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Genes within 1Mb (chr12:96417886:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 17406 sc-eQTL 2.09e-01 -0.0669 0.0531 0.767 B L1
ENSG00000111142 METAP2 944366 sc-eQTL 6.14e-01 0.0381 0.0754 0.767 B L1
ENSG00000111144 LTA4H 374366 sc-eQTL 4.21e-01 0.0533 0.0661 0.767 B L1
ENSG00000111145 ELK3 223511 sc-eQTL 7.85e-01 -0.0192 0.0705 0.767 B L1
ENSG00000136014 USP44 866410 sc-eQTL 7.67e-03 -0.23 0.0855 0.767 B L1
ENSG00000139343 SNRPF 558958 sc-eQTL 2.46e-01 -0.0743 0.0639 0.767 B L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 8.80e-01 -0.0141 0.0935 0.767 B L1
ENSG00000059758 CDK17 17406 sc-eQTL 8.69e-01 0.00729 0.0442 0.767 CD4T L1
ENSG00000111142 METAP2 944366 sc-eQTL 4.92e-01 -0.0424 0.0616 0.767 CD4T L1
ENSG00000111144 LTA4H 374366 sc-eQTL 6.03e-01 -0.0316 0.0607 0.767 CD4T L1
ENSG00000111145 ELK3 223511 sc-eQTL 9.26e-01 0.00613 0.0658 0.767 CD4T L1
ENSG00000136014 USP44 866410 sc-eQTL 6.52e-01 0.0423 0.0938 0.767 CD4T L1
ENSG00000139343 SNRPF 558958 sc-eQTL 4.07e-01 -0.0477 0.0574 0.767 CD4T L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 3.31e-01 0.0688 0.0707 0.767 CD4T L1
ENSG00000059758 CDK17 17406 sc-eQTL 7.10e-02 -0.0812 0.0447 0.767 CD8T L1
ENSG00000111142 METAP2 944366 sc-eQTL 1.36e-01 0.108 0.0724 0.767 CD8T L1
ENSG00000111144 LTA4H 374366 sc-eQTL 7.54e-01 -0.0152 0.0484 0.767 CD8T L1
ENSG00000111145 ELK3 223511 sc-eQTL 7.24e-03 -0.194 0.0716 0.767 CD8T L1
ENSG00000136014 USP44 866410 sc-eQTL 8.37e-01 -0.0171 0.0828 0.767 CD8T L1
ENSG00000139343 SNRPF 558958 sc-eQTL 5.47e-01 0.0359 0.0596 0.767 CD8T L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 9.51e-01 0.0049 0.0794 0.767 CD8T L1
ENSG00000059758 CDK17 17406 sc-eQTL 2.93e-01 -0.0904 0.0858 0.768 DC L1
ENSG00000084110 HAL 421521 sc-eQTL 7.41e-01 -0.0324 0.0979 0.768 DC L1
ENSG00000111142 METAP2 944366 sc-eQTL 8.38e-01 -0.0221 0.108 0.768 DC L1
ENSG00000111144 LTA4H 374366 sc-eQTL 3.11e-01 -0.0812 0.0799 0.768 DC L1
ENSG00000111145 ELK3 223511 sc-eQTL 6.34e-01 0.0467 0.0981 0.768 DC L1
ENSG00000139343 SNRPF 558958 sc-eQTL 8.90e-01 -0.0113 0.0816 0.768 DC L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 9.17e-01 0.011 0.105 0.768 DC L1
ENSG00000257715 AC007298.1 392563 sc-eQTL 2.69e-02 -0.208 0.0934 0.768 DC L1
ENSG00000059758 CDK17 17406 sc-eQTL 5.16e-03 -0.193 0.0682 0.767 Mono L1
ENSG00000084110 HAL 421521 sc-eQTL 9.01e-01 0.0109 0.0875 0.767 Mono L1
ENSG00000111142 METAP2 944366 sc-eQTL 9.25e-01 -0.00714 0.0756 0.767 Mono L1
ENSG00000111144 LTA4H 374366 sc-eQTL 4.53e-01 0.0741 0.0987 0.767 Mono L1
ENSG00000111145 ELK3 223511 sc-eQTL 6.12e-01 0.0336 0.0663 0.767 Mono L1
ENSG00000139343 SNRPF 558958 sc-eQTL 9.04e-01 -0.00752 0.0626 0.767 Mono L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.82e-03 -0.284 0.094 0.767 Mono L1
ENSG00000257715 AC007298.1 392563 sc-eQTL 4.46e-01 0.071 0.093 0.767 Mono L1
ENSG00000059758 CDK17 17406 sc-eQTL 6.20e-02 0.0941 0.0501 0.77 NK L1
ENSG00000111142 METAP2 944366 sc-eQTL 4.96e-01 0.051 0.0747 0.77 NK L1
ENSG00000111144 LTA4H 374366 sc-eQTL 3.22e-01 0.0849 0.0856 0.77 NK L1
ENSG00000111145 ELK3 223511 sc-eQTL 8.29e-01 -0.0176 0.0814 0.77 NK L1
