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Genes within 1Mb (chr12:96413402:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 12922 sc-eQTL 2.27e-01 -0.0629 0.0519 0.722 B L1
ENSG00000111142 METAP2 939882 sc-eQTL 8.49e-01 0.0141 0.0737 0.722 B L1
ENSG00000111144 LTA4H 369882 sc-eQTL 9.52e-01 -0.00388 0.0647 0.722 B L1
ENSG00000111145 ELK3 219027 sc-eQTL 5.93e-01 -0.0368 0.0689 0.722 B L1
ENSG00000136014 USP44 861926 sc-eQTL 1.99e-01 -0.109 0.0846 0.722 B L1
ENSG00000139343 SNRPF 554474 sc-eQTL 1.97e-01 -0.0807 0.0623 0.722 B L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 3.48e-01 0.0857 0.0912 0.722 B L1
ENSG00000059758 CDK17 12922 sc-eQTL 4.65e-01 -0.031 0.0424 0.722 CD4T L1
ENSG00000111142 METAP2 939882 sc-eQTL 5.66e-01 -0.034 0.0592 0.722 CD4T L1
ENSG00000111144 LTA4H 369882 sc-eQTL 1.94e-01 -0.0757 0.0581 0.722 CD4T L1
ENSG00000111145 ELK3 219027 sc-eQTL 7.37e-01 -0.0212 0.0631 0.722 CD4T L1
ENSG00000136014 USP44 861926 sc-eQTL 9.14e-01 0.00979 0.0901 0.722 CD4T L1
ENSG00000139343 SNRPF 554474 sc-eQTL 5.59e-01 -0.0323 0.0551 0.722 CD4T L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.14e-01 0.0343 0.0679 0.722 CD4T L1
ENSG00000059758 CDK17 12922 sc-eQTL 8.86e-02 -0.0739 0.0432 0.722 CD8T L1
ENSG00000111142 METAP2 939882 sc-eQTL 6.01e-01 0.0367 0.0701 0.722 CD8T L1
ENSG00000111144 LTA4H 369882 sc-eQTL 6.12e-01 -0.0237 0.0466 0.722 CD8T L1
ENSG00000111145 ELK3 219027 sc-eQTL 2.21e-02 -0.16 0.0694 0.722 CD8T L1
ENSG00000136014 USP44 861926 sc-eQTL 8.67e-01 0.0134 0.0799 0.722 CD8T L1
ENSG00000139343 SNRPF 554474 sc-eQTL 9.33e-01 0.00485 0.0576 0.722 CD8T L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.21e-01 -0.0173 0.0765 0.722 CD8T L1
ENSG00000059758 CDK17 12922 sc-eQTL 3.54e-01 -0.0755 0.0812 0.721 DC L1
ENSG00000084110 HAL 417037 sc-eQTL 4.40e-01 -0.0715 0.0925 0.721 DC L1
ENSG00000111142 METAP2 939882 sc-eQTL 6.06e-01 -0.0527 0.102 0.721 DC L1
ENSG00000111144 LTA4H 369882 sc-eQTL 7.33e-01 -0.0259 0.0757 0.721 DC L1
ENSG00000111145 ELK3 219027 sc-eQTL 2.97e-01 0.0968 0.0925 0.721 DC L1
ENSG00000139343 SNRPF 554474 sc-eQTL 9.47e-01 0.00517 0.0772 0.721 DC L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 7.30e-01 0.0342 0.099 0.721 DC L1
ENSG00000257715 AC007298.1 388079 sc-eQTL 2.31e-02 -0.202 0.0883 0.721 DC L1
ENSG00000059758 CDK17 12922 sc-eQTL 2.45e-03 -0.198 0.0646 0.722 Mono L1
ENSG00000084110 HAL 417037 sc-eQTL 6.24e-01 -0.0408 0.0832 0.722 Mono L1
ENSG00000111142 METAP2 939882 sc-eQTL 8.08e-01 0.0175 0.0719 0.722 Mono L1
ENSG00000111144 LTA4H 369882 sc-eQTL 6.36e-01 -0.0445 0.0939 0.722 Mono L1
ENSG00000111145 ELK3 219027 sc-eQTL 7.44e-01 0.0206 0.0631 0.722 Mono L1
ENSG00000139343 SNRPF 554474 sc-eQTL 4.41e-01 -0.0458 0.0594 0.722 Mono L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.36e-03 -0.239 0.0899 0.722 Mono L1
ENSG00000257715 AC007298.1 388079 sc-eQTL 9.44e-01 0.00625 0.0885 0.722 Mono L1
ENSG00000059758 CDK17 12922 sc-eQTL 1.97e-01 0.062 0.0479 0.723 NK L1
ENSG00000111142 METAP2 939882 sc-eQTL 5.52e-01 -0.0423 0.0711 0.723 NK L1
