logo

Genes within 1Mb (chr12:96395831:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -4649 sc-eQTL 8.52e-01 0.00889 0.0477 0.66 B L1
ENSG00000111142 METAP2 922311 sc-eQTL 9.64e-01 -0.00307 0.0675 0.66 B L1
ENSG00000111144 LTA4H 352311 sc-eQTL 7.58e-01 0.0183 0.0593 0.66 B L1
ENSG00000111145 ELK3 201456 sc-eQTL 2.57e-01 -0.0715 0.0629 0.66 B L1
ENSG00000136014 USP44 844355 sc-eQTL 6.57e-01 -0.0346 0.0778 0.66 B L1
ENSG00000139343 SNRPF 536903 sc-eQTL 7.84e-01 0.0157 0.0573 0.66 B L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.38e-01 0.0395 0.0836 0.66 B L1
ENSG00000059758 CDK17 -4649 sc-eQTL 9.80e-01 -0.000976 0.0395 0.66 CD4T L1
ENSG00000111142 METAP2 922311 sc-eQTL 8.33e-01 0.0117 0.0552 0.66 CD4T L1
ENSG00000111144 LTA4H 352311 sc-eQTL 1.18e-02 -0.136 0.0535 0.66 CD4T L1
ENSG00000111145 ELK3 201456 sc-eQTL 4.31e-01 -0.0464 0.0587 0.66 CD4T L1
ENSG00000136014 USP44 844355 sc-eQTL 6.87e-01 -0.0338 0.0839 0.66 CD4T L1
ENSG00000139343 SNRPF 536903 sc-eQTL 8.04e-01 -0.0128 0.0514 0.66 CD4T L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 7.84e-01 -0.0174 0.0633 0.66 CD4T L1
ENSG00000059758 CDK17 -4649 sc-eQTL 8.95e-01 -0.00535 0.0404 0.66 CD8T L1
ENSG00000111142 METAP2 922311 sc-eQTL 7.19e-01 0.0235 0.0653 0.66 CD8T L1
ENSG00000111144 LTA4H 352311 sc-eQTL 4.67e-01 -0.0316 0.0434 0.66 CD8T L1
ENSG00000111145 ELK3 201456 sc-eQTL 6.69e-01 -0.0279 0.0653 0.66 CD8T L1
ENSG00000136014 USP44 844355 sc-eQTL 7.48e-01 -0.0239 0.0743 0.66 CD8T L1
ENSG00000139343 SNRPF 536903 sc-eQTL 4.38e-01 0.0415 0.0535 0.66 CD8T L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.64e-02 -0.148 0.0705 0.66 CD8T L1
ENSG00000059758 CDK17 -4649 sc-eQTL 7.11e-01 -0.0274 0.0738 0.655 DC L1
ENSG00000084110 HAL 399466 sc-eQTL 3.50e-01 0.0787 0.0839 0.655 DC L1
ENSG00000111142 METAP2 922311 sc-eQTL 8.21e-01 0.021 0.0927 0.655 DC L1
ENSG00000111144 LTA4H 352311 sc-eQTL 9.47e-01 0.00454 0.0688 0.655 DC L1
ENSG00000111145 ELK3 201456 sc-eQTL 1.08e-01 0.135 0.0837 0.655 DC L1
ENSG00000139343 SNRPF 536903 sc-eQTL 9.14e-01 -0.00756 0.07 0.655 DC L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 7.46e-01 0.0291 0.0899 0.655 DC L1
ENSG00000257715 AC007298.1 370508 sc-eQTL 3.04e-01 -0.0834 0.081 0.655 DC L1
ENSG00000059758 CDK17 -4649 sc-eQTL 1.39e-02 -0.152 0.0614 0.66 Mono L1
ENSG00000084110 HAL 399466 sc-eQTL 1.17e-01 0.123 0.078 0.66 Mono L1
ENSG00000111142 METAP2 922311 sc-eQTL 2.32e-01 0.081 0.0676 0.66 Mono L1
ENSG00000111144 LTA4H 352311 sc-eQTL 8.94e-01 0.0118 0.0886 0.66 Mono L1
ENSG00000111145 ELK3 201456 sc-eQTL 8.89e-01 0.00834 0.0595 0.66 Mono L1
ENSG00000139343 SNRPF 536903 sc-eQTL 2.07e-01 -0.0707 0.0559 0.66 Mono L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.62e-01 -0.0635 0.086 0.66 Mono L1
ENSG00000257715 AC007298.1 370508 sc-eQTL 4.33e-01 0.0654 0.0834 0.66 Mono L1
ENSG00000059758 CDK17 -4649 sc-eQTL 3.45e-02 0.0938 0.044 0.661 NK L1
ENSG00000111142 METAP2 922311 sc-eQTL 8.44e-01 -0.013 0.0659 0.661 NK L1
ENSG00000111144 LTA4H 352311 sc-eQTL 5.45e-01 -0.0458 0.0755 0.661 NK L1
