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Genes within 1Mb (chr12:96267832:TAAAAG:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -132648 sc-eQTL 9.28e-01 0.0043 0.0473 0.643 B L1
ENSG00000111142 METAP2 794312 sc-eQTL 8.73e-01 -0.0107 0.0669 0.643 B L1
ENSG00000111144 LTA4H 224312 sc-eQTL 9.13e-01 0.00642 0.0587 0.643 B L1
ENSG00000111145 ELK3 73457 sc-eQTL 1.29e-01 -0.0949 0.0622 0.643 B L1
ENSG00000136014 USP44 716356 sc-eQTL 9.97e-01 0.000279 0.0771 0.643 B L1
ENSG00000139343 SNRPF 408904 sc-eQTL 5.50e-01 0.034 0.0568 0.643 B L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 8.06e-01 -0.0204 0.0829 0.643 B L1
ENSG00000059758 CDK17 -132648 sc-eQTL 8.70e-01 -0.00636 0.0389 0.643 CD4T L1
ENSG00000111142 METAP2 794312 sc-eQTL 7.38e-01 0.0182 0.0542 0.643 CD4T L1
ENSG00000111144 LTA4H 224312 sc-eQTL 1.42e-02 -0.13 0.0526 0.643 CD4T L1
ENSG00000111145 ELK3 73457 sc-eQTL 2.21e-01 -0.0707 0.0576 0.643 CD4T L1
ENSG00000136014 USP44 716356 sc-eQTL 7.34e-01 -0.0281 0.0825 0.643 CD4T L1
ENSG00000139343 SNRPF 408904 sc-eQTL 7.48e-01 -0.0163 0.0505 0.643 CD4T L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 9.05e-01 0.00741 0.0622 0.643 CD4T L1
ENSG00000059758 CDK17 -132648 sc-eQTL 8.62e-01 -0.00696 0.04 0.643 CD8T L1
ENSG00000111142 METAP2 794312 sc-eQTL 7.43e-01 0.0211 0.0645 0.643 CD8T L1
ENSG00000111144 LTA4H 224312 sc-eQTL 4.17e-01 -0.0349 0.0428 0.643 CD8T L1
ENSG00000111145 ELK3 73457 sc-eQTL 5.73e-01 -0.0364 0.0645 0.643 CD8T L1
ENSG00000136014 USP44 716356 sc-eQTL 9.28e-01 -0.00661 0.0734 0.643 CD8T L1
ENSG00000139343 SNRPF 408904 sc-eQTL 4.02e-01 0.0443 0.0528 0.643 CD8T L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 8.07e-02 -0.123 0.0698 0.643 CD8T L1
ENSG00000059758 CDK17 -132648 sc-eQTL 9.07e-01 -0.00851 0.0731 0.637 DC L1
ENSG00000084110 HAL 271467 sc-eQTL 2.91e-01 0.0878 0.0829 0.637 DC L1
ENSG00000111142 METAP2 794312 sc-eQTL 8.51e-01 0.0172 0.0917 0.637 DC L1
ENSG00000111144 LTA4H 224312 sc-eQTL 9.21e-01 0.00674 0.068 0.637 DC L1
ENSG00000111145 ELK3 73457 sc-eQTL 3.14e-01 0.0838 0.0831 0.637 DC L1
ENSG00000139343 SNRPF 408904 sc-eQTL 7.91e-01 0.0184 0.0693 0.637 DC L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.11e-01 0.0585 0.0888 0.637 DC L1
ENSG00000257715 AC007298.1 242509 sc-eQTL 4.09e-01 -0.0663 0.0802 0.637 DC L1
ENSG00000059758 CDK17 -132648 sc-eQTL 5.92e-02 -0.115 0.0609 0.643 Mono L1
ENSG00000084110 HAL 271467 sc-eQTL 9.20e-02 0.13 0.0768 0.643 Mono L1
ENSG00000111142 METAP2 794312 sc-eQTL 4.01e-01 0.0562 0.0667 0.643 Mono L1
ENSG00000111144 LTA4H 224312 sc-eQTL 7.02e-01 -0.0334 0.0873 0.643 Mono L1
ENSG00000111145 ELK3 73457 sc-eQTL 9.08e-01 -0.00682 0.0586 0.643 Mono L1
ENSG00000139343 SNRPF 408904 sc-eQTL 2.91e-01 -0.0584 0.0551 0.643 Mono L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 3.39e-01 -0.0812 0.0847 0.643 Mono L1
ENSG00000257715 AC007298.1 242509 sc-eQTL 8.82e-01 0.0122 0.0823 0.643 Mono L1
