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Genes within 1Mb (chr12:96444544:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 44064 sc-eQTL 9.01e-01 0.00564 0.0453 0.618 B L1
ENSG00000111142 METAP2 971024 sc-eQTL 4.56e-01 -0.0478 0.064 0.618 B L1
ENSG00000111144 LTA4H 401024 sc-eQTL 3.25e-01 0.0554 0.0562 0.618 B L1
ENSG00000111145 ELK3 250169 sc-eQTL 9.52e-01 -0.00361 0.0599 0.618 B L1
ENSG00000136014 USP44 893068 sc-eQTL 8.24e-03 -0.194 0.0727 0.618 B L1
ENSG00000139343 SNRPF 585616 sc-eQTL 2.29e-01 0.0654 0.0542 0.618 B L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 1.44e-01 -0.116 0.079 0.618 B L1
ENSG00000059758 CDK17 44064 sc-eQTL 2.72e-01 -0.0406 0.0368 0.618 CD4T L1
ENSG00000111142 METAP2 971024 sc-eQTL 2.28e-01 0.062 0.0514 0.618 CD4T L1
ENSG00000111144 LTA4H 401024 sc-eQTL 9.11e-01 -0.00567 0.0507 0.618 CD4T L1
ENSG00000111145 ELK3 250169 sc-eQTL 4.53e-01 -0.0412 0.0549 0.618 CD4T L1
ENSG00000136014 USP44 893068 sc-eQTL 1.44e-01 0.114 0.078 0.618 CD4T L1
ENSG00000139343 SNRPF 585616 sc-eQTL 8.71e-01 -0.00784 0.048 0.618 CD4T L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.03e-01 0.0148 0.0591 0.618 CD4T L1
ENSG00000059758 CDK17 44064 sc-eQTL 5.74e-01 -0.0214 0.0381 0.618 CD8T L1
ENSG00000111142 METAP2 971024 sc-eQTL 7.98e-02 0.108 0.0611 0.618 CD8T L1
ENSG00000111144 LTA4H 401024 sc-eQTL 4.71e-01 -0.0295 0.0409 0.618 CD8T L1
ENSG00000111145 ELK3 250169 sc-eQTL 6.34e-01 -0.0294 0.0616 0.618 CD8T L1
ENSG00000136014 USP44 893068 sc-eQTL 3.84e-01 0.061 0.0699 0.618 CD8T L1
ENSG00000139343 SNRPF 585616 sc-eQTL 1.94e-01 0.0656 0.0503 0.618 CD8T L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 6.24e-01 -0.0329 0.0671 0.618 CD8T L1
ENSG00000059758 CDK17 44064 sc-eQTL 6.51e-01 -0.0323 0.0713 0.61 DC L1
ENSG00000084110 HAL 448179 sc-eQTL 1.79e-01 -0.109 0.0808 0.61 DC L1
ENSG00000111142 METAP2 971024 sc-eQTL 5.14e-01 0.0584 0.0894 0.61 DC L1
ENSG00000111144 LTA4H 401024 sc-eQTL 1.98e-01 0.0855 0.0661 0.61 DC L1
ENSG00000111145 ELK3 250169 sc-eQTL 2.09e-01 -0.102 0.081 0.61 DC L1
ENSG00000139343 SNRPF 585616 sc-eQTL 6.16e-01 0.034 0.0676 0.61 DC L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.69e-01 -0.0628 0.0867 0.61 DC L1
ENSG00000257715 AC007298.1 419221 sc-eQTL 5.12e-01 -0.0514 0.0783 0.61 DC L1
ENSG00000059758 CDK17 44064 sc-eQTL 7.77e-01 -0.0161 0.0568 0.618 Mono L1
ENSG00000084110 HAL 448179 sc-eQTL 6.00e-01 -0.0376 0.0715 0.618 Mono L1
ENSG00000111142 METAP2 971024 sc-eQTL 2.02e-01 -0.0788 0.0616 0.618 Mono L1
ENSG00000111144 LTA4H 401024 sc-eQTL 7.42e-01 0.0266 0.0808 0.618 Mono L1
ENSG00000111145 ELK3 250169 sc-eQTL 4.94e-01 -0.0371 0.0542 0.618 Mono L1
ENSG00000139343 SNRPF 585616 sc-eQTL 3.42e-01 -0.0486 0.0511 0.618 Mono L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 7.52e-01 -0.0248 0.0786 0.618 Mono L1
ENSG00000257715 AC007298.1 419221 sc-eQTL 9.00e-01 -0.00958 0.0761 0.618 Mono L1
ENSG00000059758 CDK17 44064 sc-eQTL 3.99e-02 0.088 0.0425 0.618 NK L1
