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Genes within 1Mb (chr12:96482748:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 82268 sc-eQTL 1.04e-01 -0.0883 0.0541 0.78 B L1
ENSG00000111144 LTA4H 439228 sc-eQTL 2.85e-01 0.0723 0.0675 0.78 B L1
ENSG00000111145 ELK3 288373 sc-eQTL 3.16e-01 -0.0723 0.0719 0.78 B L1
ENSG00000136014 USP44 931272 sc-eQTL 2.33e-02 -0.2 0.0877 0.78 B L1
ENSG00000139343 SNRPF 623820 sc-eQTL 8.59e-01 -0.0116 0.0654 0.78 B L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.80e-01 -0.128 0.0951 0.78 B L1
ENSG00000059758 CDK17 82268 sc-eQTL 3.93e-02 -0.0913 0.044 0.78 CD4T L1
ENSG00000111144 LTA4H 439228 sc-eQTL 6.91e-01 -0.0243 0.0611 0.78 CD4T L1
ENSG00000111145 ELK3 288373 sc-eQTL 7.06e-01 0.0249 0.0661 0.78 CD4T L1
ENSG00000136014 USP44 931272 sc-eQTL 1.62e-01 0.132 0.0939 0.78 CD4T L1
ENSG00000139343 SNRPF 623820 sc-eQTL 3.30e-01 -0.0563 0.0577 0.78 CD4T L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.97e-01 0.0743 0.071 0.78 CD4T L1
ENSG00000059758 CDK17 82268 sc-eQTL 1.80e-02 -0.108 0.0453 0.78 CD8T L1
ENSG00000111144 LTA4H 439228 sc-eQTL 8.63e-01 0.00851 0.0492 0.78 CD8T L1
ENSG00000111145 ELK3 288373 sc-eQTL 9.90e-01 0.000922 0.0741 0.78 CD8T L1
ENSG00000136014 USP44 931272 sc-eQTL 3.52e-01 0.0785 0.0841 0.78 CD8T L1
ENSG00000139343 SNRPF 623820 sc-eQTL 2.88e-01 0.0645 0.0606 0.78 CD8T L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.31e-01 0.0172 0.0807 0.78 CD8T L1
ENSG00000059758 CDK17 82268 sc-eQTL 1.20e-01 -0.134 0.086 0.777 DC L1
ENSG00000084110 HAL 486383 sc-eQTL 5.37e-01 -0.0609 0.0983 0.777 DC L1
ENSG00000111144 LTA4H 439228 sc-eQTL 7.09e-01 0.0301 0.0805 0.777 DC L1
ENSG00000111145 ELK3 288373 sc-eQTL 1.35e-01 -0.147 0.098 0.777 DC L1
ENSG00000139343 SNRPF 623820 sc-eQTL 4.58e-01 0.0609 0.0819 0.777 DC L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 5.44e-01 -0.064 0.105 0.777 DC L1
ENSG00000257715 AC007298.1 457425 sc-eQTL 1.91e-01 -0.124 0.0946 0.777 DC L1
ENSG00000059758 CDK17 82268 sc-eQTL 4.89e-01 -0.0475 0.0684 0.78 Mono L1
ENSG00000084110 HAL 486383 sc-eQTL 5.23e-01 -0.0551 0.0862 0.78 Mono L1
ENSG00000111144 LTA4H 439228 sc-eQTL 1.51e-01 0.14 0.097 0.78 Mono L1
ENSG00000111145 ELK3 288373 sc-eQTL 5.61e-01 -0.0381 0.0654 0.78 Mono L1
ENSG00000139343 SNRPF 623820 sc-eQTL 9.35e-01 0.00506 0.0617 0.78 Mono L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.09e-02 -0.24 0.0933 0.78 Mono L1
ENSG00000257715 AC007298.1 457425 sc-eQTL 3.81e-01 0.0805 0.0917 0.78 Mono L1
ENSG00000059758 CDK17 82268 sc-eQTL 3.17e-01 0.0515 0.0514 0.779 NK L1
ENSG00000111144 LTA4H 439228 sc-eQTL 6.35e-01 -0.0416 0.0873 0.779 NK L1
