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Genes within 1Mb (chr12:96496810:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 96330 sc-eQTL 6.63e-01 0.02 0.0457 0.632 B L1
ENSG00000111144 LTA4H 453290 sc-eQTL 4.22e-01 0.0456 0.0567 0.632 B L1
ENSG00000111145 ELK3 302435 sc-eQTL 8.88e-01 -0.00852 0.0604 0.632 B L1
ENSG00000136014 USP44 945334 sc-eQTL 1.10e-02 -0.188 0.0734 0.632 B L1
ENSG00000139343 SNRPF 637882 sc-eQTL 3.45e-01 0.0518 0.0548 0.632 B L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 4.29e-02 -0.162 0.0794 0.632 B L1
ENSG00000059758 CDK17 96330 sc-eQTL 3.97e-01 -0.0317 0.0374 0.632 CD4T L1
ENSG00000111144 LTA4H 453290 sc-eQTL 6.04e-01 -0.0267 0.0514 0.632 CD4T L1
ENSG00000111145 ELK3 302435 sc-eQTL 4.98e-01 -0.0378 0.0556 0.632 CD4T L1
ENSG00000136014 USP44 945334 sc-eQTL 1.25e-01 0.122 0.079 0.632 CD4T L1
ENSG00000139343 SNRPF 637882 sc-eQTL 6.00e-01 -0.0256 0.0486 0.632 CD4T L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 8.96e-01 0.00784 0.0599 0.632 CD4T L1
ENSG00000059758 CDK17 96330 sc-eQTL 5.26e-01 -0.0246 0.0387 0.632 CD8T L1
ENSG00000111144 LTA4H 453290 sc-eQTL 5.89e-01 -0.0225 0.0415 0.632 CD8T L1
ENSG00000111145 ELK3 302435 sc-eQTL 7.28e-01 -0.0218 0.0625 0.632 CD8T L1
ENSG00000136014 USP44 945334 sc-eQTL 4.02e-01 0.0596 0.071 0.632 CD8T L1
ENSG00000139343 SNRPF 637882 sc-eQTL 3.61e-01 0.0468 0.0512 0.632 CD8T L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.11e-01 -0.0347 0.0681 0.632 CD8T L1
ENSG00000059758 CDK17 96330 sc-eQTL 8.40e-01 -0.0146 0.0718 0.626 DC L1
ENSG00000084110 HAL 500445 sc-eQTL 1.42e-01 -0.12 0.0813 0.626 DC L1
ENSG00000111144 LTA4H 453290 sc-eQTL 2.91e-01 0.0706 0.0667 0.626 DC L1
ENSG00000111145 ELK3 302435 sc-eQTL 1.20e-01 -0.127 0.0814 0.626 DC L1
ENSG00000139343 SNRPF 637882 sc-eQTL 5.00e-01 0.0459 0.068 0.626 DC L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 5.35e-01 -0.0542 0.0873 0.626 DC L1
ENSG00000257715 AC007298.1 471487 sc-eQTL 7.78e-01 -0.0223 0.0789 0.626 DC L1
ENSG00000059758 CDK17 96330 sc-eQTL 8.40e-01 -0.0117 0.0575 0.632 Mono L1
ENSG00000084110 HAL 500445 sc-eQTL 5.76e-01 -0.0405 0.0724 0.632 Mono L1
ENSG00000111144 LTA4H 453290 sc-eQTL 8.78e-01 0.0126 0.0818 0.632 Mono L1
ENSG00000111145 ELK3 302435 sc-eQTL 8.16e-01 -0.0128 0.0549 0.632 Mono L1
ENSG00000139343 SNRPF 637882 sc-eQTL 3.58e-01 -0.0476 0.0517 0.632 Mono L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.84e-01 -0.0324 0.0795 0.632 Mono L1
ENSG00000257715 AC007298.1 471487 sc-eQTL 9.25e-01 0.00725 0.077 0.632 Mono L1
ENSG00000059758 CDK17 96330 sc-eQTL 2.62e-02 0.0964 0.0431 0.633 NK L1
ENSG00000111144 LTA4H 453290 sc-eQTL 3.78e-01 -0.0652 0.0738 0.633 NK L1
