-01 -0.105 0.0928 0.779 CD8_TEM L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.88e-01 0.0459 0.114 0.779 CD8_TEM L2
ENSG00000111145 ELK3 324445 sc-eQTL 5.83e-01 0.0616 0.112 0.779 CD8_TEM L2
ENSG00000136014 USP44 967344 sc-eQTL 6.84e-01 -0.0389 0.0954 0.779 CD8_TEM L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.04e-01 0.0697 0.104 0.779 CD8_TEM L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 8.95e-01 0.0149 0.113 0.779 CD8_TEM L2
ENSG00000059758 CDK17 118340 sc-eQTL 4.93e-01 -0.0425 0.0618 0.777 MAIT L2
ENSG00000074527 NTN4 727668 sc-eQTL 3.18e-01 -0.0833 0.0832 0.777 MAIT L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.88e-01 -0.0384 0.0956 0.777 MAIT L2
ENSG00000111145 ELK3 324445 sc-eQTL 5.78e-01 -0.0447 0.0802 0.777 MAIT L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.34e-01 -0.0579 0.0929 0.777 MAIT L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 5.82e-01 0.0575 0.104 0.777 MAIT L2
ENSG00000188596 CFAP54 29249 sc-eQTL 8.42e-01 -0.0207 0.103 0.777 MAIT L2
ENSG00000059758 CDK17 118340 sc-eQTL 9.82e-02 0.11 0.0663 0.776 NK_CD56bright L2
ENSG00000111144 LTA4H 475300 sc-eQTL 7.39e-01 0.0329 0.0987 0.776 NK_CD56bright L2
ENSG00000111145 ELK3 324445 sc-eQTL 3.82e-01 -0.0916 0.105 0.776 NK_CD56bright L2
ENSG00000139343 SNRPF 659892 sc-eQTL 3.97e-01 0.0929 0.109 0.776 NK_CD56bright L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 9.98e-01 -0.000288 0.111 0.776 NK_CD56bright L2
ENSG00000059758 CDK17 118340 sc-eQTL 8.34e-01 0.0116 0.0554 0.778 NK_CD56dim L2
ENSG00000111144 LTA4H 475300 sc-eQTL 7.38e-01 -0.0336 0.1 0.778 NK_CD56dim L2
ENSG00000111145 ELK3 324445 sc-eQTL 5.52e-01 -0.0528 0.0886 0.778 NK_CD56dim L2
ENSG00000139343 SNRPF 659892 sc-eQTL 7.09e-01 -0.0315 0.0843 0.778 NK_CD56dim L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 3.85e-02 -0.2 0.0962 0.778 NK_CD56dim L2
ENSG00000059758 CDK17 118340 sc-eQTL 6.64e-01 0.0385 0.0884 0.779 NK_HLA L2
ENSG00000111144 LTA4H 475300 sc-eQTL 9.65e-01 0.00515 0.116 0.779 NK_HLA L2
ENSG00000111145 ELK3 324445 sc-eQTL 8.50e-01 -0.0204 0.108 0.779 NK_HLA L2
ENSG00000139343 SNRPF 659892 sc-eQTL 9.04e-01 -0.0136 0.112 0.779 NK_HLA L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.08e-01 -0.0878 0.106 0.779 NK_HLA L2
ENSG00000059758 CDK17 118340 sc-eQTL 5.07e-01 0.0403 0.0606 0.778 NK_cytokine L2
ENSG00000111144 LTA4H 475300 sc-eQTL 5.52e-01 0.0611 0.102 0.778 NK_cytokine L2
ENSG00000111145 ELK3 324445 sc-eQTL 6.18e-01 -0.0489 0.0981 0.778 NK_cytokine L2
ENSG00000139343 SNRPF 659892 sc-eQTL 9.40e-01 0.00629 0.0832 0.778 NK_cytokine L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.19e-01 0.0831 0.103 0.778 NK_cytokine L2
ENSG00000059758 CDK17 118340 sc-eQTL 1.39e-01 -0.184 0.123 0.793 PB L2
ENSG00000111144 LTA4H 475300 sc-eQTL 8.94e-01 -0.0147 0.11 0.793 PB L2
ENSG00000111145 ELK3 324445 sc-eQTL 4.72e-01 -0.101 0.141 0.793 PB L2
ENSG00000136014 USP44 967344 sc-eQTL 6.05e-01 0.0677 0.13 0.793 PB L2