ENSG00000111145 ELK3 288373 sc-eQTL 4.81e-01 -0.0585 0.0828 0.779 NK L1
ENSG00000139343 SNRPF 623820 sc-eQTL 9.77e-01 -0.00194 0.0687 0.779 NK L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.67e-01 -0.12 0.0866 0.779 NK L1
ENSG00000059758 CDK17 82268 sc-eQTL 3.28e-01 0.0425 0.0434 0.78 Other_T L1
ENSG00000074527 NTN4 691596 sc-eQTL 4.29e-01 -0.0636 0.0803 0.78 Other_T L1
ENSG00000111144 LTA4H 439228 sc-eQTL 9.90e-01 0.00119 0.0909 0.78 Other_T L1
ENSG00000111145 ELK3 288373 sc-eQTL 9.91e-01 -0.000776 0.0709 0.78 Other_T L1
ENSG00000139343 SNRPF 623820 sc-eQTL 8.24e-01 0.0146 0.0659 0.78 Other_T L1
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.42e-01 -0.0773 0.1 0.78 Other_T L1
ENSG00000188596 CFAP54 -6823 sc-eQTL 3.15e-01 0.105 0.104 0.78 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 82268 sc-eQTL 9.92e-01 0.000993 0.0976 0.773 B_Activated L2
ENSG00000111144 LTA4H 439228 sc-eQTL 2.53e-01 0.126 0.11 0.773 B_Activated L2
ENSG00000111145 ELK3 288373 sc-eQTL 3.41e-01 0.112 0.117 0.773 B_Activated L2
ENSG00000136014 USP44 931272 sc-eQTL 1.31e-01 0.135 0.0893 0.773 B_Activated L2
ENSG00000139343 SNRPF 623820 sc-eQTL 2.20e-01 0.135 0.11 0.773 B_Activated L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 6.83e-01 -0.0471 0.115 0.773 B_Activated L2
ENSG00000059758 CDK17 82268 sc-eQTL 6.13e-01 -0.0435 0.0858 0.779 B_Intermediate L2
ENSG00000111144 LTA4H 439228 sc-eQTL 9.37e-01 -0.00654 0.0831 0.779 B_Intermediate L2
ENSG00000111145 ELK3 288373 sc-eQTL 6.81e-02 -0.17 0.093 0.779 B_Intermediate L2
ENSG00000136014 USP44 931272 sc-eQTL 8.64e-03 -0.288 0.109 0.779 B_Intermediate L2
ENSG00000139343 SNRPF 623820 sc-eQTL 7.53e-01 -0.0294 0.0933 0.779 B_Intermediate L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 7.45e-01 -0.0356 0.109 0.779 B_Intermediate L2
ENSG00000059758 CDK17 82268 sc-eQTL 6.99e-01 -0.0323 0.0834 0.784 B_Memory L2
ENSG00000111144 LTA4H 439228 sc-eQTL 1.13e-01 -0.152 0.0957 0.784 B_Memory L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.33e-01 0.0743 0.0945 0.784 B_Memory L2
ENSG00000136014 USP44 931272 sc-eQTL 5.46e-02 -0.199 0.103 0.784 B_Memory L2
ENSG00000139343 SNRPF 623820 sc-eQTL 5.90e-01 -0.0541 0.1 0.784 B_Memory L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.67e-02 0.245 0.11 0.784 B_Memory L2
ENSG00000059758 CDK17 82268 sc-eQTL 5.24e-02 -0.132 0.0676 0.78 B_Naive1 L2
ENSG00000111144 LTA4H 439228 sc-eQTL 8.05e-01 0.0176 0.0714 0.78 B_Naive1 L2
ENSG00000111145 ELK3 288373 sc-eQTL 3.85e-01 -0.0733 0.0843 0.78 B_Naive1 L2
ENSG00000136014 USP44 931272 sc-eQTL 5.04e-01 -0.0709 0.106 0.78 B_Naive1 L2
