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Genes within 1Mb (chr12:96485528:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 85048 sc-eQTL 9.00e-01 -0.00633 0.0505 0.705 B L1
ENSG00000111144 LTA4H 442008 sc-eQTL 2.28e-01 0.0756 0.0626 0.705 B L1
ENSG00000111145 ELK3 291153 sc-eQTL 5.39e-01 -0.0411 0.0668 0.705 B L1
ENSG00000136014 USP44 934052 sc-eQTL 9.82e-04 -0.268 0.0803 0.705 B L1
ENSG00000139343 SNRPF 626600 sc-eQTL 6.34e-01 0.029 0.0607 0.705 B L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.34e-02 -0.158 0.088 0.705 B L1
ENSG00000059758 CDK17 85048 sc-eQTL 4.92e-01 -0.0286 0.0415 0.705 CD4T L1
ENSG00000111144 LTA4H 442008 sc-eQTL 3.65e-01 -0.0517 0.057 0.705 CD4T L1
ENSG00000111145 ELK3 291153 sc-eQTL 6.00e-01 -0.0324 0.0618 0.705 CD4T L1
ENSG00000136014 USP44 934052 sc-eQTL 8.11e-02 0.154 0.0876 0.705 CD4T L1
ENSG00000139343 SNRPF 626600 sc-eQTL 5.61e-01 -0.0314 0.054 0.705 CD4T L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 6.75e-01 -0.0279 0.0666 0.705 CD4T L1
ENSG00000059758 CDK17 85048 sc-eQTL 6.98e-01 -0.0166 0.0428 0.705 CD8T L1
ENSG00000111144 LTA4H 442008 sc-eQTL 6.71e-01 -0.0195 0.0459 0.705 CD8T L1
ENSG00000111145 ELK3 291153 sc-eQTL 5.67e-01 -0.0396 0.0691 0.705 CD8T L1
ENSG00000136014 USP44 934052 sc-eQTL 2.82e-01 0.0846 0.0784 0.705 CD8T L1
ENSG00000139343 SNRPF 626600 sc-eQTL 1.00e-01 0.0929 0.0563 0.705 CD8T L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.38e-01 -0.0585 0.0752 0.705 CD8T L1
ENSG00000059758 CDK17 85048 sc-eQTL 9.73e-01 -0.00268 0.0798 0.7 DC L1
ENSG00000084110 HAL 489163 sc-eQTL 5.72e-01 -0.0513 0.0907 0.7 DC L1
ENSG00000111144 LTA4H 442008 sc-eQTL 1.62e-01 0.104 0.0739 0.7 DC L1
ENSG00000111145 ELK3 291153 sc-eQTL 7.82e-02 -0.16 0.0902 0.7 DC L1
ENSG00000139343 SNRPF 626600 sc-eQTL 2.19e-01 0.0929 0.0753 0.7 DC L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 3.65e-01 -0.088 0.0969 0.7 DC L1
ENSG00000257715 AC007298.1 460205 sc-eQTL 6.01e-01 -0.0459 0.0876 0.7 DC L1
ENSG00000059758 CDK17 85048 sc-eQTL 3.24e-01 -0.0634 0.0642 0.705 Mono L1
ENSG00000084110 HAL 489163 sc-eQTL 7.65e-01 0.0242 0.081 0.705 Mono L1
ENSG00000111144 LTA4H 442008 sc-eQTL 7.81e-02 0.161 0.0908 0.705 Mono L1
ENSG00000111145 ELK3 291153 sc-eQTL 4.89e-01 -0.0425 0.0614 0.705 Mono L1
ENSG00000139343 SNRPF 626600 sc-eQTL 5.52e-01 -0.0345 0.0579 0.705 Mono L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.46e-01 -0.129 0.0885 0.705 Mono L1
ENSG00000257715 AC007298.1 460205 sc-eQTL 1.40e-01 0.127 0.0858 0.705 Mono L1
ENSG00000059758 CDK17 85048 sc-eQTL 1.16e-02 0.121 0.0476 0.706 NK L1
ENSG00000111144 LTA4H 442008 sc-eQTL 2.87e-01 -0.0873 0.0817 0.706 NK L1