ENSG00000111145 ELK3 302435 sc-eQTL 9.64e-01 0.00313 0.0702 0.633 NK L1
ENSG00000139343 SNRPF 637882 sc-eQTL 7.09e-01 -0.0217 0.0582 0.633 NK L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 8.34e-01 -0.0154 0.0736 0.633 NK L1
ENSG00000059758 CDK17 96330 sc-eQTL 5.55e-02 0.0699 0.0363 0.632 Other_T L1
ENSG00000074527 NTN4 705658 sc-eQTL 2.86e-01 -0.0722 0.0675 0.632 Other_T L1
ENSG00000111144 LTA4H 453290 sc-eQTL 3.95e-01 -0.0651 0.0764 0.632 Other_T L1
ENSG00000111145 ELK3 302435 sc-eQTL 3.31e-01 -0.058 0.0596 0.632 Other_T L1
ENSG00000139343 SNRPF 637882 sc-eQTL 8.50e-01 0.0105 0.0555 0.632 Other_T L1
ENSG00000139350 NEDD1 -410413 sc-eQTL 4.67e-01 -0.0615 0.0844 0.632 Other_T L1
ENSG00000188596 CFAP54 7239 sc-eQTL 9.12e-01 -0.00967 0.0875 0.632 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 96330 sc-eQTL 8.16e-01 0.0197 0.0845 0.63 B_Activated L2
ENSG00000111144 LTA4H 453290 sc-eQTL 2.53e-01 0.109 0.0954 0.63 B_Activated L2
ENSG00000111145 ELK3 302435 sc-eQTL 2.70e-01 0.112 0.101 0.63 B_Activated L2
ENSG00000136014 USP44 945334 sc-eQTL 1.41e-01 0.114 0.0774 0.63 B_Activated L2
ENSG00000139343 SNRPF 637882 sc-eQTL 2.52e-01 0.109 0.0952 0.63 B_Activated L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 2.66e-01 -0.111 0.0996 0.63 B_Activated L2
ENSG00000059758 CDK17 96330 sc-eQTL 3.04e-01 0.0731 0.071 0.631 B_Intermediate L2
ENSG00000111144 LTA4H 453290 sc-eQTL 5.62e-01 0.04 0.0689 0.631 B_Intermediate L2
ENSG00000111145 ELK3 302435 sc-eQTL 7.23e-02 -0.139 0.0771 0.631 B_Intermediate L2
ENSG00000136014 USP44 945334 sc-eQTL 2.74e-02 -0.201 0.0906 0.631 B_Intermediate L2
ENSG00000139343 SNRPF 637882 sc-eQTL 2.43e-01 -0.0903 0.0772 0.631 B_Intermediate L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 8.06e-01 0.0223 0.0907 0.631 B_Intermediate L2
ENSG00000059758 CDK17 96330 sc-eQTL 7.86e-01 0.0191 0.0702 0.636 B_Memory L2
ENSG00000111144 LTA4H 453290 sc-eQTL 8.50e-01 -0.0153 0.081 0.636 B_Memory L2
ENSG00000111145 ELK3 302435 sc-eQTL 4.73e-01 0.0572 0.0796 0.636 B_Memory L2
ENSG00000136014 USP44 945334 sc-eQTL 1.46e-01 -0.127 0.087 0.636 B_Memory L2
ENSG00000139343 SNRPF 637882 sc-eQTL 4.81e-01 -0.0596 0.0843 0.636 B_Memory L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 2.00e-01 0.12 0.093 0.636 B_Memory L2
ENSG00000059758 CDK17 96330 sc-eQTL 9.03e-01 -0.00702 0.0573 0.632 B_Naive1 L2
ENSG00000111144 LTA4H 453290 sc-eQTL 9.85e-01 -0.00116 0.06 0.632 B_Naive1 L2
ENSG00000111145 ELK3 302435 sc-eQTL 1.99e-01 0.0909 0.0706 0.632 B_Naive1 L2
ENSG00000136014 USP44 945334 sc-eQTL 2.47e-02 -0.199 0.0881 0.632 B_Naive1 L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.35e-02 0.169 0.068 0.632 B_Naive1 L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 9.03e-01 0.0108 0.0884 0.632 B_Naive1 L2