ENSG00000139343 SNRPF 659892 sc-eQTL 6.33e-01 -0.0658 0.137 0.793 PB L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 9.85e-01 -0.00311 0.163 0.793 PB L2
ENSG00000059758 CDK17 118340 sc-eQTL 9.89e-01 0.000919 0.0676 0.776 Pro_T L2
ENSG00000074527 NTN4 727668 sc-eQTL 1.30e-01 -0.115 0.0755 0.776 Pro_T L2
ENSG00000111144 LTA4H 475300 sc-eQTL 4.47e-01 0.0678 0.0891 0.776 Pro_T L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.94e-01 0.0282 0.108 0.776 Pro_T L2
ENSG00000139343 SNRPF 659892 sc-eQTL 7.46e-01 0.0221 0.068 0.776 Pro_T L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 5.18e-01 0.0639 0.0988 0.776 Pro_T L2
ENSG00000188596 CFAP54 29249 sc-eQTL 6.61e-01 0.035 0.0799 0.776 Pro_T L2
ENSG00000059758 CDK17 118340 sc-eQTL 9.80e-01 0.0018 0.0735 0.778 Treg L2
ENSG00000111144 LTA4H 475300 sc-eQTL 6.12e-01 -0.0473 0.0931 0.778 Treg L2
ENSG00000111145 ELK3 324445 sc-eQTL 3.57e-01 -0.0778 0.0842 0.778 Treg L2
ENSG00000136014 USP44 967344 sc-eQTL 5.06e-01 0.063 0.0947 0.778 Treg L2
ENSG00000139343 SNRPF 659892 sc-eQTL 1.93e-01 0.127 0.0973 0.778 Treg L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.75e-01 0.148 0.109 0.778 Treg L2
ENSG00000059758 CDK17 118340 sc-eQTL 6.41e-01 -0.0426 0.0913 0.776 cDC L2
ENSG00000084110 HAL 522455 sc-eQTL 8.31e-01 0.0203 0.0949 0.776 cDC L2
ENSG00000111144 LTA4H 475300 sc-eQTL 3.38e-01 0.078 0.0812 0.776 cDC L2
ENSG00000111145 ELK3 324445 sc-eQTL 4.00e-01 -0.0905 0.107 0.776 cDC L2
ENSG00000139343 SNRPF 659892 sc-eQTL 6.00e-01 0.0473 0.0899 0.776 cDC L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 7.38e-01 -0.0367 0.11 0.776 cDC L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 6.01e-01 -0.0483 0.0923 0.776 cDC L2
ENSG00000059758 CDK17 118340 sc-eQTL 1.63e-01 -0.11 0.0786 0.778 cMono_IL1B L2
ENSG00000084110 HAL 522455 sc-eQTL 6.38e-01 -0.0406 0.0861 0.778 cMono_IL1B L2
ENSG00000111144 LTA4H 475300 sc-eQTL 7.83e-02 0.163 0.0924 0.778 cMono_IL1B L2
ENSG00000111145 ELK3 324445 sc-eQTL 2.05e-01 -0.0908 0.0714 0.778 cMono_IL1B L2
ENSG00000139343 SNRPF 659892 sc-eQTL 5.71e-01 -0.0419 0.0739 0.778 cMono_IL1B L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 5.13e-03 -0.283 0.1 0.778 cMono_IL1B L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 5.21e-01 0.0611 0.095 0.778 cMono_IL1B L2
ENSG00000059758 CDK17 118340 sc-eQTL 2.52e-01 -0.102 0.0893 0.778 cMono_S100A L2
ENSG00000084110 HAL 522455 sc-eQTL 6.13e-01 0.0509 0.1 0.778 cMono_S100A L2
ENSG00000111144 LTA4H 475300 sc-eQTL 2.58e-01 0.114 0.1 0.778 cMono_S100A L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.91e-01 0.0217 0.0817 0.778 cMono_S100A L2
ENSG00000139343 SNRPF 659892 sc-eQTL 9.12e-01 0.00889 0.0808 0.778 cMono_S100A L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.67e-01 -0.15 0.109 0.778 cMono_S100A L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 7.05e-01 0.0389 0.103 0.778 cMono_S100A L2
ENSG00000059758 CDK17 118340 sc-eQTL 4.41e-01 0.0684 0.0885 0.767 gdT L2
ENSG00000074527 NTN4 727668 sc-eQTL 9.90e-01 -0.00126 0.102 0.767 gdT L2
