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Genes within 1Mb (chr12:96507220:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 106740 sc-eQTL 9.36e-02 -0.0902 0.0535 0.774 B L1
ENSG00000111144 LTA4H 463700 sc-eQTL 2.00e-01 0.0857 0.0667 0.774 B L1
ENSG00000111145 ELK3 312845 sc-eQTL 4.84e-01 -0.05 0.0712 0.774 B L1
ENSG00000136014 USP44 955744 sc-eQTL 3.60e-02 -0.184 0.087 0.774 B L1
ENSG00000139343 SNRPF 648292 sc-eQTL 8.57e-01 -0.0117 0.0648 0.774 B L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.15e-01 -0.149 0.094 0.774 B L1
ENSG00000059758 CDK17 106740 sc-eQTL 3.84e-02 -0.0906 0.0435 0.774 CD4T L1
ENSG00000111144 LTA4H 463700 sc-eQTL 4.63e-01 -0.0443 0.0602 0.774 CD4T L1
ENSG00000111145 ELK3 312845 sc-eQTL 8.60e-01 0.0116 0.0653 0.774 CD4T L1
ENSG00000136014 USP44 955744 sc-eQTL 2.09e-01 0.117 0.0928 0.774 CD4T L1
ENSG00000139343 SNRPF 648292 sc-eQTL 3.13e-01 -0.0577 0.057 0.774 CD4T L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 2.61e-01 0.079 0.0701 0.774 CD4T L1
ENSG00000059758 CDK17 106740 sc-eQTL 1.79e-02 -0.107 0.0447 0.774 CD8T L1
ENSG00000111144 LTA4H 463700 sc-eQTL 7.62e-01 0.0147 0.0487 0.774 CD8T L1
ENSG00000111145 ELK3 312845 sc-eQTL 9.90e-01 -0.000911 0.0733 0.774 CD8T L1
ENSG00000136014 USP44 955744 sc-eQTL 3.74e-01 0.0741 0.0831 0.774 CD8T L1
ENSG00000139343 SNRPF 648292 sc-eQTL 2.16e-01 0.0742 0.0598 0.774 CD8T L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 7.47e-01 0.0258 0.0798 0.774 CD8T L1
ENSG00000059758 CDK17 106740 sc-eQTL 9.19e-02 -0.143 0.0847 0.77 DC L1
ENSG00000084110 HAL 510855 sc-eQTL 6.61e-01 -0.0426 0.097 0.77 DC L1
ENSG00000111144 LTA4H 463700 sc-eQTL 7.61e-01 0.0242 0.0794 0.77 DC L1
ENSG00000111145 ELK3 312845 sc-eQTL 2.45e-01 -0.113 0.0969 0.77 DC L1
ENSG00000139343 SNRPF 648292 sc-eQTL 3.83e-01 0.0705 0.0807 0.77 DC L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.61e-01 -0.0766 0.104 0.77 DC L1
ENSG00000257715 AC007298.1 481897 sc-eQTL 1.27e-01 -0.143 0.0932 0.77 DC L1
ENSG00000059758 CDK17 106740 sc-eQTL 3.25e-01 -0.0663 0.0673 0.774 Mono L1
ENSG00000084110 HAL 510855 sc-eQTL 5.90e-01 -0.0458 0.0849 0.774 Mono L1
ENSG00000111144 LTA4H 463700 sc-eQTL 1.01e-01 0.157 0.0954 0.774 Mono L1
ENSG00000111145 ELK3 312845 sc-eQTL 6.02e-01 -0.0336 0.0644 0.774 Mono L1
ENSG00000139343 SNRPF 648292 sc-eQTL 9.16e-01 0.0064 0.0608 0.774 Mono L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.44e-02 -0.227 0.092 0.774 Mono L1
ENSG00000257715 AC007298.1 481897 sc-eQTL 2.83e-01 0.097 0.0902 0.774 Mono L1
ENSG00000059758 CDK17 106740 sc-eQTL 5.27e-01 0.0321 0.0507 0.773 NK L1
ENSG00000111144 LTA4H 463700 sc-eQTL 5.21e-01 -0.0553 0.086 0.773 NK L1