ENSG00000111145 ELK3 291153 sc-eQTL 9.18e-01 -0.008 0.0777 0.706 NK L1
ENSG00000139343 SNRPF 626600 sc-eQTL 5.04e-01 0.0431 0.0644 0.706 NK L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.62e-01 -0.06 0.0815 0.706 NK L1
ENSG00000059758 CDK17 85048 sc-eQTL 8.23e-02 0.0701 0.0401 0.705 Other_T L1
ENSG00000074527 NTN4 694376 sc-eQTL 5.16e-01 -0.0486 0.0747 0.705 Other_T L1
ENSG00000111144 LTA4H 442008 sc-eQTL 5.94e-01 -0.0451 0.0844 0.705 Other_T L1
ENSG00000111145 ELK3 291153 sc-eQTL 8.68e-01 -0.011 0.0659 0.705 Other_T L1
ENSG00000139343 SNRPF 626600 sc-eQTL 6.10e-01 0.0313 0.0612 0.705 Other_T L1
ENSG00000139350 NEDD1 -421695 sc-eQTL 3.88e-01 -0.0806 0.0931 0.705 Other_T L1
ENSG00000188596 CFAP54 -4043 sc-eQTL 5.71e-01 0.0548 0.0965 0.705 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 85048 sc-eQTL 6.74e-01 0.0394 0.0935 0.704 B_Activated L2
ENSG00000111144 LTA4H 442008 sc-eQTL 1.30e-01 0.16 0.105 0.704 B_Activated L2
ENSG00000111145 ELK3 291153 sc-eQTL 2.86e-01 0.12 0.112 0.704 B_Activated L2
ENSG00000136014 USP44 934052 sc-eQTL 1.96e-01 0.111 0.0857 0.704 B_Activated L2
ENSG00000139343 SNRPF 626600 sc-eQTL 2.14e-01 0.131 0.105 0.704 B_Activated L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.45e-01 -0.0844 0.11 0.704 B_Activated L2
ENSG00000059758 CDK17 85048 sc-eQTL 1.39e-01 0.117 0.0792 0.704 B_Intermediate L2
ENSG00000111144 LTA4H 442008 sc-eQTL 1.81e-01 0.103 0.0767 0.704 B_Intermediate L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.60e-02 -0.144 0.0863 0.704 B_Intermediate L2
ENSG00000136014 USP44 934052 sc-eQTL 2.33e-03 -0.309 0.1 0.704 B_Intermediate L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.76e-01 -0.0484 0.0865 0.704 B_Intermediate L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.39e-01 0.0623 0.101 0.704 B_Intermediate L2
ENSG00000059758 CDK17 85048 sc-eQTL 9.94e-01 -0.000622 0.078 0.709 B_Memory L2
ENSG00000111144 LTA4H 442008 sc-eQTL 6.38e-01 -0.0424 0.0899 0.709 B_Memory L2
ENSG00000111145 ELK3 291153 sc-eQTL 8.55e-01 0.0162 0.0885 0.709 B_Memory L2
ENSG00000136014 USP44 934052 sc-eQTL 1.97e-02 -0.225 0.0958 0.709 B_Memory L2
ENSG00000139343 SNRPF 626600 sc-eQTL 9.52e-01 0.00568 0.0938 0.709 B_Memory L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.72e-02 0.197 0.103 0.709 B_Memory L2
ENSG00000059758 CDK17 85048 sc-eQTL 6.13e-01 -0.0322 0.0636 0.705 B_Naive1 L2
ENSG00000111144 LTA4H 442008 sc-eQTL 4.45e-01 0.0509 0.0665 0.705 B_Naive1 L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.69e-01 0.0337 0.0787 0.705 B_Naive1 L2
ENSG00000136014 USP44 934052 sc-eQTL 1.24e-02 -0.246 0.0975 0.705 B_Naive1 L2