ENSG00000059758 CDK17 -132648 sc-eQTL 1.17e-01 0.0688 0.0438 0.644 NK L1
ENSG00000111142 METAP2 794312 sc-eQTL 9.47e-01 -0.00432 0.0652 0.644 NK L1
ENSG00000111144 LTA4H 224312 sc-eQTL 7.62e-01 -0.0226 0.0748 0.644 NK L1
ENSG00000111145 ELK3 73457 sc-eQTL 3.85e-01 0.0616 0.0708 0.644 NK L1
ENSG00000139343 SNRPF 408904 sc-eQTL 4.59e-01 -0.0436 0.0587 0.644 NK L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 3.49e-02 -0.156 0.0737 0.644 NK L1
ENSG00000059758 CDK17 -132648 sc-eQTL 2.32e-01 -0.0441 0.0368 0.643 Other_T L1
ENSG00000074527 NTN4 476680 sc-eQTL 6.50e-01 -0.031 0.0683 0.643 Other_T L1
ENSG00000111142 METAP2 794312 sc-eQTL 3.64e-01 0.064 0.0704 0.643 Other_T L1
ENSG00000111144 LTA4H 224312 sc-eQTL 5.06e-01 -0.0514 0.0771 0.643 Other_T L1
ENSG00000111145 ELK3 73457 sc-eQTL 7.94e-01 -0.0157 0.0602 0.643 Other_T L1
ENSG00000139343 SNRPF 408904 sc-eQTL 5.68e-01 0.032 0.0559 0.643 Other_T L1
ENSG00000139350 NEDD1 -639391 sc-eQTL 8.94e-01 -0.0114 0.0852 0.643 Other_T L1
ENSG00000188596 CFAP54 -221739 sc-eQTL 9.85e-01 0.00167 0.0883 0.643 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -132648 sc-eQTL 7.14e-01 0.0314 0.0857 0.645 B_Activated L2
ENSG00000111142 METAP2 794312 sc-eQTL 3.74e-02 0.224 0.107 0.645 B_Activated L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.64e-01 0.0166 0.0971 0.645 B_Activated L2
ENSG00000111145 ELK3 73457 sc-eQTL 5.56e-01 0.0606 0.103 0.645 B_Activated L2
ENSG00000136014 USP44 716356 sc-eQTL 6.61e-01 -0.0346 0.0789 0.645 B_Activated L2
ENSG00000139343 SNRPF 408904 sc-eQTL 8.82e-01 0.0144 0.0969 0.645 B_Activated L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.68e-01 -0.0579 0.101 0.645 B_Activated L2
ENSG00000059758 CDK17 -132648 sc-eQTL 9.54e-01 -0.00419 0.0724 0.642 B_Intermediate L2
ENSG00000111142 METAP2 794312 sc-eQTL 4.97e-01 -0.0563 0.0829 0.642 B_Intermediate L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.82e-01 -0.0104 0.0701 0.642 B_Intermediate L2
ENSG00000111145 ELK3 73457 sc-eQTL 1.01e-01 -0.13 0.0785 0.642 B_Intermediate L2
ENSG00000136014 USP44 716356 sc-eQTL 4.80e-01 -0.0659 0.0931 0.642 B_Intermediate L2
ENSG00000139343 SNRPF 408904 sc-eQTL 9.41e-01 -0.0058 0.0787 0.642 B_Intermediate L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 2.93e-01 -0.0969 0.092 0.642 B_Intermediate L2
ENSG00000059758 CDK17 -132648 sc-eQTL 8.23e-01 0.0159 0.071 0.64 B_Memory L2
ENSG00000111142 METAP2 794312 sc-eQTL 2.63e-01 0.103 0.092 0.64 B_Memory L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.89e-01 -0.0115 0.0819 0.64 B_Memory L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.14e-01 -0.0811 0.0804 0.64 B_Memory L2
ENSG00000136014 USP44 716356 sc-eQTL 5.06e-01 0.0588 0.0883 0.64 B_Memory L2
ENSG00000139343 SNRPF 408904 sc-eQTL 1.31e-01 0.129 0.0849 0.64 B_Memory L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 1.29e-01 -0.143 0.0939 0.64 B_Memory L2
ENSG00000059758 CDK17 -132648 sc-eQTL 2.02e-01 -0.0753 0.0588 0.643 B_Naive1 L2