ENSG00000111142 METAP2 971024 sc-eQTL 9.71e-01 -0.00228 0.0636 0.618 NK L1
ENSG00000111144 LTA4H 401024 sc-eQTL 3.35e-01 -0.0703 0.0728 0.618 NK L1
ENSG00000111145 ELK3 250169 sc-eQTL 8.68e-01 0.0115 0.0692 0.618 NK L1
ENSG00000139343 SNRPF 585616 sc-eQTL 9.78e-01 0.00157 0.0574 0.618 NK L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 9.23e-01 0.00704 0.0726 0.618 NK L1
ENSG00000059758 CDK17 44064 sc-eQTL 7.33e-02 0.0642 0.0357 0.618 Other_T L1
ENSG00000074527 NTN4 653392 sc-eQTL 2.48e-01 -0.0768 0.0663 0.618 Other_T L1
ENSG00000111142 METAP2 971024 sc-eQTL 4.60e-01 0.0507 0.0686 0.618 Other_T L1
ENSG00000111144 LTA4H 401024 sc-eQTL 6.55e-01 -0.0336 0.0751 0.618 Other_T L1
ENSG00000111145 ELK3 250169 sc-eQTL 3.32e-01 -0.0569 0.0585 0.618 Other_T L1
ENSG00000139343 SNRPF 585616 sc-eQTL 9.32e-01 -0.00464 0.0545 0.618 Other_T L1
ENSG00000139350 NEDD1 -462679 sc-eQTL 3.49e-01 -0.0778 0.0828 0.618 Other_T L1
ENSG00000188596 CFAP54 -45027 sc-eQTL 7.80e-01 0.024 0.086 0.618 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 44064 sc-eQTL 9.91e-01 0.00095 0.0834 0.615 B_Activated L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.05e-01 0.169 0.104 0.615 B_Activated L2
ENSG00000111144 LTA4H 401024 sc-eQTL 1.23e-01 0.145 0.0937 0.615 B_Activated L2
ENSG00000111145 ELK3 250169 sc-eQTL 2.30e-01 0.12 0.0996 0.615 B_Activated L2
ENSG00000136014 USP44 893068 sc-eQTL 1.69e-01 0.105 0.0763 0.615 B_Activated L2
ENSG00000139343 SNRPF 585616 sc-eQTL 2.53e-01 0.108 0.0939 0.615 B_Activated L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 1.80e-01 -0.132 0.0981 0.615 B_Activated L2
ENSG00000059758 CDK17 44064 sc-eQTL 3.30e-01 0.0682 0.0698 0.616 B_Intermediate L2
ENSG00000111142 METAP2 971024 sc-eQTL 7.25e-01 0.0282 0.0802 0.616 B_Intermediate L2
ENSG00000111144 LTA4H 401024 sc-eQTL 5.10e-01 0.0447 0.0677 0.616 B_Intermediate L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.30e-02 -0.154 0.0756 0.616 B_Intermediate L2
ENSG00000136014 USP44 893068 sc-eQTL 7.42e-03 -0.239 0.0885 0.616 B_Intermediate L2
ENSG00000139343 SNRPF 585616 sc-eQTL 3.36e-01 -0.0733 0.0759 0.616 B_Intermediate L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 9.34e-01 0.00738 0.0891 0.616 B_Intermediate L2
ENSG00000059758 CDK17 44064 sc-eQTL 9.90e-01 -0.000835 0.0692 0.621 B_Memory L2
ENSG00000111142 METAP2 971024 sc-eQTL 9.50e-01 0.00565 0.0899 0.621 B_Memory L2
ENSG00000111144 LTA4H 401024 sc-eQTL 6.64e-01 0.0348 0.0798 0.621 B_Memory L2
ENSG00000111145 ELK3 250169 sc-eQTL 3.66e-01 0.0709 0.0783 0.621 B_Memory L2
ENSG00000136014 USP44 893068 sc-eQTL 1.78e-01 -0.116 0.0858 0.621 B_Memory L2
ENSG00000139343 SNRPF 585616 sc-eQTL 4.34e-01 -0.0651 0.083 0.621 B_Memory L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 1.26e-01 0.14 0.0915 0.621 B_Memory L2
ENSG00000059758 CDK17 44064 sc-eQTL 7.49e-01 -0.0181 0.0567 0.618 B_Naive1 L2
ENSG00000111142 METAP2 971024 sc-eQTL 6.52e-01 0.0331 0.0733 0.618 B_Naive1 L2
ENSG00000111144 LTA4H 401024 sc-eQTL 8.84e-01 -0.00866 0.0594 0.618 B_Naive1 L2