ENSG00000111145 ELK3 201456 sc-eQTL 4.80e-01 0.0507 0.0716 0.661 NK L1
ENSG00000139343 SNRPF 536903 sc-eQTL 5.52e-01 -0.0353 0.0594 0.661 NK L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.82e-02 -0.155 0.0745 0.661 NK L1
ENSG00000059758 CDK17 -4649 sc-eQTL 1.39e-01 -0.0551 0.0371 0.66 Other_T L1
ENSG00000074527 NTN4 604679 sc-eQTL 8.01e-01 -0.0174 0.0689 0.66 Other_T L1
ENSG00000111142 METAP2 922311 sc-eQTL 5.82e-01 0.0392 0.0711 0.66 Other_T L1
ENSG00000111144 LTA4H 352311 sc-eQTL 4.71e-01 -0.0562 0.0778 0.66 Other_T L1
ENSG00000111145 ELK3 201456 sc-eQTL 8.83e-01 -0.00898 0.0608 0.66 Other_T L1
ENSG00000139343 SNRPF 536903 sc-eQTL 7.75e-01 0.0162 0.0565 0.66 Other_T L1
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.97e-01 -0.0585 0.0859 0.66 Other_T L1
ENSG00000188596 CFAP54 -93740 sc-eQTL 8.59e-01 0.0158 0.0891 0.66 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -4649 sc-eQTL 7.88e-01 0.0229 0.0854 0.661 B_Activated L2
ENSG00000111142 METAP2 922311 sc-eQTL 6.66e-02 0.196 0.106 0.661 B_Activated L2
ENSG00000111144 LTA4H 352311 sc-eQTL 9.62e-01 -0.00459 0.0967 0.661 B_Activated L2
ENSG00000111145 ELK3 201456 sc-eQTL 2.11e-01 0.128 0.102 0.661 B_Activated L2
ENSG00000136014 USP44 844355 sc-eQTL 7.10e-01 -0.0292 0.0786 0.661 B_Activated L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.56e-01 -0.0176 0.0965 0.661 B_Activated L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.28e-01 -0.022 0.101 0.661 B_Activated L2
ENSG00000059758 CDK17 -4649 sc-eQTL 8.58e-01 -0.0131 0.0731 0.659 B_Intermediate L2
ENSG00000111142 METAP2 922311 sc-eQTL 6.86e-01 -0.0339 0.0837 0.659 B_Intermediate L2
ENSG00000111144 LTA4H 352311 sc-eQTL 9.48e-01 0.00458 0.0708 0.659 B_Intermediate L2
ENSG00000111145 ELK3 201456 sc-eQTL 4.48e-01 -0.0605 0.0797 0.659 B_Intermediate L2
ENSG00000136014 USP44 844355 sc-eQTL 3.93e-01 -0.0804 0.0939 0.659 B_Intermediate L2
ENSG00000139343 SNRPF 536903 sc-eQTL 9.05e-01 -0.00952 0.0795 0.659 B_Intermediate L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.44e-01 -0.088 0.0929 0.659 B_Intermediate L2
ENSG00000059758 CDK17 -4649 sc-eQTL 9.07e-01 0.00833 0.0714 0.657 B_Memory L2
ENSG00000111142 METAP2 922311 sc-eQTL 3.12e-01 0.0938 0.0926 0.657 B_Memory L2
ENSG00000111144 LTA4H 352311 sc-eQTL 9.64e-01 -0.00373 0.0824 0.657 B_Memory L2
ENSG00000111145 ELK3 201456 sc-eQTL 6.03e-01 -0.0422 0.081 0.657 B_Memory L2
ENSG00000136014 USP44 844355 sc-eQTL 8.82e-01 0.0132 0.0889 0.657 B_Memory L2
ENSG00000139343 SNRPF 536903 sc-eQTL 2.13e-01 0.107 0.0856 0.657 B_Memory L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.94e-01 -0.123 0.0947 0.657 B_Memory L2
ENSG00000059758 CDK17 -4649 sc-eQTL 3.51e-01 -0.0554 0.0594 0.66 B_Naive1 L2
ENSG00000111142 METAP2 922311 sc-eQTL 7.31e-01 -0.0265 0.0769 0.66 B_Naive1 L2
ENSG00000111144 LTA4H 352311 sc-eQTL 8.68e-01 -0.0104 0.0623 0.66 B_Naive1 L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.09e-01 -0.0487 0.0736 0.66 B_Naive1 L2
ENSG00000136014 USP44 844355 sc-eQTL 4.92e-01 -0.0636 0.0925 0.66 B_Naive1 L2