ENSG00000111142 METAP2 794312 sc-eQTL 9.68e-01 -0.00306 0.0764 0.643 B_Naive1 L2
ENSG00000111144 LTA4H 224312 sc-eQTL 7.40e-01 -0.0205 0.0618 0.643 B_Naive1 L2
ENSG00000111145 ELK3 73457 sc-eQTL 7.27e-01 -0.0255 0.0731 0.643 B_Naive1 L2
ENSG00000136014 USP44 716356 sc-eQTL 9.07e-01 0.0108 0.0919 0.643 B_Naive1 L2
ENSG00000139343 SNRPF 408904 sc-eQTL 2.86e-01 0.0758 0.0709 0.643 B_Naive1 L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.30e-01 -0.0315 0.0912 0.643 B_Naive1 L2
ENSG00000059758 CDK17 -132648 sc-eQTL 9.62e-01 0.0035 0.0737 0.642 B_Naive2 L2
ENSG00000111142 METAP2 794312 sc-eQTL 9.49e-01 0.00565 0.089 0.642 B_Naive2 L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.47e-01 -0.0135 0.0698 0.642 B_Naive2 L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.71e-01 -0.0737 0.0822 0.642 B_Naive2 L2
ENSG00000136014 USP44 716356 sc-eQTL 2.94e-01 -0.0934 0.0887 0.642 B_Naive2 L2
ENSG00000139343 SNRPF 408904 sc-eQTL 3.87e-02 0.168 0.0809 0.642 B_Naive2 L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 2.25e-01 0.118 0.0969 0.642 B_Naive2 L2
ENSG00000059758 CDK17 -132648 sc-eQTL 7.13e-01 -0.0251 0.0682 0.636 CD4_CTL L2
ENSG00000111142 METAP2 794312 sc-eQTL 2.90e-01 0.103 0.0974 0.636 CD4_CTL L2
ENSG00000111144 LTA4H 224312 sc-eQTL 9.40e-02 -0.161 0.0955 0.636 CD4_CTL L2
ENSG00000111145 ELK3 73457 sc-eQTL 7.78e-01 0.0275 0.0974 0.636 CD4_CTL L2
ENSG00000136014 USP44 716356 sc-eQTL 4.59e-01 0.0577 0.0776 0.636 CD4_CTL L2
ENSG00000139343 SNRPF 408904 sc-eQTL 7.18e-01 -0.0306 0.0846 0.636 CD4_CTL L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 1.42e-01 -0.144 0.0974 0.636 CD4_CTL L2
ENSG00000059758 CDK17 -132648 sc-eQTL 5.16e-01 0.0278 0.0428 0.643 CD4_Naive L2
ENSG00000111142 METAP2 794312 sc-eQTL 3.39e-01 0.0591 0.0617 0.643 CD4_Naive L2
ENSG00000111144 LTA4H 224312 sc-eQTL 3.99e-03 -0.177 0.0608 0.643 CD4_Naive L2
ENSG00000111145 ELK3 73457 sc-eQTL 4.13e-01 -0.0507 0.0619 0.643 CD4_Naive L2
ENSG00000136014 USP44 716356 sc-eQTL 7.60e-01 -0.0265 0.0869 0.643 CD4_Naive L2
ENSG00000139343 SNRPF 408904 sc-eQTL 8.84e-01 -0.00807 0.0551 0.643 CD4_Naive L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 4.91e-01 -0.0468 0.0677 0.643 CD4_Naive L2
ENSG00000059758 CDK17 -132648 sc-eQTL 3.10e-01 -0.0425 0.0417 0.643 CD4_TCM L2
ENSG00000111142 METAP2 794312 sc-eQTL 3.07e-01 -0.0728 0.071 0.643 CD4_TCM L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.22e-01 0.016 0.0709 0.643 CD4_TCM L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.80e-01 -0.0613 0.0697 0.643 CD4_TCM L2
ENSG00000136014 USP44 716356 sc-eQTL 7.77e-01 -0.0273 0.0965 0.643 CD4_TCM L2
ENSG00000139343 SNRPF 408904 sc-eQTL 8.80e-01 0.00865 0.0572 0.643 CD4_TCM L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 3.07e-01 0.0798 0.078 0.643 CD4_TCM L2
ENSG00000059758 CDK17 -132648 sc-eQTL 2.44e-01 0.0596 0.051 0.643 CD4_TEM L2