ENSG00000111145 ELK3 312845 sc-eQTL 4.05e-01 -0.0681 0.0815 0.773 NK L1
ENSG00000139343 SNRPF 648292 sc-eQTL 9.50e-01 0.00424 0.0677 0.773 NK L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.95e-01 -0.111 0.0854 0.773 NK L1
ENSG00000059758 CDK17 106740 sc-eQTL 4.75e-01 0.0308 0.043 0.774 Other_T L1
ENSG00000074527 NTN4 716068 sc-eQTL 4.60e-01 -0.0588 0.0795 0.774 Other_T L1
ENSG00000111144 LTA4H 463700 sc-eQTL 9.75e-01 -0.00286 0.09 0.774 Other_T L1
ENSG00000111145 ELK3 312845 sc-eQTL 8.42e-01 -0.014 0.0702 0.774 Other_T L1
ENSG00000139343 SNRPF 648292 sc-eQTL 8.21e-01 0.0148 0.0653 0.774 Other_T L1
ENSG00000139350 NEDD1 -400003 sc-eQTL 3.18e-01 -0.0993 0.0991 0.774 Other_T L1
ENSG00000188596 CFAP54 17649 sc-eQTL 2.82e-01 0.111 0.103 0.774 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 106740 sc-eQTL 9.87e-01 0.00157 0.0975 0.77 B_Activated L2
ENSG00000111144 LTA4H 463700 sc-eQTL 3.04e-01 0.113 0.11 0.77 B_Activated L2
ENSG00000111145 ELK3 312845 sc-eQTL 3.00e-01 0.121 0.117 0.77 B_Activated L2
ENSG00000136014 USP44 955744 sc-eQTL 1.16e-01 0.141 0.0892 0.77 B_Activated L2
ENSG00000139343 SNRPF 648292 sc-eQTL 2.79e-01 0.119 0.11 0.77 B_Activated L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 5.76e-01 -0.0645 0.115 0.77 B_Activated L2
ENSG00000059758 CDK17 106740 sc-eQTL 6.62e-01 -0.0372 0.0849 0.773 B_Intermediate L2
ENSG00000111144 LTA4H 463700 sc-eQTL 8.14e-01 0.0194 0.0823 0.773 B_Intermediate L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.53e-02 -0.171 0.092 0.773 B_Intermediate L2
ENSG00000136014 USP44 955744 sc-eQTL 1.35e-02 -0.269 0.108 0.773 B_Intermediate L2
ENSG00000139343 SNRPF 648292 sc-eQTL 6.73e-01 -0.039 0.0924 0.773 B_Intermediate L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 9.55e-01 -0.00611 0.108 0.773 B_Intermediate L2
ENSG00000059758 CDK17 106740 sc-eQTL 7.40e-01 -0.0273 0.0823 0.778 B_Memory L2
ENSG00000111144 LTA4H 463700 sc-eQTL 9.72e-02 -0.157 0.0944 0.778 B_Memory L2
ENSG00000111145 ELK3 312845 sc-eQTL 3.14e-01 0.094 0.0932 0.778 B_Memory L2
ENSG00000136014 USP44 955744 sc-eQTL 8.51e-02 -0.176 0.102 0.778 B_Memory L2
ENSG00000139343 SNRPF 648292 sc-eQTL 5.60e-01 -0.0577 0.0989 0.778 B_Memory L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 6.23e-02 0.204 0.109 0.778 B_Memory L2
ENSG00000059758 CDK17 106740 sc-eQTL 6.34e-02 -0.124 0.0667 0.774 B_Naive1 L2
ENSG00000111144 LTA4H 463700 sc-eQTL 5.91e-01 0.0379 0.0704 0.774 B_Naive1 L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.07e-01 -0.0429 0.0832 0.774 B_Naive1 L2
ENSG00000136014 USP44 955744 sc-eQTL 5.49e-01 -0.0628 0.105 0.774 B_Naive1 L2