ENSG00000139343 SNRPF 558958 sc-eQTL 2.01e-01 -0.0862 0.0672 0.77 NK L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.71e-01 -0.0939 0.0852 0.77 NK L1
ENSG00000059758 CDK17 17406 sc-eQTL 1.71e-01 0.0577 0.042 0.767 Other_T L1
ENSG00000074527 NTN4 626734 sc-eQTL 2.82e-01 -0.0838 0.0778 0.767 Other_T L1
ENSG00000111142 METAP2 944366 sc-eQTL 1.60e-01 0.113 0.0802 0.767 Other_T L1
ENSG00000111144 LTA4H 374366 sc-eQTL 5.52e-01 -0.0525 0.0881 0.767 Other_T L1
ENSG00000111145 ELK3 223511 sc-eQTL 9.52e-01 0.00418 0.0688 0.767 Other_T L1
ENSG00000139343 SNRPF 558958 sc-eQTL 6.14e-01 -0.0323 0.0639 0.767 Other_T L1
ENSG00000139350 NEDD1 -489337 sc-eQTL 1.77e-01 -0.131 0.097 0.767 Other_T L1
ENSG00000188596 CFAP54 -71685 sc-eQTL 2.84e-01 0.108 0.101 0.767 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 17406 sc-eQTL 4.18e-01 -0.0767 0.0945 0.768 B_Activated L2
ENSG00000111142 METAP2 944366 sc-eQTL 1.12e-01 0.189 0.118 0.768 B_Activated L2
ENSG00000111144 LTA4H 374366 sc-eQTL 6.28e-01 0.052 0.107 0.768 B_Activated L2
ENSG00000111145 ELK3 223511 sc-eQTL 4.22e-01 0.0912 0.113 0.768 B_Activated L2
ENSG00000136014 USP44 866410 sc-eQTL 8.90e-01 -0.012 0.0872 0.768 B_Activated L2
ENSG00000139343 SNRPF 558958 sc-eQTL 3.31e-01 0.104 0.107 0.768 B_Activated L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 6.59e-01 0.0495 0.112 0.768 B_Activated L2
ENSG00000059758 CDK17 17406 sc-eQTL 3.60e-01 -0.076 0.0829 0.766 B_Intermediate L2
ENSG00000111142 METAP2 944366 sc-eQTL 5.16e-01 -0.062 0.0952 0.766 B_Intermediate L2
ENSG00000111144 LTA4H 374366 sc-eQTL 6.39e-01 0.0378 0.0804 0.766 B_Intermediate L2
ENSG00000111145 ELK3 223511 sc-eQTL 6.43e-01 -0.0421 0.0907 0.766 B_Intermediate L2
ENSG00000136014 USP44 866410 sc-eQTL 1.19e-01 -0.166 0.106 0.766 B_Intermediate L2
ENSG00000139343 SNRPF 558958 sc-eQTL 9.39e-01 0.0069 0.0904 0.766 B_Intermediate L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 4.02e-01 -0.0887 0.106 0.766 B_Intermediate L2
ENSG00000059758 CDK17 17406 sc-eQTL 5.53e-01 -0.0475 0.0798 0.769 B_Memory L2
ENSG00000111142 METAP2 944366 sc-eQTL 6.66e-01 0.0449 0.104 0.769 B_Memory L2
ENSG00000111144 LTA4H 374366 sc-eQTL 7.00e-01 -0.0356 0.0922 0.769 B_Memory L2
ENSG00000111145 ELK3 223511 sc-eQTL 5.85e-01 -0.0496 0.0906 0.769 B_Memory L2
ENSG00000136014 USP44 866410 sc-eQTL 1.53e-01 -0.142 0.099 0.769 B_Memory L2
ENSG00000139343 SNRPF 558958 sc-eQTL 7.72e-01 0.0278 0.0961 0.769 B_Memory L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 4.25e-01 0.0848 0.106 0.769 B_Memory L2
ENSG00000059758 CDK17 17406 sc-eQTL 7.25e-01 0.0236 0.067 0.767 B_Naive1 L2
ENSG00000111142 METAP2 944366 sc-eQTL 4.63e-01 0.0636 0.0865 0.767 B_Naive1 L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.93e-01 0.000649 0.0702 0.767 B_Naive1 L2
ENSG00000111145 ELK3 223511 sc-eQTL 6.65e-01 -0.036 0.0829 0.767 B_Naive1 L2
ENSG00000136014 USP44 866410 sc-eQTL 6.11e-02 -0.195 0.103 0.767 B_Naive1 L2
ENSG00000139343 SNRPF 558958 sc-eQTL 3.29e-01 0.0787 0.0805 0.767 B_Naive1 L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 8.62e-01 0.018 0.103 0.767 B_Naive1 L2
ENSG00000059758 CDK17 17406 sc-eQTL 5.64e-01 -0.0484 0.0838 0.768 B_Naive2 L2
ENSG00000111142 METAP2 944366 sc-eQTL 9.68e-01 0.00413 0.101 0.768 B_Naive2 L2