ENSG00000111145 ELK3 250169 sc-eQTL 2.30e-01 0.0842 0.0699 0.618 B_Naive1 L2
ENSG00000136014 USP44 893068 sc-eQTL 4.88e-02 -0.173 0.0874 0.618 B_Naive1 L2
ENSG00000139343 SNRPF 585616 sc-eQTL 8.16e-03 0.179 0.0671 0.618 B_Naive1 L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 6.88e-01 0.0352 0.0875 0.618 B_Naive1 L2
ENSG00000059758 CDK17 44064 sc-eQTL 4.34e-01 0.0563 0.0718 0.618 B_Naive2 L2
ENSG00000111142 METAP2 971024 sc-eQTL 2.78e-01 -0.0941 0.0866 0.618 B_Naive2 L2
ENSG00000111144 LTA4H 401024 sc-eQTL 9.18e-01 0.00703 0.0682 0.618 B_Naive2 L2
ENSG00000111145 ELK3 250169 sc-eQTL 7.31e-01 -0.0277 0.0804 0.618 B_Naive2 L2
ENSG00000136014 USP44 893068 sc-eQTL 6.97e-01 -0.0338 0.0868 0.618 B_Naive2 L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.35e-01 0.119 0.0794 0.618 B_Naive2 L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 3.69e-02 -0.197 0.0939 0.618 B_Naive2 L2
ENSG00000059758 CDK17 44064 sc-eQTL 6.48e-01 0.0301 0.0659 0.623 CD4_CTL L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.47e-01 -0.0887 0.0942 0.623 CD4_CTL L2
ENSG00000111144 LTA4H 401024 sc-eQTL 1.84e-02 -0.218 0.0917 0.623 CD4_CTL L2
ENSG00000111145 ELK3 250169 sc-eQTL 9.17e-01 -0.00987 0.0941 0.623 CD4_CTL L2
ENSG00000136014 USP44 893068 sc-eQTL 7.67e-01 0.0222 0.0751 0.623 CD4_CTL L2
ENSG00000139343 SNRPF 585616 sc-eQTL 6.56e-01 -0.0365 0.0818 0.623 CD4_CTL L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 3.29e-01 -0.0924 0.0944 0.623 CD4_CTL L2
ENSG00000059758 CDK17 44064 sc-eQTL 2.07e-01 -0.0511 0.0403 0.618 CD4_Naive L2
ENSG00000111142 METAP2 971024 sc-eQTL 2.00e-01 0.0749 0.0582 0.618 CD4_Naive L2
ENSG00000111144 LTA4H 401024 sc-eQTL 4.82e-01 -0.0412 0.0585 0.618 CD4_Naive L2
ENSG00000111145 ELK3 250169 sc-eQTL 5.89e-01 -0.0316 0.0585 0.618 CD4_Naive L2
ENSG00000136014 USP44 893068 sc-eQTL 8.65e-02 0.14 0.0815 0.618 CD4_Naive L2
ENSG00000139343 SNRPF 585616 sc-eQTL 8.34e-01 0.0109 0.052 0.618 CD4_Naive L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 5.74e-01 -0.0361 0.064 0.618 CD4_Naive L2
ENSG00000059758 CDK17 44064 sc-eQTL 4.45e-01 -0.0304 0.0397 0.618 CD4_TCM L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.96e-01 0.0874 0.0675 0.618 CD4_TCM L2
ENSG00000111144 LTA4H 401024 sc-eQTL 6.42e-01 -0.0314 0.0674 0.618 CD4_TCM L2
ENSG00000111145 ELK3 250169 sc-eQTL 7.15e-01 -0.0243 0.0664 0.618 CD4_TCM L2
ENSG00000136014 USP44 893068 sc-eQTL 5.46e-01 0.0555 0.0917 0.618 CD4_TCM L2
ENSG00000139343 SNRPF 585616 sc-eQTL 8.21e-01 -0.0124 0.0544 0.618 CD4_TCM L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 2.42e-01 0.087 0.0742 0.618 CD4_TCM L2
ENSG00000059758 CDK17 44064 sc-eQTL 9.24e-02 0.082 0.0485 0.618 CD4_TEM L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.39e-01 -0.0781 0.0815 0.618 CD4_TEM L2
ENSG00000111144 LTA4H 401024 sc-eQTL 2.91e-01 0.0796 0.0752 0.618 CD4_TEM L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.64e-01 0.0514 0.07 0.618 CD4_TEM L2