ENSG00000111144 LTA4H 475300 sc-eQTL 3.15e-01 0.133 0.132 0.767 gdT L2
ENSG00000111145 ELK3 324445 sc-eQTL 8.07e-01 0.03 0.123 0.767 gdT L2
ENSG00000139343 SNRPF 659892 sc-eQTL 9.45e-01 -0.00812 0.119 0.767 gdT L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.37e-01 0.102 0.131 0.767 gdT L2
ENSG00000188596 CFAP54 29249 sc-eQTL 3.73e-01 0.102 0.114 0.767 gdT L2
ENSG00000059758 CDK17 118340 sc-eQTL 1.80e-01 -0.133 0.099 0.773 intMono L2
ENSG00000084110 HAL 522455 sc-eQTL 5.59e-01 0.0588 0.1 0.773 intMono L2
ENSG00000111144 LTA4H 475300 sc-eQTL 3.96e-01 0.0876 0.103 0.773 intMono L2
ENSG00000111145 ELK3 324445 sc-eQTL 3.98e-01 0.0777 0.0917 0.773 intMono L2
ENSG00000139343 SNRPF 659892 sc-eQTL 8.62e-02 -0.168 0.0975 0.773 intMono L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 3.40e-01 -0.0973 0.102 0.773 intMono L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 6.21e-01 0.0507 0.103 0.773 intMono L2
ENSG00000059758 CDK17 118340 sc-eQTL 5.95e-01 0.0423 0.0794 0.769 ncMono L2
ENSG00000084110 HAL 522455 sc-eQTL 2.02e-01 -0.113 0.0883 0.769 ncMono L2
ENSG00000111144 LTA4H 475300 sc-eQTL 4.93e-01 0.0678 0.0988 0.769 ncMono L2
ENSG00000111145 ELK3 324445 sc-eQTL 7.71e-01 -0.0247 0.0849 0.769 ncMono L2
ENSG00000139343 SNRPF 659892 sc-eQTL 4.50e-01 0.0655 0.0866 0.769 ncMono L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 8.63e-01 -0.0159 0.0921 0.769 ncMono L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 9.43e-01 0.00758 0.105 0.769 ncMono L2
ENSG00000059758 CDK17 118340 sc-eQTL 5.19e-02 -0.204 0.104 0.777 pDC L2
ENSG00000084110 HAL 522455 sc-eQTL 7.72e-01 0.0257 0.0888 0.777 pDC L2
ENSG00000111144 LTA4H 475300 sc-eQTL 2.24e-01 0.121 0.099 0.777 pDC L2
ENSG00000111145 ELK3 324445 sc-eQTL 4.82e-01 -0.0855 0.121 0.777 pDC L2
ENSG00000139343 SNRPF 659892 sc-eQTL 9.17e-01 -0.0111 0.106 0.777 pDC L2
ENSG00000139350 NEDD1 -388403 sc-eQTL 4.19e-01 -0.0947 0.117 0.777 pDC L2
ENSG00000257715 AC007298.1 493497 sc-eQTL 6.85e-01 0.0408 0.1 0.777 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 118340 sc-eQTL 4.41e-01 -0.0549 0.0711 0.778 B_Memory LOneK1K
ENSG00000111144 LTA4H 475300 sc-eQTL 9.27e-01 -0.00679 0.0739 0.778 B_Memory LOneK1K
ENSG00000111145 ELK3 324445 sc-eQTL 9.29e-01 -0.00754 0.0845 0.778 B_Memory LOneK1K
ENSG00000136014 USP44 967344 sc-eQTL 1.97e-03 -0.322 0.103 0.778 B_Memory LOneK1K
ENSG00000139343 SNRPF 659892 sc-eQTL 2.86e-01 -0.0873 0.0816 0.778 B_Memory LOneK1K
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.37e-01 0.159 0.107 0.778 B_Memory LOneK1K
ENSG00000059758 CDK17 118340 sc-eQTL 1.34e-01 -0.0915 0.0608 0.778 B_Naive LOneK1K
ENSG00000111144 LTA4H 475300 sc-eQTL 2.88e-01 0.0729 0.0684 0.778 B_Naive LOneK1K
ENSG00000111145 ELK3 324445 sc-eQTL 1.86e-01 -0.103 0.0778 0.778 B_Naive LOneK1K
ENSG00000136014 USP44 967344 sc-eQTL 4.17e-01 -0.0775 0.0954 0.778 B_Naive LOneK1K
ENSG00000139343 SNRPF 659892 sc-eQTL 6.30e-01 0.038 0.0786 0.778 B_Naive LOneK1K