ENSG00000139343 SNRPF 536903 sc-eQTL 4.02e-01 0.06 0.0715 0.66 B_Naive1 L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.31e-01 0.0196 0.0919 0.66 B_Naive1 L2
ENSG00000059758 CDK17 -4649 sc-eQTL 6.20e-01 0.0367 0.0738 0.659 B_Naive2 L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.20e-01 0.0574 0.0891 0.659 B_Naive2 L2
ENSG00000111144 LTA4H 352311 sc-eQTL 9.89e-01 -0.001 0.07 0.659 B_Naive2 L2
ENSG00000111145 ELK3 201456 sc-eQTL 8.11e-01 -0.0198 0.0825 0.659 B_Naive2 L2
ENSG00000136014 USP44 844355 sc-eQTL 4.81e-01 -0.0629 0.089 0.659 B_Naive2 L2
ENSG00000139343 SNRPF 536903 sc-eQTL 1.40e-01 0.121 0.0815 0.659 B_Naive2 L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.79e-01 0.131 0.097 0.659 B_Naive2 L2
ENSG00000059758 CDK17 -4649 sc-eQTL 6.13e-01 -0.035 0.069 0.655 CD4_CTL L2
ENSG00000111142 METAP2 922311 sc-eQTL 2.56e-01 0.112 0.0985 0.655 CD4_CTL L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.93e-02 -0.2 0.0964 0.655 CD4_CTL L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.30e-01 0.034 0.0986 0.655 CD4_CTL L2
ENSG00000136014 USP44 844355 sc-eQTL 5.20e-01 0.0507 0.0786 0.655 CD4_CTL L2
ENSG00000139343 SNRPF 536903 sc-eQTL 7.76e-01 -0.0244 0.0857 0.655 CD4_CTL L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.59e-01 -0.0909 0.0989 0.655 CD4_CTL L2
ENSG00000059758 CDK17 -4649 sc-eQTL 4.82e-01 0.0308 0.0437 0.66 CD4_Naive L2
ENSG00000111142 METAP2 922311 sc-eQTL 6.46e-01 0.029 0.063 0.66 CD4_Naive L2
ENSG00000111144 LTA4H 352311 sc-eQTL 2.55e-03 -0.189 0.0619 0.66 CD4_Naive L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.08e-01 -0.0237 0.0632 0.66 CD4_Naive L2
ENSG00000136014 USP44 844355 sc-eQTL 7.62e-01 -0.0269 0.0886 0.66 CD4_Naive L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.90e-01 -0.00775 0.0562 0.66 CD4_Naive L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 2.35e-01 -0.0821 0.069 0.66 CD4_Naive L2
ENSG00000059758 CDK17 -4649 sc-eQTL 3.96e-01 -0.0359 0.0422 0.66 CD4_TCM L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.19e-01 -0.0465 0.0719 0.66 CD4_TCM L2
ENSG00000111144 LTA4H 352311 sc-eQTL 7.39e-01 0.0239 0.0717 0.66 CD4_TCM L2
ENSG00000111145 ELK3 201456 sc-eQTL 3.31e-01 -0.0687 0.0704 0.66 CD4_TCM L2
ENSG00000136014 USP44 844355 sc-eQTL 9.25e-01 -0.00921 0.0976 0.66 CD4_TCM L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.73e-01 0.00925 0.0579 0.66 CD4_TCM L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.44e-01 0.0749 0.0789 0.66 CD4_TCM L2
ENSG00000059758 CDK17 -4649 sc-eQTL 2.71e-01 0.0568 0.0514 0.66 CD4_TEM L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.43e-01 0.0524 0.0861 0.66 CD4_TEM L2
ENSG00000111144 LTA4H 352311 sc-eQTL 6.31e-01 -0.0383 0.0796 0.66 CD4_TEM L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.79e-01 -0.0411 0.0739 0.66 CD4_TEM L2
ENSG00000136014 USP44 844355 sc-eQTL 8.84e-01 -0.0133 0.091 0.66 CD4_TEM L2
ENSG00000139343 SNRPF 536903 sc-eQTL 1.48e-01 -0.112 0.0771 0.66 CD4_TEM L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.58e-01 0.0407 0.0918 0.66 CD4_TEM L2