ENSG00000139343 SNRPF 626600 sc-eQTL 3.22e-02 0.163 0.0758 0.705 B_Naive1 L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.94e-01 -0.0524 0.0982 0.705 B_Naive1 L2
ENSG00000059758 CDK17 85048 sc-eQTL 9.40e-01 0.00617 0.0814 0.706 B_Naive2 L2
ENSG00000111144 LTA4H 442008 sc-eQTL 7.80e-01 0.0216 0.0771 0.706 B_Naive2 L2
ENSG00000111145 ELK3 291153 sc-eQTL 5.77e-01 -0.0507 0.0909 0.706 B_Naive2 L2
ENSG00000136014 USP44 934052 sc-eQTL 5.75e-01 -0.0551 0.0982 0.706 B_Naive2 L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.50e-01 0.054 0.0902 0.706 B_Naive2 L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.17e-02 -0.269 0.106 0.706 B_Naive2 L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.69e-01 0.0121 0.0735 0.711 CD4_CTL L2
ENSG00000111144 LTA4H 442008 sc-eQTL 4.78e-02 -0.204 0.103 0.711 CD4_CTL L2
ENSG00000111145 ELK3 291153 sc-eQTL 5.50e-01 0.0628 0.105 0.711 CD4_CTL L2
ENSG00000136014 USP44 934052 sc-eQTL 7.05e-01 0.0317 0.0837 0.711 CD4_CTL L2
ENSG00000139343 SNRPF 626600 sc-eQTL 9.61e-01 0.00444 0.0912 0.711 CD4_CTL L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.61e-02 -0.187 0.105 0.711 CD4_CTL L2
ENSG00000059758 CDK17 85048 sc-eQTL 3.08e-01 -0.0464 0.0454 0.705 CD4_Naive L2
ENSG00000111144 LTA4H 442008 sc-eQTL 2.59e-01 -0.0743 0.0656 0.705 CD4_Naive L2
ENSG00000111145 ELK3 291153 sc-eQTL 4.36e-01 -0.0514 0.0658 0.705 CD4_Naive L2
ENSG00000136014 USP44 934052 sc-eQTL 3.52e-02 0.194 0.0913 0.705 CD4_Naive L2
ENSG00000139343 SNRPF 626600 sc-eQTL 9.10e-01 -0.00666 0.0585 0.705 CD4_Naive L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.07e-01 -0.0598 0.0719 0.705 CD4_Naive L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.76e-01 -0.00696 0.0447 0.705 CD4_TCM L2
ENSG00000111144 LTA4H 442008 sc-eQTL 1.63e-01 -0.106 0.0754 0.705 CD4_TCM L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.90e-01 0.0298 0.0745 0.705 CD4_TCM L2
ENSG00000136014 USP44 934052 sc-eQTL 8.25e-01 0.0229 0.103 0.705 CD4_TCM L2
ENSG00000139343 SNRPF 626600 sc-eQTL 1.90e-01 -0.08 0.0609 0.705 CD4_TCM L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.60e-01 0.0617 0.0834 0.705 CD4_TCM L2
ENSG00000059758 CDK17 85048 sc-eQTL 3.30e-01 0.0539 0.0552 0.705 CD4_TEM L2
ENSG00000111144 LTA4H 442008 sc-eQTL 4.46e-01 0.0651 0.0853 0.705 CD4_TEM L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.67e-01 -0.00324 0.0794 0.705 CD4_TEM L2
ENSG00000136014 USP44 934052 sc-eQTL 4.91e-01 0.0673 0.0976 0.705 CD4_TEM L2
ENSG00000139343 SNRPF 626600 sc-eQTL 2.81e-01 -0.0897 0.0829 0.705 CD4_TEM L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.03e-01 -0.0661 0.0984 0.705 CD4_TEM L2
ENSG00000059758 CDK17 85048 sc-eQTL 7.89e-02 0.094 0.0533 0.705 CD8_CTL L2
ENSG00000111144 LTA4H 442008 sc-eQTL 7.87e-01 0.0262 0.0969 0.705 CD8_CTL L2