ENSG00000139343 SNRPF 648292 sc-eQTL 3.63e-01 0.0737 0.0808 0.774 B_Naive1 L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 6.91e-01 0.0413 0.104 0.774 B_Naive1 L2
ENSG00000059758 CDK17 106740 sc-eQTL 7.10e-01 -0.0317 0.0853 0.775 B_Naive2 L2
ENSG00000111144 LTA4H 463700 sc-eQTL 5.10e-01 0.0533 0.0808 0.775 B_Naive2 L2
ENSG00000111145 ELK3 312845 sc-eQTL 5.98e-01 -0.0503 0.0953 0.775 B_Naive2 L2
ENSG00000136014 USP44 955744 sc-eQTL 6.03e-01 -0.0536 0.103 0.775 B_Naive2 L2
ENSG00000139343 SNRPF 648292 sc-eQTL 4.64e-01 0.0693 0.0946 0.775 B_Naive2 L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 8.88e-03 -0.293 0.111 0.775 B_Naive2 L2
ENSG00000059758 CDK17 106740 sc-eQTL 4.96e-01 -0.0529 0.0776 0.775 CD4_CTL L2
ENSG00000111144 LTA4H 463700 sc-eQTL 2.97e-01 -0.114 0.109 0.775 CD4_CTL L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.76e-01 0.0464 0.111 0.775 CD4_CTL L2
ENSG00000136014 USP44 955744 sc-eQTL 4.20e-01 0.0713 0.0884 0.775 CD4_CTL L2
ENSG00000139343 SNRPF 648292 sc-eQTL 8.83e-01 -0.0142 0.0964 0.775 CD4_CTL L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 3.25e-02 -0.237 0.11 0.775 CD4_CTL L2
ENSG00000059758 CDK17 106740 sc-eQTL 3.79e-02 -0.0996 0.0477 0.774 CD4_Naive L2
ENSG00000111144 LTA4H 463700 sc-eQTL 2.97e-01 -0.0727 0.0695 0.774 CD4_Naive L2
ENSG00000111145 ELK3 312845 sc-eQTL 8.37e-01 -0.0143 0.0697 0.774 CD4_Naive L2
ENSG00000136014 USP44 955744 sc-eQTL 1.39e-01 0.144 0.0972 0.774 CD4_Naive L2
ENSG00000139343 SNRPF 648292 sc-eQTL 3.89e-01 -0.0534 0.0618 0.774 CD4_Naive L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 6.70e-01 0.0326 0.0762 0.774 CD4_Naive L2
ENSG00000059758 CDK17 106740 sc-eQTL 9.80e-02 -0.0778 0.0468 0.774 CD4_TCM L2
ENSG00000111144 LTA4H 463700 sc-eQTL 5.84e-01 -0.0438 0.0798 0.774 CD4_TCM L2
ENSG00000111145 ELK3 312845 sc-eQTL 1.35e-01 0.117 0.0782 0.774 CD4_TCM L2
ENSG00000136014 USP44 955744 sc-eQTL 7.86e-01 0.0296 0.109 0.774 CD4_TCM L2
ENSG00000139343 SNRPF 648292 sc-eQTL 6.05e-01 -0.0334 0.0644 0.774 CD4_TCM L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 2.08e-01 0.111 0.0878 0.774 CD4_TCM L2
ENSG00000059758 CDK17 106740 sc-eQTL 6.63e-01 0.0253 0.0581 0.774 CD4_TEM L2
ENSG00000111144 LTA4H 463700 sc-eQTL 9.37e-01 0.00715 0.0897 0.774 CD4_TEM L2
ENSG00000111145 ELK3 312845 sc-eQTL 8.54e-01 0.0153 0.0833 0.774 CD4_TEM L2
ENSG00000136014 USP44 955744 sc-eQTL 6.49e-01 0.0468 0.102 0.774 CD4_TEM L2
ENSG00000139343 SNRPF 648292 sc-eQTL 1.26e-01 -0.133 0.0868 0.774 CD4_TEM L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 8.27e-01 -0.0226 0.103 0.774 CD4_TEM L2
ENSG00000059758 CDK17 106740 sc-eQTL 8.68e-01 -0.0094 0.0565 0.774 CD8_CTL L2