ENSG00000059758 CDK17 -4649 sc-eQTL 4.78e-01 0.0361 0.0508 0.66 CD8_CTL L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.66e-01 -0.0505 0.0878 0.66 CD8_CTL L2
ENSG00000111144 LTA4H 352311 sc-eQTL 7.06e-01 -0.0347 0.0918 0.66 CD8_CTL L2
ENSG00000111145 ELK3 201456 sc-eQTL 1.49e-01 0.12 0.0832 0.66 CD8_CTL L2
ENSG00000136014 USP44 844355 sc-eQTL 9.83e-01 0.00194 0.0932 0.66 CD8_CTL L2
ENSG00000139343 SNRPF 536903 sc-eQTL 6.81e-01 -0.0316 0.0768 0.66 CD8_CTL L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.76e-01 -0.0135 0.0862 0.66 CD8_CTL L2
ENSG00000059758 CDK17 -4649 sc-eQTL 6.86e-01 -0.0244 0.0604 0.66 CD8_Naive L2
ENSG00000111142 METAP2 922311 sc-eQTL 1.71e-01 0.11 0.0799 0.66 CD8_Naive L2
ENSG00000111144 LTA4H 352311 sc-eQTL 4.71e-01 0.0521 0.0722 0.66 CD8_Naive L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.77e-01 0.0217 0.0765 0.66 CD8_Naive L2
ENSG00000136014 USP44 844355 sc-eQTL 5.30e-01 -0.0504 0.0803 0.66 CD8_Naive L2
ENSG00000139343 SNRPF 536903 sc-eQTL 9.38e-01 -0.00538 0.0688 0.66 CD8_Naive L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.20e-02 -0.152 0.0812 0.66 CD8_Naive L2
ENSG00000059758 CDK17 -4649 sc-eQTL 4.20e-01 0.0544 0.0674 0.655 CD8_TCM L2
ENSG00000111142 METAP2 922311 sc-eQTL 7.90e-01 -0.0268 0.101 0.655 CD8_TCM L2
ENSG00000111144 LTA4H 352311 sc-eQTL 8.18e-01 0.0229 0.0992 0.655 CD8_TCM L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.57e-01 -0.0494 0.0839 0.655 CD8_TCM L2
ENSG00000136014 USP44 844355 sc-eQTL 5.22e-01 0.0583 0.0909 0.655 CD8_TCM L2
ENSG00000139343 SNRPF 536903 sc-eQTL 7.90e-01 0.0258 0.0967 0.655 CD8_TCM L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.45e-01 -0.138 0.0942 0.655 CD8_TCM L2
ENSG00000059758 CDK17 -4649 sc-eQTL 1.84e-01 0.108 0.0811 0.671 CD8_TEM L2
ENSG00000111142 METAP2 922311 sc-eQTL 6.58e-01 0.0424 0.0956 0.671 CD8_TEM L2
ENSG00000111144 LTA4H 352311 sc-eQTL 6.27e-01 -0.0485 0.0997 0.671 CD8_TEM L2
ENSG00000111145 ELK3 201456 sc-eQTL 1.15e-01 -0.154 0.0975 0.671 CD8_TEM L2
ENSG00000136014 USP44 844355 sc-eQTL 4.16e-01 0.0679 0.0834 0.671 CD8_TEM L2
ENSG00000139343 SNRPF 536903 sc-eQTL 9.22e-01 0.00892 0.0912 0.671 CD8_TEM L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 2.78e-02 -0.217 0.0977 0.671 CD8_TEM L2
ENSG00000059758 CDK17 -4649 sc-eQTL 2.18e-02 -0.124 0.0538 0.662 MAIT L2
ENSG00000074527 NTN4 604679 sc-eQTL 9.84e-01 -0.00144 0.0734 0.662 MAIT L2
ENSG00000111142 METAP2 922311 sc-eQTL 2.94e-01 0.097 0.0922 0.662 MAIT L2
ENSG00000111144 LTA4H 352311 sc-eQTL 7.82e-01 -0.0233 0.0841 0.662 MAIT L2
ENSG00000111145 ELK3 201456 sc-eQTL 6.00e-01 -0.0371 0.0706 0.662 MAIT L2
ENSG00000139343 SNRPF 536903 sc-eQTL 7.88e-01 -0.022 0.0818 0.662 MAIT L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 2.30e-01 -0.11 0.0916 0.662 MAIT L2
ENSG00000188596 CFAP54 -93740 sc-eQTL 7.28e-01 0.0317 0.0911 0.662 MAIT L2
ENSG00000059758 CDK17 -4649 sc-eQTL 2.67e-01 0.0625 0.0562 0.662 NK_CD56bright L2
ENSG00000111142 METAP2 922311 sc-eQTL 4.76e-01 0.0679 0.095 0.662 NK_CD56bright L2
