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Genes within 1Mb (chr12:96365593:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -34887 sc-eQTL 5.76e-01 -0.0364 0.065 0.848 B L1
ENSG00000111142 METAP2 892073 sc-eQTL 8.88e-01 0.013 0.0921 0.848 B L1
ENSG00000111144 LTA4H 322073 sc-eQTL 1.83e-01 0.108 0.0805 0.848 B L1
ENSG00000111145 ELK3 171218 sc-eQTL 6.85e-02 -0.156 0.0854 0.848 B L1
ENSG00000136014 USP44 814117 sc-eQTL 7.80e-01 0.0297 0.106 0.848 B L1
ENSG00000139343 SNRPF 506665 sc-eQTL 7.23e-01 0.0277 0.0782 0.848 B L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 5.62e-01 0.0663 0.114 0.848 B L1
ENSG00000059758 CDK17 -34887 sc-eQTL 6.92e-01 -0.0211 0.0531 0.848 CD4T L1
ENSG00000111142 METAP2 892073 sc-eQTL 4.93e-01 0.0508 0.074 0.848 CD4T L1
ENSG00000111144 LTA4H 322073 sc-eQTL 7.34e-01 -0.0248 0.0729 0.848 CD4T L1
ENSG00000111145 ELK3 171218 sc-eQTL 8.18e-01 -0.0182 0.079 0.848 CD4T L1
ENSG00000136014 USP44 814117 sc-eQTL 4.35e-01 -0.088 0.113 0.848 CD4T L1
ENSG00000139343 SNRPF 506665 sc-eQTL 8.53e-01 -0.0128 0.0691 0.848 CD4T L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 5.13e-01 -0.0557 0.085 0.848 CD4T L1
ENSG00000059758 CDK17 -34887 sc-eQTL 4.36e-02 -0.112 0.0551 0.848 CD8T L1
ENSG00000111142 METAP2 892073 sc-eQTL 9.68e-01 -0.00361 0.0898 0.848 CD8T L1
ENSG00000111144 LTA4H 322073 sc-eQTL 3.60e-01 -0.0547 0.0596 0.848 CD8T L1
ENSG00000111145 ELK3 171218 sc-eQTL 3.19e-01 -0.0896 0.0897 0.848 CD8T L1
ENSG00000136014 USP44 814117 sc-eQTL 6.02e-01 -0.0534 0.102 0.848 CD8T L1
ENSG00000139343 SNRPF 506665 sc-eQTL 3.45e-01 0.0696 0.0735 0.848 CD8T L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 2.54e-02 -0.218 0.0968 0.848 CD8T L1
ENSG00000059758 CDK17 -34887 sc-eQTL 5.69e-01 0.0576 0.101 0.849 DC L1
ENSG00000084110 HAL 369228 sc-eQTL 2.29e-01 0.138 0.115 0.849 DC L1
ENSG00000111142 METAP2 892073 sc-eQTL 8.87e-01 0.018 0.127 0.849 DC L1
ENSG00000111144 LTA4H 322073 sc-eQTL 5.32e-01 0.0589 0.094 0.849 DC L1
ENSG00000111145 ELK3 171218 sc-eQTL 1.78e-01 0.155 0.115 0.849 DC L1
ENSG00000139343 SNRPF 506665 sc-eQTL 1.48e-01 0.139 0.0953 0.849 DC L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.32e-01 0.0105 0.123 0.849 DC L1
ENSG00000257715 AC007298.1 340270 sc-eQTL 4.43e-01 -0.0851 0.111 0.849 DC L1
ENSG00000059758 CDK17 -34887 sc-eQTL 4.80e-04 -0.28 0.079 0.848 Mono L1
ENSG00000084110 HAL 369228 sc-eQTL 1.64e-01 0.142 0.102 0.848 Mono L1
ENSG00000111142 METAP2 892073 sc-eQTL 9.27e-02 0.148 0.0879 0.848 Mono L1
ENSG00000111144 LTA4H 322073 sc-eQTL 1.68e-01 0.159 0.115 0.848 Mono L1
ENSG00000111145 ELK3 171218 sc-eQTL 2.98e-02 -0.168 0.0768 0.848 Mono L1
ENSG00000139343 SNRPF 506665 sc-eQTL 6.99e-01 -0.0283 0.0732 0.848 Mono L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.70e-01 -0.048 0.112 0.848 Mono L1
ENSG00000257715 AC007298.1 340270 sc-eQTL 3.15e-02 0.233 0.108 0.848 Mono L1
ENSG00000059758 CDK17 -34887 sc-eQTL 1.76e-01 -0.0813 0.06 0.85 NK L1
ENSG00000111142 METAP2 892073 sc-eQTL 3.52e-01 0.083 0.089 0.85 NK L1