ENSG00000059758 CDK17 96330 sc-eQTL 5.28e-01 0.0461 0.0729 0.633 B_Naive2 L2
ENSG00000111144 LTA4H 453290 sc-eQTL 9.82e-01 -0.00155 0.0692 0.633 B_Naive2 L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.68e-01 -0.0734 0.0814 0.633 B_Naive2 L2
ENSG00000136014 USP44 945334 sc-eQTL 8.32e-01 -0.0188 0.0881 0.633 B_Naive2 L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.30e-01 0.122 0.0805 0.633 B_Naive2 L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 8.08e-03 -0.253 0.0947 0.633 B_Naive2 L2
ENSG00000059758 CDK17 96330 sc-eQTL 6.69e-01 0.0284 0.0663 0.639 CD4_CTL L2
ENSG00000111144 LTA4H 453290 sc-eQTL 6.87e-03 -0.251 0.0918 0.639 CD4_CTL L2
ENSG00000111145 ELK3 302435 sc-eQTL 9.27e-01 0.00871 0.0947 0.639 CD4_CTL L2
ENSG00000136014 USP44 945334 sc-eQTL 9.29e-01 0.0067 0.0756 0.639 CD4_CTL L2
ENSG00000139343 SNRPF 637882 sc-eQTL 6.10e-01 -0.042 0.0822 0.639 CD4_CTL L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 4.20e-01 -0.0768 0.095 0.639 CD4_CTL L2
ENSG00000059758 CDK17 96330 sc-eQTL 3.55e-01 -0.0379 0.0409 0.632 CD4_Naive L2
ENSG00000111144 LTA4H 453290 sc-eQTL 2.27e-01 -0.0716 0.0591 0.632 CD4_Naive L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.60e-01 -0.0544 0.0592 0.632 CD4_Naive L2
ENSG00000136014 USP44 945334 sc-eQTL 5.64e-02 0.158 0.0824 0.632 CD4_Naive L2
ENSG00000139343 SNRPF 637882 sc-eQTL 8.47e-01 -0.0102 0.0527 0.632 CD4_Naive L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 5.56e-01 -0.0383 0.0649 0.632 CD4_Naive L2
ENSG00000059758 CDK17 96330 sc-eQTL 4.68e-01 -0.0292 0.0402 0.632 CD4_TCM L2
ENSG00000111144 LTA4H 453290 sc-eQTL 4.12e-01 -0.056 0.0681 0.632 CD4_TCM L2
ENSG00000111145 ELK3 302435 sc-eQTL 8.03e-01 -0.0168 0.0671 0.632 CD4_TCM L2
ENSG00000136014 USP44 945334 sc-eQTL 5.25e-01 0.059 0.0927 0.632 CD4_TCM L2
ENSG00000139343 SNRPF 637882 sc-eQTL 5.94e-01 -0.0294 0.055 0.632 CD4_TCM L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 3.76e-01 0.0666 0.0751 0.632 CD4_TCM L2
ENSG00000059758 CDK17 96330 sc-eQTL 1.68e-01 0.068 0.0492 0.632 CD4_TEM L2
ENSG00000111144 LTA4H 453290 sc-eQTL 3.16e-01 0.0764 0.0761 0.632 CD4_TEM L2
ENSG00000111145 ELK3 302435 sc-eQTL 8.50e-01 0.0134 0.0709 0.632 CD4_TEM L2
ENSG00000136014 USP44 945334 sc-eQTL 3.43e-01 0.0828 0.087 0.632 CD4_TEM L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.16e-01 -0.116 0.0738 0.632 CD4_TEM L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.91e-01 0.035 0.088 0.632 CD4_TEM L2
ENSG00000059758 CDK17 96330 sc-eQTL 6.40e-02 0.0892 0.0479 0.632 CD8_CTL L2
