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Genes within 1Mb (chr12:96398137:G:GT):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -2343 sc-eQTL 9.69e-01 0.0019 0.0485 0.665 B L1
ENSG00000111142 METAP2 924617 sc-eQTL 9.29e-01 -0.00614 0.0686 0.665 B L1
ENSG00000111144 LTA4H 354617 sc-eQTL 4.98e-01 0.0408 0.0602 0.665 B L1
ENSG00000111145 ELK3 203762 sc-eQTL 2.41e-01 -0.0751 0.0639 0.665 B L1
ENSG00000136014 USP44 846661 sc-eQTL 7.00e-01 -0.0305 0.079 0.665 B L1
ENSG00000139343 SNRPF 539209 sc-eQTL 8.63e-01 0.0101 0.0582 0.665 B L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 5.86e-01 0.0463 0.085 0.665 B L1
ENSG00000059758 CDK17 -2343 sc-eQTL 9.23e-01 -0.00387 0.0401 0.665 CD4T L1
ENSG00000111142 METAP2 924617 sc-eQTL 7.87e-01 0.0151 0.0559 0.665 CD4T L1
ENSG00000111144 LTA4H 354617 sc-eQTL 1.68e-02 -0.131 0.0543 0.665 CD4T L1
ENSG00000111145 ELK3 203762 sc-eQTL 3.94e-01 -0.0508 0.0595 0.665 CD4T L1
ENSG00000136014 USP44 846661 sc-eQTL 6.80e-01 -0.0351 0.085 0.665 CD4T L1
ENSG00000139343 SNRPF 539209 sc-eQTL 7.33e-01 -0.0178 0.0521 0.665 CD4T L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.67e-01 0.00269 0.0642 0.665 CD4T L1
ENSG00000059758 CDK17 -2343 sc-eQTL 7.38e-01 0.0137 0.041 0.665 CD8T L1
ENSG00000111142 METAP2 924617 sc-eQTL 5.22e-01 0.0424 0.0661 0.665 CD8T L1
ENSG00000111144 LTA4H 354617 sc-eQTL 6.45e-01 -0.0203 0.044 0.665 CD8T L1
ENSG00000111145 ELK3 203762 sc-eQTL 5.68e-01 -0.0379 0.0662 0.665 CD8T L1
ENSG00000136014 USP44 846661 sc-eQTL 7.20e-01 -0.027 0.0753 0.665 CD8T L1
ENSG00000139343 SNRPF 539209 sc-eQTL 4.57e-01 0.0404 0.0542 0.665 CD8T L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 4.18e-02 -0.146 0.0715 0.665 CD8T L1
ENSG00000059758 CDK17 -2343 sc-eQTL 8.05e-01 -0.0186 0.075 0.66 DC L1
ENSG00000084110 HAL 401772 sc-eQTL 3.46e-01 0.0806 0.0852 0.66 DC L1
ENSG00000111142 METAP2 924617 sc-eQTL 8.29e-01 0.0203 0.0942 0.66 DC L1
ENSG00000111144 LTA4H 354617 sc-eQTL 9.41e-01 0.00514 0.0699 0.66 DC L1
ENSG00000111145 ELK3 203762 sc-eQTL 6.62e-02 0.157 0.0848 0.66 DC L1
ENSG00000139343 SNRPF 539209 sc-eQTL 8.63e-01 -0.0123 0.0712 0.66 DC L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 6.21e-01 0.0452 0.0913 0.66 DC L1
ENSG00000257715 AC007298.1 372814 sc-eQTL 2.92e-01 -0.0869 0.0823 0.66 DC L1
ENSG00000059758 CDK17 -2343 sc-eQTL 2.92e-02 -0.138 0.0629 0.665 Mono L1
ENSG00000084110 HAL 401772 sc-eQTL 7.59e-02 0.142 0.0795 0.665 Mono L1
ENSG00000111142 METAP2 924617 sc-eQTL 2.45e-01 0.0804 0.069 0.665 Mono L1
ENSG00000111144 LTA4H 354617 sc-eQTL 6.89e-01 0.0362 0.0904 0.665 Mono L1
ENSG00000111145 ELK3 203762 sc-eQTL 8.02e-01 0.0152 0.0607 0.665 Mono L1
ENSG00000139343 SNRPF 539209 sc-eQTL 1.17e-01 -0.0897 0.0569 0.665 Mono L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.43e-01 -0.0834 0.0878 0.665 Mono L1
ENSG00000257715 AC007298.1 372814 sc-eQTL 2.80e-01 0.0921 0.085 0.665 Mono L1
ENSG00000059758 CDK17 -2343 sc-eQTL 1.35e-02 0.111 0.0445 0.665 NK L1
