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Genes within 1Mb (chr12:96378280:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -22200 sc-eQTL 8.06e-01 -0.0114 0.0463 0.605 B L1
ENSG00000111142 METAP2 904760 sc-eQTL 4.89e-01 0.0453 0.0654 0.605 B L1
ENSG00000111144 LTA4H 334760 sc-eQTL 7.90e-01 0.0153 0.0575 0.605 B L1
ENSG00000111145 ELK3 183905 sc-eQTL 3.16e-01 -0.0613 0.0611 0.605 B L1
ENSG00000136014 USP44 826804 sc-eQTL 5.85e-01 -0.0412 0.0754 0.605 B L1
ENSG00000139343 SNRPF 519352 sc-eQTL 6.12e-01 0.0282 0.0556 0.605 B L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.11e-01 0.0195 0.0811 0.605 B L1
ENSG00000059758 CDK17 -22200 sc-eQTL 9.68e-01 -0.00154 0.0381 0.605 CD4T L1
ENSG00000111142 METAP2 904760 sc-eQTL 4.89e-01 0.0368 0.0531 0.605 CD4T L1
ENSG00000111144 LTA4H 334760 sc-eQTL 1.47e-02 -0.127 0.0516 0.605 CD4T L1
ENSG00000111145 ELK3 183905 sc-eQTL 3.80e-01 -0.0497 0.0565 0.605 CD4T L1
ENSG00000136014 USP44 826804 sc-eQTL 9.57e-01 0.00436 0.0808 0.605 CD4T L1
ENSG00000139343 SNRPF 519352 sc-eQTL 9.32e-01 0.00424 0.0495 0.605 CD4T L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.71e-01 -0.00989 0.061 0.605 CD4T L1
ENSG00000059758 CDK17 -22200 sc-eQTL 4.24e-01 0.031 0.0387 0.605 CD8T L1
ENSG00000111142 METAP2 904760 sc-eQTL 2.63e-01 0.07 0.0624 0.605 CD8T L1
ENSG00000111144 LTA4H 334760 sc-eQTL 4.99e-01 -0.0282 0.0416 0.605 CD8T L1
ENSG00000111145 ELK3 183905 sc-eQTL 6.17e-01 0.0314 0.0626 0.605 CD8T L1
ENSG00000136014 USP44 826804 sc-eQTL 7.73e-01 -0.0206 0.0712 0.605 CD8T L1
ENSG00000139343 SNRPF 519352 sc-eQTL 7.28e-02 0.0918 0.0509 0.605 CD8T L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 3.38e-02 -0.144 0.0675 0.605 CD8T L1
ENSG00000059758 CDK17 -22200 sc-eQTL 4.87e-01 0.0499 0.0716 0.597 DC L1
ENSG00000084110 HAL 381915 sc-eQTL 3.26e-01 0.0802 0.0814 0.597 DC L1
ENSG00000111142 METAP2 904760 sc-eQTL 5.73e-01 0.0507 0.0899 0.597 DC L1
ENSG00000111144 LTA4H 334760 sc-eQTL 6.23e-01 -0.0329 0.0667 0.597 DC L1
ENSG00000111145 ELK3 183905 sc-eQTL 4.44e-01 0.0627 0.0816 0.597 DC L1
ENSG00000139343 SNRPF 519352 sc-eQTL 5.42e-01 0.0415 0.0679 0.597 DC L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.58e-01 -0.0156 0.0873 0.597 DC L1
ENSG00000257715 AC007298.1 352957 sc-eQTL 2.20e-01 -0.0966 0.0785 0.597 DC L1
ENSG00000059758 CDK17 -22200 sc-eQTL 3.80e-02 -0.122 0.0586 0.605 Mono L1
ENSG00000084110 HAL 381915 sc-eQTL 6.41e-02 0.138 0.074 0.605 Mono L1
ENSG00000111142 METAP2 904760 sc-eQTL 2.43e-01 0.0752 0.0642 0.605 Mono L1
ENSG00000111144 LTA4H 334760 sc-eQTL 9.17e-01 0.00879 0.0842 0.605 Mono L1
ENSG00000111145 ELK3 183905 sc-eQTL 8.64e-01 -0.00972 0.0566 0.605 Mono L1
ENSG00000139343 SNRPF 519352 sc-eQTL 2.72e-01 -0.0586 0.0532 0.605 Mono L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 3.60e-01 -0.075 0.0817 0.605 Mono L1
ENSG00000257715 AC007298.1 352957 sc-eQTL 7.38e-01 0.0265 0.0793 0.605 Mono L1
ENSG00000059758 CDK17 -22200 sc-eQTL 1.66e-02 0.102 0.0422 0.605 NK L1
ENSG00000111142 METAP2 904760 sc-eQTL 7.00e-01 0.0245 0.0634 0.605 NK L1