ENSG00000111144 LTA4H 463700 sc-eQTL 4.43e-01 0.0783 0.102 0.774 CD8_CTL L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.85e-02 0.169 0.0922 0.774 CD8_CTL L2
ENSG00000136014 USP44 955744 sc-eQTL 5.01e-01 0.0698 0.103 0.774 CD8_CTL L2
ENSG00000139343 SNRPF 648292 sc-eQTL 3.91e-01 0.0733 0.0853 0.774 CD8_CTL L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 2.85e-01 -0.102 0.0955 0.774 CD8_CTL L2
ENSG00000059758 CDK17 106740 sc-eQTL 4.86e-02 -0.134 0.0677 0.774 CD8_Naive L2
ENSG00000111144 LTA4H 463700 sc-eQTL 7.73e-01 0.0237 0.0818 0.774 CD8_Naive L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.65e-01 -0.0375 0.0865 0.774 CD8_Naive L2
ENSG00000136014 USP44 955744 sc-eQTL 4.24e-01 0.0727 0.0908 0.774 CD8_Naive L2
ENSG00000139343 SNRPF 648292 sc-eQTL 4.39e-01 0.0602 0.0777 0.774 CD8_Naive L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 8.16e-02 0.161 0.092 0.774 CD8_Naive L2
ENSG00000059758 CDK17 106740 sc-eQTL 5.17e-01 0.0468 0.072 0.769 CD8_TCM L2
ENSG00000111144 LTA4H 463700 sc-eQTL 1.74e-01 -0.144 0.105 0.769 CD8_TCM L2
ENSG00000111145 ELK3 312845 sc-eQTL 9.74e-01 -0.0029 0.0897 0.769 CD8_TCM L2
ENSG00000136014 USP44 955744 sc-eQTL 6.30e-01 -0.0468 0.0971 0.769 CD8_TCM L2
ENSG00000139343 SNRPF 648292 sc-eQTL 5.23e-01 0.0661 0.103 0.769 CD8_TCM L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 9.74e-01 0.00336 0.101 0.769 CD8_TCM L2
ENSG00000059758 CDK17 106740 sc-eQTL 3.44e-01 -0.0871 0.0918 0.774 CD8_TEM L2
ENSG00000111144 LTA4H 463700 sc-eQTL 5.42e-01 0.0688 0.113 0.774 CD8_TEM L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.55e-01 0.0496 0.111 0.774 CD8_TEM L2
ENSG00000136014 USP44 955744 sc-eQTL 7.95e-01 -0.0245 0.0943 0.774 CD8_TEM L2
ENSG00000139343 SNRPF 648292 sc-eQTL 4.25e-01 0.0822 0.103 0.774 CD8_TEM L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 7.02e-01 0.0429 0.112 0.774 CD8_TEM L2
ENSG00000059758 CDK17 106740 sc-eQTL 5.25e-01 -0.0389 0.0612 0.773 MAIT L2
ENSG00000074527 NTN4 716068 sc-eQTL 3.74e-01 -0.0734 0.0823 0.773 MAIT L2
ENSG00000111144 LTA4H 463700 sc-eQTL 6.58e-01 -0.042 0.0945 0.773 MAIT L2
ENSG00000111145 ELK3 312845 sc-eQTL 5.07e-01 -0.0527 0.0793 0.773 MAIT L2
ENSG00000139343 SNRPF 648292 sc-eQTL 6.24e-01 -0.0452 0.0919 0.773 MAIT L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 6.43e-01 0.0479 0.103 0.773 MAIT L2
ENSG00000188596 CFAP54 17649 sc-eQTL 8.02e-01 -0.0257 0.102 0.773 MAIT L2
ENSG00000059758 CDK17 106740 sc-eQTL 6.73e-02 0.12 0.0654 0.771 NK_CD56bright L2
ENSG00000111144 LTA4H 463700 sc-eQTL 8.29e-01 0.0211 0.0975 0.771 NK_CD56bright L2
ENSG00000111145 ELK3 312845 sc-eQTL 3.07e-01 -0.106 0.103 0.771 NK_CD56bright L2