ENSG00000111144 LTA4H 352311 sc-eQTL 7.25e-01 -0.0293 0.0834 0.662 NK_CD56bright L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.69e-01 0.0505 0.0884 0.662 NK_CD56bright L2
ENSG00000139343 SNRPF 536903 sc-eQTL 7.93e-01 -0.0243 0.0925 0.662 NK_CD56bright L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 7.87e-01 -0.0253 0.0934 0.662 NK_CD56bright L2
ENSG00000059758 CDK17 -4649 sc-eQTL 1.22e-02 0.121 0.0479 0.662 NK_CD56dim L2
ENSG00000111142 METAP2 922311 sc-eQTL 9.58e-01 0.00447 0.0853 0.662 NK_CD56dim L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.77e-01 -0.0777 0.0877 0.662 NK_CD56dim L2
ENSG00000111145 ELK3 201456 sc-eQTL 4.81e-01 -0.0549 0.0777 0.662 NK_CD56dim L2
ENSG00000139343 SNRPF 536903 sc-eQTL 2.67e-01 -0.0822 0.0738 0.662 NK_CD56dim L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.53e-02 -0.17 0.0845 0.662 NK_CD56dim L2
ENSG00000059758 CDK17 -4649 sc-eQTL 2.04e-01 -0.0948 0.0745 0.664 NK_HLA L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.00e-01 0.0635 0.0941 0.664 NK_HLA L2
ENSG00000111144 LTA4H 352311 sc-eQTL 1.53e-01 -0.14 0.0975 0.664 NK_HLA L2
ENSG00000111145 ELK3 201456 sc-eQTL 3.57e-01 0.0838 0.0907 0.664 NK_HLA L2
ENSG00000139343 SNRPF 536903 sc-eQTL 9.60e-01 0.00479 0.0948 0.664 NK_HLA L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.27e-01 -0.0437 0.0896 0.664 NK_HLA L2
ENSG00000059758 CDK17 -4649 sc-eQTL 4.26e-01 0.0424 0.0532 0.662 NK_cytokine L2
ENSG00000111142 METAP2 922311 sc-eQTL 9.04e-01 -0.0107 0.0884 0.662 NK_cytokine L2
ENSG00000111144 LTA4H 352311 sc-eQTL 9.20e-01 -0.00907 0.09 0.662 NK_cytokine L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.99e-01 0.0453 0.0861 0.662 NK_cytokine L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.36e-01 -0.0151 0.073 0.662 NK_cytokine L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.19e-01 -0.141 0.0897 0.662 NK_cytokine L2
ENSG00000059758 CDK17 -4649 sc-eQTL 3.40e-01 0.0926 0.0965 0.659 PB L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.64e-01 0.0655 0.113 0.659 PB L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.56e-01 -0.079 0.0852 0.659 PB L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.36e-01 0.0679 0.109 0.659 PB L2
ENSG00000136014 USP44 844355 sc-eQTL 1.23e-01 -0.156 0.1 0.659 PB L2
ENSG00000139343 SNRPF 536903 sc-eQTL 4.87e-01 -0.0744 0.107 0.659 PB L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.05e-01 0.0658 0.127 0.659 PB L2
ENSG00000059758 CDK17 -4649 sc-eQTL 7.59e-01 -0.0183 0.0595 0.659 Pro_T L2
ENSG00000074527 NTN4 604679 sc-eQTL 5.65e-01 0.0385 0.0668 0.659 Pro_T L2
ENSG00000111142 METAP2 922311 sc-eQTL 8.07e-01 0.0193 0.0789 0.659 Pro_T L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.11e-01 -0.0797 0.0784 0.659 Pro_T L2
ENSG00000111145 ELK3 201456 sc-eQTL 2.16e-01 -0.118 0.0947 0.659 Pro_T L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.47e-01 0.0116 0.0599 0.659 Pro_T L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.47e-01 -0.0168 0.087 0.659 Pro_T L2
ENSG00000188596 CFAP54 -93740 sc-eQTL 9.15e-01 -0.00755 0.0704 0.659 Pro_T L2
ENSG00000059758 CDK17 -4649 sc-eQTL 1.89e-01 -0.0864 0.0655 0.66 Treg L2