ENSG00000111144 LTA4H 322073 sc-eQTL 7.62e-02 -0.181 0.101 0.85 NK L1
ENSG00000111145 ELK3 171218 sc-eQTL 3.78e-01 -0.0854 0.0968 0.85 NK L1
ENSG00000139343 SNRPF 506665 sc-eQTL 7.92e-01 -0.0212 0.0804 0.85 NK L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.41e-01 -0.15 0.101 0.85 NK L1
ENSG00000059758 CDK17 -34887 sc-eQTL 1.11e-01 -0.0801 0.05 0.848 Other_T L1
ENSG00000074527 NTN4 574441 sc-eQTL 5.47e-01 0.0561 0.093 0.848 Other_T L1
ENSG00000111142 METAP2 892073 sc-eQTL 9.79e-01 -0.00258 0.0961 0.848 Other_T L1
ENSG00000111144 LTA4H 322073 sc-eQTL 3.63e-02 -0.219 0.104 0.848 Other_T L1
ENSG00000111145 ELK3 171218 sc-eQTL 7.84e-01 -0.0226 0.0821 0.848 Other_T L1
ENSG00000139343 SNRPF 506665 sc-eQTL 5.55e-01 -0.0451 0.0762 0.848 Other_T L1
ENSG00000139350 NEDD1 -541630 sc-eQTL 8.90e-01 0.0161 0.116 0.848 Other_T L1
ENSG00000188596 CFAP54 -123978 sc-eQTL 2.88e-01 -0.128 0.12 0.848 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -34887 sc-eQTL 7.22e-01 -0.0412 0.116 0.847 B_Activated L2
ENSG00000111142 METAP2 892073 sc-eQTL 8.98e-01 0.0187 0.146 0.847 B_Activated L2
ENSG00000111144 LTA4H 322073 sc-eQTL 7.68e-01 0.0387 0.131 0.847 B_Activated L2
ENSG00000111145 ELK3 171218 sc-eQTL 2.78e-01 -0.15 0.138 0.847 B_Activated L2
ENSG00000136014 USP44 814117 sc-eQTL 4.42e-01 -0.082 0.106 0.847 B_Activated L2
ENSG00000139343 SNRPF 506665 sc-eQTL 1.04e-01 -0.212 0.13 0.847 B_Activated L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.01e-01 0.0715 0.137 0.847 B_Activated L2
ENSG00000059758 CDK17 -34887 sc-eQTL 3.62e-01 -0.0909 0.0995 0.848 B_Intermediate L2
ENSG00000111142 METAP2 892073 sc-eQTL 8.29e-01 -0.0247 0.114 0.848 B_Intermediate L2
ENSG00000111144 LTA4H 322073 sc-eQTL 6.48e-01 0.0441 0.0965 0.848 B_Intermediate L2
ENSG00000111145 ELK3 171218 sc-eQTL 8.44e-01 -0.0215 0.109 0.848 B_Intermediate L2
ENSG00000136014 USP44 814117 sc-eQTL 9.20e-01 0.0128 0.128 0.848 B_Intermediate L2
ENSG00000139343 SNRPF 506665 sc-eQTL 7.18e-01 0.0392 0.108 0.848 B_Intermediate L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.99e-01 -0.000152 0.127 0.848 B_Intermediate L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.53e-01 0.0565 0.095 0.847 B_Memory L2
ENSG00000111142 METAP2 892073 sc-eQTL 7.95e-01 0.0322 0.124 0.847 B_Memory L2
ENSG00000111144 LTA4H 322073 sc-eQTL 2.26e-01 0.133 0.109 0.847 B_Memory L2
ENSG00000111145 ELK3 171218 sc-eQTL 6.79e-01 -0.0447 0.108 0.847 B_Memory L2
ENSG00000136014 USP44 814117 sc-eQTL 3.44e-01 -0.112 0.118 0.847 B_Memory L2
ENSG00000139343 SNRPF 506665 sc-eQTL 6.26e-01 0.0558 0.114 0.847 B_Memory L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.91e-02 -0.295 0.125 0.847 B_Memory L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.50e-01 -0.048 0.0801 0.848 B_Naive1 L2
ENSG00000111142 METAP2 892073 sc-eQTL 6.92e-01 0.0411 0.104 0.848 B_Naive1 L2
ENSG00000111144 LTA4H 322073 sc-eQTL 7.34e-02 0.15 0.0833 0.848 B_Naive1 L2
ENSG00000111145 ELK3 171218 sc-eQTL 2.71e-01 -0.109 0.0989 0.848 B_Naive1 L2