ENSG00000139343 SNRPF 623820 sc-eQTL 4.37e-01 0.0639 0.082 0.78 B_Naive1 L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 6.02e-01 0.055 0.105 0.78 B_Naive1 L2
ENSG00000059758 CDK17 82268 sc-eQTL 9.69e-01 -0.00331 0.0864 0.781 B_Naive2 L2
ENSG00000111144 LTA4H 439228 sc-eQTL 7.27e-01 0.0286 0.0818 0.781 B_Naive2 L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.45e-01 -0.0737 0.0964 0.781 B_Naive2 L2
ENSG00000136014 USP44 931272 sc-eQTL 6.25e-01 -0.051 0.104 0.781 B_Naive2 L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.86e-01 0.0388 0.0958 0.781 B_Naive2 L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.92e-02 -0.265 0.112 0.781 B_Naive2 L2
ENSG00000059758 CDK17 82268 sc-eQTL 4.90e-01 -0.0544 0.0787 0.782 CD4_CTL L2
ENSG00000111144 LTA4H 439228 sc-eQTL 3.65e-01 -0.101 0.111 0.782 CD4_CTL L2
ENSG00000111145 ELK3 288373 sc-eQTL 6.62e-01 0.0492 0.112 0.782 CD4_CTL L2
ENSG00000136014 USP44 931272 sc-eQTL 4.05e-01 0.0748 0.0896 0.782 CD4_CTL L2
ENSG00000139343 SNRPF 623820 sc-eQTL 8.25e-01 -0.0216 0.0977 0.782 CD4_CTL L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.41e-02 -0.254 0.112 0.782 CD4_CTL L2
ENSG00000059758 CDK17 82268 sc-eQTL 3.97e-02 -0.1 0.0484 0.78 CD4_Naive L2
ENSG00000111144 LTA4H 439228 sc-eQTL 5.27e-01 -0.0447 0.0706 0.78 CD4_Naive L2
ENSG00000111145 ELK3 288373 sc-eQTL 9.56e-01 -0.00391 0.0707 0.78 CD4_Naive L2
ENSG00000136014 USP44 931272 sc-eQTL 1.22e-01 0.153 0.0985 0.78 CD4_Naive L2
ENSG00000139343 SNRPF 623820 sc-eQTL 4.04e-01 -0.0524 0.0627 0.78 CD4_Naive L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 7.70e-01 0.0226 0.0773 0.78 CD4_Naive L2
ENSG00000059758 CDK17 82268 sc-eQTL 1.32e-01 -0.0717 0.0474 0.78 CD4_TCM L2
ENSG00000111144 LTA4H 439228 sc-eQTL 5.23e-01 -0.0517 0.0808 0.78 CD4_TCM L2
ENSG00000111145 ELK3 288373 sc-eQTL 9.44e-02 0.133 0.0791 0.78 CD4_TCM L2
ENSG00000136014 USP44 931272 sc-eQTL 7.40e-01 0.0365 0.11 0.78 CD4_TCM L2
ENSG00000139343 SNRPF 623820 sc-eQTL 4.53e-01 -0.0491 0.0652 0.78 CD4_TCM L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.80e-01 0.0964 0.089 0.78 CD4_TCM L2
ENSG00000059758 CDK17 82268 sc-eQTL 8.27e-01 0.0129 0.0588 0.78 CD4_TEM L2
ENSG00000111144 LTA4H 439228 sc-eQTL 7.00e-01 0.035 0.0908 0.78 CD4_TEM L2
ENSG00000111145 ELK3 288373 sc-eQTL 7.35e-01 0.0286 0.0844 0.78 CD4_TEM L2
ENSG00000136014 USP44 931272 sc-eQTL 6.01e-01 0.0544 0.104 0.78 CD4_TEM L2
ENSG00000139343 SNRPF 623820 sc-eQTL 1.27e-01 -0.135 0.0879 0.78 CD4_TEM L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 7.26e-01 -0.0368 0.105 0.78 CD4_TEM L2
ENSG00000059758 CDK17 82268 sc-eQTL 8.40e-01 0.0115 0.0571 0.78 CD8_CTL L2
ENSG00000111144 LTA4H 439228 sc-eQTL 4.35e-01 0.0806 0.103 0.78 CD8_CTL L2