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.79e-01 -0.14 0.104 0.778 B_Naive LOneK1K
ENSG00000059758 CDK17 118340 sc-eQTL 7.85e-02 -0.125 0.0708 0.778 CD14_Mono LOneK1K
ENSG00000084110 HAL 522455 sc-eQTL 6.71e-01 -0.0368 0.0864 0.778 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 475300 sc-eQTL 1.07e-01 0.153 0.0943 0.778 CD14_Mono LOneK1K
ENSG00000111145 ELK3 324445 sc-eQTL 6.35e-01 -0.0325 0.0685 0.778 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 659892 sc-eQTL 9.88e-01 0.00102 0.0661 0.778 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -388403 sc-eQTL 1.24e-02 -0.258 0.102 0.778 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 493497 sc-eQTL 3.15e-01 0.0966 0.0959 0.778 CD14_Mono LOneK1K
ENSG00000059758 CDK17 118340 sc-eQTL 6.08e-01 -0.0376 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000084110 HAL 522455 sc-eQTL 4.75e-01 -0.062 0.0866 0.776 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 475300 sc-eQTL 4.06e-01 0.0799 0.096 0.776 CD16_Mono LOneK1K
ENSG00000111145 ELK3 324445 sc-eQTL 8.10e-01 -0.0171 0.0711 0.776 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 659892 sc-eQTL 4.76e-01 -0.0523 0.0733 0.776 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -388403 sc-eQTL 3.00e-01 -0.0976 0.0938 0.776 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 493497 sc-eQTL 8.97e-01 0.0129 0.0996 0.776 CD16_Mono LOneK1K
ENSG00000059758 CDK17 118340 sc-eQTL 8.37e-01 0.0108 0.0521 0.778 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 475300 sc-eQTL 6.04e-01 -0.047 0.0905 0.778 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 324445 sc-eQTL 3.65e-01 -0.0752 0.0827 0.778 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 659892 sc-eQTL 5.56e-01 -0.0418 0.0708 0.778 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -388403 sc-eQTL 2.23e-01 -0.108 0.0881 0.778 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -388403 eQTL 1.91e-20 -0.251 0.0265 0.0 0.0 0.228
ENSG00000188596 CFAP54 29245 eQTL 1.06e-07 -0.122 0.0228 0.0144 0.0134 0.228

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -388403 1.28e-06 9.15e-07 2.1e-07 6.38e-07 1.77e-07 4.35e-07 8.73e-07 2.62e-07 1.09e-06 3.13e-07 1.36e-06 5.76e-07 1.57e-06 2.57e-07 4.41e-07 5.7e-07 7.73e-07 5.33e-07 3.71e-07 4.32e-07 2.97e-07 9.14e-07 6.93e-07 4.09e-07 1.92e-06 2.44e-07 6.16e-07 5.67e-07 7.61e-07 9.22e-07 5.39e-07 7.24e-08 1.73e-07 3.79e-07 4.07e-07 2.94e-07 4.21e-07 1.59e-07 1.46e-07 7.62e-08 2.85e-07 1.34e-06 6.87e-08 3.4e-08 1.8e-07 7.43e-08 1.41e-07 8.43e-08 5.02e-08
ENSG00000188596 CFAP54 29245 1.56e-05 2.06e-05 3.2e-06 1.12e-05 3.08e-06 7.99e-06 2.38e-05 3.29e-06 1.73e-05 8.88e-06 2.31e-05 8.35e-06 3.24e-05 7.62e-06 5.1e-06 1.03e-05 9.53e-06 1.47e-05 5.39e-06 4.29e-06 8.58e-06 1.79e-05 1.8e-05 5.67e-06 2.91e-05 5.37e-06 8.01e-06 7.92e-06 1.9e-05 1.77e-05 1.24e-05 1.33e-06 1.73e-06 4.84e-06 7.51e-06 4.46e-06 2.04e-06 2.71e-06 3.24e-06 2.37e-06 1.3e-06 2.39e-05 2.48e-06 2.86e-07 1.81e-06 2.75e-06 2.91e-06 1.24e-06 1.07e-06