ENSG00000111142 METAP2 922311 sc-eQTL 9.49e-01 0.00572 0.0895 0.66 Treg L2
ENSG00000111144 LTA4H 352311 sc-eQTL 5.05e-01 -0.0556 0.0832 0.66 Treg L2
ENSG00000111145 ELK3 201456 sc-eQTL 4.95e-01 -0.0516 0.0754 0.66 Treg L2
ENSG00000136014 USP44 844355 sc-eQTL 4.77e-01 0.0603 0.0847 0.66 Treg L2
ENSG00000139343 SNRPF 536903 sc-eQTL 3.07e-02 0.188 0.0865 0.66 Treg L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 7.48e-01 -0.0313 0.0975 0.66 Treg L2
ENSG00000059758 CDK17 -4649 sc-eQTL 8.42e-01 -0.0158 0.079 0.646 cDC L2
ENSG00000084110 HAL 399466 sc-eQTL 8.09e-01 0.0198 0.0821 0.646 cDC L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.91e-01 0.0533 0.099 0.646 cDC L2
ENSG00000111144 LTA4H 352311 sc-eQTL 2.00e-01 0.0901 0.07 0.646 cDC L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.76e-02 0.163 0.0921 0.646 cDC L2
ENSG00000139343 SNRPF 536903 sc-eQTL 2.97e-01 -0.0811 0.0775 0.646 cDC L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 6.36e-01 -0.0449 0.0947 0.646 cDC L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 7.62e-01 -0.0242 0.0799 0.646 cDC L2
ENSG00000059758 CDK17 -4649 sc-eQTL 2.27e-04 -0.254 0.0677 0.66 cMono_IL1B L2
ENSG00000084110 HAL 399466 sc-eQTL 3.24e-01 0.0752 0.0761 0.66 cMono_IL1B L2
ENSG00000111142 METAP2 922311 sc-eQTL 1.36e-01 0.118 0.0787 0.66 cMono_IL1B L2
ENSG00000111144 LTA4H 352311 sc-eQTL 8.93e-01 -0.0111 0.0824 0.66 cMono_IL1B L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.43e-01 -0.0208 0.0635 0.66 cMono_IL1B L2
ENSG00000139343 SNRPF 536903 sc-eQTL 6.16e-01 0.0329 0.0655 0.66 cMono_IL1B L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.13e-01 -0.0214 0.0902 0.66 cMono_IL1B L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 1.02e-01 0.137 0.0837 0.66 cMono_IL1B L2
ENSG00000059758 CDK17 -4649 sc-eQTL 6.03e-02 -0.148 0.0786 0.66 cMono_S100A L2
ENSG00000084110 HAL 399466 sc-eQTL 1.48e-01 0.128 0.0885 0.66 cMono_S100A L2
ENSG00000111142 METAP2 922311 sc-eQTL 1.54e-01 0.128 0.0896 0.66 cMono_S100A L2
ENSG00000111144 LTA4H 352311 sc-eQTL 8.30e-01 -0.0192 0.0889 0.66 cMono_S100A L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.25e-01 0.046 0.0723 0.66 cMono_S100A L2
ENSG00000139343 SNRPF 536903 sc-eQTL 9.68e-02 -0.119 0.0711 0.66 cMono_S100A L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.04e-01 -0.0806 0.0964 0.66 cMono_S100A L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 9.07e-01 0.0107 0.0909 0.66 cMono_S100A L2
ENSG00000059758 CDK17 -4649 sc-eQTL 7.90e-01 0.0201 0.0754 0.664 gdT L2
ENSG00000074527 NTN4 604679 sc-eQTL 4.57e-01 -0.0644 0.0864 0.664 gdT L2
ENSG00000111142 METAP2 922311 sc-eQTL 7.25e-01 -0.0382 0.108 0.664 gdT L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.31e-01 0.11 0.112 0.664 gdT L2
ENSG00000111145 ELK3 201456 sc-eQTL 1.68e-01 0.144 0.104 0.664 gdT L2
ENSG00000139343 SNRPF 536903 sc-eQTL 2.14e-02 0.23 0.0989 0.664 gdT L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 3.19e-01 -0.111 0.111 0.664 gdT L2
ENSG00000188596 CFAP54 -93740 sc-eQTL 4.05e-01 0.0812 0.0973 0.664 gdT L2