ENSG00000111145 ELK3 288373 sc-eQTL 9.64e-02 0.156 0.0933 0.78 CD8_CTL L2
ENSG00000136014 USP44 931272 sc-eQTL 5.03e-01 0.0701 0.105 0.78 CD8_CTL L2
ENSG00000139343 SNRPF 623820 sc-eQTL 3.48e-01 0.081 0.0862 0.78 CD8_CTL L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 3.15e-01 -0.0973 0.0966 0.78 CD8_CTL L2
ENSG00000059758 CDK17 82268 sc-eQTL 4.76e-02 -0.137 0.0685 0.78 CD8_Naive L2
ENSG00000111144 LTA4H 439228 sc-eQTL 8.43e-01 0.0164 0.0829 0.78 CD8_Naive L2
ENSG00000111145 ELK3 288373 sc-eQTL 7.81e-01 -0.0243 0.0876 0.78 CD8_Naive L2
ENSG00000136014 USP44 931272 sc-eQTL 3.63e-01 0.0837 0.0919 0.78 CD8_Naive L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.54e-01 0.0353 0.0788 0.78 CD8_Naive L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.15e-01 0.147 0.0933 0.78 CD8_Naive L2
ENSG00000059758 CDK17 82268 sc-eQTL 6.69e-01 0.0313 0.073 0.775 CD8_TCM L2
ENSG00000111144 LTA4H 439228 sc-eQTL 1.02e-01 -0.175 0.107 0.775 CD8_TCM L2
ENSG00000111145 ELK3 288373 sc-eQTL 7.96e-01 -0.0235 0.0909 0.775 CD8_TCM L2
ENSG00000136014 USP44 931272 sc-eQTL 4.71e-01 -0.0711 0.0984 0.775 CD8_TCM L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.14e-01 0.0529 0.105 0.775 CD8_TCM L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.04e-01 0.0254 0.103 0.775 CD8_TCM L2
ENSG00000059758 CDK17 82268 sc-eQTL 1.80e-01 -0.125 0.0929 0.781 CD8_TEM L2
ENSG00000111144 LTA4H 439228 sc-eQTL 6.54e-01 0.0513 0.114 0.781 CD8_TEM L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.71e-01 0.081 0.112 0.781 CD8_TEM L2
ENSG00000136014 USP44 931272 sc-eQTL 5.72e-01 -0.0541 0.0956 0.781 CD8_TEM L2
ENSG00000139343 SNRPF 623820 sc-eQTL 4.93e-01 0.0716 0.104 0.781 CD8_TEM L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.14e-01 0.0266 0.113 0.781 CD8_TEM L2
ENSG00000059758 CDK17 82268 sc-eQTL 5.81e-01 -0.0342 0.0619 0.779 MAIT L2
ENSG00000074527 NTN4 691596 sc-eQTL 3.46e-01 -0.0787 0.0833 0.779 MAIT L2
ENSG00000111144 LTA4H 439228 sc-eQTL 8.06e-01 -0.0236 0.0957 0.779 MAIT L2
ENSG00000111145 ELK3 288373 sc-eQTL 7.65e-01 -0.0241 0.0803 0.779 MAIT L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.58e-01 -0.0412 0.093 0.779 MAIT L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 5.66e-01 0.0601 0.104 0.779 MAIT L2
ENSG00000188596 CFAP54 -6823 sc-eQTL 7.10e-01 -0.0385 0.103 0.779 MAIT L2
ENSG00000059758 CDK17 82268 sc-eQTL 8.87e-02 0.114 0.0666 0.778 NK_CD56bright L2
ENSG00000111144 LTA4H 439228 sc-eQTL 7.15e-01 0.0362 0.0992 0.778 NK_CD56bright L2
ENSG00000111145 ELK3 288373 sc-eQTL 3.92e-01 -0.0902 0.105 0.778 NK_CD56bright L2