ENSG00000111142 METAP2 924617 sc-eQTL 6.77e-01 -0.0279 0.0668 0.665 NK L1
ENSG00000111144 LTA4H 354617 sc-eQTL 7.18e-01 -0.0276 0.0766 0.665 NK L1
ENSG00000111145 ELK3 203762 sc-eQTL 5.87e-01 0.0395 0.0726 0.665 NK L1
ENSG00000139343 SNRPF 539209 sc-eQTL 3.92e-01 -0.0516 0.0602 0.665 NK L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.64e-02 -0.159 0.0755 0.665 NK L1
ENSG00000059758 CDK17 -2343 sc-eQTL 2.15e-01 -0.0468 0.0376 0.665 Other_T L1
ENSG00000074527 NTN4 606985 sc-eQTL 9.30e-01 -0.00616 0.0698 0.665 Other_T L1
ENSG00000111142 METAP2 924617 sc-eQTL 5.18e-01 0.0466 0.072 0.665 Other_T L1
ENSG00000111144 LTA4H 354617 sc-eQTL 6.03e-01 -0.0411 0.0789 0.665 Other_T L1
ENSG00000111145 ELK3 203762 sc-eQTL 9.39e-01 0.00471 0.0616 0.665 Other_T L1
ENSG00000139343 SNRPF 539209 sc-eQTL 9.35e-01 -0.00466 0.0573 0.665 Other_T L1
ENSG00000139350 NEDD1 -509086 sc-eQTL 6.20e-01 -0.0433 0.0871 0.665 Other_T L1
ENSG00000188596 CFAP54 -91434 sc-eQTL 9.80e-01 0.00231 0.0903 0.665 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -2343 sc-eQTL 7.99e-01 -0.0222 0.0871 0.663 B_Activated L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.73e-02 0.208 0.109 0.663 B_Activated L2
ENSG00000111144 LTA4H 354617 sc-eQTL 7.83e-01 0.0272 0.0987 0.663 B_Activated L2
ENSG00000111145 ELK3 203762 sc-eQTL 1.76e-01 0.141 0.104 0.663 B_Activated L2
ENSG00000136014 USP44 846661 sc-eQTL 6.93e-01 -0.0317 0.0802 0.663 B_Activated L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.59e-01 -0.0175 0.0985 0.663 B_Activated L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 6.84e-01 -0.042 0.103 0.663 B_Activated L2
ENSG00000059758 CDK17 -2343 sc-eQTL 8.52e-01 -0.0139 0.0743 0.663 B_Intermediate L2
ENSG00000111142 METAP2 924617 sc-eQTL 8.29e-01 -0.0184 0.0852 0.663 B_Intermediate L2
ENSG00000111144 LTA4H 354617 sc-eQTL 6.25e-01 0.0352 0.0719 0.663 B_Intermediate L2
ENSG00000111145 ELK3 203762 sc-eQTL 2.79e-01 -0.0877 0.0809 0.663 B_Intermediate L2
ENSG00000136014 USP44 846661 sc-eQTL 4.22e-01 -0.0768 0.0955 0.663 B_Intermediate L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.03e-01 -0.0201 0.0808 0.663 B_Intermediate L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.50e-01 -0.0885 0.0944 0.663 B_Intermediate L2
ENSG00000059758 CDK17 -2343 sc-eQTL 8.42e-01 0.0145 0.0727 0.662 B_Memory L2
ENSG00000111142 METAP2 924617 sc-eQTL 4.58e-01 0.0702 0.0944 0.662 B_Memory L2
ENSG00000111144 LTA4H 354617 sc-eQTL 5.98e-01 0.0443 0.0839 0.662 B_Memory L2
ENSG00000111145 ELK3 203762 sc-eQTL 5.26e-01 -0.0523 0.0824 0.662 B_Memory L2
ENSG00000136014 USP44 846661 sc-eQTL 7.69e-01 0.0266 0.0905 0.662 B_Memory L2
ENSG00000139343 SNRPF 539209 sc-eQTL 1.62e-01 0.122 0.087 0.662 B_Memory L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 1.04e-01 -0.157 0.0961 0.662 B_Memory L2
ENSG00000059758 CDK17 -2343 sc-eQTL 2.85e-01 -0.0645 0.0603 0.665 B_Naive1 L2