ENSG00000111142 METAP2 794312 sc-eQTL 6.91e-01 0.0341 0.0855 0.643 CD4_TEM L2
ENSG00000111144 LTA4H 224312 sc-eQTL 4.46e-01 -0.0602 0.0789 0.643 CD4_TEM L2
ENSG00000111145 ELK3 73457 sc-eQTL 4.78e-01 -0.0521 0.0733 0.643 CD4_TEM L2
ENSG00000136014 USP44 716356 sc-eQTL 7.19e-01 -0.0325 0.0903 0.643 CD4_TEM L2
ENSG00000139343 SNRPF 408904 sc-eQTL 2.04e-01 -0.0975 0.0765 0.643 CD4_TEM L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.71e-01 0.0266 0.0911 0.643 CD4_TEM L2
ENSG00000059758 CDK17 -132648 sc-eQTL 6.71e-01 0.0214 0.0503 0.643 CD8_CTL L2
ENSG00000111142 METAP2 794312 sc-eQTL 5.83e-01 -0.0478 0.087 0.643 CD8_CTL L2
ENSG00000111144 LTA4H 224312 sc-eQTL 9.80e-01 0.00225 0.0909 0.643 CD8_CTL L2
ENSG00000111145 ELK3 73457 sc-eQTL 2.37e-01 0.098 0.0825 0.643 CD8_CTL L2
ENSG00000136014 USP44 716356 sc-eQTL 6.00e-01 0.0484 0.0922 0.643 CD8_CTL L2
ENSG00000139343 SNRPF 408904 sc-eQTL 9.70e-01 -0.00285 0.0761 0.643 CD8_CTL L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 9.72e-01 -0.00296 0.0854 0.643 CD8_CTL L2
ENSG00000059758 CDK17 -132648 sc-eQTL 7.17e-01 -0.0216 0.0595 0.643 CD8_Naive L2
ENSG00000111142 METAP2 794312 sc-eQTL 1.88e-01 0.104 0.0787 0.643 CD8_Naive L2
ENSG00000111144 LTA4H 224312 sc-eQTL 5.25e-01 0.0453 0.0712 0.643 CD8_Naive L2
ENSG00000111145 ELK3 73457 sc-eQTL 8.36e-01 0.0156 0.0754 0.643 CD8_Naive L2
ENSG00000136014 USP44 716356 sc-eQTL 3.83e-01 -0.0691 0.0791 0.643 CD8_Naive L2
ENSG00000139343 SNRPF 408904 sc-eQTL 9.99e-01 6.7e-05 0.0678 0.643 CD8_Naive L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.52e-02 -0.143 0.0801 0.643 CD8_Naive L2
ENSG00000059758 CDK17 -132648 sc-eQTL 3.96e-01 0.0566 0.0666 0.637 CD8_TCM L2
ENSG00000111142 METAP2 794312 sc-eQTL 6.40e-01 -0.0466 0.0995 0.637 CD8_TCM L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.43e-01 -0.0194 0.098 0.637 CD8_TCM L2
ENSG00000111145 ELK3 73457 sc-eQTL 7.04e-01 -0.0316 0.083 0.637 CD8_TCM L2
ENSG00000136014 USP44 716356 sc-eQTL 5.10e-01 0.0593 0.0898 0.637 CD8_TCM L2
ENSG00000139343 SNRPF 408904 sc-eQTL 6.21e-01 0.0473 0.0955 0.637 CD8_TCM L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 3.94e-01 -0.0799 0.0934 0.637 CD8_TCM L2
ENSG00000059758 CDK17 -132648 sc-eQTL 3.40e-01 0.0767 0.0802 0.653 CD8_TEM L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.42e-01 0.0312 0.0944 0.653 CD8_TEM L2
ENSG00000111144 LTA4H 224312 sc-eQTL 7.22e-01 -0.0351 0.0984 0.653 CD8_TEM L2
ENSG00000111145 ELK3 73457 sc-eQTL 1.70e-01 -0.133 0.0963 0.653 CD8_TEM L2
ENSG00000136014 USP44 716356 sc-eQTL 1.38e-01 0.122 0.0819 0.653 CD8_TEM L2
ENSG00000139343 SNRPF 408904 sc-eQTL 9.22e-01 0.00886 0.0899 0.653 CD8_TEM L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 1.06e-01 -0.158 0.097 0.653 CD8_TEM L2
ENSG00000059758 CDK17 -132648 sc-eQTL 2.05e-02 -0.126 0.0539 0.645 MAIT L2
ENSG00000074527 NTN4 476680 sc-eQTL 9.09e-01 -0.00837 0.0736 0.645 MAIT L2
ENSG00000111142 METAP2 794312 sc-eQTL 1.77e-01 0.125 0.0922 0.645 MAIT L2