ENSG00000111144 LTA4H 453290 sc-eQTL 4.68e-01 0.0634 0.0871 0.632 CD8_CTL L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.79e-01 0.0699 0.0792 0.632 CD8_CTL L2
ENSG00000136014 USP44 945334 sc-eQTL 7.11e-01 0.0328 0.0884 0.632 CD8_CTL L2
ENSG00000139343 SNRPF 637882 sc-eQTL 8.29e-01 0.0158 0.073 0.632 CD8_CTL L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 1.91e-01 -0.107 0.0815 0.632 CD8_CTL L2
ENSG00000059758 CDK17 96330 sc-eQTL 4.14e-01 -0.0476 0.0582 0.632 CD8_Naive L2
ENSG00000111144 LTA4H 453290 sc-eQTL 5.43e-01 -0.0425 0.0698 0.632 CD8_Naive L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.24e-01 -0.0729 0.0737 0.632 CD8_Naive L2
ENSG00000136014 USP44 945334 sc-eQTL 6.88e-01 0.0312 0.0776 0.632 CD8_Naive L2
ENSG00000139343 SNRPF 637882 sc-eQTL 2.87e-01 0.0708 0.0663 0.632 CD8_Naive L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.49e-01 0.0361 0.079 0.632 CD8_Naive L2
ENSG00000059758 CDK17 96330 sc-eQTL 5.52e-01 0.0374 0.0627 0.623 CD8_TCM L2
ENSG00000111144 LTA4H 453290 sc-eQTL 8.14e-02 -0.16 0.0916 0.623 CD8_TCM L2
ENSG00000111145 ELK3 302435 sc-eQTL 4.01e-01 0.0657 0.078 0.623 CD8_TCM L2
ENSG00000136014 USP44 945334 sc-eQTL 9.35e-01 -0.00692 0.0846 0.623 CD8_TCM L2
ENSG00000139343 SNRPF 637882 sc-eQTL 2.76e-01 0.098 0.0897 0.623 CD8_TCM L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 3.79e-01 -0.0775 0.088 0.623 CD8_TCM L2
ENSG00000059758 CDK17 96330 sc-eQTL 6.86e-01 -0.0323 0.0798 0.63 CD8_TEM L2
ENSG00000111144 LTA4H 453290 sc-eQTL 9.86e-01 -0.00173 0.0977 0.63 CD8_TEM L2
ENSG00000111145 ELK3 302435 sc-eQTL 9.04e-01 -0.0116 0.0961 0.63 CD8_TEM L2
ENSG00000136014 USP44 945334 sc-eQTL 8.96e-01 -0.0107 0.0818 0.63 CD8_TEM L2
ENSG00000139343 SNRPF 637882 sc-eQTL 6.64e-01 -0.0388 0.0893 0.63 CD8_TEM L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 7.66e-01 -0.0288 0.0969 0.63 CD8_TEM L2
ENSG00000059758 CDK17 96330 sc-eQTL 7.96e-01 -0.0135 0.0523 0.632 MAIT L2
ENSG00000074527 NTN4 705658 sc-eQTL 6.28e-01 -0.0342 0.0705 0.632 MAIT L2
ENSG00000111144 LTA4H 453290 sc-eQTL 8.90e-02 -0.137 0.0802 0.632 MAIT L2
ENSG00000111145 ELK3 302435 sc-eQTL 5.13e-01 -0.0444 0.0677 0.632 MAIT L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.58e-01 -0.111 0.0782 0.632 MAIT L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 9.05e-01 0.0105 0.0882 0.632 MAIT L2
ENSG00000188596 CFAP54 7239 sc-eQTL 3.23e-01 -0.0864 0.0872 0.632 MAIT L2
ENSG00000059758 CDK17 96330 sc-eQTL 2.15e-02 0.129 0.0555 0.629 NK_CD56bright L2
ENSG00000111144 LTA4H 453290 sc-eQTL 6.20e-01 -0.0413 0.0832 0.629 NK_CD56bright L2