ENSG00000111145 ELK3 291153 sc-eQTL 5.56e-01 0.052 0.0881 0.705 CD8_CTL L2
ENSG00000136014 USP44 934052 sc-eQTL 4.45e-01 0.0752 0.0982 0.705 CD8_CTL L2
ENSG00000139343 SNRPF 626600 sc-eQTL 4.87e-01 0.0564 0.081 0.705 CD8_CTL L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.90e-02 -0.178 0.0901 0.705 CD8_CTL L2
ENSG00000059758 CDK17 85048 sc-eQTL 4.65e-01 -0.0473 0.0647 0.705 CD8_Naive L2
ENSG00000111144 LTA4H 442008 sc-eQTL 6.00e-01 -0.0407 0.0775 0.705 CD8_Naive L2
ENSG00000111145 ELK3 291153 sc-eQTL 4.51e-01 -0.0619 0.082 0.705 CD8_Naive L2
ENSG00000136014 USP44 934052 sc-eQTL 2.61e-01 0.0969 0.0859 0.705 CD8_Naive L2
ENSG00000139343 SNRPF 626600 sc-eQTL 8.16e-02 0.128 0.0733 0.705 CD8_Naive L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 6.89e-01 0.0352 0.0878 0.705 CD8_Naive L2
ENSG00000059758 CDK17 85048 sc-eQTL 4.03e-01 0.0579 0.069 0.699 CD8_TCM L2
ENSG00000111144 LTA4H 442008 sc-eQTL 9.54e-02 -0.169 0.101 0.699 CD8_TCM L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.60e-01 -0.00428 0.0861 0.699 CD8_TCM L2
ENSG00000136014 USP44 934052 sc-eQTL 2.76e-01 -0.102 0.0929 0.699 CD8_TCM L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.47e-01 0.0597 0.099 0.699 CD8_TCM L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.91e-01 -0.0257 0.097 0.699 CD8_TCM L2
ENSG00000059758 CDK17 85048 sc-eQTL 7.53e-01 -0.0283 0.0896 0.705 CD8_TEM L2
ENSG00000111144 LTA4H 442008 sc-eQTL 6.94e-01 0.0433 0.11 0.705 CD8_TEM L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.95e-01 -0.000656 0.108 0.705 CD8_TEM L2
ENSG00000136014 USP44 934052 sc-eQTL 9.18e-01 -0.00941 0.0918 0.705 CD8_TEM L2
ENSG00000139343 SNRPF 626600 sc-eQTL 9.62e-01 -0.00472 0.1 0.705 CD8_TEM L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 9.41e-01 -0.00805 0.109 0.705 CD8_TEM L2
ENSG00000059758 CDK17 85048 sc-eQTL 6.80e-01 -0.024 0.0582 0.706 MAIT L2
ENSG00000074527 NTN4 694376 sc-eQTL 6.57e-01 -0.0349 0.0784 0.706 MAIT L2
ENSG00000111144 LTA4H 442008 sc-eQTL 2.79e-01 -0.0974 0.0897 0.706 MAIT L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.77e-01 0.00218 0.0755 0.706 MAIT L2
ENSG00000139343 SNRPF 626600 sc-eQTL 8.03e-01 -0.0219 0.0875 0.706 MAIT L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 8.73e-01 -0.0158 0.0982 0.706 MAIT L2
ENSG00000188596 CFAP54 -4043 sc-eQTL 8.76e-01 -0.0152 0.0973 0.706 MAIT L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.41e-03 0.165 0.0618 0.702 NK_CD56bright L2
ENSG00000111144 LTA4H 442008 sc-eQTL 9.12e-01 -0.0103 0.093 0.702 NK_CD56bright L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.70e-01 -0.0421 0.0987 0.702 NK_CD56bright L2