ENSG00000111142 METAP2 924617 sc-eQTL 6.39e-01 -0.0367 0.0781 0.665 B_Naive1 L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.78e-01 -0.00175 0.0633 0.665 B_Naive1 L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.37e-01 -0.0353 0.0748 0.665 B_Naive1 L2
ENSG00000136014 USP44 846661 sc-eQTL 4.93e-01 -0.0645 0.094 0.665 B_Naive1 L2
ENSG00000139343 SNRPF 539209 sc-eQTL 4.46e-01 0.0555 0.0727 0.665 B_Naive1 L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.11e-01 0.0224 0.0933 0.665 B_Naive1 L2
ENSG00000059758 CDK17 -2343 sc-eQTL 5.39e-01 0.0462 0.075 0.663 B_Naive2 L2
ENSG00000111142 METAP2 924617 sc-eQTL 4.34e-01 0.0709 0.0905 0.663 B_Naive2 L2
ENSG00000111144 LTA4H 354617 sc-eQTL 6.46e-01 0.0328 0.0711 0.663 B_Naive2 L2
ENSG00000111145 ELK3 203762 sc-eQTL 7.64e-01 -0.0252 0.0839 0.663 B_Naive2 L2
ENSG00000136014 USP44 846661 sc-eQTL 4.66e-01 -0.0661 0.0905 0.663 B_Naive2 L2
ENSG00000139343 SNRPF 539209 sc-eQTL 1.28e-01 0.127 0.0828 0.663 B_Naive2 L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.31e-02 0.171 0.0984 0.663 B_Naive2 L2
ENSG00000059758 CDK17 -2343 sc-eQTL 8.30e-01 -0.0151 0.0702 0.659 CD4_CTL L2
ENSG00000111142 METAP2 924617 sc-eQTL 2.92e-01 0.106 0.1 0.659 CD4_CTL L2
ENSG00000111144 LTA4H 354617 sc-eQTL 5.83e-02 -0.187 0.0982 0.659 CD4_CTL L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.39e-01 0.0472 0.1 0.659 CD4_CTL L2
ENSG00000136014 USP44 846661 sc-eQTL 4.46e-01 0.061 0.0799 0.659 CD4_CTL L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.60e-01 -0.0154 0.0872 0.659 CD4_CTL L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.49e-01 -0.0944 0.101 0.659 CD4_CTL L2
ENSG00000059758 CDK17 -2343 sc-eQTL 5.76e-01 0.0248 0.0443 0.665 CD4_Naive L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.88e-01 0.0346 0.0638 0.665 CD4_Naive L2
ENSG00000111144 LTA4H 354617 sc-eQTL 2.48e-03 -0.192 0.0627 0.665 CD4_Naive L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.09e-01 -0.0328 0.064 0.665 CD4_Naive L2
ENSG00000136014 USP44 846661 sc-eQTL 6.94e-01 -0.0354 0.0897 0.665 CD4_Naive L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.12e-01 -0.0135 0.0569 0.665 CD4_Naive L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.29e-01 -0.0685 0.0699 0.665 CD4_Naive L2
ENSG00000059758 CDK17 -2343 sc-eQTL 4.83e-01 -0.0301 0.0428 0.665 CD4_TCM L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.61e-01 -0.0425 0.073 0.665 CD4_TCM L2
ENSG00000111144 LTA4H 354617 sc-eQTL 5.50e-01 0.0435 0.0727 0.665 CD4_TCM L2
ENSG00000111145 ELK3 203762 sc-eQTL 2.51e-01 -0.0821 0.0714 0.665 CD4_TCM L2
ENSG00000136014 USP44 846661 sc-eQTL 9.87e-01 -0.00156 0.099 0.665 CD4_TCM L2
ENSG00000139343 SNRPF 539209 sc-eQTL 9.47e-01 0.00389 0.0587 0.665 CD4_TCM L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 2.74e-01 0.0877 0.08 0.665 CD4_TCM L2
ENSG00000059758 CDK17 -2343 sc-eQTL 1.73e-01 0.0712 0.0521 0.665 CD4_TEM L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.67e-01 0.0501 0.0874 0.665 CD4_TEM L2