ENSG00000111145 ELK3 302435 sc-eQTL 5.98e-01 -0.0466 0.0882 0.629 NK_CD56bright L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.39e-01 0.137 0.0919 0.629 NK_CD56bright L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 1.17e-01 0.146 0.0926 0.629 NK_CD56bright L2
ENSG00000059758 CDK17 96330 sc-eQTL 9.52e-02 0.0781 0.0466 0.636 NK_CD56dim L2
ENSG00000111144 LTA4H 453290 sc-eQTL 7.78e-01 0.0239 0.0847 0.636 NK_CD56dim L2
ENSG00000111145 ELK3 302435 sc-eQTL 5.66e-01 0.0431 0.075 0.636 NK_CD56dim L2
ENSG00000139343 SNRPF 637882 sc-eQTL 8.09e-02 -0.124 0.0709 0.636 NK_CD56dim L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.53e-01 -0.037 0.0822 0.636 NK_CD56dim L2
ENSG00000059758 CDK17 96330 sc-eQTL 6.05e-01 0.0388 0.0748 0.637 NK_HLA L2
ENSG00000111144 LTA4H 453290 sc-eQTL 2.68e-01 -0.109 0.0978 0.637 NK_HLA L2
ENSG00000111145 ELK3 302435 sc-eQTL 4.85e-01 -0.0636 0.0909 0.637 NK_HLA L2
ENSG00000139343 SNRPF 637882 sc-eQTL 2.62e-01 0.106 0.0946 0.637 NK_HLA L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 9.68e-01 0.0036 0.0898 0.637 NK_HLA L2
ENSG00000059758 CDK17 96330 sc-eQTL 7.14e-02 0.093 0.0513 0.636 NK_cytokine L2
ENSG00000111144 LTA4H 453290 sc-eQTL 4.99e-01 -0.0591 0.0874 0.636 NK_cytokine L2
ENSG00000111145 ELK3 302435 sc-eQTL 8.64e-01 -0.0144 0.0838 0.636 NK_cytokine L2
ENSG00000139343 SNRPF 637882 sc-eQTL 7.61e-01 0.0216 0.0709 0.636 NK_cytokine L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 5.75e-01 0.0493 0.0877 0.636 NK_cytokine L2
ENSG00000059758 CDK17 96330 sc-eQTL 8.23e-01 -0.0221 0.0981 0.641 PB L2
ENSG00000111144 LTA4H 453290 sc-eQTL 3.16e-01 -0.0868 0.0862 0.641 PB L2
ENSG00000111145 ELK3 302435 sc-eQTL 9.16e-01 -0.0117 0.111 0.641 PB L2
ENSG00000136014 USP44 945334 sc-eQTL 2.66e-01 0.114 0.102 0.641 PB L2
ENSG00000139343 SNRPF 637882 sc-eQTL 3.81e-01 -0.095 0.108 0.641 PB L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.49e-01 -0.0586 0.129 0.641 PB L2
ENSG00000059758 CDK17 96330 sc-eQTL 8.59e-01 0.0102 0.0572 0.628 Pro_T L2
ENSG00000074527 NTN4 705658 sc-eQTL 7.73e-02 -0.113 0.0637 0.628 Pro_T L2
ENSG00000111144 LTA4H 453290 sc-eQTL 9.04e-01 0.00912 0.0755 0.628 Pro_T L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.74e-01 -0.0812 0.0911 0.628 Pro_T L2
ENSG00000139343 SNRPF 637882 sc-eQTL 7.15e-01 -0.021 0.0576 0.628 Pro_T L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 3.69e-01 0.0751 0.0835 0.628 Pro_T L2
ENSG00000188596 CFAP54 7239 sc-eQTL 6.47e-01 0.031 0.0676 0.628 Pro_T L2
ENSG00000059758 CDK17 96330 sc-eQTL 7.82e-01 -0.0173 0.0625 0.632 Treg L2
ENSG00000111144 LTA4H 453290 sc-eQTL 8.86e-01 0.0114 0.0792 0.632 Treg L2
ENSG00000111145 ELK3 302435 sc-eQTL 5.48e-01 -0.0431 0.0717 0.632 Treg L2
ENSG00000136014 USP44 945334 sc-eQTL 4.29e-01 0.0638 0.0804 0.632 Treg L2