ENSG00000139343 SNRPF 623820 sc-eQTL 3.80e-01 0.0968 0.11 0.778 NK_CD56bright L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 9.98e-01 -0.000221 0.111 0.778 NK_CD56bright L2
ENSG00000059758 CDK17 82268 sc-eQTL 7.91e-01 0.0147 0.0555 0.78 NK_CD56dim L2
ENSG00000111144 LTA4H 439228 sc-eQTL 7.59e-01 -0.0308 0.1 0.78 NK_CD56dim L2
ENSG00000111145 ELK3 288373 sc-eQTL 6.45e-01 -0.041 0.0888 0.78 NK_CD56dim L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.95e-01 -0.0332 0.0845 0.78 NK_CD56dim L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 3.82e-02 -0.201 0.0963 0.78 NK_CD56dim L2
ENSG00000059758 CDK17 82268 sc-eQTL 7.25e-01 0.0311 0.0884 0.781 NK_HLA L2
ENSG00000111144 LTA4H 439228 sc-eQTL 8.66e-01 0.0196 0.116 0.781 NK_HLA L2
ENSG00000111145 ELK3 288373 sc-eQTL 8.56e-01 -0.0195 0.108 0.781 NK_HLA L2
ENSG00000139343 SNRPF 623820 sc-eQTL 9.98e-01 -0.000341 0.112 0.781 NK_HLA L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.15e-01 -0.0864 0.106 0.781 NK_HLA L2
ENSG00000059758 CDK17 82268 sc-eQTL 5.08e-01 0.0402 0.0607 0.78 NK_cytokine L2
ENSG00000111144 LTA4H 439228 sc-eQTL 5.43e-01 0.0625 0.103 0.78 NK_cytokine L2
ENSG00000111145 ELK3 288373 sc-eQTL 6.44e-01 -0.0455 0.0983 0.78 NK_cytokine L2
ENSG00000139343 SNRPF 623820 sc-eQTL 8.57e-01 0.0151 0.0833 0.78 NK_cytokine L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.28e-01 0.0817 0.103 0.78 NK_cytokine L2
ENSG00000059758 CDK17 82268 sc-eQTL 1.21e-01 -0.195 0.125 0.796 PB L2
ENSG00000111144 LTA4H 439228 sc-eQTL 9.22e-01 -0.0109 0.111 0.796 PB L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.98e-01 -0.0964 0.142 0.796 PB L2
ENSG00000136014 USP44 931272 sc-eQTL 5.80e-01 0.0731 0.132 0.796 PB L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.90e-01 -0.0554 0.139 0.796 PB L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 9.25e-01 0.0155 0.165 0.796 PB L2
ENSG00000059758 CDK17 82268 sc-eQTL 9.78e-01 0.00185 0.0675 0.778 Pro_T L2
ENSG00000074527 NTN4 691596 sc-eQTL 1.23e-01 -0.117 0.0753 0.778 Pro_T L2
ENSG00000111144 LTA4H 439228 sc-eQTL 4.94e-01 0.061 0.089 0.778 Pro_T L2
ENSG00000111145 ELK3 288373 sc-eQTL 8.19e-01 0.0246 0.108 0.778 Pro_T L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.87e-01 0.0274 0.0679 0.778 Pro_T L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 5.78e-01 0.055 0.0986 0.778 Pro_T L2
ENSG00000188596 CFAP54 -6823 sc-eQTL 7.58e-01 0.0246 0.0798 0.778 Pro_T L2
ENSG00000059758 CDK17 82268 sc-eQTL 9.56e-01 0.00404 0.0736 0.78 Treg L2
ENSG00000111144 LTA4H 439228 sc-eQTL 5.01e-01 -0.0627 0.0931 0.78 Treg L2
ENSG00000111145 ELK3 288373 sc-eQTL 3.81e-01 -0.074 0.0843 0.78 Treg L2
ENSG00000136014 USP44 931272 sc-eQTL 4.82e-01 0.0667 0.0947 0.78 Treg L2