ENSG00000111144 LTA4H 369882 sc-eQTL 9.03e-01 -0.00994 0.0816 0.723 NK L1
ENSG00000111145 ELK3 219027 sc-eQTL 9.67e-01 -0.00323 0.0774 0.723 NK L1
ENSG00000139343 SNRPF 554474 sc-eQTL 1.17e-01 -0.1 0.0638 0.723 NK L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.22e-01 -0.0401 0.0812 0.723 NK L1
ENSG00000059758 CDK17 12922 sc-eQTL 7.43e-01 0.0134 0.0407 0.722 Other_T L1
ENSG00000074527 NTN4 622250 sc-eQTL 4.54e-01 -0.0564 0.0752 0.722 Other_T L1
ENSG00000111142 METAP2 939882 sc-eQTL 5.83e-01 0.0427 0.0777 0.722 Other_T L1
ENSG00000111144 LTA4H 369882 sc-eQTL 5.88e-01 -0.0462 0.085 0.722 Other_T L1
ENSG00000111145 ELK3 219027 sc-eQTL 8.20e-01 -0.0151 0.0664 0.722 Other_T L1
ENSG00000139343 SNRPF 554474 sc-eQTL 9.22e-01 0.00605 0.0617 0.722 Other_T L1
ENSG00000139350 NEDD1 -493821 sc-eQTL 3.71e-01 -0.0841 0.0938 0.722 Other_T L1
ENSG00000188596 CFAP54 -76169 sc-eQTL 4.43e-01 0.0748 0.0972 0.722 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 12922 sc-eQTL 7.67e-01 0.027 0.091 0.724 B_Activated L2
ENSG00000111142 METAP2 939882 sc-eQTL 1.08e-01 0.184 0.114 0.724 B_Activated L2
ENSG00000111144 LTA4H 369882 sc-eQTL 9.32e-01 -0.00879 0.103 0.724 B_Activated L2
ENSG00000111145 ELK3 219027 sc-eQTL 6.04e-01 0.0566 0.109 0.724 B_Activated L2
ENSG00000136014 USP44 861926 sc-eQTL 3.08e-01 -0.0854 0.0836 0.724 B_Activated L2
ENSG00000139343 SNRPF 554474 sc-eQTL 6.50e-01 0.0467 0.103 0.724 B_Activated L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 7.06e-01 0.0407 0.108 0.724 B_Activated L2
ENSG00000059758 CDK17 12922 sc-eQTL 9.05e-01 0.00955 0.0802 0.721 B_Intermediate L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.78e-01 -0.0997 0.0917 0.721 B_Intermediate L2
ENSG00000111144 LTA4H 369882 sc-eQTL 6.40e-01 -0.0363 0.0776 0.721 B_Intermediate L2
ENSG00000111145 ELK3 219027 sc-eQTL 2.35e-01 -0.104 0.0873 0.721 B_Intermediate L2
ENSG00000136014 USP44 861926 sc-eQTL 5.06e-01 -0.0688 0.103 0.721 B_Intermediate L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.54e-01 -0.0653 0.0871 0.721 B_Intermediate L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.93e-01 -0.0404 0.102 0.721 B_Intermediate L2
ENSG00000059758 CDK17 12922 sc-eQTL 6.34e-02 -0.144 0.0769 0.724 B_Memory L2
ENSG00000111142 METAP2 939882 sc-eQTL 5.58e-01 0.0591 0.101 0.724 B_Memory L2
ENSG00000111144 LTA4H 369882 sc-eQTL 1.92e-01 -0.117 0.0892 0.724 B_Memory L2
ENSG00000111145 ELK3 219027 sc-eQTL 4.38e-01 -0.0683 0.0879 0.724 B_Memory L2
ENSG00000136014 USP44 861926 sc-eQTL 5.73e-01 -0.0544 0.0965 0.724 B_Memory L2
ENSG00000139343 SNRPF 554474 sc-eQTL 9.90e-01 0.00121 0.0933 0.724 B_Memory L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 5.38e-01 0.0636 0.103 0.724 B_Memory L2
ENSG00000059758 CDK17 12922 sc-eQTL 8.06e-01 -0.0161 0.0651 0.722 B_Naive1 L2
ENSG00000111142 METAP2 939882 sc-eQTL 8.42e-01 0.0168 0.0843 0.722 B_Naive1 L2
ENSG00000111144 LTA4H 369882 sc-eQTL 6.91e-01 -0.0271 0.0682 0.722 B_Naive1 L2
ENSG00000111145 ELK3 219027 sc-eQTL 7.65e-01 -0.0242 0.0806 0.722 B_Naive1 L2
ENSG00000136014 USP44 861926 sc-eQTL 7.27e-01 -0.0354 0.101 0.722 B_Naive1 L2