ENSG00000139343 SNRPF 648292 sc-eQTL 3.66e-01 0.0979 0.108 0.771 NK_CD56bright L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 9.56e-01 -0.00609 0.109 0.771 NK_CD56bright L2
ENSG00000059758 CDK17 106740 sc-eQTL 9.36e-01 -0.00438 0.0548 0.774 NK_CD56dim L2
ENSG00000111144 LTA4H 463700 sc-eQTL 6.43e-01 -0.0459 0.0989 0.774 NK_CD56dim L2
ENSG00000111145 ELK3 312845 sc-eQTL 5.01e-01 -0.059 0.0875 0.774 NK_CD56dim L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.08e-01 -0.00961 0.0834 0.774 NK_CD56dim L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.56e-02 -0.191 0.0951 0.774 NK_CD56dim L2
ENSG00000059758 CDK17 106740 sc-eQTL 7.93e-01 0.0229 0.0872 0.774 NK_HLA L2
ENSG00000111144 LTA4H 463700 sc-eQTL 8.95e-01 -0.0151 0.114 0.774 NK_HLA L2
ENSG00000111145 ELK3 312845 sc-eQTL 9.23e-01 0.0102 0.106 0.774 NK_HLA L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.61e-01 0.00545 0.111 0.774 NK_HLA L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.89e-01 -0.0725 0.104 0.774 NK_HLA L2
ENSG00000059758 CDK17 106740 sc-eQTL 7.70e-01 0.0175 0.0599 0.774 NK_cytokine L2
ENSG00000111144 LTA4H 463700 sc-eQTL 6.29e-01 0.0489 0.101 0.774 NK_cytokine L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.11e-01 -0.0493 0.0968 0.774 NK_cytokine L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.41e-01 0.00604 0.0821 0.774 NK_cytokine L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.03e-01 0.0848 0.101 0.774 NK_cytokine L2
ENSG00000059758 CDK17 106740 sc-eQTL 1.03e-01 -0.202 0.123 0.789 PB L2
ENSG00000111144 LTA4H 463700 sc-eQTL 9.33e-01 -0.0093 0.11 0.789 PB L2
ENSG00000111145 ELK3 312845 sc-eQTL 5.67e-01 -0.0805 0.14 0.789 PB L2
ENSG00000136014 USP44 955744 sc-eQTL 6.53e-01 0.0586 0.13 0.789 PB L2
ENSG00000139343 SNRPF 648292 sc-eQTL 5.29e-01 -0.0864 0.137 0.789 PB L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 9.53e-01 0.00961 0.163 0.789 PB L2
ENSG00000059758 CDK17 106740 sc-eQTL 9.76e-01 -0.002 0.0667 0.772 Pro_T L2
ENSG00000074527 NTN4 716068 sc-eQTL 1.04e-01 -0.121 0.0744 0.772 Pro_T L2
ENSG00000111144 LTA4H 463700 sc-eQTL 3.97e-01 0.0746 0.0879 0.772 Pro_T L2
ENSG00000111145 ELK3 312845 sc-eQTL 7.46e-01 0.0345 0.106 0.772 Pro_T L2
ENSG00000139343 SNRPF 648292 sc-eQTL 6.76e-01 0.0281 0.0671 0.772 Pro_T L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 5.17e-01 0.0632 0.0974 0.772 Pro_T L2
ENSG00000188596 CFAP54 17649 sc-eQTL 5.86e-01 0.0429 0.0788 0.772 Pro_T L2
ENSG00000059758 CDK17 106740 sc-eQTL 8.51e-01 -0.0136 0.0726 0.774 Treg L2
ENSG00000111144 LTA4H 463700 sc-eQTL 5.75e-01 -0.0516 0.0919 0.774 Treg L2
ENSG00000111145 ELK3 312845 sc-eQTL 2.11e-01 -0.104 0.083 0.774 Treg L2
ENSG00000136014 USP44 955744 sc-eQTL 5.09e-01 0.0618 0.0935 0.774 Treg L2
ENSG00000139343 SNRPF 648292 sc-eQTL 2.54e-01 0.11 0.0962 0.774 Treg L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.70e-01 0.148 0.107 0.774 Treg L2
ENSG00000059758 CDK17 106740 sc-eQTL 4.59e-01 -0.0668 0.0899 0.771 cDC L2
ENSG00000084110 HAL 510855 sc-eQTL 7.39e-01 0.0312 0.0936 0.771 cDC L2
ENSG00000111144 LTA4H 463700 sc-eQTL 2.43e-01 0.0937 0.0799 0.771 cDC L2
ENSG00000111145 ELK3 312845 sc-eQTL 7.33e-01 -0.0361 0.106 0.771 cDC L2
ENSG00000139343 SNRPF 648292 sc-eQTL 5.81e-01 0.049 0.0886 0.771 cDC L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 6.16e-01 -0.0542 0.108 0.771 cDC L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 3.86e-01 -0.079 0.0909 0.771 cDC L2
ENSG00000059758 CDK17 106740 sc-eQTL 1.29e-01 -0.118 0.0775 0.774 cMono_IL1B L2
ENSG00000084110 HAL 510855 sc-eQTL 6.35e-01 -0.0404 0.085 0.774 cMono_IL1B L2
ENSG00000111144 LTA4H 463700 sc-eQTL 6.94e-02 0.166 0.0911 0.774 cMono_IL1B L2
ENSG00000111145 ELK3 312845 sc-eQTL 1.68e-01 -0.0974 0.0704 0.774 cMono_IL1B L2
ENSG00000139343 SNRPF 648292 sc-eQTL 7.07e-01 -0.0274 0.073 0.774 cMono_IL1B L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.68e-03 -0.282 0.0986 0.774 cMono_IL1B L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 4.58e-01 0.0697 0.0937 0.774 cMono_IL1B L2
ENSG00000059758 CDK17 106740 sc-eQTL 1.25e-01 -0.136 0.0879 0.774 cMono_S100A L2
ENSG00000084110 HAL 510855 sc-eQTL 4.80e-01 0.0701 0.0991 0.774 cMono_S100A L2
ENSG00000111144 LTA4H 463700 sc-eQTL 1.85e-01 0.131 0.0987 0.774 cMono_S100A L2
ENSG00000111145 ELK3 312845 sc-eQTL 6.32e-01 0.0387 0.0807 0.774 cMono_S100A L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.66e-01 0.00345 0.0798 0.774 cMono_S100A L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.62e-01 -0.15 0.107 0.774 cMono_S100A L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 7.41e-01 0.0335 0.101 0.774 cMono_S100A L2
ENSG00000059758 CDK17 106740 sc-eQTL 5.05e-01 0.058 0.0869 0.761 gdT L2
ENSG00000074527 NTN4 716068 sc-eQTL 8.98e-01 0.0129 0.0999 0.761 gdT L2
ENSG00000111144 LTA4H 463700 sc-eQTL 3.84e-01 0.113 0.13 0.761 gdT L2
ENSG00000111145 ELK3 312845 sc-eQTL 7.06e-01 0.0455 0.12 0.761 gdT L2
ENSG00000139343 SNRPF 648292 sc-eQTL 8.93e-01 0.0157 0.116 0.761 gdT L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 5.09e-01 0.0849 0.128 0.761 gdT L2
ENSG00000188596 CFAP54 17649 sc-eQTL 3.27e-01 0.11 0.112 0.761 gdT L2
ENSG00000059758 CDK17 106740 sc-eQTL 2.19e-01 -0.12 0.0977 0.769 intMono L2
ENSG00000084110 HAL 510855 sc-eQTL 6.82e-01 0.0407 0.0992 0.769 intMono L2
ENSG00000111144 LTA4H 463700 sc-eQTL 2.97e-01 0.106 0.101 0.769 intMono L2
ENSG00000111145 ELK3 312845 sc-eQTL 4.03e-01 0.0758 0.0905 0.769 intMono L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.07e-02 -0.164 0.0962 0.769 intMono L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.09e-01 -0.0831 0.1 0.769 intMono L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 6.80e-01 0.0418 0.101 0.769 intMono L2
ENSG00000059758 CDK17 106740 sc-eQTL 6.37e-01 0.0371 0.0784 0.765 ncMono L2
ENSG00000084110 HAL 510855 sc-eQTL 2.69e-01 -0.0968 0.0873 0.765 ncMono L2
ENSG00000111144 LTA4H 463700 sc-eQTL 4.75e-01 0.0699 0.0975 0.765 ncMono L2
ENSG00000111145 ELK3 312845 sc-eQTL 7.83e-01 -0.0231 0.0838 0.765 ncMono L2
ENSG00000139343 SNRPF 648292 sc-eQTL 5.37e-01 0.053 0.0856 0.765 ncMono L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 9.91e-01 0.00106 0.091 0.765 ncMono L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 8.50e-01 0.0196 0.104 0.765 ncMono L2
ENSG00000059758 CDK17 106740 sc-eQTL 3.73e-02 -0.219 0.104 0.771 pDC L2
ENSG00000084110 HAL 510855 sc-eQTL 7.17e-01 0.0324 0.0892 0.771 pDC L2
ENSG00000111144 LTA4H 463700 sc-eQTL 2.17e-01 0.123 0.0994 0.771 pDC L2
ENSG00000111145 ELK3 312845 sc-eQTL 5.65e-01 -0.0704 0.122 0.771 pDC L2
ENSG00000139343 SNRPF 648292 sc-eQTL 9.36e-01 -0.00857 0.107 0.771 pDC L2
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.37e-01 -0.0914 0.117 0.771 pDC L2
ENSG00000257715 AC007298.1 481897 sc-eQTL 6.41e-01 0.0471 0.101 0.771 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 106740 sc-eQTL 4.79e-01 -0.0497 0.0702 0.774 B_Memory LOneK1K
ENSG00000111144 LTA4H 463700 sc-eQTL 9.86e-01 0.00131 0.073 0.774 B_Memory LOneK1K
ENSG00000111145 ELK3 312845 sc-eQTL 9.71e-01 -0.00302 0.0834 0.774 B_Memory LOneK1K
ENSG00000136014 USP44 955744 sc-eQTL 4.10e-03 -0.296 0.102 0.774 B_Memory LOneK1K
ENSG00000139343 SNRPF 648292 sc-eQTL 2.57e-01 -0.0916 0.0806 0.774 B_Memory LOneK1K
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.18e-01 0.165 0.105 0.774 B_Memory LOneK1K
ENSG00000059758 CDK17 106740 sc-eQTL 9.43e-02 -0.101 0.06 0.774 B_Naive LOneK1K
ENSG00000111144 LTA4H 463700 sc-eQTL 2.38e-01 0.0801 0.0676 0.774 B_Naive LOneK1K
ENSG00000111145 ELK3 312845 sc-eQTL 2.75e-01 -0.0843 0.077 0.774 B_Naive LOneK1K
ENSG00000136014 USP44 955744 sc-eQTL 4.15e-01 -0.077 0.0942 0.774 B_Naive LOneK1K
ENSG00000139343 SNRPF 648292 sc-eQTL 4.44e-01 0.0595 0.0776 0.774 B_Naive LOneK1K
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.66e-01 -0.142 0.102 0.774 B_Naive LOneK1K
ENSG00000059758 CDK17 106740 sc-eQTL 3.74e-02 -0.146 0.0697 0.774 CD14_Mono LOneK1K
ENSG00000084110 HAL 510855 sc-eQTL 7.58e-01 -0.0263 0.0852 0.774 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 463700 sc-eQTL 8.50e-02 0.161 0.0929 0.774 CD14_Mono LOneK1K