ENSG00000111144 LTA4H 354617 sc-eQTL 5.61e-01 -0.047 0.0807 0.665 CD4_TEM L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.54e-01 -0.0337 0.075 0.665 CD4_TEM L2
ENSG00000136014 USP44 846661 sc-eQTL 9.84e-01 -0.00189 0.0923 0.665 CD4_TEM L2
ENSG00000139343 SNRPF 539209 sc-eQTL 1.23e-01 -0.121 0.0781 0.665 CD4_TEM L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.67e-01 0.084 0.093 0.665 CD4_TEM L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.53e-01 0.0481 0.0516 0.665 CD8_CTL L2
ENSG00000111142 METAP2 924617 sc-eQTL 6.23e-01 -0.044 0.0893 0.665 CD8_CTL L2
ENSG00000111144 LTA4H 354617 sc-eQTL 6.97e-01 -0.0363 0.0933 0.665 CD8_CTL L2
ENSG00000111145 ELK3 203762 sc-eQTL 1.15e-01 0.134 0.0845 0.665 CD8_CTL L2
ENSG00000136014 USP44 846661 sc-eQTL 8.71e-01 0.0154 0.0947 0.665 CD8_CTL L2
ENSG00000139343 SNRPF 539209 sc-eQTL 6.90e-01 -0.0312 0.0781 0.665 CD8_CTL L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.83e-01 -0.00192 0.0876 0.665 CD8_CTL L2
ENSG00000059758 CDK17 -2343 sc-eQTL 7.16e-01 -0.0223 0.0613 0.665 CD8_Naive L2
ENSG00000111142 METAP2 924617 sc-eQTL 8.26e-02 0.141 0.0809 0.665 CD8_Naive L2
ENSG00000111144 LTA4H 354617 sc-eQTL 3.50e-01 0.0686 0.0733 0.665 CD8_Naive L2
ENSG00000111145 ELK3 203762 sc-eQTL 8.75e-01 -0.0122 0.0777 0.665 CD8_Naive L2
ENSG00000136014 USP44 846661 sc-eQTL 4.11e-01 -0.0671 0.0815 0.665 CD8_Naive L2
ENSG00000139343 SNRPF 539209 sc-eQTL 9.80e-01 -0.00177 0.0699 0.665 CD8_Naive L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.28e-02 -0.139 0.0826 0.665 CD8_Naive L2
ENSG00000059758 CDK17 -2343 sc-eQTL 2.32e-01 0.0814 0.0679 0.66 CD8_TCM L2
ENSG00000111142 METAP2 924617 sc-eQTL 8.31e-01 -0.0217 0.102 0.66 CD8_TCM L2
ENSG00000111144 LTA4H 354617 sc-eQTL 5.84e-01 0.0549 0.1 0.66 CD8_TCM L2
ENSG00000111145 ELK3 203762 sc-eQTL 5.87e-01 -0.0462 0.0848 0.66 CD8_TCM L2
ENSG00000136014 USP44 846661 sc-eQTL 3.73e-01 0.0818 0.0917 0.66 CD8_TCM L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.70e-01 0.0161 0.0977 0.66 CD8_TCM L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 1.56e-01 -0.136 0.0952 0.66 CD8_TCM L2
ENSG00000059758 CDK17 -2343 sc-eQTL 1.18e-01 0.129 0.0822 0.676 CD8_TEM L2
ENSG00000111142 METAP2 924617 sc-eQTL 6.82e-01 0.0399 0.0971 0.676 CD8_TEM L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.94e-01 -0.000763 0.101 0.676 CD8_TEM L2
ENSG00000111145 ELK3 203762 sc-eQTL 9.23e-02 -0.167 0.0989 0.676 CD8_TEM L2
ENSG00000136014 USP44 846661 sc-eQTL 4.58e-01 0.063 0.0847 0.676 CD8_TEM L2
ENSG00000139343 SNRPF 539209 sc-eQTL 9.59e-01 0.00478 0.0926 0.676 CD8_TEM L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 2.23e-02 -0.228 0.0992 0.676 CD8_TEM L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.45e-02 -0.117 0.0548 0.667 MAIT L2
ENSG00000074527 NTN4 606985 sc-eQTL 9.03e-01 0.00911 0.0747 0.667 MAIT L2
ENSG00000111142 METAP2 924617 sc-eQTL 1.60e-01 0.132 0.0936 0.667 MAIT L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.15e-01 -0.0092 0.0856 0.667 MAIT L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.82e-01 -0.0295 0.0718 0.667 MAIT L2