ENSG00000139343 SNRPF 626600 sc-eQTL 8.64e-03 0.269 0.102 0.702 NK_CD56bright L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.75e-01 0.141 0.104 0.702 NK_CD56bright L2
ENSG00000059758 CDK17 85048 sc-eQTL 1.21e-01 0.0809 0.0519 0.707 NK_CD56dim L2
ENSG00000111144 LTA4H 442008 sc-eQTL 7.72e-01 -0.0274 0.0943 0.707 NK_CD56dim L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.46e-01 0.0383 0.0834 0.707 NK_CD56dim L2
ENSG00000139343 SNRPF 626600 sc-eQTL 3.57e-01 -0.0732 0.0793 0.707 NK_CD56dim L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.78e-01 -0.123 0.0911 0.707 NK_CD56dim L2
ENSG00000059758 CDK17 85048 sc-eQTL 4.07e-01 0.0686 0.0826 0.705 NK_HLA L2
ENSG00000111144 LTA4H 442008 sc-eQTL 8.08e-01 -0.0264 0.108 0.705 NK_HLA L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.98e-01 -0.0391 0.101 0.705 NK_HLA L2
ENSG00000139343 SNRPF 626600 sc-eQTL 4.20e-01 0.0845 0.105 0.705 NK_HLA L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.70e-01 -0.029 0.0992 0.705 NK_HLA L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.69e-02 0.098 0.057 0.707 NK_cytokine L2
ENSG00000111144 LTA4H 442008 sc-eQTL 6.00e-01 -0.0509 0.0969 0.707 NK_cytokine L2
ENSG00000111145 ELK3 291153 sc-eQTL 3.48e-01 -0.0872 0.0927 0.707 NK_cytokine L2
ENSG00000139343 SNRPF 626600 sc-eQTL 1.90e-01 0.103 0.0783 0.707 NK_cytokine L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.86e-01 0.0264 0.0972 0.707 NK_cytokine L2
ENSG00000059758 CDK17 85048 sc-eQTL 1.30e-01 -0.167 0.11 0.722 PB L2
ENSG00000111144 LTA4H 442008 sc-eQTL 8.33e-01 -0.0206 0.0978 0.722 PB L2
ENSG00000111145 ELK3 291153 sc-eQTL 9.74e-01 0.00413 0.125 0.722 PB L2
ENSG00000136014 USP44 934052 sc-eQTL 8.49e-01 0.0221 0.116 0.722 PB L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.64e-01 -0.0705 0.122 0.722 PB L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.47e-01 -0.047 0.145 0.722 PB L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.83e-01 0.00932 0.0635 0.702 Pro_T L2
ENSG00000074527 NTN4 694376 sc-eQTL 1.47e-01 -0.103 0.071 0.702 Pro_T L2
ENSG00000111144 LTA4H 442008 sc-eQTL 5.49e-01 0.0502 0.0838 0.702 Pro_T L2
ENSG00000111145 ELK3 291153 sc-eQTL 5.40e-01 -0.0622 0.101 0.702 Pro_T L2
ENSG00000139343 SNRPF 626600 sc-eQTL 8.06e-01 -0.0158 0.064 0.702 Pro_T L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 6.34e-01 0.0443 0.0929 0.702 Pro_T L2
ENSG00000188596 CFAP54 -4043 sc-eQTL 8.57e-01 0.0136 0.0751 0.702 Pro_T L2
ENSG00000059758 CDK17 85048 sc-eQTL 8.07e-01 0.017 0.0695 0.705 Treg L2
ENSG00000111144 LTA4H 442008 sc-eQTL 3.27e-01 -0.0863 0.0879 0.705 Treg L2
ENSG00000111145 ELK3 291153 sc-eQTL 7.47e-01 0.0258 0.0798 0.705 Treg L2
ENSG00000136014 USP44 934052 sc-eQTL 5.73e-01 0.0505 0.0895 0.705 Treg L2