ENSG00000111144 LTA4H 334760 sc-eQTL 2.69e-01 -0.0804 0.0725 0.605 NK L1
ENSG00000111145 ELK3 183905 sc-eQTL 1.82e-01 0.0919 0.0687 0.605 NK L1
ENSG00000139343 SNRPF 519352 sc-eQTL 4.24e-01 0.0458 0.0571 0.605 NK L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.30e-01 -0.109 0.072 0.605 NK L1
ENSG00000059758 CDK17 -22200 sc-eQTL 1.56e-01 -0.0508 0.0357 0.605 Other_T L1
ENSG00000074527 NTN4 587128 sc-eQTL 7.24e-01 0.0234 0.0664 0.605 Other_T L1
ENSG00000111142 METAP2 904760 sc-eQTL 2.02e-01 0.0874 0.0683 0.605 Other_T L1
ENSG00000111144 LTA4H 334760 sc-eQTL 7.82e-01 -0.0208 0.075 0.605 Other_T L1
ENSG00000111145 ELK3 183905 sc-eQTL 6.32e-01 0.0281 0.0585 0.605 Other_T L1
ENSG00000139343 SNRPF 519352 sc-eQTL 2.90e-01 0.0576 0.0543 0.605 Other_T L1
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.28e-01 -0.126 0.0824 0.605 Other_T L1
ENSG00000188596 CFAP54 -111291 sc-eQTL 9.24e-01 -0.0082 0.0858 0.605 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -22200 sc-eQTL 7.73e-01 0.0234 0.0809 0.597 B_Activated L2
ENSG00000111142 METAP2 904760 sc-eQTL 2.51e-01 0.117 0.101 0.597 B_Activated L2
ENSG00000111144 LTA4H 334760 sc-eQTL 4.17e-01 0.0744 0.0914 0.597 B_Activated L2
ENSG00000111145 ELK3 183905 sc-eQTL 1.68e-01 0.134 0.0965 0.597 B_Activated L2
ENSG00000136014 USP44 826804 sc-eQTL 7.10e-01 -0.0278 0.0744 0.597 B_Activated L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.49e-01 -0.0417 0.0914 0.597 B_Activated L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 5.40e-01 -0.0587 0.0956 0.597 B_Activated L2
ENSG00000059758 CDK17 -22200 sc-eQTL 5.60e-01 -0.0412 0.0706 0.603 B_Intermediate L2
ENSG00000111142 METAP2 904760 sc-eQTL 7.57e-01 0.0251 0.081 0.603 B_Intermediate L2
ENSG00000111144 LTA4H 334760 sc-eQTL 9.68e-01 0.00274 0.0684 0.603 B_Intermediate L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.81e-02 -0.127 0.0766 0.603 B_Intermediate L2
ENSG00000136014 USP44 826804 sc-eQTL 1.79e-01 -0.122 0.0905 0.603 B_Intermediate L2
ENSG00000139343 SNRPF 519352 sc-eQTL 8.21e-01 0.0174 0.0768 0.603 B_Intermediate L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 9.42e-01 0.0066 0.09 0.603 B_Intermediate L2
ENSG00000059758 CDK17 -22200 sc-eQTL 9.92e-01 0.000724 0.0684 0.601 B_Memory L2
ENSG00000111142 METAP2 904760 sc-eQTL 1.57e-01 0.126 0.0884 0.601 B_Memory L2
ENSG00000111144 LTA4H 334760 sc-eQTL 9.88e-01 -0.00115 0.0789 0.601 B_Memory L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.63e-01 0.00364 0.0776 0.601 B_Memory L2
ENSG00000136014 USP44 826804 sc-eQTL 7.66e-01 -0.0254 0.0851 0.601 B_Memory L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.76e-02 0.15 0.0815 0.601 B_Memory L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 2.52e-01 -0.104 0.0907 0.601 B_Memory L2
ENSG00000059758 CDK17 -22200 sc-eQTL 2.13e-01 -0.0716 0.0573 0.605 B_Naive1 L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.78e-01 0.0309 0.0744 0.605 B_Naive1 L2
ENSG00000111144 LTA4H 334760 sc-eQTL 8.01e-01 -0.0152 0.0602 0.605 B_Naive1 L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.78e-01 0.00193 0.0712 0.605 B_Naive1 L2