ENSG00000111144 LTA4H 374366 sc-eQTL 8.07e-01 0.0194 0.0794 0.768 B_Naive2 L2
ENSG00000111145 ELK3 223511 sc-eQTL 8.91e-01 0.0129 0.0937 0.768 B_Naive2 L2
ENSG00000136014 USP44 866410 sc-eQTL 7.42e-01 -0.0333 0.101 0.768 B_Naive2 L2
ENSG00000139343 SNRPF 558958 sc-eQTL 1.39e-01 -0.137 0.0925 0.768 B_Naive2 L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 3.32e-01 -0.107 0.11 0.768 B_Naive2 L2
ENSG00000059758 CDK17 17406 sc-eQTL 2.29e-01 -0.0932 0.0771 0.761 CD4_CTL L2
ENSG00000111142 METAP2 944366 sc-eQTL 6.25e-01 -0.0541 0.111 0.761 CD4_CTL L2
ENSG00000111144 LTA4H 374366 sc-eQTL 6.89e-02 -0.198 0.108 0.761 CD4_CTL L2
ENSG00000111145 ELK3 223511 sc-eQTL 6.95e-03 0.296 0.109 0.761 CD4_CTL L2
ENSG00000136014 USP44 866410 sc-eQTL 7.92e-01 -0.0233 0.0882 0.761 CD4_CTL L2
ENSG00000139343 SNRPF 558958 sc-eQTL 4.64e-01 -0.0704 0.096 0.761 CD4_CTL L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 1.13e-01 -0.176 0.11 0.761 CD4_CTL L2
ENSG00000059758 CDK17 17406 sc-eQTL 8.60e-01 0.00856 0.0485 0.767 CD4_Naive L2
ENSG00000111142 METAP2 944366 sc-eQTL 7.15e-01 -0.0256 0.0699 0.767 CD4_Naive L2
ENSG00000111144 LTA4H 374366 sc-eQTL 8.17e-01 -0.0162 0.0701 0.767 CD4_Naive L2
ENSG00000111145 ELK3 223511 sc-eQTL 8.25e-01 0.0155 0.0701 0.767 CD4_Naive L2
ENSG00000136014 USP44 866410 sc-eQTL 3.49e-01 0.0919 0.098 0.767 CD4_Naive L2
ENSG00000139343 SNRPF 558958 sc-eQTL 4.92e-01 -0.0428 0.0622 0.767 CD4_Naive L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 5.85e-01 0.042 0.0766 0.767 CD4_Naive L2
ENSG00000059758 CDK17 17406 sc-eQTL 8.69e-01 0.00777 0.0471 0.767 CD4_TCM L2
ENSG00000111142 METAP2 944366 sc-eQTL 5.29e-01 -0.0505 0.0802 0.767 CD4_TCM L2
ENSG00000111144 LTA4H 374366 sc-eQTL 8.23e-01 0.0179 0.0799 0.767 CD4_TCM L2
ENSG00000111145 ELK3 223511 sc-eQTL 2.98e-01 -0.0819 0.0784 0.767 CD4_TCM L2
ENSG00000136014 USP44 866410 sc-eQTL 5.23e-01 0.0695 0.109 0.767 CD4_TCM L2
ENSG00000139343 SNRPF 558958 sc-eQTL 9.92e-01 -0.000653 0.0645 0.767 CD4_TCM L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.57e-02 0.196 0.0871 0.767 CD4_TCM L2
ENSG00000059758 CDK17 17406 sc-eQTL 4.67e-01 0.0421 0.0579 0.767 CD4_TEM L2
ENSG00000111142 METAP2 944366 sc-eQTL 8.98e-01 -0.0124 0.0968 0.767 CD4_TEM L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.05e-01 0.0107 0.0894 0.767 CD4_TEM L2
ENSG00000111145 ELK3 223511 sc-eQTL 8.65e-01 -0.0141 0.0831 0.767 CD4_TEM L2
ENSG00000136014 USP44 866410 sc-eQTL 9.06e-01 -0.0121 0.102 0.767 CD4_TEM L2
ENSG00000139343 SNRPF 558958 sc-eQTL 3.66e-01 -0.0788 0.0869 0.767 CD4_TEM L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 4.03e-01 -0.0864 0.103 0.767 CD4_TEM L2
ENSG00000059758 CDK17 17406 sc-eQTL 9.04e-01 -0.00684 0.0569 0.767 CD8_CTL L2
ENSG00000111142 METAP2 944366 sc-eQTL 5.30e-01 0.0618 0.0982 0.767 CD8_CTL L2
ENSG00000111144 LTA4H 374366 sc-eQTL 2.60e-01 -0.116 0.102 0.767 CD8_CTL L2
ENSG00000111145 ELK3 223511 sc-eQTL 7.32e-01 0.0321 0.0935 0.767 CD8_CTL L2
ENSG00000136014 USP44 866410 sc-eQTL 9.09e-01 -0.0119 0.104 0.767 CD8_CTL L2
ENSG00000139343 SNRPF 558958 sc-eQTL 8.76e-01 0.0134 0.086 0.767 CD8_CTL L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 3.51e-01 -0.09 0.0962 0.767 CD8_CTL L2
ENSG00000059758 CDK17 17406 sc-eQTL 1.58e-01 -0.0955 0.0674 0.767 CD8_Naive L2