ENSG00000136014 USP44 814117 sc-eQTL 6.11e-01 -0.0634 0.125 0.848 B_Naive1 L2
ENSG00000139343 SNRPF 506665 sc-eQTL 3.15e-01 0.097 0.0963 0.848 B_Naive1 L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 5.82e-01 0.0682 0.124 0.848 B_Naive1 L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.61e-01 -0.0585 0.1 0.848 B_Naive2 L2
ENSG00000111142 METAP2 892073 sc-eQTL 3.63e-01 -0.111 0.121 0.848 B_Naive2 L2
ENSG00000111144 LTA4H 322073 sc-eQTL 9.27e-01 0.00872 0.0953 0.848 B_Naive2 L2
ENSG00000111145 ELK3 171218 sc-eQTL 3.94e-01 -0.0958 0.112 0.848 B_Naive2 L2
ENSG00000136014 USP44 814117 sc-eQTL 2.04e-01 -0.154 0.121 0.848 B_Naive2 L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.90e-01 0.0771 0.111 0.848 B_Naive2 L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 4.39e-01 0.103 0.132 0.848 B_Naive2 L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.59e-01 -0.105 0.0925 0.845 CD4_CTL L2
ENSG00000111142 METAP2 892073 sc-eQTL 3.82e-01 -0.116 0.133 0.845 CD4_CTL L2
ENSG00000111144 LTA4H 322073 sc-eQTL 1.33e-02 -0.322 0.129 0.845 CD4_CTL L2
ENSG00000111145 ELK3 171218 sc-eQTL 9.12e-01 0.0146 0.132 0.845 CD4_CTL L2
ENSG00000136014 USP44 814117 sc-eQTL 4.39e-01 0.0818 0.106 0.845 CD4_CTL L2
ENSG00000139343 SNRPF 506665 sc-eQTL 6.36e-01 -0.0546 0.115 0.845 CD4_CTL L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.84e-01 0.0543 0.133 0.845 CD4_CTL L2
ENSG00000059758 CDK17 -34887 sc-eQTL 9.40e-01 0.00444 0.0584 0.848 CD4_Naive L2
ENSG00000111142 METAP2 892073 sc-eQTL 4.76e-01 0.0601 0.0842 0.848 CD4_Naive L2
ENSG00000111144 LTA4H 322073 sc-eQTL 9.81e-01 0.00199 0.0845 0.848 CD4_Naive L2
ENSG00000111145 ELK3 171218 sc-eQTL 5.39e-01 -0.0519 0.0845 0.848 CD4_Naive L2
ENSG00000136014 USP44 814117 sc-eQTL 5.79e-01 -0.0657 0.118 0.848 CD4_Naive L2
ENSG00000139343 SNRPF 506665 sc-eQTL 7.51e-01 0.0238 0.0751 0.848 CD4_Naive L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.92e-01 -0.12 0.0921 0.848 CD4_Naive L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.26e-01 -0.0691 0.057 0.848 CD4_TCM L2
ENSG00000111142 METAP2 892073 sc-eQTL 5.91e-01 -0.0523 0.0973 0.848 CD4_TCM L2
ENSG00000111144 LTA4H 322073 sc-eQTL 5.73e-01 -0.0547 0.0969 0.848 CD4_TCM L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.81e-01 -0.128 0.095 0.848 CD4_TCM L2
ENSG00000136014 USP44 814117 sc-eQTL 9.58e-01 -0.0069 0.132 0.848 CD4_TCM L2
ENSG00000139343 SNRPF 506665 sc-eQTL 8.97e-01 -0.0102 0.0782 0.848 CD4_TCM L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 3.07e-01 0.109 0.107 0.848 CD4_TCM L2
ENSG00000059758 CDK17 -34887 sc-eQTL 6.64e-01 -0.0306 0.0703 0.848 CD4_TEM L2
ENSG00000111142 METAP2 892073 sc-eQTL 4.63e-01 -0.0862 0.117 0.848 CD4_TEM L2
ENSG00000111144 LTA4H 322073 sc-eQTL 2.00e-01 -0.139 0.108 0.848 CD4_TEM L2
ENSG00000111145 ELK3 171218 sc-eQTL 7.77e-01 -0.0286 0.101 0.848 CD4_TEM L2
ENSG00000136014 USP44 814117 sc-eQTL 9.54e-01 0.00717 0.124 0.848 CD4_TEM L2