ENSG00000139343 SNRPF 539209 sc-eQTL 7.12e-01 -0.0308 0.0833 0.667 MAIT L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 2.95e-01 -0.0979 0.0933 0.667 MAIT L2
ENSG00000188596 CFAP54 -91434 sc-eQTL 8.18e-01 0.0213 0.0927 0.667 MAIT L2
ENSG00000059758 CDK17 -2343 sc-eQTL 1.78e-01 0.077 0.057 0.667 NK_CD56bright L2
ENSG00000111142 METAP2 924617 sc-eQTL 7.09e-01 0.0361 0.0966 0.667 NK_CD56bright L2
ENSG00000111144 LTA4H 354617 sc-eQTL 7.77e-01 -0.024 0.0847 0.667 NK_CD56bright L2
ENSG00000111145 ELK3 203762 sc-eQTL 7.99e-01 0.0229 0.0899 0.667 NK_CD56bright L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.14e-01 -0.0221 0.094 0.667 NK_CD56bright L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.05e-01 -0.0113 0.0949 0.667 NK_CD56bright L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.84e-03 0.141 0.0484 0.666 NK_CD56dim L2
ENSG00000111142 METAP2 924617 sc-eQTL 7.76e-01 -0.0247 0.0865 0.666 NK_CD56dim L2
ENSG00000111144 LTA4H 354617 sc-eQTL 3.90e-01 -0.0767 0.089 0.666 NK_CD56dim L2
ENSG00000111145 ELK3 203762 sc-eQTL 4.17e-01 -0.0641 0.0788 0.666 NK_CD56dim L2
ENSG00000139343 SNRPF 539209 sc-eQTL 1.85e-01 -0.0994 0.0748 0.666 NK_CD56dim L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.67e-02 -0.18 0.0856 0.666 NK_CD56dim L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.63e-01 -0.069 0.0757 0.669 NK_HLA L2
ENSG00000111142 METAP2 924617 sc-eQTL 4.15e-01 0.0779 0.0954 0.669 NK_HLA L2
ENSG00000111144 LTA4H 354617 sc-eQTL 2.89e-01 -0.106 0.0992 0.669 NK_HLA L2
ENSG00000111145 ELK3 203762 sc-eQTL 2.91e-01 0.0974 0.092 0.669 NK_HLA L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.95e-01 -0.0127 0.0962 0.669 NK_HLA L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 4.53e-01 -0.0683 0.0909 0.669 NK_HLA L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.63e-01 0.0491 0.0539 0.666 NK_cytokine L2
ENSG00000111142 METAP2 924617 sc-eQTL 9.81e-01 -0.00211 0.0897 0.666 NK_cytokine L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.98e-01 0.000267 0.0913 0.666 NK_cytokine L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.63e-01 0.0382 0.0874 0.666 NK_cytokine L2
ENSG00000139343 SNRPF 539209 sc-eQTL 6.20e-01 -0.0368 0.074 0.666 NK_cytokine L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 1.58e-01 -0.129 0.0911 0.666 NK_cytokine L2
ENSG00000059758 CDK17 -2343 sc-eQTL 4.48e-01 0.0752 0.0988 0.663 PB L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.08e-01 0.0767 0.116 0.663 PB L2
ENSG00000111144 LTA4H 354617 sc-eQTL 3.65e-01 -0.0792 0.087 0.663 PB L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.98e-01 0.0436 0.112 0.663 PB L2
ENSG00000136014 USP44 846661 sc-eQTL 2.21e-01 -0.127 0.103 0.663 PB L2
ENSG00000139343 SNRPF 539209 sc-eQTL 4.52e-01 -0.0822 0.109 0.663 PB L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 7.32e-01 0.0445 0.13 0.663 PB L2
ENSG00000059758 CDK17 -2343 sc-eQTL 9.40e-01 -0.00459 0.0604 0.663 Pro_T L2