ENSG00000059758 CDK17 -4649 sc-eQTL 7.08e-01 0.0334 0.0891 0.656 intMono L2
ENSG00000084110 HAL 399466 sc-eQTL 3.11e-01 0.0912 0.0899 0.656 intMono L2
ENSG00000111142 METAP2 922311 sc-eQTL 9.26e-01 0.00955 0.102 0.656 intMono L2
ENSG00000111144 LTA4H 352311 sc-eQTL 2.24e-01 0.112 0.0921 0.656 intMono L2
ENSG00000111145 ELK3 201456 sc-eQTL 7.90e-01 0.022 0.0823 0.656 intMono L2
ENSG00000139343 SNRPF 536903 sc-eQTL 1.59e-02 -0.211 0.0867 0.656 intMono L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 8.75e-01 -0.0144 0.0914 0.656 intMono L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 2.46e-01 0.107 0.0916 0.656 intMono L2
ENSG00000059758 CDK17 -4649 sc-eQTL 5.80e-01 0.0397 0.0716 0.658 ncMono L2
ENSG00000084110 HAL 399466 sc-eQTL 7.31e-01 -0.0275 0.0799 0.658 ncMono L2
ENSG00000111142 METAP2 922311 sc-eQTL 5.60e-01 0.0564 0.0966 0.658 ncMono L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.74e-01 0.0793 0.0889 0.658 ncMono L2
ENSG00000111145 ELK3 201456 sc-eQTL 5.97e-01 -0.0405 0.0765 0.658 ncMono L2
ENSG00000139343 SNRPF 536903 sc-eQTL 4.98e-02 -0.153 0.0774 0.658 ncMono L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 9.77e-01 0.00243 0.083 0.658 ncMono L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 9.45e-01 0.00654 0.0947 0.658 ncMono L2
ENSG00000059758 CDK17 -4649 sc-eQTL 8.82e-01 -0.0139 0.0935 0.655 pDC L2
ENSG00000084110 HAL 399466 sc-eQTL 1.86e-02 0.184 0.0776 0.655 pDC L2
ENSG00000111142 METAP2 922311 sc-eQTL 4.49e-01 0.0808 0.106 0.655 pDC L2
ENSG00000111144 LTA4H 352311 sc-eQTL 3.76e-01 -0.0782 0.0882 0.655 pDC L2
ENSG00000111145 ELK3 201456 sc-eQTL 6.93e-01 0.0427 0.108 0.655 pDC L2
ENSG00000139343 SNRPF 536903 sc-eQTL 8.91e-01 0.013 0.0943 0.655 pDC L2
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.03e-01 0.169 0.103 0.655 pDC L2
ENSG00000257715 AC007298.1 370508 sc-eQTL 5.03e-01 0.0599 0.0891 0.655 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -4649 sc-eQTL 8.42e-01 0.0123 0.0616 0.66 B_Memory LOneK1K
ENSG00000111142 METAP2 922311 sc-eQTL 4.28e-01 0.068 0.0856 0.66 B_Memory LOneK1K
ENSG00000111144 LTA4H 352311 sc-eQTL 7.10e-01 0.0239 0.064 0.66 B_Memory LOneK1K
ENSG00000111145 ELK3 201456 sc-eQTL 3.31e-01 -0.0711 0.073 0.66 B_Memory LOneK1K
ENSG00000136014 USP44 844355 sc-eQTL 8.55e-01 -0.0167 0.0912 0.66 B_Memory LOneK1K
ENSG00000139343 SNRPF 536903 sc-eQTL 3.24e-01 0.07 0.0707 0.66 B_Memory LOneK1K
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.35e-01 -0.139 0.0925 0.66 B_Memory LOneK1K
ENSG00000059758 CDK17 -4649 sc-eQTL 2.82e-01 -0.0575 0.0533 0.66 B_Naive LOneK1K
ENSG00000111142 METAP2 922311 sc-eQTL 9.06e-01 -0.00852 0.0723 0.66 B_Naive LOneK1K
ENSG00000111144 LTA4H 352311 sc-eQTL 6.54e-01 0.0269 0.06 0.66 B_Naive LOneK1K
ENSG00000111145 ELK3 201456 sc-eQTL 1.66e-01 -0.0946 0.068 0.66 B_Naive LOneK1K
ENSG00000136014 USP44 844355 sc-eQTL 8.52e-01 -0.0156 0.0835 0.66 B_Naive LOneK1K
ENSG00000139343 SNRPF 536903 sc-eQTL 3.97e-01 0.0583 0.0687 0.66 B_Naive LOneK1K
ENSG00000139350 NEDD1 -511392 sc-eQTL 1.85e-01 0.12 0.0907 0.66 B_Naive LOneK1K