ENSG00000136014 USP44 893068 sc-eQTL 4.20e-01 0.0695 0.0861 0.618 CD4_TEM L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.14e-01 -0.116 0.0729 0.618 CD4_TEM L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 5.31e-01 0.0545 0.0869 0.618 CD4_TEM L2
ENSG00000059758 CDK17 44064 sc-eQTL 9.12e-02 0.0806 0.0475 0.618 CD8_CTL L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.05e-01 0.134 0.0821 0.618 CD8_CTL L2
ENSG00000111144 LTA4H 401024 sc-eQTL 3.52e-01 0.0803 0.0861 0.618 CD8_CTL L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.03e-01 0.0657 0.0785 0.618 CD8_CTL L2
ENSG00000136014 USP44 893068 sc-eQTL 8.62e-01 0.0153 0.0876 0.618 CD8_CTL L2
ENSG00000139343 SNRPF 585616 sc-eQTL 9.15e-01 0.00775 0.0722 0.618 CD8_CTL L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.06e-01 -0.0674 0.0809 0.618 CD8_CTL L2
ENSG00000059758 CDK17 44064 sc-eQTL 3.38e-01 -0.0547 0.057 0.618 CD8_Naive L2
ENSG00000111142 METAP2 971024 sc-eQTL 4.74e-01 0.0544 0.0758 0.618 CD8_Naive L2
ENSG00000111144 LTA4H 401024 sc-eQTL 5.00e-01 -0.0461 0.0683 0.618 CD8_Naive L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.15e-01 -0.0591 0.0723 0.618 CD8_Naive L2
ENSG00000136014 USP44 893068 sc-eQTL 6.84e-01 0.0309 0.076 0.618 CD8_Naive L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.87e-01 0.0858 0.0648 0.618 CD8_Naive L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.46e-01 0.015 0.0775 0.618 CD8_Naive L2
ENSG00000059758 CDK17 44064 sc-eQTL 3.45e-01 0.0586 0.0619 0.606 CD8_TCM L2
ENSG00000111142 METAP2 971024 sc-eQTL 7.66e-01 -0.0276 0.0925 0.606 CD8_TCM L2
ENSG00000111144 LTA4H 401024 sc-eQTL 1.17e-01 -0.143 0.0906 0.606 CD8_TCM L2
ENSG00000111145 ELK3 250169 sc-eQTL 3.96e-01 0.0655 0.077 0.606 CD8_TCM L2
ENSG00000136014 USP44 893068 sc-eQTL 7.31e-01 -0.0288 0.0836 0.606 CD8_TCM L2
ENSG00000139343 SNRPF 585616 sc-eQTL 2.71e-01 0.0978 0.0886 0.606 CD8_TCM L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 2.96e-01 -0.091 0.0868 0.606 CD8_TCM L2
ENSG00000059758 CDK17 44064 sc-eQTL 6.56e-01 -0.0351 0.0785 0.614 CD8_TEM L2
ENSG00000111142 METAP2 971024 sc-eQTL 5.77e-01 0.0514 0.0921 0.614 CD8_TEM L2
ENSG00000111144 LTA4H 401024 sc-eQTL 5.99e-01 0.0507 0.0961 0.614 CD8_TEM L2
ENSG00000111145 ELK3 250169 sc-eQTL 8.39e-01 0.0193 0.0946 0.614 CD8_TEM L2
ENSG00000136014 USP44 893068 sc-eQTL 7.43e-01 -0.0265 0.0805 0.614 CD8_TEM L2
ENSG00000139343 SNRPF 585616 sc-eQTL 4.95e-01 -0.06 0.0878 0.614 CD8_TEM L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 5.63e-01 -0.0553 0.0953 0.614 CD8_TEM L2
ENSG00000059758 CDK17 44064 sc-eQTL 8.98e-01 -0.00666 0.0517 0.617 MAIT L2
ENSG00000074527 NTN4 653392 sc-eQTL 4.96e-01 -0.0475 0.0697 0.617 MAIT L2
ENSG00000111142 METAP2 971024 sc-eQTL 4.05e-01 0.0731 0.0877 0.617 MAIT L2
ENSG00000111144 LTA4H 401024 sc-eQTL 1.77e-01 -0.108 0.0796 0.617 MAIT L2
ENSG00000111145 ELK3 250169 sc-eQTL 5.95e-01 -0.0357 0.067 0.617 MAIT L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.60e-01 -0.109 0.0774 0.617 MAIT L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.96e-01 0.0114 0.0873 0.617 MAIT L2