ENSG00000074527 NTN4 606985 sc-eQTL 4.18e-01 0.055 0.0677 0.663 Pro_T L2
ENSG00000111142 METAP2 924617 sc-eQTL 9.41e-01 0.00596 0.0801 0.663 Pro_T L2
ENSG00000111144 LTA4H 354617 sc-eQTL 3.77e-01 -0.0705 0.0796 0.663 Pro_T L2
ENSG00000111145 ELK3 203762 sc-eQTL 1.74e-01 -0.131 0.0961 0.663 Pro_T L2
ENSG00000139343 SNRPF 539209 sc-eQTL 8.24e-01 -0.0136 0.0609 0.663 Pro_T L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.90e-01 -0.00109 0.0884 0.663 Pro_T L2
ENSG00000188596 CFAP54 -91434 sc-eQTL 6.23e-01 -0.0351 0.0715 0.663 Pro_T L2
ENSG00000059758 CDK17 -2343 sc-eQTL 2.34e-01 -0.0795 0.0666 0.665 Treg L2
ENSG00000111142 METAP2 924617 sc-eQTL 9.97e-01 0.000394 0.0909 0.665 Treg L2
ENSG00000111144 LTA4H 354617 sc-eQTL 6.08e-01 -0.0434 0.0846 0.665 Treg L2
ENSG00000111145 ELK3 203762 sc-eQTL 4.39e-01 -0.0594 0.0766 0.665 Treg L2
ENSG00000136014 USP44 846661 sc-eQTL 5.14e-01 0.0563 0.086 0.665 Treg L2
ENSG00000139343 SNRPF 539209 sc-eQTL 2.84e-02 0.194 0.0878 0.665 Treg L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.62e-01 -0.00475 0.0991 0.665 Treg L2
ENSG00000059758 CDK17 -2343 sc-eQTL 8.01e-01 0.0202 0.0801 0.651 cDC L2
ENSG00000084110 HAL 401772 sc-eQTL 9.75e-01 -0.00264 0.0833 0.651 cDC L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.33e-01 0.0628 0.1 0.651 cDC L2
ENSG00000111144 LTA4H 354617 sc-eQTL 1.88e-01 0.0939 0.071 0.651 cDC L2
ENSG00000111145 ELK3 203762 sc-eQTL 5.97e-02 0.177 0.0933 0.651 cDC L2
ENSG00000139343 SNRPF 539209 sc-eQTL 4.43e-01 -0.0606 0.0787 0.651 cDC L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.82e-01 0.0143 0.0961 0.651 cDC L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 9.79e-01 -0.00212 0.081 0.651 cDC L2
ENSG00000059758 CDK17 -2343 sc-eQTL 4.90e-04 -0.245 0.0692 0.665 cMono_IL1B L2
ENSG00000084110 HAL 401772 sc-eQTL 2.36e-01 0.092 0.0774 0.665 cMono_IL1B L2
ENSG00000111142 METAP2 924617 sc-eQTL 1.38e-01 0.119 0.0801 0.665 cMono_IL1B L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.58e-01 0.00442 0.0839 0.665 cMono_IL1B L2
ENSG00000111145 ELK3 203762 sc-eQTL 8.08e-01 -0.0158 0.0646 0.665 cMono_IL1B L2
ENSG00000139343 SNRPF 539209 sc-eQTL 7.38e-01 0.0224 0.0667 0.665 cMono_IL1B L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.23e-01 -0.0206 0.0918 0.665 cMono_IL1B L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 6.15e-02 0.16 0.085 0.665 cMono_IL1B L2
ENSG00000059758 CDK17 -2343 sc-eQTL 1.02e-01 -0.132 0.0803 0.665 cMono_S100A L2
ENSG00000084110 HAL 401772 sc-eQTL 1.38e-01 0.134 0.0902 0.665 cMono_S100A L2
ENSG00000111142 METAP2 924617 sc-eQTL 1.02e-01 0.15 0.0912 0.665 cMono_S100A L2
ENSG00000111144 LTA4H 354617 sc-eQTL 9.53e-01 0.00538 0.0906 0.665 cMono_S100A L2
ENSG00000111145 ELK3 203762 sc-eQTL 3.38e-01 0.0707 0.0736 0.665 cMono_S100A L2
ENSG00000139343 SNRPF 539209 sc-eQTL 3.32e-02 -0.155 0.0722 0.665 cMono_S100A L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.16e-01 -0.0986 0.0982 0.665 cMono_S100A L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 7.29e-01 0.0322 0.0926 0.665 cMono_S100A L2