ENSG00000139343 SNRPF 626600 sc-eQTL 1.07e-01 0.149 0.0918 0.705 Treg L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.07e-01 0.0685 0.103 0.705 Treg L2
ENSG00000059758 CDK17 85048 sc-eQTL 2.89e-01 0.0906 0.0853 0.698 cDC L2
ENSG00000084110 HAL 489163 sc-eQTL 6.09e-01 -0.0455 0.0889 0.698 cDC L2
ENSG00000111144 LTA4H 442008 sc-eQTL 1.18e-01 0.119 0.0757 0.698 cDC L2
ENSG00000111145 ELK3 291153 sc-eQTL 1.64e-01 -0.14 0.1 0.698 cDC L2
ENSG00000139343 SNRPF 626600 sc-eQTL 4.38e-01 0.0654 0.0841 0.698 cDC L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.51e-01 -0.0775 0.102 0.698 cDC L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 7.76e-01 0.0246 0.0865 0.698 cDC L2
ENSG00000059758 CDK17 85048 sc-eQTL 9.42e-02 -0.124 0.0737 0.705 cMono_IL1B L2
ENSG00000084110 HAL 489163 sc-eQTL 9.02e-01 -0.01 0.0809 0.705 cMono_IL1B L2
ENSG00000111144 LTA4H 442008 sc-eQTL 3.67e-02 0.182 0.0865 0.705 cMono_IL1B L2
ENSG00000111145 ELK3 291153 sc-eQTL 7.86e-02 -0.118 0.0668 0.705 cMono_IL1B L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.26e-01 -0.044 0.0694 0.705 cMono_IL1B L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 2.18e-02 -0.218 0.0944 0.705 cMono_IL1B L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 1.18e-01 0.139 0.0887 0.705 cMono_IL1B L2
ENSG00000059758 CDK17 85048 sc-eQTL 3.40e-01 -0.0802 0.0839 0.705 cMono_S100A L2
ENSG00000084110 HAL 489163 sc-eQTL 1.23e-01 0.145 0.0938 0.705 cMono_S100A L2
ENSG00000111144 LTA4H 442008 sc-eQTL 2.34e-01 0.112 0.094 0.705 cMono_S100A L2
ENSG00000111145 ELK3 291153 sc-eQTL 5.22e-01 0.0492 0.0767 0.705 cMono_S100A L2
ENSG00000139343 SNRPF 626600 sc-eQTL 4.35e-01 -0.0593 0.0758 0.705 cMono_S100A L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 7.21e-01 -0.0367 0.102 0.705 cMono_S100A L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 6.65e-01 0.0418 0.0964 0.705 cMono_S100A L2
ENSG00000059758 CDK17 85048 sc-eQTL 2.12e-01 0.104 0.083 0.694 gdT L2
ENSG00000074527 NTN4 694376 sc-eQTL 7.37e-01 0.0322 0.0957 0.694 gdT L2
ENSG00000111144 LTA4H 442008 sc-eQTL 7.63e-01 0.0376 0.125 0.694 gdT L2
ENSG00000111145 ELK3 291153 sc-eQTL 6.79e-01 -0.0478 0.115 0.694 gdT L2
ENSG00000139343 SNRPF 626600 sc-eQTL 3.85e-01 0.097 0.111 0.694 gdT L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.88e-01 0.0667 0.123 0.694 gdT L2
ENSG00000188596 CFAP54 -4043 sc-eQTL 1.03e-01 0.175 0.107 0.694 gdT L2
ENSG00000059758 CDK17 85048 sc-eQTL 1.37e-01 -0.139 0.0935 0.7 intMono L2
ENSG00000084110 HAL 489163 sc-eQTL 1.69e-01 0.13 0.0946 0.7 intMono L2
ENSG00000111144 LTA4H 442008 sc-eQTL 4.01e-01 0.0819 0.0973 0.7 intMono L2
ENSG00000111145 ELK3 291153 sc-eQTL 4.00e-01 0.073 0.0867 0.7 intMono L2