ENSG00000059758 CDK17 -4649 sc-eQTL 3.12e-04 -0.228 0.0623 0.66 CD14_Mono LOneK1K
ENSG00000084110 HAL 399466 sc-eQTL 2.80e-01 0.0841 0.0776 0.66 CD14_Mono LOneK1K
ENSG00000111142 METAP2 922311 sc-eQTL 1.01e-01 0.12 0.0728 0.66 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 352311 sc-eQTL 7.43e-01 0.028 0.0854 0.66 CD14_Mono LOneK1K
ENSG00000111145 ELK3 201456 sc-eQTL 9.80e-01 -0.00156 0.0617 0.66 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 536903 sc-eQTL 5.45e-01 -0.036 0.0595 0.66 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.99e-01 -0.0631 0.0933 0.66 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 370508 sc-eQTL 2.31e-01 0.104 0.0862 0.66 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -4649 sc-eQTL 9.51e-01 0.00399 0.065 0.662 CD16_Mono LOneK1K
ENSG00000084110 HAL 399466 sc-eQTL 7.45e-01 0.025 0.0768 0.662 CD16_Mono LOneK1K
ENSG00000111142 METAP2 922311 sc-eQTL 4.26e-01 0.0694 0.087 0.662 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 352311 sc-eQTL 5.12e-01 0.0558 0.0851 0.662 CD16_Mono LOneK1K
ENSG00000111145 ELK3 201456 sc-eQTL 3.52e-01 -0.0587 0.0629 0.662 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 536903 sc-eQTL 8.44e-02 -0.112 0.0645 0.662 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -511392 sc-eQTL 5.30e-01 -0.0524 0.0832 0.662 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 370508 sc-eQTL 9.26e-01 0.00824 0.0882 0.662 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -4649 sc-eQTL 8.86e-02 0.0773 0.0452 0.662 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 922311 sc-eQTL 9.61e-01 -0.00341 0.0692 0.662 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 352311 sc-eQTL 7.16e-01 -0.0288 0.0791 0.662 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 201456 sc-eQTL 8.57e-01 0.013 0.0724 0.662 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 536903 sc-eQTL 3.52e-01 -0.0576 0.0618 0.662 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -511392 sc-eQTL 4.07e-02 -0.158 0.0765 0.662 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 201456 eQTL 9.7e-07 -0.0877 0.0178 0.0 0.0 0.335

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 201456 1.26e-06 9.44e-07 3.26e-07 6.38e-07 1.14e-07 4.35e-07 1.1e-06 3.24e-07 1.11e-06 3.99e-07 1.32e-06 6.19e-07 1.46e-06 2.9e-07 4.16e-07 8.35e-07 5.64e-07 6.1e-07 3.79e-07 6.2e-07 2.29e-07 6.27e-07 7.52e-07 4.09e-07 1.96e-06 3.02e-07 9.13e-07 4.7e-07 8.81e-07 9.49e-07 4.54e-07 4.91e-08 9.46e-08 3.49e-07 4e-07 3.95e-07 2.9e-07 1.41e-07 1.5e-07 2.5e-07 1.01e-07 1.43e-06 1.66e-07 1.29e-08 1.54e-07 9.85e-08 1.73e-07 4.85e-08 1.63e-07
ENSG00000188596 \N -93744 4.62e-06 3.93e-06 5.62e-07 2.02e-06 4.76e-07 1.27e-06 2.48e-06 9.87e-07 2.68e-06 1.73e-06 3.76e-06 2.89e-06 4.27e-06 1.49e-06 9.25e-07 2.34e-06 1.1e-06 2.89e-06 6.59e-07 1.1e-06 9.06e-07 3.03e-06 3.17e-06 1.03e-06 4.77e-06 1.28e-06 2.35e-06 1.74e-06 2.55e-06 2.53e-06 2.06e-06 3.45e-07 4.32e-07 1.24e-06 1.8e-06 9.73e-07 8.07e-07 4.38e-07 1.11e-06 3.82e-07 3.03e-07 3.99e-06 4.2e-07 1.75e-07 2.91e-07 2.95e-07 7.75e-07 2.49e-07 1.57e-07