ENSG00000139343 SNRPF 637882 sc-eQTL 1.43e-01 0.122 0.0826 0.632 Treg L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 3.17e-01 0.0928 0.0925 0.632 Treg L2
ENSG00000059758 CDK17 96330 sc-eQTL 3.16e-01 0.0773 0.0768 0.624 cDC L2
ENSG00000084110 HAL 500445 sc-eQTL 3.76e-01 -0.0708 0.0799 0.624 cDC L2
ENSG00000111144 LTA4H 453290 sc-eQTL 1.27e-01 0.105 0.0682 0.624 cDC L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.73e-02 -0.188 0.0895 0.624 cDC L2
ENSG00000139343 SNRPF 637882 sc-eQTL 3.10e-01 0.077 0.0756 0.624 cDC L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 7.97e-01 -0.0238 0.0924 0.624 cDC L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 9.06e-01 0.00921 0.0779 0.624 cDC L2
ENSG00000059758 CDK17 96330 sc-eQTL 4.02e-01 -0.0559 0.0665 0.632 cMono_IL1B L2
ENSG00000084110 HAL 500445 sc-eQTL 3.27e-01 -0.0712 0.0724 0.632 cMono_IL1B L2
ENSG00000111144 LTA4H 453290 sc-eQTL 6.65e-01 0.034 0.0784 0.632 cMono_IL1B L2
ENSG00000111145 ELK3 302435 sc-eQTL 1.05e-01 -0.0978 0.0601 0.632 cMono_IL1B L2
ENSG00000139343 SNRPF 637882 sc-eQTL 4.52e-01 -0.0469 0.0623 0.632 cMono_IL1B L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 1.75e-01 -0.116 0.0855 0.632 cMono_IL1B L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 6.93e-01 0.0316 0.0801 0.632 cMono_IL1B L2
ENSG00000059758 CDK17 96330 sc-eQTL 4.59e-01 -0.0561 0.0756 0.632 cMono_S100A L2
ENSG00000084110 HAL 500445 sc-eQTL 4.72e-01 0.0611 0.0848 0.632 cMono_S100A L2
ENSG00000111144 LTA4H 453290 sc-eQTL 9.75e-01 -0.00271 0.0848 0.632 cMono_S100A L2
ENSG00000111145 ELK3 302435 sc-eQTL 3.11e-01 0.07 0.0689 0.632 cMono_S100A L2
ENSG00000139343 SNRPF 637882 sc-eQTL 8.00e-01 -0.0173 0.0683 0.632 cMono_S100A L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.99e-01 0.0357 0.0921 0.632 cMono_S100A L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 8.95e-01 -0.0114 0.0868 0.632 cMono_S100A L2
ENSG00000059758 CDK17 96330 sc-eQTL 3.88e-01 0.0638 0.0737 0.621 gdT L2
ENSG00000074527 NTN4 705658 sc-eQTL 7.87e-01 0.023 0.0848 0.621 gdT L2
ENSG00000111144 LTA4H 453290 sc-eQTL 7.92e-01 -0.0292 0.111 0.621 gdT L2
ENSG00000111145 ELK3 302435 sc-eQTL 5.04e-01 -0.0685 0.102 0.621 gdT L2
ENSG00000139343 SNRPF 637882 sc-eQTL 9.89e-01 0.0014 0.0988 0.621 gdT L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 3.17e-01 -0.109 0.109 0.621 gdT L2
ENSG00000188596 CFAP54 7239 sc-eQTL 2.21e-01 0.117 0.0951 0.621 gdT L2
ENSG00000059758 CDK17 96330 sc-eQTL 1.91e-01 -0.11 0.0836 0.624 intMono L2
ENSG00000084110 HAL 500445 sc-eQTL 5.14e-01 0.0555 0.0848 0.624 intMono L2
ENSG00000111144 LTA4H 453290 sc-eQTL 7.45e-01 -0.0283 0.087 0.624 intMono L2
ENSG00000111145 ELK3 302435 sc-eQTL 2.36e-01 0.0918 0.0773 0.624 intMono L2