ENSG00000139343 SNRPF 554474 sc-eQTL 7.60e-01 0.024 0.0784 0.722 B_Naive1 L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 2.35e-01 0.12 0.1 0.722 B_Naive1 L2
ENSG00000059758 CDK17 12922 sc-eQTL 4.78e-01 -0.0579 0.0814 0.723 B_Naive2 L2
ENSG00000111142 METAP2 939882 sc-eQTL 6.38e-01 0.0463 0.0984 0.723 B_Naive2 L2
ENSG00000111144 LTA4H 369882 sc-eQTL 4.16e-01 -0.0629 0.0771 0.723 B_Naive2 L2
ENSG00000111145 ELK3 219027 sc-eQTL 8.30e-01 -0.0196 0.0911 0.723 B_Naive2 L2
ENSG00000136014 USP44 861926 sc-eQTL 8.78e-01 -0.0152 0.0984 0.723 B_Naive2 L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.65e-01 -0.0662 0.0903 0.723 B_Naive2 L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 4.28e-01 -0.0853 0.107 0.723 B_Naive2 L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.85e-01 -0.1 0.0752 0.716 CD4_CTL L2
ENSG00000111142 METAP2 939882 sc-eQTL 9.76e-01 -0.00332 0.108 0.716 CD4_CTL L2
ENSG00000111144 LTA4H 369882 sc-eQTL 8.09e-02 -0.186 0.106 0.716 CD4_CTL L2
ENSG00000111145 ELK3 219027 sc-eQTL 3.23e-02 0.23 0.107 0.716 CD4_CTL L2
ENSG00000136014 USP44 861926 sc-eQTL 6.01e-01 -0.0451 0.0861 0.716 CD4_CTL L2
ENSG00000139343 SNRPF 554474 sc-eQTL 6.05e-01 -0.0486 0.0937 0.716 CD4_CTL L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 1.98e-01 -0.139 0.108 0.716 CD4_CTL L2
ENSG00000059758 CDK17 12922 sc-eQTL 6.25e-01 -0.0227 0.0464 0.722 CD4_Naive L2
ENSG00000111142 METAP2 939882 sc-eQTL 8.15e-01 -0.0157 0.067 0.722 CD4_Naive L2
ENSG00000111144 LTA4H 369882 sc-eQTL 1.81e-01 -0.0898 0.0669 0.722 CD4_Naive L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.86e-01 -0.00117 0.0672 0.722 CD4_Naive L2
ENSG00000136014 USP44 861926 sc-eQTL 6.37e-01 0.0444 0.0941 0.722 CD4_Naive L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.56e-01 -0.0445 0.0596 0.722 CD4_Naive L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 9.12e-01 0.00811 0.0735 0.722 CD4_Naive L2
ENSG00000059758 CDK17 12922 sc-eQTL 5.59e-01 -0.0266 0.0453 0.722 CD4_TCM L2
ENSG00000111142 METAP2 939882 sc-eQTL 1.96e-01 -0.0999 0.077 0.722 CD4_TCM L2
ENSG00000111144 LTA4H 369882 sc-eQTL 9.47e-01 -0.00514 0.077 0.722 CD4_TCM L2
ENSG00000111145 ELK3 219027 sc-eQTL 8.85e-02 -0.129 0.0752 0.722 CD4_TCM L2
ENSG00000136014 USP44 861926 sc-eQTL 7.78e-01 0.0295 0.105 0.722 CD4_TCM L2
ENSG00000139343 SNRPF 554474 sc-eQTL 8.64e-01 0.0106 0.0621 0.722 CD4_TCM L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.86e-02 0.144 0.0843 0.722 CD4_TCM L2
ENSG00000059758 CDK17 12922 sc-eQTL 8.22e-01 0.0126 0.056 0.722 CD4_TEM L2
ENSG00000111142 METAP2 939882 sc-eQTL 4.42e-01 0.072 0.0935 0.722 CD4_TEM L2
ENSG00000111144 LTA4H 369882 sc-eQTL 5.23e-01 -0.0552 0.0864 0.722 CD4_TEM L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.06e-01 0.0095 0.0803 0.722 CD4_TEM L2
ENSG00000136014 USP44 861926 sc-eQTL 6.10e-01 0.0504 0.0988 0.722 CD4_TEM L2
ENSG00000139343 SNRPF 554474 sc-eQTL 9.45e-01 0.00582 0.0841 0.722 CD4_TEM L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.04e-01 -0.0248 0.0997 0.722 CD4_TEM L2
ENSG00000059758 CDK17 12922 sc-eQTL 9.27e-01 -0.00501 0.0545 0.722 CD8_CTL L2
ENSG00000111142 METAP2 939882 sc-eQTL 6.58e-01 0.0418 0.0942 0.722 CD8_CTL L2
ENSG00000111144 LTA4H 369882 sc-eQTL 1.92e-01 -0.128 0.098 0.722 CD8_CTL L2
ENSG00000111145 ELK3 219027 sc-eQTL 7.05e-01 0.034 0.0896 0.722 CD8_CTL L2
ENSG00000136014 USP44 861926 sc-eQTL 9.91e-01 -0.00115 0.0999 0.722 CD8_CTL L2
ENSG00000139343 SNRPF 554474 sc-eQTL 9.50e-01 -0.00515 0.0824 0.722 CD8_CTL L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 4.79e-01 -0.0654 0.0923 0.722 CD8_CTL L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.79e-01 -0.0874 0.0648 0.722 CD8_Naive L2
ENSG00000111142 METAP2 939882 sc-eQTL 4.93e-01 -0.0593 0.0863 0.722 CD8_Naive L2
ENSG00000111144 LTA4H 369882 sc-eQTL 7.24e-01 0.0276 0.0779 0.722 CD8_Naive L2
ENSG00000111145 ELK3 219027 sc-eQTL 2.42e-02 -0.185 0.0814 0.722 CD8_Naive L2
ENSG00000136014 USP44 861926 sc-eQTL 9.97e-01 0.000315 0.0866 0.722 CD8_Naive L2
ENSG00000139343 SNRPF 554474 sc-eQTL 8.35e-01 -0.0154 0.0741 0.722 CD8_Naive L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.75e-01 0.037 0.0882 0.722 CD8_Naive L2
ENSG00000059758 CDK17 12922 sc-eQTL 9.87e-01 0.00116 0.0698 0.718 CD8_TCM L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.79e-01 0.113 0.104 0.718 CD8_TCM L2
ENSG00000111144 LTA4H 369882 sc-eQTL 1.85e-01 0.136 0.102 0.718 CD8_TCM L2
ENSG00000111145 ELK3 219027 sc-eQTL 2.33e-01 -0.103 0.0866 0.718 CD8_TCM L2
ENSG00000136014 USP44 861926 sc-eQTL 5.35e-01 0.0584 0.094 0.718 CD8_TCM L2
ENSG00000139343 SNRPF 554474 sc-eQTL 9.88e-01 -0.00154 0.1 0.718 CD8_TCM L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 7.16e-01 -0.0356 0.0979 0.718 CD8_TCM L2
ENSG00000059758 CDK17 12922 sc-eQTL 8.13e-01 -0.0212 0.0893 0.728 CD8_TEM L2
ENSG00000111142 METAP2 939882 sc-eQTL 5.45e-02 0.201 0.104 0.728 CD8_TEM L2
ENSG00000111144 LTA4H 369882 sc-eQTL 5.50e-01 0.0654 0.109 0.728 CD8_TEM L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.80e-01 -0.00267 0.108 0.728 CD8_TEM L2
ENSG00000136014 USP44 861926 sc-eQTL 6.29e-02 -0.17 0.0907 0.728 CD8_TEM L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.50e-01 0.0756 0.0998 0.728 CD8_TEM L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 1.54e-01 -0.154 0.108 0.728 CD8_TEM L2
ENSG00000059758 CDK17 12922 sc-eQTL 2.30e-01 -0.0698 0.0579 0.721 MAIT L2
ENSG00000074527 NTN4 622250 sc-eQTL 9.82e-01 0.00179 0.0783 0.721 MAIT L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.76e-01 0.107 0.0984 0.721 MAIT L2
ENSG00000111144 LTA4H 369882 sc-eQTL 4.25e-01 0.0716 0.0896 0.721 MAIT L2
ENSG00000111145 ELK3 219027 sc-eQTL 4.21e-01 -0.0607 0.0752 0.721 MAIT L2
ENSG00000139343 SNRPF 554474 sc-eQTL 6.80e-01 -0.036 0.0873 0.721 MAIT L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.28e-01 0.0213 0.098 0.721 MAIT L2
ENSG00000188596 CFAP54 -76169 sc-eQTL 9.20e-01 0.00974 0.0972 0.721 MAIT L2
ENSG00000059758 CDK17 12922 sc-eQTL 5.64e-02 0.116 0.0606 0.72 NK_CD56bright L2
ENSG00000111142 METAP2 939882 sc-eQTL 5.75e-01 0.0579 0.103 0.72 NK_CD56bright L2
ENSG00000111144 LTA4H 369882 sc-eQTL 2.16e-01 0.112 0.0902 0.72 NK_CD56bright L2
ENSG00000111145 ELK3 219027 sc-eQTL 1.69e-01 0.132 0.0956 0.72 NK_CD56bright L2
ENSG00000139343 SNRPF 554474 sc-eQTL 9.04e-01 -0.0121 0.1 0.72 NK_CD56bright L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 5.56e-01 -0.0598 0.101 0.72 NK_CD56bright L2
ENSG00000059758 CDK17 12922 sc-eQTL 7.98e-02 0.091 0.0517 0.722 NK_CD56dim L2
ENSG00000111142 METAP2 939882 sc-eQTL 9.23e-01 0.0088 0.0913 0.722 NK_CD56dim L2
ENSG00000111144 LTA4H 369882 sc-eQTL 9.63e-01 -0.00442 0.0941 0.722 NK_CD56dim L2
ENSG00000111145 ELK3 219027 sc-eQTL 3.87e-01 -0.0721 0.0832 0.722 NK_CD56dim L2
ENSG00000139343 SNRPF 554474 sc-eQTL 1.21e-01 -0.123 0.0788 0.722 NK_CD56dim L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.63e-01 0.0398 0.0913 0.722 NK_CD56dim L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.35e-01 -0.121 0.0805 0.719 NK_HLA L2
ENSG00000111142 METAP2 939882 sc-eQTL 7.49e-01 -0.0327 0.102 0.719 NK_HLA L2
ENSG00000111144 LTA4H 369882 sc-eQTL 4.79e-02 -0.209 0.105 0.719 NK_HLA L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.11e-01 -0.011 0.0985 0.719 NK_HLA L2
ENSG00000139343 SNRPF 554474 sc-eQTL 5.28e-01 -0.0648 0.103 0.719 NK_HLA L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 1.47e-01 -0.141 0.0966 0.719 NK_HLA L2
ENSG00000059758 CDK17 12922 sc-eQTL 4.49e-01 0.043 0.0568 0.722 NK_cytokine L2
ENSG00000111142 METAP2 939882 sc-eQTL 9.83e-01 -0.00204 0.0944 0.722 NK_cytokine L2
ENSG00000111144 LTA4H 369882 sc-eQTL 4.96e-01 -0.0654 0.096 0.722 NK_cytokine L2
ENSG00000111145 ELK3 219027 sc-eQTL 6.88e-01 0.037 0.092 0.722 NK_cytokine L2
ENSG00000139343 SNRPF 554474 sc-eQTL 3.89e-01 -0.0671 0.0778 0.722 NK_cytokine L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.44e-01 -0.019 0.0964 0.722 NK_cytokine L2
ENSG00000059758 CDK17 12922 sc-eQTL 9.32e-02 -0.198 0.117 0.733 PB L2
ENSG00000111142 METAP2 939882 sc-eQTL 7.89e-02 0.242 0.136 0.733 PB L2
ENSG00000111144 LTA4H 369882 sc-eQTL 6.57e-01 -0.0463 0.104 0.733 PB L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.69e-01 0.00526 0.134 0.733 PB L2
ENSG00000136014 USP44 861926 sc-eQTL 3.35e-01 -0.119 0.123 0.733 PB L2
ENSG00000139343 SNRPF 554474 sc-eQTL 5.95e-01 -0.0694 0.13 0.733 PB L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 4.76e-01 0.111 0.155 0.733 PB L2
ENSG00000059758 CDK17 12922 sc-eQTL 7.63e-01 -0.0192 0.0638 0.722 Pro_T L2
ENSG00000074527 NTN4 622250 sc-eQTL 8.35e-01 -0.0149 0.0716 0.722 Pro_T L2
ENSG00000111142 METAP2 939882 sc-eQTL 9.63e-01 -0.00391 0.0846 0.722 Pro_T L2
ENSG00000111144 LTA4H 369882 sc-eQTL 3.21e-01 -0.0835 0.0841 0.722 Pro_T L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.03e-02 -0.172 0.101 0.722 Pro_T L2
ENSG00000139343 SNRPF 554474 sc-eQTL 2.15e-01 0.0796 0.064 0.722 Pro_T L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 2.82e-01 -0.1 0.0931 0.722 Pro_T L2
ENSG00000188596 CFAP54 -76169 sc-eQTL 3.25e-01 0.0743 0.0753 0.722 Pro_T L2
ENSG00000059758 CDK17 12922 sc-eQTL 8.53e-01 -0.0131 0.0708 0.722 Treg L2
ENSG00000111142 METAP2 939882 sc-eQTL 8.93e-01 0.013 0.0963 0.722 Treg L2
ENSG00000111144 LTA4H 369882 sc-eQTL 7.78e-01 0.0253 0.0896 0.722 Treg L2
ENSG00000111145 ELK3 219027 sc-eQTL 3.70e-01 -0.0728 0.0811 0.722 Treg L2
ENSG00000136014 USP44 861926 sc-eQTL 3.54e-01 0.0846 0.091 0.722 Treg L2
ENSG00000139343 SNRPF 554474 sc-eQTL 8.67e-01 0.0157 0.094 0.722 Treg L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 9.00e-01 -0.0132 0.105 0.722 Treg L2
ENSG00000059758 CDK17 12922 sc-eQTL 8.42e-01 -0.0171 0.0857 0.712 cDC L2
ENSG00000084110 HAL 417037 sc-eQTL 8.92e-01 0.0121 0.0891 0.712 cDC L2
ENSG00000111142 METAP2 939882 sc-eQTL 4.51e-01 0.0812 0.107 0.712 cDC L2
ENSG00000111144 LTA4H 369882 sc-eQTL 8.55e-01 -0.014 0.0764 0.712 cDC L2
ENSG00000111145 ELK3 219027 sc-eQTL 3.56e-01 0.0931 0.101 0.712 cDC L2
ENSG00000139343 SNRPF 554474 sc-eQTL 1.58e-01 -0.119 0.0839 0.712 cDC L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 5.77e-01 0.0575 0.103 0.712 cDC L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 1.89e-01 -0.114 0.0863 0.712 cDC L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.16e-07 -0.388 0.0706 0.722 cMono_IL1B L2
ENSG00000084110 HAL 417037 sc-eQTL 5.04e-01 -0.0551 0.0823 0.722 cMono_IL1B L2
ENSG00000111142 METAP2 939882 sc-eQTL 5.87e-01 0.0465 0.0854 0.722 cMono_IL1B L2
ENSG00000111144 LTA4H 369882 sc-eQTL 6.34e-01 -0.0424 0.0889 0.722 cMono_IL1B L2
ENSG00000111145 ELK3 219027 sc-eQTL 6.85e-01 -0.0278 0.0685 0.722 cMono_IL1B L2
ENSG00000139343 SNRPF 554474 sc-eQTL 8.10e-01 -0.017 0.0707 0.722 cMono_IL1B L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.89e-02 -0.177 0.0966 0.722 cMono_IL1B L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 4.08e-01 0.0752 0.0907 0.722 cMono_IL1B L2
ENSG00000059758 CDK17 12922 sc-eQTL 2.81e-02 -0.188 0.085 0.722 cMono_S100A L2
ENSG00000084110 HAL 417037 sc-eQTL 4.55e-01 0.0722 0.0964 0.722 cMono_S100A L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.48e-01 0.113 0.0974 0.722 cMono_S100A L2
ENSG00000111144 LTA4H 369882 sc-eQTL 7.29e-01 -0.0334 0.0964 0.722 cMono_S100A L2
ENSG00000111145 ELK3 219027 sc-eQTL 3.57e-01 0.0724 0.0784 0.722 cMono_S100A L2
ENSG00000139343 SNRPF 554474 sc-eQTL 2.82e-01 -0.0835 0.0774 0.722 cMono_S100A L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 1.31e-01 -0.158 0.104 0.722 cMono_S100A L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 8.41e-01 -0.0198 0.0986 0.722 cMono_S100A L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.46e-01 0.117 0.0803 0.706 gdT L2
ENSG00000074527 NTN4 622250 sc-eQTL 6.36e-01 -0.0439 0.0928 0.706 gdT L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.99e-01 0.121 0.116 0.706 gdT L2
ENSG00000111144 LTA4H 369882 sc-eQTL 2.95e-01 -0.127 0.121 0.706 gdT L2
ENSG00000111145 ELK3 219027 sc-eQTL 1.77e-01 0.151 0.111 0.706 gdT L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.67e-02 0.214 0.107 0.706 gdT L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 7.11e-01 0.0443 0.119 0.706 gdT L2
ENSG00000188596 CFAP54 -76169 sc-eQTL 1.81e-01 0.14 0.104 0.706 gdT L2
ENSG00000059758 CDK17 12922 sc-eQTL 6.09e-01 0.0489 0.0955 0.72 intMono L2
ENSG00000084110 HAL 417037 sc-eQTL 9.42e-01 -0.00708 0.0966 0.72 intMono L2
ENSG00000111142 METAP2 939882 sc-eQTL 4.07e-01 -0.0907 0.109 0.72 intMono L2
ENSG00000111144 LTA4H 369882 sc-eQTL 3.25e-01 -0.0977 0.0989 0.72 intMono L2
ENSG00000111145 ELK3 219027 sc-eQTL 9.91e-01 -0.000942 0.0883 0.72 intMono L2
ENSG00000139343 SNRPF 554474 sc-eQTL 2.38e-01 -0.111 0.094 0.72 intMono L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 3.24e-01 -0.0967 0.0978 0.72 intMono L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 5.29e-01 0.0621 0.0985 0.72 intMono L2
ENSG00000059758 CDK17 12922 sc-eQTL 9.03e-01 0.00953 0.078 0.722 ncMono L2
ENSG00000084110 HAL 417037 sc-eQTL 3.28e-01 -0.0852 0.0868 0.722 ncMono L2
ENSG00000111142 METAP2 939882 sc-eQTL 3.77e-01 0.0931 0.105 0.722 ncMono L2
ENSG00000111144 LTA4H 369882 sc-eQTL 4.47e-01 -0.0738 0.0969 0.722 ncMono L2
ENSG00000111145 ELK3 219027 sc-eQTL 8.04e-01 0.0207 0.0833 0.722 ncMono L2
ENSG00000139343 SNRPF 554474 sc-eQTL 6.04e-01 0.0442 0.085 0.722 ncMono L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 7.12e-03 -0.241 0.0887 0.722 ncMono L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 6.13e-01 -0.0522 0.103 0.722 ncMono L2
ENSG00000059758 CDK17 12922 sc-eQTL 1.08e-01 -0.164 0.102 0.709 pDC L2
ENSG00000084110 HAL 417037 sc-eQTL 5.85e-01 -0.0473 0.0865 0.709 pDC L2
ENSG00000111142 METAP2 939882 sc-eQTL 2.05e-01 -0.148 0.116 0.709 pDC L2
ENSG00000111144 LTA4H 369882 sc-eQTL 7.20e-01 -0.0348 0.0969 0.709 pDC L2
ENSG00000111145 ELK3 219027 sc-eQTL 4.11e-01 0.0976 0.118 0.709 pDC L2
ENSG00000139343 SNRPF 554474 sc-eQTL 4.60e-01 0.0766 0.103 0.709 pDC L2
ENSG00000139350 NEDD1 -493821 sc-eQTL 3.87e-01 0.0987 0.114 0.709 pDC L2
ENSG00000257715 AC007298.1 388079 sc-eQTL 6.42e-01 -0.0456 0.0978 0.709 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 12922 sc-eQTL 3.62e-01 -0.0617 0.0674 0.722 B_Memory LOneK1K
ENSG00000111142 METAP2 939882 sc-eQTL 4.76e-01 -0.0671 0.0938 0.722 B_Memory LOneK1K
ENSG00000111144 LTA4H 369882 sc-eQTL 5.98e-01 -0.037 0.0701 0.722 B_Memory LOneK1K
ENSG00000111145 ELK3 219027 sc-eQTL 2.77e-01 -0.0872 0.08 0.722 B_Memory LOneK1K
ENSG00000136014 USP44 861926 sc-eQTL 2.35e-01 -0.119 0.0996 0.722 B_Memory LOneK1K
ENSG00000139343 SNRPF 554474 sc-eQTL 6.08e-01 -0.0399 0.0777 0.722 B_Memory LOneK1K
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.70e-01 0.0435 0.102 0.722 B_Memory LOneK1K
ENSG00000059758 CDK17 12922 sc-eQTL 4.16e-01 -0.0472 0.058 0.722 B_Naive LOneK1K
ENSG00000111142 METAP2 939882 sc-eQTL 4.75e-01 0.0562 0.0785 0.722 B_Naive LOneK1K
ENSG00000111144 LTA4H 369882 sc-eQTL 5.22e-01 -0.0417 0.0651 0.722 B_Naive LOneK1K
ENSG00000111145 ELK3 219027 sc-eQTL 3.78e-01 -0.0655 0.0741 0.722 B_Naive LOneK1K
ENSG00000136014 USP44 861926 sc-eQTL 6.81e-01 -0.0373 0.0907 0.722 B_Naive LOneK1K
ENSG00000139343 SNRPF 554474 sc-eQTL 4.13e-01 -0.0613 0.0746 0.722 B_Naive LOneK1K
ENSG00000139350 NEDD1 -493821 sc-eQTL 5.57e-01 0.0581 0.0988 0.722 B_Naive LOneK1K
ENSG00000059758 CDK17 12922 sc-eQTL 3.28e-07 -0.341 0.0646 0.722 CD14_Mono LOneK1K
ENSG00000084110 HAL 417037 sc-eQTL 7.04e-01 -0.0316 0.0832 0.722 CD14_Mono LOneK1K