ENSG00000111142 METAP2 944366 sc-eQTL 8.27e-01 0.0196 0.0899 0.767 CD8_Naive L2
ENSG00000111144 LTA4H 374366 sc-eQTL 7.83e-01 0.0224 0.0811 0.767 CD8_Naive L2
ENSG00000111145 ELK3 223511 sc-eQTL 1.32e-02 -0.211 0.0845 0.767 CD8_Naive L2
ENSG00000136014 USP44 866410 sc-eQTL 9.21e-01 0.00898 0.0901 0.767 CD8_Naive L2
ENSG00000139343 SNRPF 558958 sc-eQTL 8.14e-01 0.0182 0.0771 0.767 CD8_Naive L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.53e-01 0.105 0.0915 0.767 CD8_Naive L2
ENSG00000059758 CDK17 17406 sc-eQTL 8.63e-01 0.0125 0.0724 0.759 CD8_TCM L2
ENSG00000111142 METAP2 944366 sc-eQTL 9.96e-01 0.000562 0.108 0.759 CD8_TCM L2
ENSG00000111144 LTA4H 374366 sc-eQTL 4.73e-02 0.21 0.105 0.759 CD8_TCM L2
ENSG00000111145 ELK3 223511 sc-eQTL 2.66e-01 -0.1 0.0898 0.759 CD8_TCM L2
ENSG00000136014 USP44 866410 sc-eQTL 5.98e-01 -0.0515 0.0975 0.759 CD8_TCM L2
ENSG00000139343 SNRPF 558958 sc-eQTL 5.39e-01 -0.0639 0.104 0.759 CD8_TCM L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 6.10e-01 -0.0519 0.102 0.759 CD8_TCM L2
ENSG00000059758 CDK17 17406 sc-eQTL 7.01e-01 -0.0354 0.092 0.772 CD8_TEM L2
ENSG00000111142 METAP2 944366 sc-eQTL 4.63e-02 0.215 0.107 0.772 CD8_TEM L2
ENSG00000111144 LTA4H 374366 sc-eQTL 1.86e-01 0.149 0.112 0.772 CD8_TEM L2
ENSG00000111145 ELK3 223511 sc-eQTL 6.30e-01 -0.0535 0.111 0.772 CD8_TEM L2
ENSG00000136014 USP44 866410 sc-eQTL 3.46e-01 -0.0889 0.0941 0.772 CD8_TEM L2
ENSG00000139343 SNRPF 558958 sc-eQTL 5.98e-01 0.0544 0.103 0.772 CD8_TEM L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.98e-01 -0.116 0.112 0.772 CD8_TEM L2
ENSG00000059758 CDK17 17406 sc-eQTL 7.62e-01 -0.0184 0.0606 0.766 MAIT L2
ENSG00000074527 NTN4 626734 sc-eQTL 5.84e-01 -0.0448 0.0817 0.766 MAIT L2
ENSG00000111142 METAP2 944366 sc-eQTL 2.72e-01 0.113 0.103 0.766 MAIT L2
ENSG00000111144 LTA4H 374366 sc-eQTL 7.81e-01 0.026 0.0936 0.766 MAIT L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.71e-01 -0.00284 0.0786 0.766 MAIT L2
ENSG00000139343 SNRPF 558958 sc-eQTL 6.08e-01 -0.0467 0.091 0.766 MAIT L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 8.42e-01 -0.0204 0.102 0.766 MAIT L2
ENSG00000188596 CFAP54 -71685 sc-eQTL 8.39e-01 0.0206 0.101 0.766 MAIT L2
ENSG00000059758 CDK17 17406 sc-eQTL 3.48e-02 0.136 0.0638 0.764 NK_CD56bright L2
ENSG00000111142 METAP2 944366 sc-eQTL 9.12e-01 -0.0121 0.109 0.764 NK_CD56bright L2
ENSG00000111144 LTA4H 374366 sc-eQTL 1.71e-01 0.131 0.0951 0.764 NK_CD56bright L2
ENSG00000111145 ELK3 223511 sc-eQTL 1.90e-01 0.133 0.101 0.764 NK_CD56bright L2
ENSG00000139343 SNRPF 558958 sc-eQTL 7.87e-01 0.0287 0.106 0.764 NK_CD56bright L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 9.33e-01 0.00898 0.107 0.764 NK_CD56bright L2
ENSG00000059758 CDK17 17406 sc-eQTL 2.24e-02 0.124 0.0538 0.769 NK_CD56dim L2
ENSG00000111142 METAP2 944366 sc-eQTL 3.12e-01 0.0965 0.0953 0.769 NK_CD56dim L2
ENSG00000111144 LTA4H 374366 sc-eQTL 2.14e-01 0.122 0.0981 0.769 NK_CD56dim L2
ENSG00000111145 ELK3 223511 sc-eQTL 4.66e-01 -0.0636 0.0871 0.769 NK_CD56dim L2
ENSG00000139343 SNRPF 558958 sc-eQTL 1.06e-01 -0.134 0.0825 0.769 NK_CD56dim L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 6.15e-01 -0.0481 0.0955 0.769 NK_CD56dim L2