ENSG00000139343 SNRPF 506665 sc-eQTL 5.21e-01 -0.0679 0.106 0.848 CD4_TEM L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 2.86e-01 -0.134 0.125 0.848 CD4_TEM L2
ENSG00000059758 CDK17 -34887 sc-eQTL 6.45e-03 -0.184 0.0667 0.848 CD8_CTL L2
ENSG00000111142 METAP2 892073 sc-eQTL 3.52e-01 -0.109 0.117 0.848 CD8_CTL L2
ENSG00000111144 LTA4H 322073 sc-eQTL 1.68e-01 -0.169 0.122 0.848 CD8_CTL L2
ENSG00000111145 ELK3 171218 sc-eQTL 4.11e-01 -0.0919 0.111 0.848 CD8_CTL L2
ENSG00000136014 USP44 814117 sc-eQTL 2.61e-01 0.14 0.124 0.848 CD8_CTL L2
ENSG00000139343 SNRPF 506665 sc-eQTL 6.44e-01 0.0475 0.103 0.848 CD8_CTL L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 4.51e-01 0.0869 0.115 0.848 CD8_CTL L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.27e-01 -0.0989 0.0816 0.848 CD8_Naive L2
ENSG00000111142 METAP2 892073 sc-eQTL 3.15e-01 0.109 0.109 0.848 CD8_Naive L2
ENSG00000111144 LTA4H 322073 sc-eQTL 5.99e-01 0.0516 0.098 0.848 CD8_Naive L2
ENSG00000111145 ELK3 171218 sc-eQTL 6.50e-01 -0.0471 0.104 0.848 CD8_Naive L2
ENSG00000136014 USP44 814117 sc-eQTL 9.82e-01 0.00249 0.109 0.848 CD8_Naive L2
ENSG00000139343 SNRPF 506665 sc-eQTL 9.77e-01 0.00269 0.0933 0.848 CD8_Naive L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 7.77e-03 -0.294 0.109 0.848 CD8_Naive L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.63e-01 0.0514 0.0887 0.84 CD8_TCM L2
ENSG00000111142 METAP2 892073 sc-eQTL 5.71e-01 -0.075 0.132 0.84 CD8_TCM L2
ENSG00000111144 LTA4H 322073 sc-eQTL 4.55e-01 0.0974 0.13 0.84 CD8_TCM L2
ENSG00000111145 ELK3 171218 sc-eQTL 4.68e-01 0.0802 0.11 0.84 CD8_TCM L2
ENSG00000136014 USP44 814117 sc-eQTL 2.03e-01 0.152 0.119 0.84 CD8_TCM L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.06e-01 -0.106 0.127 0.84 CD8_TCM L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.03e-04 -0.475 0.12 0.84 CD8_TCM L2
ENSG00000059758 CDK17 -34887 sc-eQTL 7.87e-01 -0.0301 0.111 0.852 CD8_TEM L2
ENSG00000111142 METAP2 892073 sc-eQTL 6.91e-01 -0.0519 0.13 0.852 CD8_TEM L2
ENSG00000111144 LTA4H 322073 sc-eQTL 5.93e-01 0.0729 0.136 0.852 CD8_TEM L2
ENSG00000111145 ELK3 171218 sc-eQTL 2.71e-01 -0.147 0.133 0.852 CD8_TEM L2
ENSG00000136014 USP44 814117 sc-eQTL 7.95e-01 -0.0296 0.114 0.852 CD8_TEM L2
ENSG00000139343 SNRPF 506665 sc-eQTL 8.77e-01 0.0192 0.124 0.852 CD8_TEM L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 3.22e-01 -0.134 0.135 0.852 CD8_TEM L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.87e-03 -0.218 0.0723 0.851 MAIT L2
ENSG00000074527 NTN4 574441 sc-eQTL 2.85e-01 0.106 0.0993 0.851 MAIT L2
ENSG00000111142 METAP2 892073 sc-eQTL 5.67e-01 0.0717 0.125 0.851 MAIT L2
ENSG00000111144 LTA4H 322073 sc-eQTL 2.09e-01 -0.143 0.114 0.851 MAIT L2
ENSG00000111145 ELK3 171218 sc-eQTL 6.39e-01 -0.045 0.0957 0.851 MAIT L2
ENSG00000139343 SNRPF 506665 sc-eQTL 6.13e-01 -0.0561 0.111 0.851 MAIT L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 3.47e-01 -0.117 0.124 0.851 MAIT L2
ENSG00000188596 CFAP54 -123978 sc-eQTL 8.51e-01 -0.0232 0.123 0.851 MAIT L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.72e-01 -0.0842 0.0764 0.844 NK_CD56bright L2
ENSG00000111142 METAP2 892073 sc-eQTL 9.26e-02 0.217 0.128 0.844 NK_CD56bright L2
ENSG00000111144 LTA4H 322073 sc-eQTL 5.66e-01 -0.0651 0.113 0.844 NK_CD56bright L2
ENSG00000111145 ELK3 171218 sc-eQTL 5.25e-01 0.0765 0.12 0.844 NK_CD56bright L2
ENSG00000139343 SNRPF 506665 sc-eQTL 5.79e-01 0.0698 0.126 0.844 NK_CD56bright L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 4.57e-01 -0.0945 0.127 0.844 NK_CD56bright L2
ENSG00000059758 CDK17 -34887 sc-eQTL 6.65e-01 -0.028 0.0644 0.849 NK_CD56dim L2
ENSG00000111142 METAP2 892073 sc-eQTL 5.39e-01 0.0695 0.113 0.849 NK_CD56dim L2
ENSG00000111144 LTA4H 322073 sc-eQTL 6.89e-02 -0.211 0.116 0.849 NK_CD56dim L2
ENSG00000111145 ELK3 171218 sc-eQTL 2.77e-01 -0.112 0.103 0.849 NK_CD56dim L2
ENSG00000139343 SNRPF 506665 sc-eQTL 6.45e-01 -0.0452 0.098 0.849 NK_CD56dim L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 7.70e-01 -0.0331 0.113 0.849 NK_CD56dim L2
ENSG00000059758 CDK17 -34887 sc-eQTL 1.36e-01 -0.149 0.0995 0.842 NK_HLA L2
ENSG00000111142 METAP2 892073 sc-eQTL 9.95e-02 0.207 0.125 0.842 NK_HLA L2
ENSG00000111144 LTA4H 322073 sc-eQTL 3.53e-02 -0.275 0.13 0.842 NK_HLA L2
ENSG00000111145 ELK3 171218 sc-eQTL 8.97e-01 0.0158 0.122 0.842 NK_HLA L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.20e-01 0.102 0.127 0.842 NK_HLA L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.78e-01 -0.0499 0.12 0.842 NK_HLA L2
ENSG00000059758 CDK17 -34887 sc-eQTL 1.47e-01 -0.103 0.0707 0.849 NK_cytokine L2
ENSG00000111142 METAP2 892073 sc-eQTL 7.73e-01 -0.034 0.118 0.849 NK_cytokine L2
ENSG00000111144 LTA4H 322073 sc-eQTL 2.50e-02 -0.268 0.119 0.849 NK_cytokine L2
ENSG00000111145 ELK3 171218 sc-eQTL 7.40e-01 -0.0382 0.115 0.849 NK_cytokine L2
ENSG00000139343 SNRPF 506665 sc-eQTL 8.88e-01 0.0137 0.0974 0.849 NK_cytokine L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 8.31e-02 -0.208 0.12 0.849 NK_cytokine L2
ENSG00000059758 CDK17 -34887 sc-eQTL 9.49e-01 -0.00877 0.137 0.852 PB L2
ENSG00000111142 METAP2 892073 sc-eQTL 8.43e-01 0.0319 0.161 0.852 PB L2
ENSG00000111144 LTA4H 322073 sc-eQTL 3.39e-01 -0.116 0.121 0.852 PB L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.37e-01 -0.23 0.154 0.852 PB L2
ENSG00000136014 USP44 814117 sc-eQTL 2.06e-01 0.182 0.143 0.852 PB L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.85e-01 -0.106 0.151 0.852 PB L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 3.76e-01 0.16 0.18 0.852 PB L2
ENSG00000059758 CDK17 -34887 sc-eQTL 9.41e-01 -0.00584 0.0791 0.846 Pro_T L2
ENSG00000074527 NTN4 574441 sc-eQTL 4.26e-01 0.0708 0.0887 0.846 Pro_T L2
ENSG00000111142 METAP2 892073 sc-eQTL 2.52e-01 -0.12 0.105 0.846 Pro_T L2
ENSG00000111144 LTA4H 322073 sc-eQTL 3.34e-02 -0.221 0.103 0.846 Pro_T L2
ENSG00000111145 ELK3 171218 sc-eQTL 9.57e-01 0.00675 0.126 0.846 Pro_T L2
ENSG00000139343 SNRPF 506665 sc-eQTL 7.49e-01 -0.0255 0.0797 0.846 Pro_T L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.63e-01 0.00543 0.116 0.846 Pro_T L2
ENSG00000188596 CFAP54 -123978 sc-eQTL 6.33e-01 -0.0447 0.0936 0.846 Pro_T L2
ENSG00000059758 CDK17 -34887 sc-eQTL 2.60e-01 -0.101 0.0891 0.848 Treg L2
ENSG00000111142 METAP2 892073 sc-eQTL 3.61e-02 0.254 0.12 0.848 Treg L2
ENSG00000111144 LTA4H 322073 sc-eQTL 9.95e-01 0.00064 0.113 0.848 Treg L2
ENSG00000111145 ELK3 171218 sc-eQTL 8.24e-01 -0.0228 0.103 0.848 Treg L2
ENSG00000136014 USP44 814117 sc-eQTL 6.26e-01 0.0562 0.115 0.848 Treg L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.73e-01 -0.0852 0.119 0.848 Treg L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.17e-01 -0.0138 0.133 0.848 Treg L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.72e-01 -0.0601 0.106 0.844 cDC L2
ENSG00000084110 HAL 369228 sc-eQTL 6.38e-01 -0.052 0.11 0.844 cDC L2
ENSG00000111142 METAP2 892073 sc-eQTL 9.22e-01 -0.0131 0.133 0.844 cDC L2
ENSG00000111144 LTA4H 322073 sc-eQTL 8.38e-02 0.163 0.0938 0.844 cDC L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.00e-01 0.205 0.124 0.844 cDC L2
ENSG00000139343 SNRPF 506665 sc-eQTL 8.72e-01 0.0168 0.105 0.844 cDC L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 5.58e-02 -0.243 0.126 0.844 cDC L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 9.03e-01 0.0131 0.107 0.844 cDC L2
ENSG00000059758 CDK17 -34887 sc-eQTL 1.23e-03 -0.301 0.0919 0.848 cMono_IL1B L2
ENSG00000084110 HAL 369228 sc-eQTL 1.73e-01 0.14 0.102 0.848 cMono_IL1B L2
ENSG00000111142 METAP2 892073 sc-eQTL 7.89e-01 0.0285 0.107 0.848 cMono_IL1B L2
ENSG00000111144 LTA4H 322073 sc-eQTL 3.61e-01 0.101 0.111 0.848 cMono_IL1B L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.70e-01 -0.117 0.0852 0.848 cMono_IL1B L2
ENSG00000139343 SNRPF 506665 sc-eQTL 3.11e-01 0.0894 0.088 0.848 cMono_IL1B L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 8.56e-01 -0.0221 0.122 0.848 cMono_IL1B L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 1.68e-02 0.27 0.112 0.848 cMono_IL1B L2
ENSG00000059758 CDK17 -34887 sc-eQTL 1.77e-01 -0.144 0.106 0.848 cMono_S100A L2
ENSG00000084110 HAL 369228 sc-eQTL 3.17e-01 0.12 0.119 0.848 cMono_S100A L2
ENSG00000111142 METAP2 892073 sc-eQTL 4.10e-02 0.247 0.12 0.848 cMono_S100A L2
ENSG00000111144 LTA4H 322073 sc-eQTL 2.14e-01 0.149 0.119 0.848 cMono_S100A L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.71e-01 -0.133 0.097 0.848 cMono_S100A L2
ENSG00000139343 SNRPF 506665 sc-eQTL 2.81e-01 -0.104 0.096 0.848 cMono_S100A L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.72e-01 -0.055 0.13 0.848 cMono_S100A L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 9.56e-02 0.203 0.121 0.848 cMono_S100A L2
ENSG00000059758 CDK17 -34887 sc-eQTL 4.23e-01 -0.0819 0.102 0.836 gdT L2
ENSG00000074527 NTN4 574441 sc-eQTL 8.89e-01 -0.0163 0.117 0.836 gdT L2
ENSG00000111142 METAP2 892073 sc-eQTL 9.72e-01 0.00516 0.146 0.836 gdT L2
ENSG00000111144 LTA4H 322073 sc-eQTL 8.42e-01 -0.0306 0.153 0.836 gdT L2
ENSG00000111145 ELK3 171218 sc-eQTL 8.91e-01 -0.0194 0.141 0.836 gdT L2
ENSG00000139343 SNRPF 506665 sc-eQTL 9.61e-01 -0.00661 0.136 0.836 gdT L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 7.92e-01 0.0397 0.15 0.836 gdT L2
ENSG00000188596 CFAP54 -123978 sc-eQTL 4.01e-01 0.111 0.132 0.836 gdT L2
ENSG00000059758 CDK17 -34887 sc-eQTL 7.78e-01 -0.0341 0.121 0.851 intMono L2
ENSG00000084110 HAL 369228 sc-eQTL 9.12e-01 -0.0135 0.122 0.851 intMono L2
ENSG00000111142 METAP2 892073 sc-eQTL 2.32e-01 0.165 0.138 0.851 intMono L2
ENSG00000111144 LTA4H 322073 sc-eQTL 7.05e-01 0.0473 0.125 0.851 intMono L2
ENSG00000111145 ELK3 171218 sc-eQTL 1.34e-01 -0.167 0.111 0.851 intMono L2
ENSG00000139343 SNRPF 506665 sc-eQTL 9.65e-01 0.00518 0.119 0.851 intMono L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 7.76e-01 -0.0353 0.124 0.851 intMono L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 2.52e-01 0.143 0.124 0.851 intMono L2
ENSG00000059758 CDK17 -34887 sc-eQTL 5.87e-01 -0.0512 0.0941 0.846 ncMono L2
ENSG00000084110 HAL 369228 sc-eQTL 1.88e-01 0.138 0.105 0.846 ncMono L2
ENSG00000111142 METAP2 892073 sc-eQTL 7.20e-01 0.0456 0.127 0.846 ncMono L2
ENSG00000111144 LTA4H 322073 sc-eQTL 6.23e-02 0.218 0.116 0.846 ncMono L2
ENSG00000111145 ELK3 171218 sc-eQTL 2.90e-01 -0.106 0.1 0.846 ncMono L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.15e-01 -0.0839 0.103 0.846 ncMono L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.47e-01 -0.00733 0.109 0.846 ncMono L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 2.35e-01 0.148 0.124 0.846 ncMono L2
ENSG00000059758 CDK17 -34887 sc-eQTL 6.25e-01 0.0597 0.122 0.831 pDC L2
ENSG00000084110 HAL 369228 sc-eQTL 5.27e-03 0.284 0.1 0.831 pDC L2
ENSG00000111142 METAP2 892073 sc-eQTL 4.52e-01 0.105 0.139 0.831 pDC L2
ENSG00000111144 LTA4H 322073 sc-eQTL 7.02e-01 -0.0441 0.115 0.831 pDC L2
ENSG00000111145 ELK3 171218 sc-eQTL 7.91e-01 -0.0374 0.141 0.831 pDC L2
ENSG00000139343 SNRPF 506665 sc-eQTL 4.74e-01 0.0881 0.123 0.831 pDC L2
ENSG00000139350 NEDD1 -541630 sc-eQTL 2.91e-02 0.294 0.134 0.831 pDC L2
ENSG00000257715 AC007298.1 340270 sc-eQTL 5.42e-01 0.0711 0.116 0.831 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -34887 sc-eQTL 7.32e-01 -0.0288 0.0837 0.848 B_Memory LOneK1K
ENSG00000111142 METAP2 892073 sc-eQTL 6.95e-01 0.0457 0.116 0.848 B_Memory LOneK1K
ENSG00000111144 LTA4H 322073 sc-eQTL 8.45e-02 0.15 0.0864 0.848 B_Memory LOneK1K
ENSG00000111145 ELK3 171218 sc-eQTL 4.00e-01 -0.0836 0.0992 0.848 B_Memory LOneK1K
ENSG00000136014 USP44 814117 sc-eQTL 8.64e-01 0.0213 0.124 0.848 B_Memory LOneK1K
ENSG00000139343 SNRPF 506665 sc-eQTL 4.68e-01 0.07 0.0962 0.848 B_Memory LOneK1K
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.15e-01 -0.199 0.126 0.848 B_Memory LOneK1K
ENSG00000059758 CDK17 -34887 sc-eQTL 3.21e-01 -0.0713 0.0717 0.848 B_Naive LOneK1K
ENSG00000111142 METAP2 892073 sc-eQTL 5.28e-01 -0.0615 0.0973 0.848 B_Naive LOneK1K
ENSG00000111144 LTA4H 322073 sc-eQTL 7.51e-02 0.143 0.0801 0.848 B_Naive LOneK1K