ENSG00000139343 SNRPF 623820 sc-eQTL 1.87e-01 0.129 0.0974 0.78 Treg L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.65e-01 0.151 0.109 0.78 Treg L2
ENSG00000059758 CDK17 82268 sc-eQTL 7.40e-01 -0.0304 0.0914 0.778 cDC L2
ENSG00000084110 HAL 486383 sc-eQTL 8.98e-01 0.0122 0.095 0.778 cDC L2
ENSG00000111144 LTA4H 439228 sc-eQTL 3.88e-01 0.0703 0.0813 0.778 cDC L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.57e-01 -0.08 0.107 0.778 cDC L2
ENSG00000139343 SNRPF 623820 sc-eQTL 6.02e-01 0.047 0.0899 0.778 cDC L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.21e-01 -0.0248 0.11 0.778 cDC L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 6.24e-01 -0.0454 0.0924 0.778 cDC L2
ENSG00000059758 CDK17 82268 sc-eQTL 1.44e-01 -0.116 0.0788 0.78 cMono_IL1B L2
ENSG00000084110 HAL 486383 sc-eQTL 6.82e-01 -0.0355 0.0863 0.78 cMono_IL1B L2
ENSG00000111144 LTA4H 439228 sc-eQTL 9.55e-02 0.155 0.0927 0.78 cMono_IL1B L2
ENSG00000111145 ELK3 288373 sc-eQTL 2.15e-01 -0.089 0.0716 0.78 cMono_IL1B L2
ENSG00000139343 SNRPF 623820 sc-eQTL 5.84e-01 -0.0406 0.0741 0.78 cMono_IL1B L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.17e-03 -0.29 0.1 0.78 cMono_IL1B L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 6.53e-01 0.0428 0.0952 0.78 cMono_IL1B L2
ENSG00000059758 CDK17 82268 sc-eQTL 3.66e-01 -0.081 0.0895 0.78 cMono_S100A L2
ENSG00000084110 HAL 486383 sc-eQTL 5.51e-01 0.06 0.101 0.78 cMono_S100A L2
ENSG00000111144 LTA4H 439228 sc-eQTL 3.12e-01 0.102 0.1 0.78 cMono_S100A L2
ENSG00000111145 ELK3 288373 sc-eQTL 8.61e-01 0.0144 0.0819 0.78 cMono_S100A L2
ENSG00000139343 SNRPF 623820 sc-eQTL 9.58e-01 0.00422 0.0809 0.78 cMono_S100A L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 1.38e-01 -0.162 0.109 0.78 cMono_S100A L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 8.64e-01 0.0176 0.103 0.78 cMono_S100A L2
ENSG00000059758 CDK17 82268 sc-eQTL 3.30e-01 0.0864 0.0883 0.77 gdT L2
ENSG00000074527 NTN4 691596 sc-eQTL 9.39e-01 0.00782 0.102 0.77 gdT L2
ENSG00000111144 LTA4H 439228 sc-eQTL 3.14e-01 0.133 0.132 0.77 gdT L2
ENSG00000111145 ELK3 288373 sc-eQTL 6.87e-01 0.0496 0.123 0.77 gdT L2
ENSG00000139343 SNRPF 623820 sc-eQTL 9.81e-01 0.00286 0.118 0.77 gdT L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 3.56e-01 0.121 0.13 0.77 gdT L2
ENSG00000188596 CFAP54 -6823 sc-eQTL 3.22e-01 0.113 0.114 0.77 gdT L2
ENSG00000059758 CDK17 82268 sc-eQTL 1.87e-01 -0.131 0.0991 0.776 intMono L2
ENSG00000084110 HAL 486383 sc-eQTL 6.37e-01 0.0475 0.101 0.776 intMono L2
ENSG00000111144 LTA4H 439228 sc-eQTL 3.88e-01 0.0892 0.103 0.776 intMono L2
ENSG00000111145 ELK3 288373 sc-eQTL 3.13e-01 0.0928 0.0917 0.776 intMono L2
ENSG00000139343 SNRPF 623820 sc-eQTL 1.09e-01 -0.157 0.0977 0.776 intMono L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.45e-01 -0.078 0.102 0.776 intMono L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 5.97e-01 0.0544 0.103 0.776 intMono L2
ENSG00000059758 CDK17 82268 sc-eQTL 6.53e-01 0.0358 0.0795 0.771 ncMono L2
ENSG00000084110 HAL 486383 sc-eQTL 1.44e-01 -0.13 0.0883 0.771 ncMono L2
ENSG00000111144 LTA4H 439228 sc-eQTL 5.08e-01 0.0656 0.0989 0.771 ncMono L2
ENSG00000111145 ELK3 288373 sc-eQTL 8.48e-01 -0.0163 0.085 0.771 ncMono L2
ENSG00000139343 SNRPF 623820 sc-eQTL 4.73e-01 0.0623 0.0867 0.771 ncMono L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.82e-01 -0.0137 0.0922 0.771 ncMono L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 9.26e-01 0.0098 0.105 0.771 ncMono L2
ENSG00000059758 CDK17 82268 sc-eQTL 3.63e-02 -0.219 0.104 0.78 pDC L2
ENSG00000084110 HAL 486383 sc-eQTL 8.41e-01 0.0178 0.0889 0.78 pDC L2
ENSG00000111144 LTA4H 439228 sc-eQTL 1.91e-01 0.13 0.099 0.78 pDC L2
ENSG00000111145 ELK3 288373 sc-eQTL 4.59e-01 -0.0902 0.122 0.78 pDC L2
ENSG00000139343 SNRPF 623820 sc-eQTL 9.64e-01 -0.00474 0.106 0.78 pDC L2
ENSG00000139350 NEDD1 -424475 sc-eQTL 4.38e-01 -0.0909 0.117 0.78 pDC L2
ENSG00000257715 AC007298.1 457425 sc-eQTL 6.69e-01 0.043 0.1 0.78 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 82268 sc-eQTL 4.26e-01 -0.0566 0.071 0.78 B_Memory LOneK1K
ENSG00000111144 LTA4H 439228 sc-eQTL 8.76e-01 -0.0115 0.0738 0.78 B_Memory LOneK1K
ENSG00000111145 ELK3 288373 sc-eQTL 8.36e-01 -0.0175 0.0843 0.78 B_Memory LOneK1K
ENSG00000136014 USP44 931272 sc-eQTL 1.94e-03 -0.323 0.103 0.78 B_Memory LOneK1K
ENSG00000139343 SNRPF 623820 sc-eQTL 3.01e-01 -0.0845 0.0815 0.78 B_Memory LOneK1K
ENSG00000139350 NEDD1 -424475 sc-eQTL 8.89e-02 0.182 0.106 0.78 B_Memory LOneK1K
ENSG00000059758 CDK17 82268 sc-eQTL 1.16e-01 -0.0959 0.0608 0.78 B_Naive LOneK1K
ENSG00000111144 LTA4H 439228 sc-eQTL 3.97e-01 0.0581 0.0685 0.78 B_Naive LOneK1K
ENSG00000111145 ELK3 288373 sc-eQTL 1.45e-01 -0.114 0.0778 0.78 B_Naive LOneK1K
ENSG00000136014 USP44 931272 sc-eQTL 3.92e-01 -0.0818 0.0954 0.78 B_Naive LOneK1K
ENSG00000139343 SNRPF 623820 sc-eQTL 5.59e-01 0.046 0.0787 0.78 B_Naive LOneK1K
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.33e-01 -0.124 0.104 0.78 B_Naive LOneK1K
ENSG00000059758 CDK17 82268 sc-eQTL 9.04e-02 -0.121 0.071 0.78 CD14_Mono LOneK1K
ENSG00000084110 HAL 486383 sc-eQTL 7.23e-01 -0.0308 0.0866 0.78 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 439228 sc-eQTL 1.28e-01 0.144 0.0946 0.78 CD14_Mono LOneK1K