ENSG00000059758 CDK17 17406 sc-eQTL 1.62e-01 -0.119 0.0847 0.767 NK_HLA L2
ENSG00000111142 METAP2 944366 sc-eQTL 7.55e-01 -0.0335 0.107 0.767 NK_HLA L2
ENSG00000111144 LTA4H 374366 sc-eQTL 4.61e-01 -0.0822 0.111 0.767 NK_HLA L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.97e-01 0.000446 0.104 0.767 NK_HLA L2
ENSG00000139343 SNRPF 558958 sc-eQTL 6.38e-01 -0.0507 0.108 0.767 NK_HLA L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 1.04e-01 -0.166 0.101 0.767 NK_HLA L2
ENSG00000059758 CDK17 17406 sc-eQTL 2.96e-01 0.0623 0.0595 0.769 NK_cytokine L2
ENSG00000111142 METAP2 944366 sc-eQTL 6.13e-01 0.0501 0.099 0.769 NK_cytokine L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.99e-01 -0.000163 0.101 0.769 NK_cytokine L2
ENSG00000111145 ELK3 223511 sc-eQTL 1.00e+00 -4.01e-05 0.0966 0.769 NK_cytokine L2
ENSG00000139343 SNRPF 558958 sc-eQTL 8.15e-01 0.0192 0.0818 0.769 NK_cytokine L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 5.02e-01 -0.0679 0.101 0.769 NK_cytokine L2
ENSG00000059758 CDK17 17406 sc-eQTL 1.01e-02 -0.317 0.121 0.793 PB L2
ENSG00000111142 METAP2 944366 sc-eQTL 1.27e-01 0.222 0.144 0.793 PB L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.92e-01 -0.00105 0.11 0.793 PB L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.45e-01 0.00966 0.141 0.793 PB L2
ENSG00000136014 USP44 866410 sc-eQTL 5.15e-01 -0.0851 0.13 0.793 PB L2
ENSG00000139343 SNRPF 558958 sc-eQTL 5.11e-01 -0.0905 0.137 0.793 PB L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.06e-01 0.206 0.162 0.793 PB L2
ENSG00000059758 CDK17 17406 sc-eQTL 7.31e-01 0.0228 0.0664 0.765 Pro_T L2
ENSG00000074527 NTN4 626734 sc-eQTL 4.09e-01 -0.0615 0.0744 0.765 Pro_T L2
ENSG00000111142 METAP2 944366 sc-eQTL 8.34e-01 0.0185 0.088 0.765 Pro_T L2
ENSG00000111144 LTA4H 374366 sc-eQTL 3.58e-01 -0.0807 0.0875 0.765 Pro_T L2
ENSG00000111145 ELK3 223511 sc-eQTL 6.03e-02 -0.199 0.105 0.765 Pro_T L2
ENSG00000139343 SNRPF 558958 sc-eQTL 7.40e-01 0.0222 0.0669 0.765 Pro_T L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 8.63e-02 -0.166 0.0964 0.765 Pro_T L2
ENSG00000188596 CFAP54 -71685 sc-eQTL 6.79e-01 0.0326 0.0785 0.765 Pro_T L2
ENSG00000059758 CDK17 17406 sc-eQTL 7.19e-01 0.0266 0.0739 0.767 Treg L2
ENSG00000111142 METAP2 944366 sc-eQTL 7.61e-01 0.0306 0.101 0.767 Treg L2
ENSG00000111144 LTA4H 374366 sc-eQTL 6.74e-01 -0.0394 0.0936 0.767 Treg L2
ENSG00000111145 ELK3 223511 sc-eQTL 4.03e-01 -0.071 0.0847 0.767 Treg L2
ENSG00000136014 USP44 866410 sc-eQTL 2.35e-01 0.113 0.095 0.767 Treg L2
ENSG00000139343 SNRPF 558958 sc-eQTL 6.75e-01 0.0412 0.0982 0.767 Treg L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 9.34e-01 0.00914 0.11 0.767 Treg L2
ENSG00000059758 CDK17 17406 sc-eQTL 9.11e-01 -0.0102 0.0917 0.763 cDC L2
ENSG00000084110 HAL 421521 sc-eQTL 5.51e-01 0.0568 0.0952 0.763 cDC L2
ENSG00000111142 METAP2 944366 sc-eQTL 5.44e-01 0.0698 0.115 0.763 cDC L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.35e-01 0.00669 0.0817 0.763 cDC L2
ENSG00000111145 ELK3 223511 sc-eQTL 3.80e-01 0.0947 0.108 0.763 cDC L2
ENSG00000139343 SNRPF 558958 sc-eQTL 6.96e-02 -0.163 0.0894 0.763 cDC L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 5.37e-01 0.0679 0.11 0.763 cDC L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 5.77e-01 -0.0517 0.0926 0.763 cDC L2
ENSG00000059758 CDK17 17406 sc-eQTL 1.40e-05 -0.336 0.0756 0.767 cMono_IL1B L2
ENSG00000084110 HAL 421521 sc-eQTL 7.59e-01 0.0265 0.0862 0.767 cMono_IL1B L2
ENSG00000111142 METAP2 944366 sc-eQTL 7.47e-01 0.0289 0.0894 0.767 cMono_IL1B L2
ENSG00000111144 LTA4H 374366 sc-eQTL 5.06e-01 0.062 0.0931 0.767 cMono_IL1B L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.18e-01 -0.0074 0.0718 0.767 cMono_IL1B L2
ENSG00000139343 SNRPF 558958 sc-eQTL 6.89e-01 -0.0297 0.074 0.767 cMono_IL1B L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 3.01e-02 -0.22 0.101 0.767 cMono_IL1B L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 5.27e-01 0.0603 0.0951 0.767 cMono_IL1B L2
ENSG00000059758 CDK17 17406 sc-eQTL 4.82e-02 -0.178 0.0896 0.767 cMono_S100A L2
ENSG00000084110 HAL 421521 sc-eQTL 6.67e-01 0.0437 0.101 0.767 cMono_S100A L2
ENSG00000111142 METAP2 944366 sc-eQTL 7.11e-01 0.038 0.103 0.767 cMono_S100A L2
ENSG00000111144 LTA4H 374366 sc-eQTL 5.54e-01 0.0601 0.101 0.767 cMono_S100A L2
ENSG00000111145 ELK3 223511 sc-eQTL 1.97e-01 0.106 0.0822 0.767 cMono_S100A L2
ENSG00000139343 SNRPF 558958 sc-eQTL 4.80e-01 -0.0577 0.0815 0.767 cMono_S100A L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 1.35e-01 -0.164 0.11 0.767 cMono_S100A L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 4.48e-01 0.0788 0.104 0.767 cMono_S100A L2
ENSG00000059758 CDK17 17406 sc-eQTL 8.31e-02 0.146 0.0835 0.742 gdT L2
ENSG00000074527 NTN4 626734 sc-eQTL 8.92e-01 0.0132 0.0969 0.742 gdT L2
ENSG00000111142 METAP2 944366 sc-eQTL 1.14e-01 0.191 0.12 0.742 gdT L2
ENSG00000111144 LTA4H 374366 sc-eQTL 2.52e-01 -0.145 0.126 0.742 gdT L2
ENSG00000111145 ELK3 223511 sc-eQTL 1.84e-01 0.155 0.116 0.742 gdT L2
ENSG00000139343 SNRPF 558958 sc-eQTL 1.54e-01 0.16 0.112 0.742 gdT L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 9.99e-01 -0.000207 0.125 0.742 gdT L2
ENSG00000188596 CFAP54 -71685 sc-eQTL 7.55e-02 0.193 0.108 0.742 gdT L2
ENSG00000059758 CDK17 17406 sc-eQTL 9.13e-01 -0.0112 0.102 0.769 intMono L2
ENSG00000084110 HAL 421521 sc-eQTL 7.88e-01 -0.0278 0.103 0.769 intMono L2
ENSG00000111142 METAP2 944366 sc-eQTL 5.89e-01 -0.0632 0.117 0.769 intMono L2
ENSG00000111144 LTA4H 374366 sc-eQTL 6.91e-01 0.0422 0.106 0.769 intMono L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.76e-01 -0.00279 0.0944 0.769 intMono L2
ENSG00000139343 SNRPF 558958 sc-eQTL 5.27e-01 -0.0638 0.101 0.769 intMono L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.95e-01 -0.11 0.105 0.769 intMono L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 8.73e-01 0.0168 0.105 0.769 intMono L2
ENSG00000059758 CDK17 17406 sc-eQTL 9.75e-01 0.00253 0.082 0.769 ncMono L2
ENSG00000084110 HAL 421521 sc-eQTL 7.96e-01 -0.0237 0.0916 0.769 ncMono L2
ENSG00000111142 METAP2 944366 sc-eQTL 4.99e-01 0.0749 0.111 0.769 ncMono L2
ENSG00000111144 LTA4H 374366 sc-eQTL 9.91e-01 -0.00118 0.102 0.769 ncMono L2
ENSG00000111145 ELK3 223511 sc-eQTL 8.42e-01 0.0175 0.0876 0.769 ncMono L2
ENSG00000139343 SNRPF 558958 sc-eQTL 3.60e-01 0.0819 0.0893 0.769 ncMono L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.98e-03 -0.28 0.093 0.769 ncMono L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 4.22e-01 -0.0871 0.108 0.769 ncMono L2
ENSG00000059758 CDK17 17406 sc-eQTL 1.73e-01 -0.146 0.107 0.754 pDC L2
ENSG00000084110 HAL 421521 sc-eQTL 5.42e-01 -0.0554 0.0907 0.754 pDC L2
ENSG00000111142 METAP2 944366 sc-eQTL 6.37e-01 -0.058 0.123 0.754 pDC L2
ENSG00000111144 LTA4H 374366 sc-eQTL 3.69e-01 -0.0914 0.101 0.754 pDC L2
ENSG00000111145 ELK3 223511 sc-eQTL 9.61e-01 0.00602 0.124 0.754 pDC L2
ENSG00000139343 SNRPF 558958 sc-eQTL 4.97e-01 0.0737 0.108 0.754 pDC L2
ENSG00000139350 NEDD1 -489337 sc-eQTL 3.32e-01 0.116 0.119 0.754 pDC L2
ENSG00000257715 AC007298.1 392563 sc-eQTL 4.07e-01 -0.0852 0.102 0.754 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 17406 sc-eQTL 1.53e-01 -0.0988 0.0689 0.767 B_Memory LOneK1K
ENSG00000111142 METAP2 944366 sc-eQTL 7.11e-01 -0.0357 0.0963 0.767 B_Memory LOneK1K
ENSG00000111144 LTA4H 374366 sc-eQTL 6.52e-01 0.0325 0.0719 0.767 B_Memory LOneK1K
ENSG00000111145 ELK3 223511 sc-eQTL 6.39e-01 -0.0386 0.0822 0.767 B_Memory LOneK1K
ENSG00000136014 USP44 866410 sc-eQTL 7.64e-02 -0.181 0.102 0.767 B_Memory LOneK1K
ENSG00000139343 SNRPF 558958 sc-eQTL 9.57e-01 -0.00429 0.0797 0.767 B_Memory LOneK1K
ENSG00000139350 NEDD1 -489337 sc-eQTL 7.59e-01 0.0321 0.104 0.767 B_Memory LOneK1K
ENSG00000059758 CDK17 17406 sc-eQTL 9.44e-01 -0.00421 0.0599 0.767 B_Naive LOneK1K
ENSG00000111142 METAP2 944366 sc-eQTL 4.49e-01 0.0615 0.081 0.767 B_Naive LOneK1K
ENSG00000111144 LTA4H 374366 sc-eQTL 6.46e-01 0.031 0.0673 0.767 B_Naive LOneK1K
ENSG00000111145 ELK3 223511 sc-eQTL 5.12e-01 -0.0502 0.0765 0.767 B_Naive LOneK1K
ENSG00000136014 USP44 866410 sc-eQTL 1.37e-01 -0.139 0.0932 0.767 B_Naive LOneK1K
ENSG00000139343 SNRPF 558958 sc-eQTL 4.69e-01 -0.0559 0.0771 0.767 B_Naive LOneK1K
ENSG00000139350 NEDD1 -489337 sc-eQTL 8.11e-01 -0.0245 0.102 0.767 B_Naive LOneK1K
ENSG00000059758 CDK17 17406 sc-eQTL 2.82e-05 -0.295 0.0689 0.767 CD14_Mono LOneK1K
ENSG00000084110 HAL 421521 sc-eQTL 8.40e-01 0.0176 0.087 0.767 CD14_Mono LOneK1K
ENSG00000111142 METAP2 944366 sc-eQTL 9.92e-01 0.000801 0.082 0.767 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 374366 sc-eQTL 4.44e-01 0.0732 0.0954 0.767 CD14_Mono LOneK1K
ENSG00000111145 ELK3 223511 sc-eQTL 3.61e-01 0.0631 0.0689 0.767 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 558958 sc-eQTL 6.79e-01 -0.0276 0.0666 0.767 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -489337 sc-eQTL 4.22e-02 -0.211 0.103 0.767 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 392563 sc-eQTL 4.97e-01 0.0658 0.0967 0.767 CD14_Mono LOneK1K
ENSG00000059758 CDK17 17406 sc-eQTL 9.22e-01 -0.0074 0.0757 0.772 CD16_Mono LOneK1K
ENSG00000084110 HAL 421521 sc-eQTL 9.32e-01 -0.00764 0.0894 0.772 CD16_Mono LOneK1K
ENSG00000111142 METAP2 944366 sc-eQTL 8.65e-01 -0.0172 0.101 0.772 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 374366 sc-eQTL 8.11e-01 0.0237 0.0992 0.772 CD16_Mono LOneK1K
ENSG00000111145 ELK3 223511 sc-eQTL 8.59e-01 -0.013 0.0734 0.772 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 558958 sc-eQTL 6.02e-01 0.0395 0.0756 0.772 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -489337 sc-eQTL 1.81e-03 -0.3 0.0948 0.772 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 392563 sc-eQTL 5.40e-01 -0.0631 0.103 0.772 CD16_Mono LOneK1K
ENSG00000059758 CDK17 17406 sc-eQTL 1.65e-01 0.0711 0.051 0.769 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 944366 sc-eQTL 6.04e-01 0.0405 0.0779 0.769 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 374366 sc-eQTL 5.70e-01 0.0506 0.089 0.769 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 223511 sc-eQTL 4.82e-01 -0.0574 0.0814 0.769 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 558958 sc-eQTL 6.58e-02 -0.128 0.0692 0.769 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -489337 sc-eQTL 2.85e-01 -0.093 0.0868 0.769 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000059758 CDK17 17406 eQTL 3.42e-02 -0.0285 0.0134 0.00114 0.0 0.227
ENSG00000139344 AMDHD1 474555 eQTL 0.0177 -0.0894 0.0376 0.0 0.0 0.227
ENSG00000139350 NEDD1 -489337 eQTL 2.7e-06 -0.127 0.0269 0.0 0.0 0.227
ENSG00000188596 CFAP54 -71689 eQTL 6.1e-05 -0.0908 0.0225 0.00101 0.0 0.227

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 \N 223511 4.79e-06 9.31e-06 6.07e-07 3.52e-06 1.08e-06 1.68e-06 5.17e-06 9.62e-07 4.57e-06 1.66e-06 5.26e-06 3.22e-06 7.42e-06 1.73e-06 1.39e-06 2.63e-06 3.61e-06 2.96e-06 1.52e-06 1.09e-06 2.62e-06 4.91e-06 4.42e-06 1.82e-06 6.72e-06 1.35e-06 2.45e-06 1.43e-06 4.38e-06 4.6e-06 2.83e-06 5.42e-07 7.92e-07 1.3e-06 1.92e-06 8.53e-07 1.04e-06 4.49e-07 9.23e-07 3.4e-07 2.14e-07 7.87e-06 6.81e-07 1.8e-07 3.4e-07 3.48e-07 8.93e-07 2.22e-07 1.9e-07
ENSG00000139343 \N 558958 1.09e-06 9.15e-07 1.87e-07 4.15e-07 1.12e-07 3.58e-07 7.25e-07 1.31e-07 5.3e-07 2.26e-07 9.92e-07 3.84e-07 1.05e-06 2.08e-07 3.31e-07 2.69e-07 7.57e-07 4.22e-07 6.4e-07 1.97e-07 2.26e-07 5.76e-07 5.82e-07 1.32e-07 1.02e-06 2.74e-07 3.16e-07 2.68e-07 5.41e-07 1.06e-06 3.95e-07 6.63e-08 9.36e-08 1.19e-07 3.03e-07 1.94e-07 5.61e-07 9.58e-08 1.11e-07 9.5e-09 2.95e-08 1.15e-06 5.81e-08 5.71e-08 7.93e-08 9.49e-09 9.68e-08 7.14e-09 6.03e-08
ENSG00000139350 NEDD1 -489337 1.24e-06 1.19e-06 3.2e-07 9.87e-07 1.54e-07 4.73e-07 1.18e-06 2.25e-07 8.66e-07 3.1e-07 1.26e-06 5.53e-07 1.55e-06 2.9e-07 4.33e-07 4.47e-07 9.26e-07 5.27e-07 7.98e-07 4.38e-07 3.87e-07 1.08e-06 9.22e-07 2.71e-07 1.7e-06 2.55e-07 5.24e-07 3.89e-07 8.81e-07 1.31e-06 5.42e-07 4.44e-08 1.95e-07 1.69e-07 3.57e-07 3.71e-07 7.34e-07 1.12e-07 2.9e-07 1.92e-07 8.81e-08 1.52e-06 1.94e-07 9e-08 1.17e-07 1.29e-08 1.18e-07 2.48e-08 5.26e-08
ENSG00000188596 CFAP54 -71689 1.65e-05 2.95e-05 2.25e-06 1.03e-05 2.4e-06 6.33e-06 2.24e-05 2.18e-06 1.5e-05 5.52e-06 1.94e-05 6.62e-06 3.24e-05 6.13e-06 3.58e-06 6.99e-06 8.19e-06 1e-05 3.61e-06 3.04e-06 6.31e-06 1.32e-05 1.61e-05 3.39e-06 2.67e-05 4.41e-06 6.35e-06 4.64e-06 1.67e-05 1.4e-05 1.06e-05 9.46e-07 1.14e-06 2.94e-06 5.84e-06 2.53e-06 1.72e-06 1.66e-06 2.13e-06 1e-06 6.55e-07 3e-05 1.61e-06 1.76e-07 6.99e-07 1.77e-06 1.28e-06 6.4e-07 5.76e-07
ENSG00000257715 \N 392563 1.28e-06 2.34e-06 2.5e-07 1.26e-06 3.45e-07 6.56e-07 1.41e-06 3.65e-07 1.49e-06 4.24e-07 2.06e-06 7.32e-07 2.51e-06 5.23e-07 4.92e-07 9.33e-07 1.02e-06 8.27e-07 6.91e-07 5.05e-07 7.6e-07 1.97e-06 1.44e-06 6.51e-07 2.28e-06 6.01e-07 9.13e-07 7.16e-07 1.62e-06 1.66e-06 7.8e-07 2.39e-07 2.88e-07 4.83e-07 5.32e-07 4.91e-07 8.12e-07 2.04e-07 5.16e-07 2.04e-07 2.38e-07 2.43e-06 4.41e-07 1.74e-07 1.89e-07 7.16e-08 1.88e-07 8.37e-08 9.42e-08