ENSG00000111145 ELK3 312845 sc-eQTL 6.82e-01 -0.0277 0.0676 0.774 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 648292 sc-eQTL 9.04e-01 0.00788 0.0652 0.774 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -400003 sc-eQTL 1.07e-02 -0.26 0.101 0.774 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 481897 sc-eQTL 2.97e-01 0.0988 0.0945 0.774 CD14_Mono LOneK1K
ENSG00000059758 CDK17 106740 sc-eQTL 6.23e-01 -0.0357 0.0725 0.772 CD16_Mono LOneK1K
ENSG00000084110 HAL 510855 sc-eQTL 5.23e-01 -0.0548 0.0856 0.772 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 463700 sc-eQTL 3.50e-01 0.0888 0.0948 0.772 CD16_Mono LOneK1K
ENSG00000111145 ELK3 312845 sc-eQTL 8.14e-01 -0.0166 0.0703 0.772 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 648292 sc-eQTL 4.31e-01 -0.0571 0.0724 0.772 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -400003 sc-eQTL 4.13e-01 -0.0762 0.0928 0.772 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 481897 sc-eQTL 8.71e-01 0.0159 0.0984 0.772 CD16_Mono LOneK1K
ENSG00000059758 CDK17 106740 sc-eQTL 8.50e-01 -0.00972 0.0514 0.774 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 463700 sc-eQTL 4.97e-01 -0.0607 0.0893 0.774 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 312845 sc-eQTL 3.64e-01 -0.0743 0.0817 0.774 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 648292 sc-eQTL 7.18e-01 -0.0253 0.07 0.774 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -400003 sc-eQTL 2.72e-01 -0.0959 0.087 0.774 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -400003 eQTL 2.14e-20 -0.252 0.0266 0.0 0.0 0.228
ENSG00000188596 CFAP54 17645 eQTL 7.71e-08 -0.124 0.0229 0.0191 0.0181 0.228

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -400003 9.14e-07 6.76e-07 1.24e-07 4.01e-07 1.04e-07 2.86e-07 5.9e-07 1.76e-07 5.02e-07 2.72e-07 9.47e-07 3.91e-07 9.77e-07 1.6e-07 2.44e-07 2.55e-07 5.06e-07 4.22e-07 2.57e-07 1.78e-07 2.51e-07 4.38e-07 4e-07 2.22e-07 1.13e-06 2.6e-07 3.68e-07 3.24e-07 4.22e-07 6.73e-07 3.67e-07 4.28e-08 4.57e-08 1.71e-07 3.66e-07 1.54e-07 1.86e-07 1.14e-07 7.41e-08 8.36e-09 1.47e-07 7.04e-07 4.59e-08 1.29e-08 1.99e-07 1.48e-08 1.21e-07 3.79e-08 5.95e-08
ENSG00000188596 CFAP54 17645 2.2e-05 2.54e-05 5.11e-06 1.35e-05 4.75e-06 1.17e-05 3.35e-05 3.96e-06 2.37e-05 1.23e-05 3.11e-05 1.31e-05 4.02e-05 1.06e-05 5.88e-06 1.4e-05 1.35e-05 2.05e-05 7.21e-06 6.05e-06 1.24e-05 2.53e-05 2.47e-05 8.06e-06 3.6e-05 6.55e-06 1.04e-05 1.04e-05 2.61e-05 2.28e-05 1.55e-05 1.61e-06 2.37e-06 6.67e-06 1.01e-05 5.34e-06 3.17e-06 3.14e-06 4.54e-06 3.22e-06 1.74e-06 3.1e-05 2.71e-06 4.38e-07 2.21e-06 3.36e-06 3.77e-06 1.55e-06 1.57e-06