ENSG00000111145 ELK3 288373 sc-eQTL 6.28e-01 -0.0334 0.0687 0.78 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 623820 sc-eQTL 9.87e-01 0.00105 0.0663 0.78 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -424475 sc-eQTL 9.67e-03 -0.267 0.102 0.78 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 457425 sc-eQTL 4.37e-01 0.0749 0.0962 0.78 CD14_Mono LOneK1K
ENSG00000059758 CDK17 82268 sc-eQTL 5.21e-01 -0.0472 0.0734 0.778 CD16_Mono LOneK1K
ENSG00000084110 HAL 486383 sc-eQTL 3.66e-01 -0.0786 0.0867 0.778 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 439228 sc-eQTL 4.09e-01 0.0795 0.0961 0.778 CD16_Mono LOneK1K
ENSG00000111145 ELK3 288373 sc-eQTL 9.18e-01 -0.00736 0.0713 0.778 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 623820 sc-eQTL 4.92e-01 -0.0506 0.0734 0.778 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -424475 sc-eQTL 3.51e-01 -0.088 0.094 0.778 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 457425 sc-eQTL 8.61e-01 0.0175 0.0997 0.778 CD16_Mono LOneK1K
ENSG00000059758 CDK17 82268 sc-eQTL 8.47e-01 0.0101 0.0522 0.78 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 439228 sc-eQTL 6.34e-01 -0.0432 0.0907 0.78 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 288373 sc-eQTL 4.10e-01 -0.0684 0.0829 0.78 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 623820 sc-eQTL 5.97e-01 -0.0376 0.071 0.78 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -424475 sc-eQTL 2.32e-01 -0.106 0.0883 0.78 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000139350 NEDD1 -424475 eQTL 5.36e-20 -0.253 0.027 0.0 0.0 0.223
ENSG00000188596 CFAP54 -6827 eQTL 3.08e-08 -0.13 0.0232 0.0458 0.0444 0.223

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139350 NEDD1 -424475 9.39e-07 6.07e-07 1.22e-07 3.81e-07 1.07e-07 2.64e-07 5.82e-07 1.73e-07 5.88e-07 2.8e-07 8.15e-07 4.55e-07 9.23e-07 1.52e-07 3e-07 2.84e-07 4.3e-07 4.24e-07 2.6e-07 1.78e-07 2.35e-07 4.66e-07 3.87e-07 2.17e-07 9.15e-07 2.57e-07 3.48e-07 2.83e-07 4.33e-07 6.73e-07 3.49e-07 6.77e-08 4.57e-08 1.69e-07 3.55e-07 1.28e-07 1.06e-07 1.03e-07 6.66e-08 2.15e-08 1.03e-07 5.52e-07 4.59e-08 1.05e-08 1.47e-07 1.5e-08 1.08e-07 2.44e-08 6.17e-08
ENSG00000188596 CFAP54 -6827 2.78e-05 2.76e-05 6.57e-06 1.59e-05 6.21e-06 1.6e-05 4.4e-05 4.94e-06 2.89e-05 1.47e-05 3.61e-05 1.63e-05 4.95e-05 1.32e-05 7.05e-06 1.84e-05 1.7e-05 2.52e-05 9.6e-06 8.59e-06 1.71e-05 3.06e-05 2.94e-05 1.22e-05 4.49e-05 8.34e-06 1.38e-05 1.24e-05 3.26e-05 4.18e-05 1.87e-05 2.45e-06 4.61e-06 8.73e-06 1.26e-05 7.91e-06 4.4e-06 3.74e-06 6.91e-06 4.22e-06 1.94e-06 3.49e-05 3.63e-06 5.9e-07 3.06e-06 4.74e-06 4.42e-06 2.21e-06 1.64e-06