ENSG00000139343 SNRPF 626600 sc-eQTL 5.77e-01 -0.0518 0.0927 0.7 intMono L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.81e-01 -0.0679 0.0963 0.7 intMono L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 4.07e-01 0.0804 0.0968 0.7 intMono L2
ENSG00000059758 CDK17 85048 sc-eQTL 6.22e-01 0.0371 0.0751 0.695 ncMono L2
ENSG00000084110 HAL 489163 sc-eQTL 2.39e-01 -0.0987 0.0836 0.695 ncMono L2
ENSG00000111144 LTA4H 442008 sc-eQTL 5.01e-01 0.063 0.0934 0.695 ncMono L2
ENSG00000111145 ELK3 291153 sc-eQTL 7.00e-01 0.0309 0.0803 0.695 ncMono L2
ENSG00000139343 SNRPF 626600 sc-eQTL 8.43e-01 -0.0163 0.082 0.695 ncMono L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 9.75e-01 0.00277 0.0871 0.695 ncMono L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 5.64e-01 0.0574 0.0993 0.695 ncMono L2
ENSG00000059758 CDK17 85048 sc-eQTL 2.30e-01 -0.117 0.0974 0.698 pDC L2
ENSG00000084110 HAL 489163 sc-eQTL 6.52e-01 0.0373 0.0826 0.698 pDC L2
ENSG00000111144 LTA4H 442008 sc-eQTL 9.53e-02 0.154 0.0917 0.698 pDC L2
ENSG00000111145 ELK3 291153 sc-eQTL 4.96e-01 -0.0771 0.113 0.698 pDC L2
ENSG00000139343 SNRPF 626600 sc-eQTL 6.69e-01 0.0423 0.0987 0.698 pDC L2
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.64e-01 -0.0798 0.109 0.698 pDC L2
ENSG00000257715 AC007298.1 460205 sc-eQTL 6.11e-01 0.0475 0.0934 0.698 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 85048 sc-eQTL 2.75e-01 0.0727 0.0664 0.705 B_Memory LOneK1K
ENSG00000111144 LTA4H 442008 sc-eQTL 3.11e-01 0.07 0.069 0.705 B_Memory LOneK1K
ENSG00000111145 ELK3 291153 sc-eQTL 3.52e-01 -0.0735 0.0788 0.705 B_Memory LOneK1K
ENSG00000136014 USP44 934052 sc-eQTL 8.24e-04 -0.325 0.0959 0.705 B_Memory LOneK1K
ENSG00000139343 SNRPF 626600 sc-eQTL 7.57e-01 -0.0237 0.0765 0.705 B_Memory LOneK1K
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.03e-01 0.163 0.0998 0.705 B_Memory LOneK1K
ENSG00000059758 CDK17 85048 sc-eQTL 7.63e-01 -0.0172 0.057 0.705 B_Naive LOneK1K
ENSG00000111144 LTA4H 442008 sc-eQTL 1.64e-01 0.0891 0.0637 0.705 B_Naive LOneK1K
ENSG00000111145 ELK3 291153 sc-eQTL 7.19e-01 -0.0263 0.0729 0.705 B_Naive LOneK1K
ENSG00000136014 USP44 934052 sc-eQTL 4.24e-02 -0.18 0.0882 0.705 B_Naive LOneK1K
ENSG00000139343 SNRPF 626600 sc-eQTL 1.39e-01 0.108 0.073 0.705 B_Naive LOneK1K
ENSG00000139350 NEDD1 -421695 sc-eQTL 5.09e-02 -0.189 0.0962 0.705 B_Naive LOneK1K
ENSG00000059758 CDK17 85048 sc-eQTL 7.43e-02 -0.119 0.0664 0.705 CD14_Mono LOneK1K
ENSG00000084110 HAL 489163 sc-eQTL 6.87e-01 0.0327 0.081 0.705 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 442008 sc-eQTL 8.33e-02 0.154 0.0884 0.705 CD14_Mono LOneK1K