ENSG00000059758 CDK17 -2343 sc-eQTL 6.49e-01 0.0348 0.0762 0.667 gdT L2
ENSG00000074527 NTN4 606985 sc-eQTL 5.69e-01 -0.0499 0.0875 0.667 gdT L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.63e-01 -0.0635 0.109 0.667 gdT L2
ENSG00000111144 LTA4H 354617 sc-eQTL 4.18e-01 0.0926 0.114 0.667 gdT L2
ENSG00000111145 ELK3 203762 sc-eQTL 6.59e-02 0.194 0.104 0.667 gdT L2
ENSG00000139343 SNRPF 539209 sc-eQTL 2.94e-02 0.221 0.1 0.667 gdT L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 2.88e-01 -0.12 0.112 0.667 gdT L2
ENSG00000188596 CFAP54 -91434 sc-eQTL 5.26e-01 0.0626 0.0985 0.667 gdT L2
ENSG00000059758 CDK17 -2343 sc-eQTL 3.45e-01 0.0857 0.0906 0.66 intMono L2
ENSG00000084110 HAL 401772 sc-eQTL 3.84e-01 0.0799 0.0916 0.66 intMono L2
ENSG00000111142 METAP2 924617 sc-eQTL 9.13e-01 0.0113 0.104 0.66 intMono L2
ENSG00000111144 LTA4H 354617 sc-eQTL 1.25e-01 0.144 0.0936 0.66 intMono L2
ENSG00000111145 ELK3 203762 sc-eQTL 8.87e-01 0.0119 0.0839 0.66 intMono L2
ENSG00000139343 SNRPF 539209 sc-eQTL 1.14e-02 -0.225 0.0882 0.66 intMono L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.77e-01 -0.0145 0.0932 0.66 intMono L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 2.51e-01 0.107 0.0934 0.66 intMono L2
ENSG00000059758 CDK17 -2343 sc-eQTL 5.09e-01 0.0482 0.0729 0.663 ncMono L2
ENSG00000084110 HAL 401772 sc-eQTL 8.22e-01 -0.0184 0.0814 0.663 ncMono L2
ENSG00000111142 METAP2 924617 sc-eQTL 7.23e-01 0.0349 0.0984 0.663 ncMono L2
ENSG00000111144 LTA4H 354617 sc-eQTL 3.58e-01 0.0834 0.0906 0.663 ncMono L2
ENSG00000111145 ELK3 203762 sc-eQTL 8.17e-01 -0.0181 0.0779 0.663 ncMono L2
ENSG00000139343 SNRPF 539209 sc-eQTL 3.96e-02 -0.163 0.0788 0.663 ncMono L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 9.42e-01 -0.00621 0.0846 0.663 ncMono L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 9.26e-01 -0.00893 0.0965 0.663 ncMono L2
ENSG00000059758 CDK17 -2343 sc-eQTL 7.38e-01 -0.0319 0.0951 0.661 pDC L2
ENSG00000084110 HAL 401772 sc-eQTL 8.65e-03 0.209 0.0785 0.661 pDC L2
ENSG00000111142 METAP2 924617 sc-eQTL 5.33e-01 0.0676 0.108 0.661 pDC L2
ENSG00000111144 LTA4H 354617 sc-eQTL 4.39e-01 -0.0696 0.0897 0.661 pDC L2
ENSG00000111145 ELK3 203762 sc-eQTL 4.84e-01 0.0771 0.11 0.661 pDC L2
ENSG00000139343 SNRPF 539209 sc-eQTL 7.00e-01 -0.037 0.0959 0.661 pDC L2
ENSG00000139350 NEDD1 -509086 sc-eQTL 2.01e-01 0.135 0.105 0.661 pDC L2
ENSG00000257715 AC007298.1 372814 sc-eQTL 7.46e-01 0.0295 0.0907 0.661 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -2343 sc-eQTL 9.49e-01 0.00405 0.0627 0.665 B_Memory LOneK1K
ENSG00000111142 METAP2 924617 sc-eQTL 4.26e-01 0.0694 0.087 0.665 B_Memory LOneK1K
ENSG00000111144 LTA4H 354617 sc-eQTL 3.56e-01 0.06 0.0649 0.665 B_Memory LOneK1K
ENSG00000111145 ELK3 203762 sc-eQTL 1.96e-01 -0.096 0.0741 0.665 B_Memory LOneK1K
ENSG00000136014 USP44 846661 sc-eQTL 9.18e-01 -0.00954 0.0927 0.665 B_Memory LOneK1K