ENSG00000111142 METAP2 939882 sc-eQTL 5.71e-01 0.0444 0.0783 0.722 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 369882 sc-eQTL 8.77e-01 -0.0141 0.0913 0.722 CD14_Mono LOneK1K
ENSG00000111145 ELK3 219027 sc-eQTL 6.93e-01 0.0261 0.066 0.722 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 554474 sc-eQTL 5.18e-01 -0.0412 0.0636 0.722 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -493821 sc-eQTL 6.11e-02 -0.187 0.099 0.722 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 388079 sc-eQTL 6.83e-01 0.0379 0.0925 0.722 CD14_Mono LOneK1K
ENSG00000059758 CDK17 12922 sc-eQTL 7.67e-01 0.0211 0.0711 0.724 CD16_Mono LOneK1K
ENSG00000084110 HAL 417037 sc-eQTL 5.01e-01 -0.0565 0.0839 0.724 CD16_Mono LOneK1K
ENSG00000111142 METAP2 939882 sc-eQTL 6.26e-01 -0.0465 0.0953 0.724 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 369882 sc-eQTL 4.54e-01 -0.0698 0.093 0.724 CD16_Mono LOneK1K
ENSG00000111145 ELK3 219027 sc-eQTL 9.48e-01 -0.00452 0.0689 0.724 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 554474 sc-eQTL 8.83e-01 -0.0105 0.0711 0.724 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -493821 sc-eQTL 1.28e-02 -0.226 0.0898 0.724 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 388079 sc-eQTL 8.57e-01 -0.0175 0.0965 0.724 CD16_Mono LOneK1K
ENSG00000059758 CDK17 12922 sc-eQTL 4.25e-01 0.0388 0.0486 0.722 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 939882 sc-eQTL 5.30e-01 -0.0466 0.074 0.722 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 369882 sc-eQTL 5.21e-01 -0.0543 0.0846 0.722 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 219027 sc-eQTL 6.26e-01 -0.0378 0.0774 0.722 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 554474 sc-eQTL 5.75e-02 -0.126 0.0657 0.722 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -493821 sc-eQTL 8.61e-01 -0.0145 0.0827 0.722 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 219027 eQTL 0.0381 -0.0386 0.0186 0.0 0.0 0.267
ENSG00000139350 NEDD1 -493821 eQTL 8.98e-05 -0.101 0.0257 0.0 0.0 0.267
ENSG00000188596 CFAP54 -76173 eQTL 5.96e-06 -0.0974 0.0214 0.00421 0.00289 0.267

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 219027 2.17e-06 2.46e-06 2.74e-07 1.76e-06 4.7e-07 7.29e-07 1.56e-06 3.9e-07 1.74e-06 7.36e-07 2.45e-06 1.35e-06 3.47e-06 1.1e-06 5.05e-07 1.23e-06 9.46e-07 1.92e-06 5.76e-07 7.22e-07 6.35e-07 2.32e-06 1.88e-06 9.76e-07 3.48e-06 9.84e-07 1.14e-06 1.38e-06 1.88e-06 1.88e-06 1.19e-06 2.31e-07 3.95e-07 9.6e-07 9.09e-07 7.08e-07 6.81e-07 3.68e-07 6.01e-07 1.87e-07 3.4e-07 3.33e-06 3.68e-07 2.15e-07 3.45e-07 2.99e-07 3.8e-07 2.49e-07 2.79e-07
ENSG00000188596 CFAP54 -76173 6.67e-06 9.31e-06 8.81e-07 4.31e-06 1.72e-06 2.56e-06 9.61e-06 1.29e-06 6.1e-06 4.22e-06 1.04e-05 4.5e-06 1.16e-05 3.68e-06 1.69e-06 5.06e-06 3.76e-06 4.73e-06 2.18e-06 2.01e-06 3.42e-06 7.66e-06 6.42e-06 2.42e-06 1.19e-05 2.21e-06 3.51e-06 2.66e-06 7.52e-06 7.98e-06 4.17e-06 5.42e-07 6.72e-07 2.73e-06 2.59e-06 2.1e-06 1.11e-06 6.96e-07 1.32e-06 8.9e-07 7.2e-07 9.93e-06 8.18e-07 1.64e-07 7.17e-07 1.02e-06 9.45e-07 6.91e-07 6.03e-07