ENSG00000136014 USP44 826804 sc-eQTL 9.91e-01 0.00101 0.0895 0.605 B_Naive1 L2
ENSG00000139343 SNRPF 519352 sc-eQTL 5.99e-01 0.0364 0.0692 0.605 B_Naive1 L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.97e-01 -0.0116 0.0888 0.605 B_Naive1 L2
ENSG00000059758 CDK17 -22200 sc-eQTL 9.93e-01 -0.000584 0.0715 0.603 B_Naive2 L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.95e-01 0.0338 0.0863 0.603 B_Naive2 L2
ENSG00000111144 LTA4H 334760 sc-eQTL 8.95e-01 -0.00897 0.0678 0.603 B_Naive2 L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.16e-01 -0.00839 0.0799 0.603 B_Naive2 L2
ENSG00000136014 USP44 826804 sc-eQTL 2.24e-01 -0.105 0.086 0.603 B_Naive2 L2
ENSG00000139343 SNRPF 519352 sc-eQTL 8.44e-02 0.137 0.0788 0.603 B_Naive2 L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 9.17e-01 0.00988 0.0943 0.603 B_Naive2 L2
ENSG00000059758 CDK17 -22200 sc-eQTL 5.37e-01 -0.0407 0.0659 0.6 CD4_CTL L2
ENSG00000111142 METAP2 904760 sc-eQTL 7.22e-01 0.0337 0.0944 0.6 CD4_CTL L2
ENSG00000111144 LTA4H 334760 sc-eQTL 4.26e-02 -0.188 0.092 0.6 CD4_CTL L2
ENSG00000111145 ELK3 183905 sc-eQTL 3.91e-01 0.0808 0.094 0.6 CD4_CTL L2
ENSG00000136014 USP44 826804 sc-eQTL 3.50e-01 0.0703 0.075 0.6 CD4_CTL L2
ENSG00000139343 SNRPF 519352 sc-eQTL 9.44e-01 0.0058 0.0819 0.6 CD4_CTL L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.98e-01 -0.122 0.0942 0.6 CD4_CTL L2
ENSG00000059758 CDK17 -22200 sc-eQTL 4.75e-01 0.03 0.042 0.605 CD4_Naive L2
ENSG00000111142 METAP2 904760 sc-eQTL 3.07e-01 0.062 0.0605 0.605 CD4_Naive L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.63e-03 -0.181 0.0595 0.605 CD4_Naive L2
ENSG00000111145 ELK3 183905 sc-eQTL 7.46e-01 -0.0197 0.0608 0.605 CD4_Naive L2
ENSG00000136014 USP44 826804 sc-eQTL 9.86e-01 -0.0015 0.0852 0.605 CD4_Naive L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.72e-01 0.0229 0.054 0.605 CD4_Naive L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 2.52e-01 -0.0762 0.0663 0.605 CD4_Naive L2
ENSG00000059758 CDK17 -22200 sc-eQTL 5.57e-01 -0.0239 0.0405 0.605 CD4_TCM L2
ENSG00000111142 METAP2 904760 sc-eQTL 7.39e-01 -0.0231 0.0691 0.605 CD4_TCM L2
ENSG00000111144 LTA4H 334760 sc-eQTL 9.09e-01 -0.00785 0.0688 0.605 CD4_TCM L2
ENSG00000111145 ELK3 183905 sc-eQTL 1.46e-01 -0.0984 0.0674 0.605 CD4_TCM L2
ENSG00000136014 USP44 826804 sc-eQTL 6.44e-01 0.0433 0.0936 0.605 CD4_TCM L2
ENSG00000139343 SNRPF 519352 sc-eQTL 9.36e-01 0.00446 0.0555 0.605 CD4_TCM L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 5.31e-01 0.0476 0.0758 0.605 CD4_TCM L2
ENSG00000059758 CDK17 -22200 sc-eQTL 5.38e-01 0.0304 0.0494 0.605 CD4_TEM L2
ENSG00000111142 METAP2 904760 sc-eQTL 4.77e-01 0.0588 0.0825 0.605 CD4_TEM L2
ENSG00000111144 LTA4H 334760 sc-eQTL 7.58e-01 -0.0235 0.0763 0.605 CD4_TEM L2
ENSG00000111145 ELK3 183905 sc-eQTL 7.27e-01 -0.0248 0.0709 0.605 CD4_TEM L2
ENSG00000136014 USP44 826804 sc-eQTL 9.26e-01 -0.00806 0.0872 0.605 CD4_TEM L2
ENSG00000139343 SNRPF 519352 sc-eQTL 1.55e-01 -0.105 0.0739 0.605 CD4_TEM L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 5.18e-01 0.057 0.0879 0.605 CD4_TEM L2
ENSG00000059758 CDK17 -22200 sc-eQTL 1.59e-01 0.0682 0.0482 0.605 CD8_CTL L2
ENSG00000111142 METAP2 904760 sc-eQTL 8.59e-01 0.0149 0.0838 0.605 CD8_CTL L2
ENSG00000111144 LTA4H 334760 sc-eQTL 7.46e-01 -0.0284 0.0875 0.605 CD8_CTL L2
ENSG00000111145 ELK3 183905 sc-eQTL 1.31e-01 0.12 0.0793 0.605 CD8_CTL L2
ENSG00000136014 USP44 826804 sc-eQTL 9.04e-01 0.0107 0.0888 0.605 CD8_CTL L2
ENSG00000139343 SNRPF 519352 sc-eQTL 9.88e-01 -0.00109 0.0732 0.605 CD8_CTL L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.75e-01 -0.013 0.0821 0.605 CD8_CTL L2
ENSG00000059758 CDK17 -22200 sc-eQTL 6.07e-01 -0.0298 0.0578 0.605 CD8_Naive L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.56e-02 0.141 0.0762 0.605 CD8_Naive L2
ENSG00000111144 LTA4H 334760 sc-eQTL 5.98e-01 0.0366 0.0692 0.605 CD8_Naive L2
ENSG00000111145 ELK3 183905 sc-eQTL 2.91e-01 0.0773 0.0731 0.605 CD8_Naive L2
ENSG00000136014 USP44 826804 sc-eQTL 2.77e-01 -0.0837 0.0767 0.605 CD8_Naive L2
ENSG00000139343 SNRPF 519352 sc-eQTL 4.02e-01 0.0552 0.0658 0.605 CD8_Naive L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 4.84e-02 -0.154 0.0777 0.605 CD8_Naive L2
ENSG00000059758 CDK17 -22200 sc-eQTL 5.24e-01 0.0408 0.0639 0.597 CD8_TCM L2
ENSG00000111142 METAP2 904760 sc-eQTL 9.68e-01 -0.00388 0.0954 0.597 CD8_TCM L2
ENSG00000111144 LTA4H 334760 sc-eQTL 6.13e-01 -0.0475 0.0939 0.597 CD8_TCM L2
ENSG00000111145 ELK3 183905 sc-eQTL 6.65e-01 -0.0345 0.0796 0.597 CD8_TCM L2
ENSG00000136014 USP44 826804 sc-eQTL 9.53e-01 -0.00508 0.0862 0.597 CD8_TCM L2
ENSG00000139343 SNRPF 519352 sc-eQTL 3.75e-01 0.0813 0.0915 0.597 CD8_TCM L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 4.70e-01 -0.0648 0.0896 0.597 CD8_TCM L2
ENSG00000059758 CDK17 -22200 sc-eQTL 2.09e-01 0.0968 0.0768 0.612 CD8_TEM L2
ENSG00000111142 METAP2 904760 sc-eQTL 9.63e-01 0.00424 0.0906 0.612 CD8_TEM L2
ENSG00000111144 LTA4H 334760 sc-eQTL 6.66e-01 -0.0409 0.0944 0.612 CD8_TEM L2
ENSG00000111145 ELK3 183905 sc-eQTL 1.82e-01 -0.124 0.0924 0.612 CD8_TEM L2
ENSG00000136014 USP44 826804 sc-eQTL 2.86e-01 0.0844 0.0788 0.612 CD8_TEM L2
ENSG00000139343 SNRPF 519352 sc-eQTL 7.51e-01 -0.0274 0.0863 0.612 CD8_TEM L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 2.13e-02 -0.215 0.0924 0.612 CD8_TEM L2
ENSG00000059758 CDK17 -22200 sc-eQTL 1.92e-02 -0.122 0.0517 0.606 MAIT L2
ENSG00000074527 NTN4 587128 sc-eQTL 6.39e-01 0.0332 0.0705 0.606 MAIT L2
ENSG00000111142 METAP2 904760 sc-eQTL 1.17e-01 0.139 0.0883 0.606 MAIT L2
ENSG00000111144 LTA4H 334760 sc-eQTL 7.54e-01 0.0254 0.0809 0.606 MAIT L2
ENSG00000111145 ELK3 183905 sc-eQTL 7.86e-01 0.0185 0.0679 0.606 MAIT L2
ENSG00000139343 SNRPF 519352 sc-eQTL 7.55e-01 0.0245 0.0787 0.606 MAIT L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 2.67e-02 -0.195 0.0873 0.606 MAIT L2
ENSG00000188596 CFAP54 -111291 sc-eQTL 9.96e-01 -0.000413 0.0875 0.606 MAIT L2
ENSG00000059758 CDK17 -22200 sc-eQTL 3.92e-01 0.0466 0.0543 0.607 NK_CD56bright L2
ENSG00000111142 METAP2 904760 sc-eQTL 9.00e-01 0.0116 0.0919 0.607 NK_CD56bright L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.14e-01 -0.0999 0.0802 0.607 NK_CD56bright L2
ENSG00000111145 ELK3 183905 sc-eQTL 3.63e-01 0.0777 0.0853 0.607 NK_CD56bright L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.86e-01 0.0361 0.0894 0.607 NK_CD56bright L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 8.61e-01 0.0158 0.0902 0.607 NK_CD56bright L2
ENSG00000059758 CDK17 -22200 sc-eQTL 9.18e-03 0.121 0.0461 0.606 NK_CD56dim L2
ENSG00000111142 METAP2 904760 sc-eQTL 5.65e-01 0.0473 0.0821 0.606 NK_CD56dim L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.81e-01 -0.0914 0.0845 0.606 NK_CD56dim L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.18e-01 -0.00777 0.075 0.606 NK_CD56dim L2
ENSG00000139343 SNRPF 519352 sc-eQTL 5.89e-01 -0.0386 0.0713 0.606 NK_CD56dim L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.01e-01 -0.135 0.0817 0.606 NK_CD56dim L2
ENSG00000059758 CDK17 -22200 sc-eQTL 1.88e-01 -0.0964 0.073 0.607 NK_HLA L2
ENSG00000111142 METAP2 904760 sc-eQTL 3.21e-01 0.0917 0.0921 0.607 NK_HLA L2
ENSG00000111144 LTA4H 334760 sc-eQTL 3.60e-01 -0.0879 0.0959 0.607 NK_HLA L2
ENSG00000111145 ELK3 183905 sc-eQTL 4.56e-01 0.0665 0.089 0.607 NK_HLA L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.38e-01 0.0438 0.0928 0.607 NK_HLA L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 6.47e-01 -0.0403 0.0878 0.607 NK_HLA L2
ENSG00000059758 CDK17 -22200 sc-eQTL 2.82e-01 0.0553 0.0513 0.606 NK_cytokine L2
ENSG00000111142 METAP2 904760 sc-eQTL 2.44e-01 0.0995 0.0851 0.606 NK_cytokine L2
ENSG00000111144 LTA4H 334760 sc-eQTL 7.77e-01 -0.0246 0.0869 0.606 NK_cytokine L2
ENSG00000111145 ELK3 183905 sc-eQTL 4.61e-01 0.0614 0.0831 0.606 NK_cytokine L2
ENSG00000139343 SNRPF 519352 sc-eQTL 4.13e-01 0.0577 0.0704 0.606 NK_cytokine L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.64e-01 -0.121 0.0867 0.606 NK_cytokine L2
ENSG00000059758 CDK17 -22200 sc-eQTL 1.20e-01 0.143 0.0914 0.619 PB L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.18e-01 0.054 0.108 0.619 PB L2
ENSG00000111144 LTA4H 334760 sc-eQTL 1.51e-01 -0.117 0.0808 0.619 PB L2
ENSG00000111145 ELK3 183905 sc-eQTL 2.85e-01 0.112 0.104 0.619 PB L2
ENSG00000136014 USP44 826804 sc-eQTL 1.29e-01 -0.146 0.0957 0.619 PB L2
ENSG00000139343 SNRPF 519352 sc-eQTL 3.58e-01 -0.0937 0.102 0.619 PB L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 6.27e-01 0.059 0.121 0.619 PB L2
ENSG00000059758 CDK17 -22200 sc-eQTL 9.28e-01 -0.00514 0.057 0.602 Pro_T L2
ENSG00000074527 NTN4 587128 sc-eQTL 1.47e-01 0.0926 0.0636 0.602 Pro_T L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.96e-01 0.0296 0.0755 0.602 Pro_T L2
ENSG00000111144 LTA4H 334760 sc-eQTL 1.36e-01 -0.112 0.0748 0.602 Pro_T L2
ENSG00000111145 ELK3 183905 sc-eQTL 7.43e-01 -0.0299 0.0909 0.602 Pro_T L2
ENSG00000139343 SNRPF 519352 sc-eQTL 7.95e-01 0.0149 0.0573 0.602 Pro_T L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 7.58e-01 0.0257 0.0833 0.602 Pro_T L2
ENSG00000188596 CFAP54 -111291 sc-eQTL 6.47e-01 -0.0308 0.0674 0.602 Pro_T L2
ENSG00000059758 CDK17 -22200 sc-eQTL 3.35e-01 -0.0605 0.0626 0.605 Treg L2
ENSG00000111142 METAP2 904760 sc-eQTL 3.15e-01 0.0858 0.0852 0.605 Treg L2
ENSG00000111144 LTA4H 334760 sc-eQTL 7.99e-01 -0.0202 0.0794 0.605 Treg L2
ENSG00000111145 ELK3 183905 sc-eQTL 8.94e-01 -0.00965 0.072 0.605 Treg L2
ENSG00000136014 USP44 826804 sc-eQTL 4.12e-01 0.0663 0.0807 0.605 Treg L2
ENSG00000139343 SNRPF 519352 sc-eQTL 1.32e-02 0.205 0.0822 0.605 Treg L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 7.45e-01 -0.0303 0.093 0.605 Treg L2
ENSG00000059758 CDK17 -22200 sc-eQTL 2.20e-01 0.0941 0.0765 0.585 cDC L2
ENSG00000084110 HAL 381915 sc-eQTL 9.36e-01 -0.00646 0.0799 0.585 cDC L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.31e-01 0.0464 0.0964 0.585 cDC L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.74e-01 0.0749 0.0682 0.585 cDC L2
ENSG00000111145 ELK3 183905 sc-eQTL 3.08e-01 0.0921 0.0901 0.585 cDC L2
ENSG00000139343 SNRPF 519352 sc-eQTL 4.99e-01 -0.0512 0.0755 0.585 cDC L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.56e-01 -0.131 0.0917 0.585 cDC L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 6.95e-01 -0.0305 0.0777 0.585 cDC L2
ENSG00000059758 CDK17 -22200 sc-eQTL 9.49e-03 -0.173 0.0662 0.605 cMono_IL1B L2
ENSG00000084110 HAL 381915 sc-eQTL 2.39e-01 0.0863 0.0732 0.605 cMono_IL1B L2
ENSG00000111142 METAP2 904760 sc-eQTL 2.78e-01 0.0825 0.0759 0.605 cMono_IL1B L2
ENSG00000111144 LTA4H 334760 sc-eQTL 9.29e-01 -0.00712 0.0793 0.605 cMono_IL1B L2
ENSG00000111145 ELK3 183905 sc-eQTL 7.05e-01 -0.0231 0.0611 0.605 cMono_IL1B L2
ENSG00000139343 SNRPF 519352 sc-eQTL 6.04e-01 0.0327 0.063 0.605 cMono_IL1B L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 6.04e-01 -0.0451 0.0867 0.605 cMono_IL1B L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 1.96e-01 0.105 0.0807 0.605 cMono_IL1B L2
ENSG00000059758 CDK17 -22200 sc-eQTL 2.03e-02 -0.177 0.0759 0.605 cMono_S100A L2
ENSG00000084110 HAL 381915 sc-eQTL 8.62e-02 0.148 0.0856 0.605 cMono_S100A L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.94e-02 0.158 0.0866 0.605 cMono_S100A L2
ENSG00000111144 LTA4H 334760 sc-eQTL 8.88e-01 -0.0122 0.0862 0.605 cMono_S100A L2
ENSG00000111145 ELK3 183905 sc-eQTL 5.93e-01 0.0375 0.0701 0.605 cMono_S100A L2
ENSG00000139343 SNRPF 519352 sc-eQTL 2.01e-01 -0.0886 0.0691 0.605 cMono_S100A L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 2.89e-01 -0.0992 0.0934 0.605 cMono_S100A L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 8.58e-01 -0.0158 0.0881 0.605 cMono_S100A L2
ENSG00000059758 CDK17 -22200 sc-eQTL 4.51e-01 0.0549 0.0725 0.603 gdT L2
ENSG00000074527 NTN4 587128 sc-eQTL 6.91e-01 0.0332 0.0833 0.603 gdT L2
ENSG00000111142 METAP2 904760 sc-eQTL 6.54e-01 0.0468 0.104 0.603 gdT L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.85e-01 0.116 0.108 0.603 gdT L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.49e-02 0.168 0.0996 0.603 gdT L2
ENSG00000139343 SNRPF 519352 sc-eQTL 1.90e-02 0.226 0.0952 0.603 gdT L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 9.24e-01 0.0102 0.107 0.603 gdT L2
ENSG00000188596 CFAP54 -111291 sc-eQTL 2.08e-01 0.118 0.0934 0.603 gdT L2
ENSG00000059758 CDK17 -22200 sc-eQTL 8.61e-01 0.0149 0.0854 0.598 intMono L2
ENSG00000084110 HAL 381915 sc-eQTL 3.73e-01 0.0769 0.0862 0.598 intMono L2
ENSG00000111142 METAP2 904760 sc-eQTL 7.57e-01 0.0303 0.0977 0.598 intMono L2
ENSG00000111144 LTA4H 334760 sc-eQTL 3.42e-01 0.0841 0.0883 0.598 intMono L2
ENSG00000111145 ELK3 183905 sc-eQTL 4.93e-01 -0.0541 0.0788 0.598 intMono L2
ENSG00000139343 SNRPF 519352 sc-eQTL 5.92e-02 -0.159 0.0836 0.598 intMono L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 9.38e-01 -0.00678 0.0876 0.598 intMono L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 1.81e-01 0.118 0.0877 0.598 intMono L2
ENSG00000059758 CDK17 -22200 sc-eQTL 7.57e-01 0.0214 0.0693 0.6 ncMono L2
ENSG00000084110 HAL 381915 sc-eQTL 6.30e-01 -0.0373 0.0773 0.6 ncMono L2
ENSG00000111142 METAP2 904760 sc-eQTL 9.08e-01 0.0108 0.0935 0.6 ncMono L2
ENSG00000111144 LTA4H 334760 sc-eQTL 5.02e-01 0.058 0.0861 0.6 ncMono L2
ENSG00000111145 ELK3 183905 sc-eQTL 6.42e-01 -0.0344 0.074 0.6 ncMono L2
ENSG00000139343 SNRPF 519352 sc-eQTL 2.57e-02 -0.168 0.0747 0.6 ncMono L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 9.91e-01 -0.000923 0.0803 0.6 ncMono L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 7.71e-01 -0.0267 0.0916 0.6 ncMono L2
ENSG00000059758 CDK17 -22200 sc-eQTL 7.35e-01 0.0304 0.0895 0.59 pDC L2
ENSG00000084110 HAL 381915 sc-eQTL 1.33e-02 0.185 0.0741 0.59 pDC L2
ENSG00000111142 METAP2 904760 sc-eQTL 8.84e-01 0.015 0.102 0.59 pDC L2
ENSG00000111144 LTA4H 334760 sc-eQTL 2.31e-01 -0.101 0.0842 0.59 pDC L2
ENSG00000111145 ELK3 183905 sc-eQTL 9.70e-01 0.00385 0.103 0.59 pDC L2
ENSG00000139343 SNRPF 519352 sc-eQTL 4.58e-01 0.0671 0.0901 0.59 pDC L2
ENSG00000139350 NEDD1 -528943 sc-eQTL 1.74e-01 0.135 0.099 0.59 pDC L2
ENSG00000257715 AC007298.1 352957 sc-eQTL 7.78e-01 0.0241 0.0854 0.59 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -22200 sc-eQTL 8.18e-01 -0.0137 0.0595 0.605 B_Memory LOneK1K
ENSG00000111142 METAP2 904760 sc-eQTL 1.39e-01 0.122 0.0823 0.605 B_Memory LOneK1K
ENSG00000111144 LTA4H 334760 sc-eQTL 6.04e-01 0.0321 0.0617 0.605 B_Memory LOneK1K
ENSG00000111145 ELK3 183905 sc-eQTL 2.47e-01 -0.0817 0.0704 0.605 B_Memory LOneK1K
ENSG00000136014 USP44 826804 sc-eQTL 4.25e-01 -0.0702 0.0878 0.605 B_Memory LOneK1K
ENSG00000139343 SNRPF 519352 sc-eQTL 1.41e-01 0.101 0.0681 0.605 B_Memory LOneK1K
ENSG00000139350 NEDD1 -528943 sc-eQTL 4.62e-01 -0.0661 0.0896 0.605 B_Memory LOneK1K
ENSG00000059758 CDK17 -22200 sc-eQTL 1.62e-01 -0.0722 0.0515 0.605 B_Naive LOneK1K
ENSG00000111142 METAP2 904760 sc-eQTL 7.19e-01 0.0252 0.07 0.605 B_Naive LOneK1K
ENSG00000111144 LTA4H 334760 sc-eQTL 6.48e-01 0.0265 0.058 0.605 B_Naive LOneK1K
ENSG00000111145 ELK3 183905 sc-eQTL 3.89e-01 -0.0569 0.066 0.605 B_Naive LOneK1K
ENSG00000136014 USP44 826804 sc-eQTL 9.98e-01 0.000218 0.0808 0.605 B_Naive LOneK1K
ENSG00000139343 SNRPF 519352 sc-eQTL 5.17e-01 0.0431 0.0665 0.605 B_Naive LOneK1K
ENSG00000139350 NEDD1 -528943 sc-eQTL 6.42e-01 0.041 0.088 0.605 B_Naive LOneK1K
ENSG00000059758 CDK17 -22200 sc-eQTL 3.91e-03 -0.176 0.0603 0.605 CD14_Mono LOneK1K