ENSG00000139343 SNRPF 539209 sc-eQTL 3.28e-01 0.0704 0.0719 0.665 B_Memory LOneK1K
ENSG00000139350 NEDD1 -509086 sc-eQTL 8.53e-02 -0.162 0.0939 0.665 B_Memory LOneK1K
ENSG00000059758 CDK17 -2343 sc-eQTL 2.58e-01 -0.0613 0.0541 0.665 B_Naive LOneK1K
ENSG00000111142 METAP2 924617 sc-eQTL 8.58e-01 -0.0132 0.0735 0.665 B_Naive LOneK1K
ENSG00000111144 LTA4H 354617 sc-eQTL 5.02e-01 0.041 0.0609 0.665 B_Naive LOneK1K
ENSG00000111145 ELK3 203762 sc-eQTL 2.12e-01 -0.0866 0.0691 0.665 B_Naive LOneK1K
ENSG00000136014 USP44 846661 sc-eQTL 8.36e-01 -0.0176 0.0848 0.665 B_Naive LOneK1K
ENSG00000139343 SNRPF 539209 sc-eQTL 4.08e-01 0.0579 0.0698 0.665 B_Naive LOneK1K
ENSG00000139350 NEDD1 -509086 sc-eQTL 1.20e-01 0.144 0.0919 0.665 B_Naive LOneK1K
ENSG00000059758 CDK17 -2343 sc-eQTL 7.56e-04 -0.218 0.0636 0.665 CD14_Mono LOneK1K
ENSG00000084110 HAL 401772 sc-eQTL 1.97e-01 0.102 0.0789 0.665 CD14_Mono LOneK1K
ENSG00000111142 METAP2 924617 sc-eQTL 8.30e-02 0.129 0.074 0.665 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 354617 sc-eQTL 5.68e-01 0.0497 0.0869 0.665 CD14_Mono LOneK1K
ENSG00000111145 ELK3 203762 sc-eQTL 8.88e-01 0.00888 0.0628 0.665 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 539209 sc-eQTL 3.35e-01 -0.0585 0.0605 0.665 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -509086 sc-eQTL 4.17e-01 -0.0771 0.0949 0.665 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 372814 sc-eQTL 1.33e-01 0.132 0.0876 0.665 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -2343 sc-eQTL 7.70e-01 0.0194 0.0663 0.666 CD16_Mono LOneK1K
ENSG00000084110 HAL 401772 sc-eQTL 6.93e-01 0.031 0.0784 0.666 CD16_Mono LOneK1K
ENSG00000111142 METAP2 924617 sc-eQTL 5.33e-01 0.0556 0.0889 0.666 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 354617 sc-eQTL 4.44e-01 0.0666 0.0868 0.666 CD16_Mono LOneK1K
ENSG00000111145 ELK3 203762 sc-eQTL 3.26e-01 -0.0632 0.0642 0.666 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 539209 sc-eQTL 6.12e-02 -0.124 0.0658 0.666 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -509086 sc-eQTL 4.51e-01 -0.0642 0.085 0.666 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 372814 sc-eQTL 9.30e-01 0.0079 0.0901 0.666 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -2343 sc-eQTL 3.80e-02 0.0953 0.0456 0.666 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 924617 sc-eQTL 8.62e-01 -0.0122 0.0701 0.666 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 354617 sc-eQTL 8.74e-01 -0.0128 0.0802 0.666 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 203762 sc-eQTL 8.97e-01 0.0095 0.0734 0.666 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 539209 sc-eQTL 2.15e-01 -0.0778 0.0625 0.666 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -509086 sc-eQTL 3.46e-02 -0.165 0.0774 0.666 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 203762 eQTL 4.96e-06 -0.0847 0.0184 0.0 0.0 0.324

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina