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Genes within 1Mb (chr12:96291444:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -109036 sc-eQTL 8.56e-01 0.0087 0.0477 0.645 B L1
ENSG00000111142 METAP2 817924 sc-eQTL 7.79e-01 -0.019 0.0675 0.645 B L1
ENSG00000111144 LTA4H 247924 sc-eQTL 9.05e-01 0.00712 0.0593 0.645 B L1
ENSG00000111145 ELK3 97069 sc-eQTL 1.17e-01 -0.0989 0.0627 0.645 B L1
ENSG00000136014 USP44 739968 sc-eQTL 9.18e-01 -0.00806 0.0778 0.645 B L1
ENSG00000139343 SNRPF 432516 sc-eQTL 5.76e-01 0.0321 0.0573 0.645 B L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.60e-01 -0.0255 0.0837 0.645 B L1
ENSG00000059758 CDK17 -109036 sc-eQTL 9.15e-01 -0.0042 0.0392 0.645 CD4T L1
ENSG00000111142 METAP2 817924 sc-eQTL 6.66e-01 0.0236 0.0547 0.645 CD4T L1
ENSG00000111144 LTA4H 247924 sc-eQTL 2.27e-02 -0.122 0.0532 0.645 CD4T L1
ENSG00000111145 ELK3 97069 sc-eQTL 3.13e-01 -0.0589 0.0582 0.645 CD4T L1
ENSG00000136014 USP44 739968 sc-eQTL 7.79e-01 -0.0233 0.0832 0.645 CD4T L1
ENSG00000139343 SNRPF 432516 sc-eQTL 6.45e-01 -0.0235 0.0509 0.645 CD4T L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 9.17e-01 0.00655 0.0628 0.645 CD4T L1
ENSG00000059758 CDK17 -109036 sc-eQTL 9.72e-01 -0.00144 0.0403 0.645 CD8T L1
ENSG00000111142 METAP2 817924 sc-eQTL 8.08e-01 0.0158 0.0651 0.645 CD8T L1
ENSG00000111144 LTA4H 247924 sc-eQTL 4.07e-01 -0.0359 0.0432 0.645 CD8T L1
ENSG00000111145 ELK3 97069 sc-eQTL 4.64e-01 -0.0477 0.0651 0.645 CD8T L1
ENSG00000136014 USP44 739968 sc-eQTL 9.13e-01 -0.00812 0.0741 0.645 CD8T L1
ENSG00000139343 SNRPF 432516 sc-eQTL 5.15e-01 0.0348 0.0533 0.645 CD8T L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 8.41e-02 -0.122 0.0705 0.645 CD8T L1
ENSG00000059758 CDK17 -109036 sc-eQTL 9.37e-01 -0.00582 0.0737 0.64 DC L1
ENSG00000084110 HAL 295079 sc-eQTL 3.09e-01 0.0853 0.0837 0.64 DC L1
ENSG00000111142 METAP2 817924 sc-eQTL 9.20e-01 0.00932 0.0925 0.64 DC L1
ENSG00000111144 LTA4H 247924 sc-eQTL 8.97e-01 0.00889 0.0686 0.64 DC L1
ENSG00000111145 ELK3 97069 sc-eQTL 3.62e-01 0.0766 0.0839 0.64 DC L1
ENSG00000139343 SNRPF 432516 sc-eQTL 8.36e-01 0.0145 0.0699 0.64 DC L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 5.88e-01 0.0486 0.0897 0.64 DC L1
ENSG00000257715 AC007298.1 266121 sc-eQTL 4.47e-01 -0.0617 0.0809 0.64 DC L1
ENSG00000059758 CDK17 -109036 sc-eQTL 7.92e-02 -0.109 0.0615 0.645 Mono L1
ENSG00000084110 HAL 295079 sc-eQTL 1.02e-01 0.128 0.0776 0.645 Mono L1
ENSG00000111142 METAP2 817924 sc-eQTL 4.24e-01 0.0539 0.0674 0.645 Mono L1
ENSG00000111144 LTA4H 247924 sc-eQTL 7.28e-01 -0.0307 0.0882 0.645 Mono L1
ENSG00000111145 ELK3 97069 sc-eQTL 7.86e-01 -0.0161 0.0592 0.645 Mono L1
ENSG00000139343 SNRPF 432516 sc-eQTL 2.21e-01 -0.0683 0.0556 0.645 Mono L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 3.51e-01 -0.08 0.0856 0.645 Mono L1
ENSG00000257715 AC007298.1 266121 sc-eQTL 7.74e-01 0.0238 0.0831 0.645 Mono L1
ENSG00000059758 CDK17 -109036 sc-eQTL 8.66e-02 0.076 0.0441 0.646 NK L1
ENSG00000111142 METAP2 817924 sc-eQTL 8.78e-01 -0.0102 0.0658 0.646 NK L1
ENSG00000111144 LTA4H 247924 sc-eQTL 8.35e-01 -0.0157 0.0754 0.646 NK L1
ENSG00000111145 ELK3 97069 sc-eQTL 3.69e-01 0.0643 0.0714 0.646 NK L1
ENSG00000139343 SNRPF 432516 sc-eQTL 3.89e-01 -0.0511 0.0592 0.646 NK L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 2.76e-02 -0.165 0.0743 0.646 NK L1
ENSG00000059758 CDK17 -109036 sc-eQTL 1.97e-01 -0.048 0.0371 0.645 Other_T L1
ENSG00000074527 NTN4 500292 sc-eQTL 6.74e-01 -0.029 0.0688 0.645 Other_T L1
ENSG00000111142 METAP2 817924 sc-eQTL 3.08e-01 0.0726 0.0709 0.645 Other_T L1
ENSG00000111144 LTA4H 247924 sc-eQTL 5.43e-01 -0.0474 0.0778 0.645 Other_T L1
ENSG00000111145 ELK3 97069 sc-eQTL 8.96e-01 -0.00793 0.0607 0.645 Other_T L1
ENSG00000139343 SNRPF 432516 sc-eQTL 6.00e-01 0.0296 0.0564 0.645 Other_T L1
ENSG00000139350 NEDD1 -615779 sc-eQTL 9.30e-01 -0.00756 0.086 0.645 Other_T L1
ENSG00000188596 CFAP54 -198127 sc-eQTL 9.72e-01 0.00317 0.089 0.645 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -109036 sc-eQTL 7.14e-01 0.0314 0.0857 0.645 B_Activated L2
ENSG00000111142 METAP2 817924 sc-eQTL 3.74e-02 0.224 0.107 0.645 B_Activated L2
ENSG00000111144 LTA4H 247924 sc-eQTL 8.64e-01 0.0166 0.0971 0.645 B_Activated L2
ENSG00000111145 ELK3 97069 sc-eQTL 5.56e-01 0.0606 0.103 0.645 B_Activated L2
ENSG00000136014 USP44 739968 sc-eQTL 6.61e-01 -0.0346 0.0789 0.645 B_Activated L2
ENSG00000139343 SNRPF 432516 sc-eQTL 8.82e-01 0.0144 0.0969 0.645 B_Activated L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 5.68e-01 -0.0579 0.101 0.645 B_Activated L2
ENSG00000059758 CDK17 -109036 sc-eQTL 9.00e-01 -0.00916 0.073 0.644 B_Intermediate L2
ENSG00000111142 METAP2 817924 sc-eQTL 4.46e-01 -0.0638 0.0836 0.644 B_Intermediate L2
ENSG00000111144 LTA4H 247924 sc-eQTL 8.28e-01 -0.0154 0.0707 0.644 B_Intermediate L2
ENSG00000111145 ELK3 97069 sc-eQTL 1.15e-01 -0.125 0.0793 0.644 B_Intermediate L2
ENSG00000136014 USP44 739968 sc-eQTL 4.36e-01 -0.0733 0.0938 0.644 B_Intermediate L2
ENSG00000139343 SNRPF 432516 sc-eQTL 9.72e-01 -0.00277 0.0794 0.644 B_Intermediate L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 2.71e-01 -0.102 0.0927 0.644 B_Intermediate L2
ENSG00000059758 CDK17 -109036 sc-eQTL 7.25e-01 0.0252 0.0715 0.642 B_Memory L2
ENSG00000111142 METAP2 817924 sc-eQTL 3.61e-01 0.085 0.0928 0.642 B_Memory L2
ENSG00000111144 LTA4H 247924 sc-eQTL 9.84e-01 -0.00162 0.0826 0.642 B_Memory L2
ENSG00000111145 ELK3 97069 sc-eQTL 3.38e-01 -0.0779 0.081 0.642 B_Memory L2
ENSG00000136014 USP44 739968 sc-eQTL 5.83e-01 0.049 0.089 0.642 B_Memory L2
ENSG00000139343 SNRPF 432516 sc-eQTL 1.23e-01 0.132 0.0856 0.642 B_Memory L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 1.33e-01 -0.143 0.0947 0.642 B_Memory L2
ENSG00000059758 CDK17 -109036 sc-eQTL 2.00e-01 -0.0764 0.0594 0.645 B_Naive1 L2
ENSG00000111142 METAP2 817924 sc-eQTL 9.04e-01 -0.0093 0.0772 0.645 B_Naive1 L2
ENSG00000111144 LTA4H 247924 sc-eQTL 6.95e-01 -0.0245 0.0624 0.645 B_Naive1 L2
ENSG00000111145 ELK3 97069 sc-eQTL 6.01e-01 -0.0386 0.0738 0.645 B_Naive1 L2
ENSG00000136014 USP44 739968 sc-eQTL 9.50e-01 0.00578 0.0928 0.645 B_Naive1 L2
ENSG00000139343 SNRPF 432516 sc-eQTL 3.91e-01 0.0616 0.0717 0.645 B_Naive1 L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.00e-01 -0.0356 0.0921 0.645 B_Naive1 L2
ENSG00000059758 CDK17 -109036 sc-eQTL 8.21e-01 0.0168 0.0741 0.644 B_Naive2 L2
ENSG00000111142 METAP2 817924 sc-eQTL 8.01e-01 0.0225 0.0894 0.644 B_Naive2 L2
ENSG00000111144 LTA4H 247924 sc-eQTL 7.44e-01 -0.0229 0.0702 0.644 B_Naive2 L2
ENSG00000111145 ELK3 97069 sc-eQTL 3.70e-01 -0.0743 0.0826 0.644 B_Naive2 L2
ENSG00000136014 USP44 739968 sc-eQTL 3.18e-01 -0.0894 0.0892 0.644 B_Naive2 L2
ENSG00000139343 SNRPF 432516 sc-eQTL 6.59e-02 0.151 0.0815 0.644 B_Naive2 L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 1.99e-01 0.125 0.0973 0.644 B_Naive2 L2
ENSG00000059758 CDK17 -109036 sc-eQTL 7.41e-01 -0.0228 0.0689 0.639 CD4_CTL L2
ENSG00000111142 METAP2 817924 sc-eQTL 2.41e-01 0.116 0.0982 0.639 CD4_CTL L2
ENSG00000111144 LTA4H 247924 sc-eQTL 1.03e-01 -0.158 0.0965 0.639 CD4_CTL L2
ENSG00000111145 ELK3 97069 sc-eQTL 7.01e-01 0.0377 0.0983 0.639 CD4_CTL L2
ENSG00000136014 USP44 739968 sc-eQTL 4.87e-01 0.0546 0.0784 0.639 CD4_CTL L2
ENSG00000139343 SNRPF 432516 sc-eQTL 6.36e-01 -0.0404 0.0854 0.639 CD4_CTL L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 1.35e-01 -0.147 0.0983 0.639 CD4_CTL L2
ENSG00000059758 CDK17 -109036 sc-eQTL 4.60e-01 0.032 0.0432 0.645 CD4_Naive L2
ENSG00000111142 METAP2 817924 sc-eQTL 3.16e-01 0.0625 0.0622 0.645 CD4_Naive L2
ENSG00000111144 LTA4H 247924 sc-eQTL 6.99e-03 -0.167 0.0615 0.645 CD4_Naive L2
ENSG00000111145 ELK3 97069 sc-eQTL 5.15e-01 -0.0407 0.0625 0.645 CD4_Naive L2
ENSG00000136014 USP44 739968 sc-eQTL 7.67e-01 -0.026 0.0877 0.645 CD4_Naive L2
ENSG00000139343 SNRPF 432516 sc-eQTL 7.93e-01 -0.0146 0.0556 0.645 CD4_Naive L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 4.42e-01 -0.0527 0.0684 0.645 CD4_Naive L2
ENSG00000059758 CDK17 -109036 sc-eQTL 2.83e-01 -0.0453 0.0421 0.645 CD4_TCM L2
ENSG00000111142 METAP2 817924 sc-eQTL 3.43e-01 -0.0682 0.0717 0.645 CD4_TCM L2
ENSG00000111144 LTA4H 247924 sc-eQTL 8.19e-01 0.0164 0.0715 0.645 CD4_TCM L2
ENSG00000111145 ELK3 97069 sc-eQTL 4.85e-01 -0.0492 0.0703 0.645 CD4_TCM L2
ENSG00000136014 USP44 739968 sc-eQTL 8.26e-01 -0.0214 0.0973 0.645 CD4_TCM L2
ENSG00000139343 SNRPF 432516 sc-eQTL 9.98e-01 0.000136 0.0577 0.645 CD4_TCM L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 2.96e-01 0.0824 0.0787 0.645 CD4_TCM L2
ENSG00000059758 CDK17 -109036 sc-eQTL 2.32e-01 0.0616 0.0514 0.645 CD4_TEM L2
ENSG00000111142 METAP2 817924 sc-eQTL 6.14e-01 0.0435 0.0861 0.645 CD4_TEM L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.21e-01 -0.0512 0.0795 0.645 CD4_TEM L2
ENSG00000111145 ELK3 97069 sc-eQTL 4.96e-01 -0.0504 0.0739 0.645 CD4_TEM L2
ENSG00000136014 USP44 739968 sc-eQTL 7.64e-01 -0.0273 0.091 0.645 CD4_TEM L2
ENSG00000139343 SNRPF 432516 sc-eQTL 1.95e-01 -0.1 0.0771 0.645 CD4_TEM L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.39e-01 0.0306 0.0918 0.645 CD4_TEM L2
ENSG00000059758 CDK17 -109036 sc-eQTL 5.31e-01 0.0319 0.0508 0.645 CD8_CTL L2
ENSG00000111142 METAP2 817924 sc-eQTL 5.26e-01 -0.0558 0.0878 0.645 CD8_CTL L2
ENSG00000111144 LTA4H 247924 sc-eQTL 9.53e-01 0.00539 0.0918 0.645 CD8_CTL L2
ENSG00000111145 ELK3 97069 sc-eQTL 2.97e-01 0.0873 0.0834 0.645 CD8_CTL L2
ENSG00000136014 USP44 739968 sc-eQTL 5.96e-01 0.0494 0.0931 0.645 CD8_CTL L2
ENSG00000139343 SNRPF 432516 sc-eQTL 9.10e-01 -0.0087 0.0768 0.645 CD8_CTL L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 9.46e-01 0.0059 0.0862 0.645 CD8_CTL L2
ENSG00000059758 CDK17 -109036 sc-eQTL 7.86e-01 -0.0163 0.06 0.645 CD8_Naive L2
ENSG00000111142 METAP2 817924 sc-eQTL 2.19e-01 0.0981 0.0795 0.645 CD8_Naive L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.21e-01 0.0462 0.0718 0.645 CD8_Naive L2
ENSG00000111145 ELK3 97069 sc-eQTL 8.77e-01 0.0118 0.0761 0.645 CD8_Naive L2
ENSG00000136014 USP44 739968 sc-eQTL 3.89e-01 -0.0689 0.0797 0.645 CD8_Naive L2
ENSG00000139343 SNRPF 432516 sc-eQTL 8.55e-01 -0.0125 0.0684 0.645 CD8_Naive L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 6.52e-02 -0.15 0.0808 0.645 CD8_Naive L2
ENSG00000059758 CDK17 -109036 sc-eQTL 3.65e-01 0.061 0.0672 0.639 CD8_TCM L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.86e-01 -0.0273 0.1 0.639 CD8_TCM L2
ENSG00000111144 LTA4H 247924 sc-eQTL 6.86e-01 -0.04 0.0989 0.639 CD8_TCM L2
ENSG00000111145 ELK3 97069 sc-eQTL 4.75e-01 -0.06 0.0837 0.639 CD8_TCM L2
ENSG00000136014 USP44 739968 sc-eQTL 5.76e-01 0.0508 0.0907 0.639 CD8_TCM L2
ENSG00000139343 SNRPF 432516 sc-eQTL 7.48e-01 0.0311 0.0965 0.639 CD8_TCM L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 4.92e-01 -0.0649 0.0944 0.639 CD8_TCM L2
ENSG00000059758 CDK17 -109036 sc-eQTL 4.14e-01 0.0663 0.081 0.655 CD8_TEM L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.33e-01 0.0326 0.0952 0.655 CD8_TEM L2
ENSG00000111144 LTA4H 247924 sc-eQTL 6.19e-01 -0.0495 0.0993 0.655 CD8_TEM L2
ENSG00000111145 ELK3 97069 sc-eQTL 1.69e-01 -0.134 0.0972 0.655 CD8_TEM L2
ENSG00000136014 USP44 739968 sc-eQTL 1.54e-01 0.118 0.0827 0.655 CD8_TEM L2
ENSG00000139343 SNRPF 432516 sc-eQTL 9.35e-01 0.00746 0.0908 0.655 CD8_TEM L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 8.30e-02 -0.17 0.0978 0.655 CD8_TEM L2
ENSG00000059758 CDK17 -109036 sc-eQTL 1.81e-02 -0.129 0.0543 0.647 MAIT L2
ENSG00000074527 NTN4 500292 sc-eQTL 9.17e-01 -0.00774 0.0741 0.647 MAIT L2
ENSG00000111142 METAP2 817924 sc-eQTL 1.53e-01 0.133 0.0929 0.647 MAIT L2
ENSG00000111144 LTA4H 247924 sc-eQTL 9.62e-01 0.00409 0.085 0.647 MAIT L2
ENSG00000111145 ELK3 97069 sc-eQTL 6.56e-01 -0.0318 0.0713 0.647 MAIT L2
ENSG00000139343 SNRPF 432516 sc-eQTL 9.89e-01 -0.00112 0.0826 0.647 MAIT L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 5.09e-01 -0.0613 0.0927 0.647 MAIT L2
ENSG00000188596 CFAP54 -198127 sc-eQTL 6.97e-01 0.0358 0.0919 0.647 MAIT L2
ENSG00000059758 CDK17 -109036 sc-eQTL 5.98e-01 0.0298 0.0564 0.647 NK_CD56bright L2
ENSG00000111142 METAP2 817924 sc-eQTL 5.09e-01 0.0629 0.0952 0.647 NK_CD56bright L2
ENSG00000111144 LTA4H 247924 sc-eQTL 8.80e-01 -0.0127 0.0835 0.647 NK_CD56bright L2
ENSG00000111145 ELK3 97069 sc-eQTL 9.44e-01 0.00622 0.0886 0.647 NK_CD56bright L2
ENSG00000139343 SNRPF 432516 sc-eQTL 6.89e-01 -0.0371 0.0926 0.647 NK_CD56bright L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 6.46e-01 -0.043 0.0935 0.647 NK_CD56bright L2
ENSG00000059758 CDK17 -109036 sc-eQTL 3.05e-02 0.105 0.0482 0.647 NK_CD56dim L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.51e-01 -0.0271 0.0853 0.647 NK_CD56dim L2
ENSG00000111144 LTA4H 247924 sc-eQTL 4.54e-01 -0.066 0.0879 0.647 NK_CD56dim L2
ENSG00000111145 ELK3 97069 sc-eQTL 5.12e-01 -0.0511 0.0778 0.647 NK_CD56dim L2
ENSG00000139343 SNRPF 432516 sc-eQTL 2.66e-01 -0.0825 0.0739 0.647 NK_CD56dim L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 5.36e-02 -0.164 0.0846 0.647 NK_CD56dim L2
ENSG00000059758 CDK17 -109036 sc-eQTL 5.61e-01 -0.0436 0.0749 0.648 NK_HLA L2
ENSG00000111142 METAP2 817924 sc-eQTL 2.40e-01 0.111 0.0941 0.648 NK_HLA L2
ENSG00000111144 LTA4H 247924 sc-eQTL 1.20e-01 -0.153 0.0977 0.648 NK_HLA L2
ENSG00000111145 ELK3 97069 sc-eQTL 2.63e-01 0.102 0.0909 0.648 NK_HLA L2
ENSG00000139343 SNRPF 432516 sc-eQTL 7.62e-01 0.0289 0.095 0.648 NK_HLA L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.09e-01 -0.0336 0.0899 0.648 NK_HLA L2
ENSG00000059758 CDK17 -109036 sc-eQTL 5.24e-01 0.0339 0.0531 0.647 NK_cytokine L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.23e-01 0.0314 0.0883 0.647 NK_cytokine L2
ENSG00000111144 LTA4H 247924 sc-eQTL 6.56e-01 0.0401 0.0899 0.647 NK_cytokine L2
ENSG00000111145 ELK3 97069 sc-eQTL 3.39e-01 0.0824 0.0859 0.647 NK_cytokine L2
ENSG00000139343 SNRPF 432516 sc-eQTL 3.38e-01 -0.0699 0.0728 0.647 NK_cytokine L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 4.94e-02 -0.177 0.0893 0.647 NK_cytokine L2
ENSG00000059758 CDK17 -109036 sc-eQTL 1.92e-01 0.125 0.0951 0.644 PB L2
ENSG00000111142 METAP2 817924 sc-eQTL 5.15e-01 0.0731 0.112 0.644 PB L2
ENSG00000111144 LTA4H 247924 sc-eQTL 3.10e-01 -0.0859 0.0841 0.644 PB L2
ENSG00000111145 ELK3 97069 sc-eQTL 7.15e-01 0.0396 0.108 0.644 PB L2
ENSG00000136014 USP44 739968 sc-eQTL 1.60e-01 -0.141 0.0994 0.644 PB L2
ENSG00000139343 SNRPF 432516 sc-eQTL 4.57e-01 -0.0787 0.105 0.644 PB L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.16e-01 0.0458 0.126 0.644 PB L2
ENSG00000059758 CDK17 -109036 sc-eQTL 7.08e-01 -0.0225 0.0598 0.643 Pro_T L2
ENSG00000074527 NTN4 500292 sc-eQTL 7.74e-01 0.0193 0.0672 0.643 Pro_T L2
ENSG00000111142 METAP2 817924 sc-eQTL 6.39e-01 0.0373 0.0793 0.643 Pro_T L2
ENSG00000111144 LTA4H 247924 sc-eQTL 1.82e-01 -0.105 0.0787 0.643 Pro_T L2
ENSG00000111145 ELK3 97069 sc-eQTL 2.51e-01 -0.11 0.0953 0.643 Pro_T L2
ENSG00000139343 SNRPF 432516 sc-eQTL 8.40e-01 0.0122 0.0602 0.643 Pro_T L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 9.82e-01 0.00203 0.0875 0.643 Pro_T L2
ENSG00000188596 CFAP54 -198127 sc-eQTL 3.34e-01 -0.0683 0.0706 0.643 Pro_T L2
ENSG00000059758 CDK17 -109036 sc-eQTL 2.73e-01 -0.0717 0.0651 0.645 Treg L2
ENSG00000111142 METAP2 817924 sc-eQTL 9.90e-01 -0.00116 0.0889 0.645 Treg L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.93e-01 -0.0443 0.0827 0.645 Treg L2
ENSG00000111145 ELK3 97069 sc-eQTL 4.16e-01 -0.061 0.0749 0.645 Treg L2
ENSG00000136014 USP44 739968 sc-eQTL 2.20e-01 0.103 0.0839 0.645 Treg L2
ENSG00000139343 SNRPF 432516 sc-eQTL 5.08e-02 0.169 0.086 0.645 Treg L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 9.41e-01 0.00716 0.0969 0.645 Treg L2
ENSG00000059758 CDK17 -109036 sc-eQTL 9.37e-01 0.00622 0.0784 0.629 cDC L2
ENSG00000084110 HAL 295079 sc-eQTL 8.37e-01 -0.0168 0.0815 0.629 cDC L2
ENSG00000111142 METAP2 817924 sc-eQTL 6.52e-01 0.0444 0.0983 0.629 cDC L2
ENSG00000111144 LTA4H 247924 sc-eQTL 2.47e-01 0.0808 0.0696 0.629 cDC L2
ENSG00000111145 ELK3 97069 sc-eQTL 3.16e-01 0.0924 0.0919 0.629 cDC L2
ENSG00000139343 SNRPF 432516 sc-eQTL 5.37e-01 -0.0477 0.0771 0.629 cDC L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 8.34e-01 -0.0197 0.094 0.629 cDC L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 9.59e-01 -0.00409 0.0793 0.629 cDC L2
ENSG00000059758 CDK17 -109036 sc-eQTL 1.66e-03 -0.219 0.0686 0.645 cMono_IL1B L2
ENSG00000084110 HAL 295079 sc-eQTL 2.43e-01 0.0895 0.0764 0.645 cMono_IL1B L2
ENSG00000111142 METAP2 817924 sc-eQTL 3.44e-01 0.0752 0.0793 0.645 cMono_IL1B L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.11e-01 -0.0544 0.0827 0.645 cMono_IL1B L2
ENSG00000111145 ELK3 97069 sc-eQTL 4.39e-01 -0.0494 0.0637 0.645 cMono_IL1B L2
ENSG00000139343 SNRPF 432516 sc-eQTL 5.39e-01 0.0404 0.0657 0.645 cMono_IL1B L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 8.27e-01 -0.0199 0.0906 0.645 cMono_IL1B L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 2.10e-01 0.106 0.0842 0.645 cMono_IL1B L2
ENSG00000059758 CDK17 -109036 sc-eQTL 2.28e-01 -0.0951 0.0787 0.645 cMono_S100A L2
ENSG00000084110 HAL 295079 sc-eQTL 1.70e-01 0.122 0.0883 0.645 cMono_S100A L2
ENSG00000111142 METAP2 817924 sc-eQTL 9.38e-02 0.15 0.0891 0.645 cMono_S100A L2
ENSG00000111144 LTA4H 247924 sc-eQTL 4.98e-01 -0.06 0.0885 0.645 cMono_S100A L2
ENSG00000111145 ELK3 97069 sc-eQTL 5.18e-01 0.0467 0.0721 0.645 cMono_S100A L2
ENSG00000139343 SNRPF 432516 sc-eQTL 3.22e-02 -0.152 0.0705 0.645 cMono_S100A L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 2.09e-01 -0.121 0.0959 0.645 cMono_S100A L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 6.74e-01 -0.0381 0.0906 0.645 cMono_S100A L2
ENSG00000059758 CDK17 -109036 sc-eQTL 8.07e-01 0.0185 0.0758 0.645 gdT L2
ENSG00000074527 NTN4 500292 sc-eQTL 6.43e-01 -0.0404 0.0869 0.645 gdT L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.83e-01 -0.03 0.109 0.645 gdT L2
ENSG00000111144 LTA4H 247924 sc-eQTL 2.71e-01 0.125 0.113 0.645 gdT L2
ENSG00000111145 ELK3 97069 sc-eQTL 2.34e-01 0.125 0.104 0.645 gdT L2
ENSG00000139343 SNRPF 432516 sc-eQTL 2.69e-02 0.222 0.0995 0.645 gdT L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 2.67e-01 -0.124 0.111 0.645 gdT L2
ENSG00000188596 CFAP54 -198127 sc-eQTL 6.83e-01 0.04 0.0979 0.645 gdT L2
ENSG00000059758 CDK17 -109036 sc-eQTL 9.17e-01 0.00927 0.089 0.64 intMono L2
ENSG00000084110 HAL 295079 sc-eQTL 3.90e-01 0.0773 0.0898 0.64 intMono L2
ENSG00000111142 METAP2 817924 sc-eQTL 7.75e-01 -0.0292 0.102 0.64 intMono L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.00e-01 0.0624 0.0922 0.64 intMono L2
ENSG00000111145 ELK3 97069 sc-eQTL 7.07e-01 -0.031 0.0822 0.64 intMono L2
ENSG00000139343 SNRPF 432516 sc-eQTL 6.12e-02 -0.164 0.0871 0.64 intMono L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 8.60e-01 -0.0161 0.0913 0.64 intMono L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 3.95e-01 0.0782 0.0917 0.64 intMono L2
ENSG00000059758 CDK17 -109036 sc-eQTL 3.37e-01 0.0689 0.0716 0.643 ncMono L2
ENSG00000084110 HAL 295079 sc-eQTL 6.25e-01 -0.0392 0.08 0.643 ncMono L2
ENSG00000111142 METAP2 817924 sc-eQTL 8.44e-01 0.0191 0.0968 0.643 ncMono L2
ENSG00000111144 LTA4H 247924 sc-eQTL 7.16e-01 0.0325 0.0893 0.643 ncMono L2
ENSG00000111145 ELK3 97069 sc-eQTL 9.30e-01 -0.00678 0.0767 0.643 ncMono L2
ENSG00000139343 SNRPF 432516 sc-eQTL 8.41e-02 -0.135 0.0777 0.643 ncMono L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 7.92e-01 0.0219 0.0831 0.643 ncMono L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 6.38e-01 0.0446 0.0948 0.643 ncMono L2
ENSG00000059758 CDK17 -109036 sc-eQTL 9.73e-01 0.00315 0.0937 0.633 pDC L2
ENSG00000084110 HAL 295079 sc-eQTL 2.84e-03 0.233 0.0769 0.633 pDC L2
ENSG00000111142 METAP2 817924 sc-eQTL 6.95e-01 0.0419 0.107 0.633 pDC L2
ENSG00000111144 LTA4H 247924 sc-eQTL 5.56e-01 -0.0522 0.0885 0.633 pDC L2
ENSG00000111145 ELK3 97069 sc-eQTL 8.78e-01 0.0167 0.108 0.633 pDC L2
ENSG00000139343 SNRPF 432516 sc-eQTL 8.62e-01 0.0165 0.0945 0.633 pDC L2
ENSG00000139350 NEDD1 -615779 sc-eQTL 6.94e-02 0.189 0.103 0.633 pDC L2
ENSG00000257715 AC007298.1 266121 sc-eQTL 3.46e-01 0.0842 0.0892 0.633 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -109036 sc-eQTL 6.65e-01 0.0266 0.0614 0.645 B_Memory LOneK1K
ENSG00000111142 METAP2 817924 sc-eQTL 7.08e-01 0.032 0.0854 0.645 B_Memory LOneK1K
ENSG00000111144 LTA4H 247924 sc-eQTL 8.58e-01 0.0114 0.0638 0.645 B_Memory LOneK1K
ENSG00000111145 ELK3 97069 sc-eQTL 9.79e-02 -0.12 0.0724 0.645 B_Memory LOneK1K
ENSG00000136014 USP44 739968 sc-eQTL 9.59e-01 -0.0047 0.0908 0.645 B_Memory LOneK1K
ENSG00000139343 SNRPF 432516 sc-eQTL 2.53e-01 0.0806 0.0704 0.645 B_Memory LOneK1K
ENSG00000139350 NEDD1 -615779 sc-eQTL 4.62e-02 -0.184 0.0918 0.645 B_Memory LOneK1K
ENSG00000059758 CDK17 -109036 sc-eQTL 1.71e-01 -0.0732 0.0533 0.645 B_Naive LOneK1K
ENSG00000111142 METAP2 817924 sc-eQTL 9.79e-01 -0.00192 0.0725 0.645 B_Naive LOneK1K
ENSG00000111144 LTA4H 247924 sc-eQTL 8.69e-01 0.00995 0.0601 0.645 B_Naive LOneK1K
ENSG00000111145 ELK3 97069 sc-eQTL 9.72e-02 -0.113 0.068 0.645 B_Naive LOneK1K
ENSG00000136014 USP44 739968 sc-eQTL 8.05e-01 0.0206 0.0836 0.645 B_Naive LOneK1K
ENSG00000139343 SNRPF 432516 sc-eQTL 2.43e-01 0.0804 0.0687 0.645 B_Naive LOneK1K
ENSG00000139350 NEDD1 -615779 sc-eQTL 4.28e-01 0.0723 0.091 0.645 B_Naive LOneK1K
ENSG00000059758 CDK17 -109036 sc-eQTL 2.85e-03 -0.19 0.0629 0.645 CD14_Mono LOneK1K
ENSG00000084110 HAL 295079 sc-eQTL 2.61e-01 0.0875 0.0776 0.645 CD14_Mono LOneK1K
ENSG00000111142 METAP2 817924 sc-eQTL 1.65e-01 0.102 0.0729 0.645 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 247924 sc-eQTL 8.90e-01 -0.0118 0.0854 0.645 CD14_Mono LOneK1K
ENSG00000111145 ELK3 97069 sc-eQTL 6.94e-01 -0.0243 0.0617 0.645 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 432516 sc-eQTL 4.66e-01 -0.0434 0.0595 0.645 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -615779 sc-eQTL 3.19e-01 -0.0931 0.0932 0.645 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 266121 sc-eQTL 5.14e-01 0.0565 0.0864 0.645 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -109036 sc-eQTL 6.89e-01 0.026 0.0649 0.647 CD16_Mono LOneK1K
ENSG00000084110 HAL 295079 sc-eQTL 7.56e-01 0.0239 0.0767 0.647 CD16_Mono LOneK1K
ENSG00000111142 METAP2 817924 sc-eQTL 8.51e-01 0.0163 0.087 0.647 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 247924 sc-eQTL 9.41e-01 0.00634 0.0851 0.647 CD16_Mono LOneK1K
ENSG00000111145 ELK3 97069 sc-eQTL 3.00e-01 -0.0652 0.0628 0.647 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 432516 sc-eQTL 1.76e-01 -0.0878 0.0646 0.647 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -615779 sc-eQTL 6.01e-01 -0.0435 0.0832 0.647 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 266121 sc-eQTL 8.40e-01 0.0178 0.0881 0.647 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -109036 sc-eQTL 1.77e-01 0.0614 0.0453 0.647 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 817924 sc-eQTL 9.58e-01 -0.00364 0.0692 0.647 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 247924 sc-eQTL 9.67e-01 -0.00327 0.0791 0.647 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 97069 sc-eQTL 6.99e-01 0.0281 0.0724 0.647 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 432516 sc-eQTL 2.11e-01 -0.0775 0.0617 0.647 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -615779 sc-eQTL 3.26e-02 -0.164 0.0764 0.647 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111144 LTA4H 247924 eQTL 0.0277 -0.0468 0.0212 0.0 0.0 0.343
ENSG00000111145 ELK3 97069 eQTL 5.02e-07 -0.0899 0.0178 0.0 0.0 0.343

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 97069 2.89e-05 2.7e-05 4.54e-06 1.27e-05 3.55e-06 1.09e-05 3.06e-05 3.46e-06 2.17e-05 1.04e-05 2.91e-05 1.16e-05 3.65e-05 1.03e-05 5.59e-06 1.24e-05 1.22e-05 1.78e-05 6.02e-06 5.17e-06 1.01e-05 2.42e-05 2.39e-05 5.78e-06 3.6e-05 5.99e-06 9.55e-06 8.88e-06 2.39e-05 1.77e-05 1.45e-05 1.58e-06 1.67e-06 5.21e-06 9.06e-06 4.06e-06 2.24e-06 2.71e-06 3.48e-06 2.38e-06 1.46e-06 3.18e-05 3.21e-06 2.69e-07 1.95e-06 2.97e-06 3.35e-06 1.38e-06 1.15e-06
ENSG00000188596 \N -198131 1.11e-05 9.91e-06 2.44e-06 4.49e-06 2.35e-06 5.12e-06 1.03e-05 1.43e-06 9.72e-06 5.14e-06 1.11e-05 5.59e-06 1.38e-05 3.63e-06 3.8e-06 6.47e-06 4.13e-06 6.9e-06 2.98e-06 2.77e-06 5.87e-06 9.62e-06 8.25e-06 2.83e-06 1.48e-05 3.73e-06 4.84e-06 3.74e-06 1.08e-05 7.87e-06 5.51e-06 9.88e-07 7.05e-07 2.83e-06 3.56e-06 2.12e-06 1.43e-06 1.68e-06 1.62e-06 9.97e-07 7.14e-07 1.29e-05 2.64e-06 1.58e-07 7.6e-07 1.89e-06 1.47e-06 7.16e-07 4.78e-07