ENSG00000084110 HAL 381915 sc-eQTL 1.64e-01 0.104 0.0742 0.605 CD14_Mono LOneK1K
ENSG00000111142 METAP2 904760 sc-eQTL 7.95e-02 0.123 0.0697 0.605 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 334760 sc-eQTL 7.50e-01 0.0261 0.0818 0.605 CD14_Mono LOneK1K
ENSG00000111145 ELK3 183905 sc-eQTL 8.40e-01 -0.0119 0.0591 0.605 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 519352 sc-eQTL 5.99e-01 -0.03 0.057 0.605 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -528943 sc-eQTL 3.19e-01 -0.0891 0.0893 0.605 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 352957 sc-eQTL 4.73e-01 0.0594 0.0828 0.605 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -22200 sc-eQTL 8.39e-01 -0.0126 0.0622 0.606 CD16_Mono LOneK1K
ENSG00000084110 HAL 381915 sc-eQTL 8.61e-01 0.0129 0.0735 0.606 CD16_Mono LOneK1K
ENSG00000111142 METAP2 904760 sc-eQTL 5.73e-01 0.047 0.0833 0.606 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 334760 sc-eQTL 7.07e-01 0.0307 0.0815 0.606 CD16_Mono LOneK1K
ENSG00000111145 ELK3 183905 sc-eQTL 1.53e-01 -0.086 0.06 0.606 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 519352 sc-eQTL 1.10e-01 -0.0992 0.0618 0.606 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -528943 sc-eQTL 5.57e-01 -0.0469 0.0797 0.606 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 352957 sc-eQTL 9.25e-01 -0.00796 0.0844 0.606 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -22200 sc-eQTL 5.68e-02 0.0831 0.0434 0.606 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 904760 sc-eQTL 3.54e-01 0.0617 0.0664 0.606 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 334760 sc-eQTL 3.94e-01 -0.0649 0.076 0.606 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 183905 sc-eQTL 4.82e-01 0.049 0.0696 0.606 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 519352 sc-eQTL 7.70e-01 0.0175 0.0596 0.606 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -528943 sc-eQTL 7.25e-02 -0.133 0.0737 0.606 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 183905 eQTL 2.25e-05 -0.0721 0.0169 0.0 0.0 0.401
ENSG00000257715 AC007298.1 352957 eQTL 0.0471 -0.0377 0.0189 0.0 0.0 0.401

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 183905 4.7e-06 4.74e-06 8.72e-07 2.13e-06 8.72e-07 1.03e-06 3e-06 8.31e-07 2.88e-06 1.73e-06 4.1e-06 2.52e-06 7.02e-06 1.84e-06 1.39e-06 2.34e-06 1.56e-06 2.76e-06 1.47e-06 9.46e-07 1.99e-06 4.22e-06 3.37e-06 1.81e-06 4.72e-06 1.21e-06 2.35e-06 1.47e-06 3.82e-06 3.62e-06 2.25e-06 5.93e-07 6.49e-07 1.8e-06 1.92e-06 8.88e-07 9.25e-07 4.73e-07 1.26e-06 3.46e-07 3.05e-07 4.9e-06 4.37e-07 1.81e-07 3.69e-07 9.83e-07 7.44e-07 2.23e-07 3.35e-07
ENSG00000188596 \N -111295 9.14e-06 9.78e-06 1.33e-06 4.85e-06 2.13e-06 3.26e-06 9.57e-06 1.45e-06 7.29e-06 4.46e-06 1.05e-05 4.77e-06 1.3e-05 3.85e-06 2.39e-06 6.09e-06 3.85e-06 5.96e-06 2.61e-06 2.82e-06 4.46e-06 8.24e-06 6.78e-06 2.9e-06 1.19e-05 2.58e-06 4.6e-06 3.07e-06 7.52e-06 7.73e-06 4.94e-06 7.89e-07 7.68e-07 2.78e-06 3.53e-06 2.1e-06 1.39e-06 1.45e-06 1.3e-06 1.03e-06 6.7e-07 1.24e-05 1.35e-06 1.58e-07 6.83e-07 1.63e-06 1.12e-06 6.46e-07 5.39e-07