ENSG00000188596 CFAP54 -45027 sc-eQTL 3.59e-01 -0.0793 0.0863 0.617 MAIT L2
ENSG00000059758 CDK17 44064 sc-eQTL 2.14e-02 0.128 0.0553 0.616 NK_CD56bright L2
ENSG00000111142 METAP2 971024 sc-eQTL 4.14e-01 -0.0772 0.0944 0.616 NK_CD56bright L2
ENSG00000111144 LTA4H 401024 sc-eQTL 7.71e-01 -0.0242 0.0829 0.616 NK_CD56bright L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.99e-01 -0.0595 0.0878 0.616 NK_CD56bright L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.51e-01 0.132 0.0915 0.616 NK_CD56bright L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 1.38e-01 0.137 0.0923 0.616 NK_CD56bright L2
ENSG00000059758 CDK17 44064 sc-eQTL 1.06e-01 0.0747 0.046 0.621 NK_CD56dim L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.91e-01 0.0696 0.0811 0.621 NK_CD56dim L2
ENSG00000111144 LTA4H 401024 sc-eQTL 7.25e-01 0.0295 0.0837 0.621 NK_CD56dim L2
ENSG00000111145 ELK3 250169 sc-eQTL 6.99e-01 0.0287 0.0741 0.621 NK_CD56dim L2
ENSG00000139343 SNRPF 585616 sc-eQTL 9.29e-02 -0.118 0.0701 0.621 NK_CD56dim L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.86e-01 -0.0117 0.0812 0.621 NK_CD56dim L2
ENSG00000059758 CDK17 44064 sc-eQTL 8.08e-01 0.0179 0.0735 0.623 NK_HLA L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.40e-01 -0.136 0.0921 0.623 NK_HLA L2
ENSG00000111144 LTA4H 401024 sc-eQTL 4.47e-01 -0.0734 0.0962 0.623 NK_HLA L2
ENSG00000111145 ELK3 250169 sc-eQTL 6.87e-01 -0.036 0.0894 0.623 NK_HLA L2
ENSG00000139343 SNRPF 585616 sc-eQTL 4.38e-01 0.0724 0.0931 0.623 NK_HLA L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 6.17e-01 0.0442 0.0881 0.623 NK_HLA L2
ENSG00000059758 CDK17 44064 sc-eQTL 1.42e-01 0.0749 0.0508 0.621 NK_cytokine L2
ENSG00000111142 METAP2 971024 sc-eQTL 5.15e-01 0.0553 0.0847 0.621 NK_cytokine L2
ENSG00000111144 LTA4H 401024 sc-eQTL 5.54e-01 -0.0512 0.0863 0.621 NK_cytokine L2
ENSG00000111145 ELK3 250169 sc-eQTL 9.76e-01 -0.00254 0.0827 0.621 NK_cytokine L2
ENSG00000139343 SNRPF 585616 sc-eQTL 5.95e-01 0.0373 0.07 0.621 NK_cytokine L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 6.18e-01 0.0432 0.0865 0.621 NK_cytokine L2
ENSG00000059758 CDK17 44064 sc-eQTL 8.88e-01 -0.0136 0.0967 0.622 PB L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.87e-01 -0.149 0.112 0.622 PB L2
ENSG00000111144 LTA4H 401024 sc-eQTL 4.93e-01 -0.0585 0.0851 0.622 PB L2
ENSG00000111145 ELK3 250169 sc-eQTL 5.91e-01 0.0588 0.109 0.622 PB L2
ENSG00000136014 USP44 893068 sc-eQTL 1.52e-01 0.145 0.1 0.622 PB L2
ENSG00000139343 SNRPF 585616 sc-eQTL 4.51e-01 -0.0805 0.106 0.622 PB L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 7.05e-01 -0.0481 0.127 0.622 PB L2
ENSG00000059758 CDK17 44064 sc-eQTL 7.81e-01 0.0157 0.0562 0.613 Pro_T L2
ENSG00000074527 NTN4 653392 sc-eQTL 2.89e-01 -0.067 0.0629 0.613 Pro_T L2
ENSG00000111142 METAP2 971024 sc-eQTL 9.04e-02 0.126 0.074 0.613 Pro_T L2
ENSG00000111144 LTA4H 401024 sc-eQTL 7.73e-01 0.0215 0.0742 0.613 Pro_T L2
ENSG00000111145 ELK3 250169 sc-eQTL 5.01e-01 -0.0604 0.0897 0.613 Pro_T L2