ENSG00000139343 SNRPF 637882 sc-eQTL 3.13e-01 -0.0836 0.0827 0.624 intMono L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.98e-01 -0.0334 0.0861 0.624 intMono L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 4.89e-01 0.06 0.0865 0.624 intMono L2
ENSG00000059758 CDK17 96330 sc-eQTL 4.75e-01 0.0481 0.0672 0.622 ncMono L2
ENSG00000084110 HAL 500445 sc-eQTL 2.64e-01 -0.084 0.0749 0.622 ncMono L2
ENSG00000111144 LTA4H 453290 sc-eQTL 4.41e-01 -0.0646 0.0837 0.622 ncMono L2
ENSG00000111145 ELK3 302435 sc-eQTL 2.61e-01 0.0808 0.0717 0.622 ncMono L2
ENSG00000139343 SNRPF 637882 sc-eQTL 3.06e-01 -0.0752 0.0733 0.622 ncMono L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 6.39e-01 0.0367 0.078 0.622 ncMono L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 4.74e-01 -0.0638 0.089 0.622 ncMono L2
ENSG00000059758 CDK17 96330 sc-eQTL 3.77e-01 -0.0781 0.0883 0.63 pDC L2
ENSG00000084110 HAL 500445 sc-eQTL 7.21e-01 -0.0268 0.0747 0.63 pDC L2
ENSG00000111144 LTA4H 453290 sc-eQTL 8.97e-02 0.142 0.0829 0.63 pDC L2
ENSG00000111145 ELK3 302435 sc-eQTL 6.88e-01 -0.0411 0.102 0.63 pDC L2
ENSG00000139343 SNRPF 637882 sc-eQTL 8.05e-01 -0.0221 0.0893 0.63 pDC L2
ENSG00000139350 NEDD1 -410413 sc-eQTL 5.50e-01 -0.059 0.0984 0.63 pDC L2
ENSG00000257715 AC007298.1 471487 sc-eQTL 6.03e-01 0.0439 0.0844 0.63 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 96330 sc-eQTL 3.41e-01 0.0571 0.0597 0.632 B_Memory LOneK1K
ENSG00000111144 LTA4H 453290 sc-eQTL 7.20e-01 0.0223 0.0621 0.632 B_Memory LOneK1K
ENSG00000111145 ELK3 302435 sc-eQTL 4.46e-01 -0.0542 0.0709 0.632 B_Memory LOneK1K
ENSG00000136014 USP44 945334 sc-eQTL 2.09e-02 -0.203 0.0874 0.632 B_Memory LOneK1K
ENSG00000139343 SNRPF 637882 sc-eQTL 4.26e-01 -0.0549 0.0687 0.632 B_Memory LOneK1K
ENSG00000139350 NEDD1 -410413 sc-eQTL 4.71e-01 0.0651 0.0902 0.632 B_Memory LOneK1K
ENSG00000059758 CDK17 96330 sc-eQTL 8.55e-01 0.00935 0.0512 0.632 B_Naive LOneK1K
ENSG00000111144 LTA4H 453290 sc-eQTL 6.12e-01 0.0292 0.0575 0.632 B_Naive LOneK1K
ENSG00000111145 ELK3 302435 sc-eQTL 9.81e-01 -0.00158 0.0655 0.632 B_Naive LOneK1K
ENSG00000136014 USP44 945334 sc-eQTL 6.42e-02 -0.148 0.0794 0.632 B_Naive LOneK1K
ENSG00000139343 SNRPF 637882 sc-eQTL 4.22e-02 0.133 0.0653 0.632 B_Naive LOneK1K
ENSG00000139350 NEDD1 -410413 sc-eQTL 1.13e-01 -0.138 0.0867 0.632 B_Naive LOneK1K
ENSG00000059758 CDK17 96330 sc-eQTL 3.54e-01 -0.0556 0.0599 0.632 CD14_Mono LOneK1K
ENSG00000084110 HAL 500445 sc-eQTL 6.58e-01 -0.0322 0.0726 0.632 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 453290 sc-eQTL 8.12e-01 0.019 0.0798 0.632 CD14_Mono LOneK1K
ENSG00000111145 ELK3 302435 sc-eQTL 7.83e-01 -0.0159 0.0576 0.632 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 637882 sc-eQTL 4.53e-01 -0.0418 0.0555 0.632 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -410413 sc-eQTL 4.80e-01 -0.0617 0.0871 0.632 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 471487 sc-eQTL 8.77e-01 0.0125 0.0808 0.632 CD14_Mono LOneK1K
ENSG00000059758 CDK17 96330 sc-eQTL 5.78e-01 -0.0344 0.0618 0.631 CD16_Mono LOneK1K
ENSG00000084110 HAL 500445 sc-eQTL 6.56e-01 -0.0325 0.073 0.631 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 453290 sc-eQTL 6.19e-01 -0.0403 0.081 0.631 CD16_Mono LOneK1K
ENSG00000111145 ELK3 302435 sc-eQTL 5.69e-01 0.0341 0.0599 0.631 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 637882 sc-eQTL 1.50e-01 -0.0889 0.0615 0.631 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -410413 sc-eQTL 9.14e-01 -0.00856 0.0793 0.631 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 471487 sc-eQTL 7.06e-01 -0.0317 0.0839 0.631 CD16_Mono LOneK1K
ENSG00000059758 CDK17 96330 sc-eQTL 8.15e-02 0.0766 0.0438 0.636 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 453290 sc-eQTL 4.55e-01 -0.0573 0.0766 0.636 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 302435 sc-eQTL 9.57e-01 0.00375 0.0702 0.636 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 637882 sc-eQTL 3.02e-01 -0.0619 0.0599 0.636 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -410413 sc-eQTL 8.45e-01 -0.0147 0.0749 0.636 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139343 SNRPF 637882 eQTL 0.033 0.02 0.00939 0.0 0.0 0.363
ENSG00000139350 NEDD1 -410413 eQTL 1.94e-05 -0.107 0.025 0.0 0.0 0.363
ENSG00000188596 CFAP54 7235 eQTL 0.00184 -0.0653 0.0209 0.0 0.0 0.363

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -410413 8.43e-07 4.63e-07 9.16e-08 3.58e-07 1.1e-07 1.74e-07 4.53e-07 9.91e-08 3.51e-07 2.06e-07 4.64e-07 3.11e-07 6.27e-07 1.07e-07 1.48e-07 2e-07 2.07e-07 3.56e-07 1.51e-07 1.17e-07 1.87e-07 2.99e-07 3.07e-07 1.19e-07 6.59e-07 2.46e-07 2.24e-07 2.19e-07 2.78e-07 3.93e-07 2.43e-07 7.03e-08 5.77e-08 1.16e-07 3e-07 7.86e-08 1.1e-07 7.98e-08 4.23e-08 5.12e-08 8.29e-08 4.35e-07 2.63e-08 1.88e-08 1.16e-07 1.88e-08 8.75e-08 1.15e-08 5.35e-08
ENSG00000188596 CFAP54 7235 2.13e-05 2.36e-05 5.6e-06 1.35e-05 4.49e-06 1.17e-05 3.36e-05 3.66e-06 2.07e-05 1.04e-05 2.82e-05 1.14e-05 3.91e-05 1.02e-05 5.59e-06 1.39e-05 1.36e-05 2.03e-05 7.36e-06 7.07e-06 1.25e-05 2.43e-05 2.39e-05 9.82e-06 3.51e-05 6.28e-06 9.71e-06 9.09e-06 2.52e-05 3.48e-05 1.41e-05 1.63e-06 2.8e-06 7.48e-06 9.92e-06 6.2e-06 3.65e-06 3.26e-06 5.45e-06 3.85e-06 1.8e-06 2.95e-05 2.88e-06 4.23e-07 2.45e-06 3.29e-06 3.59e-06 1.58e-06 1.5e-06