ENSG00000111145 ELK3 291153 sc-eQTL 5.51e-01 -0.0384 0.0643 0.705 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 626600 sc-eQTL 4.93e-01 -0.0426 0.062 0.705 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -421695 sc-eQTL 1.20e-01 -0.151 0.0968 0.705 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 460205 sc-eQTL 1.98e-01 0.116 0.0898 0.705 CD14_Mono LOneK1K
ENSG00000059758 CDK17 85048 sc-eQTL 3.82e-01 -0.0606 0.0693 0.705 CD16_Mono LOneK1K
ENSG00000084110 HAL 489163 sc-eQTL 8.43e-01 -0.0163 0.082 0.705 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 442008 sc-eQTL 3.28e-01 0.0889 0.0908 0.705 CD16_Mono LOneK1K
ENSG00000111145 ELK3 291153 sc-eQTL 9.70e-01 0.00253 0.0673 0.705 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 626600 sc-eQTL 4.88e-01 -0.0481 0.0693 0.705 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -421695 sc-eQTL 3.96e-01 -0.0756 0.0889 0.705 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 460205 sc-eQTL 6.68e-01 0.0404 0.0942 0.705 CD16_Mono LOneK1K
ENSG00000059758 CDK17 85048 sc-eQTL 6.90e-02 0.0891 0.0488 0.707 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 442008 sc-eQTL 2.55e-01 -0.0973 0.0852 0.707 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 291153 sc-eQTL 7.16e-01 -0.0285 0.0782 0.707 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 626600 sc-eQTL 8.89e-01 -0.00934 0.0669 0.707 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -421695 sc-eQTL 4.06e-01 -0.0695 0.0833 0.707 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000059758 CDK17 85048 eQTL 1.43e-03 -0.0414 0.013 0.0039 0.00285 0.292
ENSG00000139350 NEDD1 -421695 eQTL 5.59e-13 -0.187 0.0256 0.0 0.0 0.292
ENSG00000188596 CFAP54 -4047 eQTL 0.000479 -0.0765 0.0218 0.0 0.0 0.292

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -421695 1.01e-06 6.42e-07 1.05e-07 4.43e-07 9.82e-08 1.85e-07 5.54e-07 1.03e-07 4.74e-07 2.34e-07 8.28e-07 3.91e-07 9.97e-07 1.57e-07 2.26e-07 2.36e-07 2.48e-07 3.73e-07 2.17e-07 1.82e-07 1.92e-07 3.71e-07 3.69e-07 1.63e-07 9.15e-07 2.42e-07 2.56e-07 2.98e-07 3.58e-07 5.99e-07 3.66e-07 5.71e-08 5.47e-08 1.71e-07 3.42e-07 1.48e-07 1.22e-07 7.64e-08 8.43e-08 1.83e-08 1.98e-07 7.7e-07 2.67e-08 1.05e-08 1.58e-07 1.27e-08 1.04e-07 1.2e-08 5.54e-08
ENSG00000188596 CFAP54 -4047 3.54e-05 3.18e-05 6.49e-06 1.59e-05 6.02e-06 1.48e-05 4.55e-05 4.69e-06 3.11e-05 1.53e-05 3.76e-05 1.77e-05 4.85e-05 1.4e-05 7.05e-06 1.94e-05 1.77e-05 2.59e-05 8.23e-06 7.35e-06 1.63e-05 3.34e-05 3.2e-05 1.01e-05 4.49e-05 8.26e-06 1.44e-05 1.29e-05 3.23e-05 3.04e-05 1.98e-05 1.67e-06 2.95e-06 7.83e-06 1.23e-05 6.4e-06 3.52e-06 3.27e-06 5.26e-06 3.6e-06 1.78e-06 3.81e-05 3.74e-06 4.43e-07 2.7e-06 4.25e-06 4.11e-06 1.66e-06 1.5e-06