ENSG00000139343 SNRPF 585616 sc-eQTL 6.66e-01 -0.0244 0.0566 0.613 Pro_T L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.36e-01 0.0641 0.0821 0.613 Pro_T L2
ENSG00000188596 CFAP54 -45027 sc-eQTL 5.20e-01 0.0428 0.0664 0.613 Pro_T L2
ENSG00000059758 CDK17 44064 sc-eQTL 7.23e-01 -0.022 0.0619 0.618 Treg L2
ENSG00000111142 METAP2 971024 sc-eQTL 2.54e-01 0.096 0.084 0.618 Treg L2
ENSG00000111144 LTA4H 401024 sc-eQTL 9.71e-01 0.00284 0.0785 0.618 Treg L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.27e-01 -0.0565 0.071 0.618 Treg L2
ENSG00000136014 USP44 893068 sc-eQTL 3.60e-01 0.073 0.0797 0.618 Treg L2
ENSG00000139343 SNRPF 585616 sc-eQTL 1.16e-01 0.129 0.0818 0.618 Treg L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.39e-01 0.0712 0.0917 0.618 Treg L2
ENSG00000059758 CDK17 44064 sc-eQTL 3.90e-01 0.0655 0.076 0.61 cDC L2
ENSG00000084110 HAL 448179 sc-eQTL 3.48e-01 -0.0744 0.079 0.61 cDC L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.08e-01 -0.0975 0.0953 0.61 cDC L2
ENSG00000111144 LTA4H 401024 sc-eQTL 1.64e-01 0.0944 0.0675 0.61 cDC L2
ENSG00000111145 ELK3 250169 sc-eQTL 7.65e-02 -0.158 0.0888 0.61 cDC L2
ENSG00000139343 SNRPF 585616 sc-eQTL 3.48e-01 0.0704 0.0748 0.61 cDC L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.24e-01 -0.0203 0.0914 0.61 cDC L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 8.73e-01 -0.0123 0.077 0.61 cDC L2
ENSG00000059758 CDK17 44064 sc-eQTL 2.90e-01 -0.0697 0.0657 0.618 cMono_IL1B L2
ENSG00000084110 HAL 448179 sc-eQTL 3.16e-01 -0.0722 0.0717 0.618 cMono_IL1B L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.44e-01 -0.109 0.0742 0.618 cMono_IL1B L2
ENSG00000111144 LTA4H 401024 sc-eQTL 5.10e-01 0.0512 0.0776 0.618 cMono_IL1B L2
ENSG00000111145 ELK3 250169 sc-eQTL 8.60e-02 -0.103 0.0594 0.618 cMono_IL1B L2
ENSG00000139343 SNRPF 585616 sc-eQTL 3.14e-01 -0.0621 0.0616 0.618 cMono_IL1B L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 1.12e-01 -0.135 0.0845 0.618 cMono_IL1B L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 9.73e-01 -0.00268 0.0793 0.618 cMono_IL1B L2
ENSG00000059758 CDK17 44064 sc-eQTL 6.04e-01 -0.0389 0.0749 0.618 cMono_S100A L2
ENSG00000084110 HAL 448179 sc-eQTL 1.99e-01 0.108 0.0838 0.618 cMono_S100A L2
ENSG00000111142 METAP2 971024 sc-eQTL 1.39e-01 -0.126 0.0847 0.618 cMono_S100A L2
ENSG00000111144 LTA4H 401024 sc-eQTL 9.20e-01 0.00844 0.084 0.618 cMono_S100A L2
ENSG00000111145 ELK3 250169 sc-eQTL 9.27e-01 0.00625 0.0684 0.618 cMono_S100A L2
ENSG00000139343 SNRPF 585616 sc-eQTL 8.05e-01 -0.0167 0.0676 0.618 cMono_S100A L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 7.25e-01 0.0322 0.0913 0.618 cMono_S100A L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 8.71e-01 -0.014 0.0859 0.618 cMono_S100A L2
ENSG00000059758 CDK17 44064 sc-eQTL 4.97e-01 0.0504 0.0739 0.606 gdT L2
ENSG00000074527 NTN4 653392 sc-eQTL 5.01e-01 0.0572 0.0848 0.606 gdT L2
ENSG00000111142 METAP2 971024 sc-eQTL 5.29e-01 -0.067 0.106 0.606 gdT L2
ENSG00000111144 LTA4H 401024 sc-eQTL 8.22e-01 0.025 0.111 0.606 gdT L2
ENSG00000111145 ELK3 250169 sc-eQTL 5.72e-01 -0.058 0.102 0.606 gdT L2
ENSG00000139343 SNRPF 585616 sc-eQTL 9.33e-01 -0.00839 0.0989 0.606 gdT L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 2.55e-01 -0.124 0.109 0.606 gdT L2
ENSG00000188596 CFAP54 -45027 sc-eQTL 1.66e-01 0.132 0.0951 0.606 gdT L2
ENSG00000059758 CDK17 44064 sc-eQTL 2.97e-01 -0.0867 0.0829 0.609 intMono L2
ENSG00000084110 HAL 448179 sc-eQTL 6.39e-01 0.0395 0.084 0.609 intMono L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.54e-01 0.0882 0.095 0.609 intMono L2
ENSG00000111144 LTA4H 401024 sc-eQTL 8.03e-01 0.0216 0.0862 0.609 intMono L2
ENSG00000111145 ELK3 250169 sc-eQTL 4.02e-01 0.0643 0.0767 0.609 intMono L2
ENSG00000139343 SNRPF 585616 sc-eQTL 3.74e-01 -0.073 0.0819 0.609 intMono L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.62e-01 -0.0149 0.0853 0.609 intMono L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 1.99e-01 0.11 0.0854 0.609 intMono L2
ENSG00000059758 CDK17 44064 sc-eQTL 6.39e-01 0.0314 0.0668 0.606 ncMono L2
ENSG00000084110 HAL 448179 sc-eQTL 1.91e-01 -0.0976 0.0743 0.606 ncMono L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.95e-01 -0.0767 0.0901 0.606 ncMono L2
ENSG00000111144 LTA4H 401024 sc-eQTL 8.03e-01 -0.0207 0.0832 0.606 ncMono L2
ENSG00000111145 ELK3 250169 sc-eQTL 1.20e-01 0.111 0.071 0.606 ncMono L2
ENSG00000139343 SNRPF 585616 sc-eQTL 7.87e-02 -0.128 0.0724 0.606 ncMono L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 3.43e-01 0.0735 0.0773 0.606 ncMono L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 3.15e-01 -0.0889 0.0882 0.606 ncMono L2
ENSG00000059758 CDK17 44064 sc-eQTL 2.08e-01 -0.11 0.087 0.619 pDC L2
ENSG00000084110 HAL 448179 sc-eQTL 7.67e-01 -0.0219 0.0738 0.619 pDC L2
ENSG00000111142 METAP2 971024 sc-eQTL 3.31e-01 0.097 0.0994 0.619 pDC L2
ENSG00000111144 LTA4H 401024 sc-eQTL 3.30e-02 0.175 0.0814 0.619 pDC L2
ENSG00000111145 ELK3 250169 sc-eQTL 9.21e-01 -0.0101 0.101 0.619 pDC L2
ENSG00000139343 SNRPF 585616 sc-eQTL 8.39e-01 -0.0179 0.0882 0.619 pDC L2
ENSG00000139350 NEDD1 -462679 sc-eQTL 5.12e-01 -0.0639 0.0972 0.619 pDC L2
ENSG00000257715 AC007298.1 419221 sc-eQTL 5.95e-01 0.0445 0.0834 0.619 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 44064 sc-eQTL 5.01e-01 0.0397 0.0589 0.618 B_Memory LOneK1K
ENSG00000111142 METAP2 971024 sc-eQTL 5.84e-01 0.0449 0.0819 0.618 B_Memory LOneK1K
ENSG00000111144 LTA4H 401024 sc-eQTL 3.82e-01 0.0535 0.0611 0.618 B_Memory LOneK1K
ENSG00000111145 ELK3 250169 sc-eQTL 4.77e-01 -0.0498 0.0699 0.618 B_Memory LOneK1K
ENSG00000136014 USP44 893068 sc-eQTL 9.00e-03 -0.226 0.0858 0.618 B_Memory LOneK1K
ENSG00000139343 SNRPF 585616 sc-eQTL 5.04e-01 -0.0453 0.0677 0.618 B_Memory LOneK1K
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.53e-01 0.0669 0.0888 0.618 B_Memory LOneK1K
ENSG00000059758 CDK17 44064 sc-eQTL 9.61e-01 0.0025 0.0508 0.618 B_Naive LOneK1K
ENSG00000111142 METAP2 971024 sc-eQTL 9.32e-01 0.00584 0.0687 0.618 B_Naive LOneK1K
ENSG00000111144 LTA4H 401024 sc-eQTL 6.42e-01 0.0266 0.057 0.618 B_Naive LOneK1K
ENSG00000111145 ELK3 250169 sc-eQTL 8.45e-01 0.0127 0.0649 0.618 B_Naive LOneK1K
ENSG00000136014 USP44 893068 sc-eQTL 7.29e-02 -0.142 0.0787 0.618 B_Naive LOneK1K
ENSG00000139343 SNRPF 585616 sc-eQTL 2.31e-02 0.148 0.0646 0.618 B_Naive LOneK1K
ENSG00000139350 NEDD1 -462679 sc-eQTL 3.36e-01 -0.0833 0.0863 0.618 B_Naive LOneK1K
ENSG00000059758 CDK17 44064 sc-eQTL 3.04e-01 -0.0611 0.0593 0.618 CD14_Mono LOneK1K
ENSG00000084110 HAL 448179 sc-eQTL 7.93e-01 -0.0189 0.072 0.618 CD14_Mono LOneK1K
ENSG00000111142 METAP2 971024 sc-eQTL 8.15e-02 -0.118 0.0673 0.618 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 401024 sc-eQTL 6.53e-01 0.0356 0.079 0.618 CD14_Mono LOneK1K
ENSG00000111145 ELK3 250169 sc-eQTL 3.73e-01 -0.0509 0.057 0.618 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 585616 sc-eQTL 4.00e-01 -0.0464 0.055 0.618 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -462679 sc-eQTL 4.16e-01 -0.0704 0.0863 0.618 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 419221 sc-eQTL 8.90e-01 -0.0111 0.0801 0.618 CD14_Mono LOneK1K
ENSG00000059758 CDK17 44064 sc-eQTL 5.09e-01 -0.0402 0.0609 0.616 CD16_Mono LOneK1K
ENSG00000084110 HAL 448179 sc-eQTL 4.42e-01 -0.0555 0.072 0.616 CD16_Mono LOneK1K
ENSG00000111142 METAP2 971024 sc-eQTL 9.88e-01 0.00125 0.0818 0.616 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 401024 sc-eQTL 9.92e-01 0.000782 0.0799 0.616 CD16_Mono LOneK1K
ENSG00000111145 ELK3 250169 sc-eQTL 5.46e-01 0.0357 0.0591 0.616 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 585616 sc-eQTL 8.21e-02 -0.106 0.0605 0.616 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -462679 sc-eQTL 8.76e-01 0.0122 0.0782 0.616 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 419221 sc-eQTL 6.94e-01 -0.0326 0.0827 0.616 CD16_Mono LOneK1K
ENSG00000059758 CDK17 44064 sc-eQTL 1.59e-01 0.0612 0.0433 0.621 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 971024 sc-eQTL 9.32e-01 0.00562 0.0662 0.621 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 401024 sc-eQTL 3.92e-01 -0.0649 0.0756 0.621 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 250169 sc-eQTL 8.52e-01 0.0129 0.0693 0.621 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 585616 sc-eQTL 4.68e-01 -0.043 0.0592 0.621 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -462679 sc-eQTL 9.12e-01 0.0082 0.0739 0.621 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188596 \N -45031 5.79e-06 1.33e-05 1.3e-06 4.35e-06 1.85e-06 2.48e-06 1.14e-05 1.79e-06 1.07e-05 4.74e-06 2.06e-05 6.22e-06 2.36e-05 3.66e-06 2.39e-06 5.65e-06 4.36e-06 7.6e-06 1.65e-06 1.71e-06 3.4e-06 9.68e-06 6.85e-06 1.43e-06 1.97e-05 2.01e-06 3.68e-06 3.1e-06 1.02e-05 7.92e-06 1.18e-05 4.18e-07 5.47e-07 2.16e-06 2.12e-06 1.09e-06 9.56e-07 5.61e-07 8.29e-07 6.54e-07 6.17e-07 5.71e-05 8.82e-07 1.49e-07 6.36e-07 1.25e-06 6.63e-07 1.98e-07 1.57e-07