ENSG00000111145 ELK3 171218 sc-eQTL 8.64e-02 -0.157 0.0913 0.848 B_Naive LOneK1K
ENSG00000136014 USP44 814117 sc-eQTL 9.30e-01 -0.00989 0.112 0.848 B_Naive LOneK1K
ENSG00000139343 SNRPF 506665 sc-eQTL 7.29e-01 0.0321 0.0925 0.848 B_Naive LOneK1K
ENSG00000139350 NEDD1 -541630 sc-eQTL 1.47e-01 0.177 0.122 0.848 B_Naive LOneK1K
ENSG00000059758 CDK17 -34887 sc-eQTL 1.78e-03 -0.262 0.0828 0.848 CD14_Mono LOneK1K
ENSG00000084110 HAL 369228 sc-eQTL 3.10e-01 0.104 0.102 0.848 CD14_Mono LOneK1K
ENSG00000111142 METAP2 892073 sc-eQTL 1.31e-01 0.146 0.0961 0.848 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 322073 sc-eQTL 1.86e-01 0.149 0.112 0.848 CD14_Mono LOneK1K
ENSG00000111145 ELK3 171218 sc-eQTL 3.65e-02 -0.17 0.0805 0.848 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 506665 sc-eQTL 9.47e-01 -0.00519 0.0785 0.848 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -541630 sc-eQTL 6.54e-01 -0.0552 0.123 0.848 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 340270 sc-eQTL 2.12e-02 0.262 0.113 0.848 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -34887 sc-eQTL 3.41e-01 -0.0834 0.0874 0.851 CD16_Mono LOneK1K
ENSG00000084110 HAL 369228 sc-eQTL 2.24e-01 0.126 0.103 0.851 CD16_Mono LOneK1K
ENSG00000111142 METAP2 892073 sc-eQTL 1.57e-01 0.166 0.117 0.851 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 322073 sc-eQTL 1.00e-01 0.188 0.114 0.851 CD16_Mono LOneK1K
ENSG00000111145 ELK3 171218 sc-eQTL 9.01e-02 -0.144 0.0844 0.851 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 506665 sc-eQTL 6.82e-01 0.0359 0.0876 0.851 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -541630 sc-eQTL 9.24e-01 -0.0107 0.112 0.851 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 340270 sc-eQTL 3.90e-01 0.102 0.119 0.851 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -34887 sc-eQTL 1.88e-01 -0.0801 0.0607 0.849 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 892073 sc-eQTL 4.20e-01 0.0748 0.0926 0.849 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 322073 sc-eQTL 2.81e-02 -0.232 0.105 0.849 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 171218 sc-eQTL 3.05e-01 -0.0994 0.0968 0.849 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 506665 sc-eQTL 8.04e-01 -0.0206 0.083 0.849 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -541630 sc-eQTL 2.45e-01 -0.12 0.103 0.849 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111145 ELK3 171218 eQTL 0.00193 -0.0767 0.0246 0.0 0.0 0.132

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188596 \N -123982 4.46e-06 6.21e-06 5.11e-07 4.27e-06 8.67e-07 1.53e-06 4.27e-06 9.98e-07 4.96e-06 1.7e-06 5.21e-06 3.43e-06 8.17e-06 2.33e-06 1.35e-06 2.23e-06 2.09e-06 2.83e-06 1.39e-06 1.19e-06 1.8e-06 4.53e-06 4.04e-06 1.85e-06 5.75e-06 1.19e-06 2.25e-06 1.73e-06 4.26e-06 4.12e-06 2.7e-06 4.14e-07 4.67e-07 1.84e-06 1.95e-06 9.59e-07 1.08e-06 4.24e-07 8.39e-07 5.94e-07 2.08e-07 5.64e-06 3.82e-07 1.64e-07 3.27e-07 5.86e-07 8.69e-07 2.26e-07 2.69e-07