ENSG00000111144 LTA4H 224312 sc-eQTL 9.72e-01 -0.003 0.0843 0.645 MAIT L2
ENSG00000111145 ELK3 73457 sc-eQTL 5.55e-01 -0.0418 0.0707 0.645 MAIT L2
ENSG00000139343 SNRPF 408904 sc-eQTL 9.65e-01 0.00355 0.082 0.645 MAIT L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.17e-01 -0.0597 0.092 0.645 MAIT L2
ENSG00000188596 CFAP54 -221739 sc-eQTL 7.31e-01 0.0314 0.0912 0.645 MAIT L2
ENSG00000059758 CDK17 -132648 sc-eQTL 5.19e-01 0.0361 0.0559 0.644 NK_CD56bright L2
ENSG00000111142 METAP2 794312 sc-eQTL 5.27e-01 0.0597 0.0943 0.644 NK_CD56bright L2
ENSG00000111144 LTA4H 224312 sc-eQTL 8.17e-01 -0.0192 0.0827 0.644 NK_CD56bright L2
ENSG00000111145 ELK3 73457 sc-eQTL 9.55e-01 -0.00501 0.0878 0.644 NK_CD56bright L2
ENSG00000139343 SNRPF 408904 sc-eQTL 7.00e-01 -0.0355 0.0918 0.644 NK_CD56bright L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.80e-01 -0.0514 0.0926 0.644 NK_CD56bright L2
ENSG00000059758 CDK17 -132648 sc-eQTL 4.79e-02 0.0951 0.0478 0.644 NK_CD56dim L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.83e-01 -0.0233 0.0845 0.644 NK_CD56dim L2
ENSG00000111144 LTA4H 224312 sc-eQTL 3.96e-01 -0.0741 0.087 0.644 NK_CD56dim L2
ENSG00000111145 ELK3 73457 sc-eQTL 4.99e-01 -0.0522 0.0771 0.644 NK_CD56dim L2
ENSG00000139343 SNRPF 408904 sc-eQTL 3.25e-01 -0.0722 0.0733 0.644 NK_CD56dim L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 6.86e-02 -0.154 0.0839 0.644 NK_CD56dim L2
ENSG00000059758 CDK17 -132648 sc-eQTL 5.21e-01 -0.0477 0.0742 0.646 NK_HLA L2
ENSG00000111142 METAP2 794312 sc-eQTL 2.12e-01 0.117 0.0933 0.646 NK_HLA L2
ENSG00000111144 LTA4H 224312 sc-eQTL 1.44e-01 -0.142 0.0969 0.646 NK_HLA L2
ENSG00000111145 ELK3 73457 sc-eQTL 2.41e-01 0.106 0.0901 0.646 NK_HLA L2
ENSG00000139343 SNRPF 408904 sc-eQTL 6.56e-01 0.042 0.0942 0.646 NK_HLA L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.81e-01 -0.0248 0.0891 0.646 NK_HLA L2
ENSG00000059758 CDK17 -132648 sc-eQTL 6.58e-01 0.0234 0.0527 0.644 NK_cytokine L2
ENSG00000111142 METAP2 794312 sc-eQTL 6.53e-01 0.0394 0.0875 0.644 NK_cytokine L2
ENSG00000111144 LTA4H 224312 sc-eQTL 6.97e-01 0.0347 0.0891 0.644 NK_cytokine L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.47e-01 0.0803 0.0851 0.644 NK_cytokine L2
ENSG00000139343 SNRPF 408904 sc-eQTL 3.46e-01 -0.0682 0.0721 0.644 NK_cytokine L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.32e-02 -0.172 0.0885 0.644 NK_cytokine L2
ENSG00000059758 CDK17 -132648 sc-eQTL 2.43e-01 0.11 0.0938 0.641 PB L2
ENSG00000111142 METAP2 794312 sc-eQTL 5.18e-01 0.0713 0.11 0.641 PB L2
ENSG00000111144 LTA4H 224312 sc-eQTL 3.35e-01 -0.0802 0.0829 0.641 PB L2
ENSG00000111145 ELK3 73457 sc-eQTL 6.39e-01 0.0501 0.107 0.641 PB L2
ENSG00000136014 USP44 716356 sc-eQTL 1.51e-01 -0.141 0.0978 0.641 PB L2
ENSG00000139343 SNRPF 408904 sc-eQTL 3.95e-01 -0.0885 0.104 0.641 PB L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 6.76e-01 0.0518 0.124 0.641 PB L2
ENSG00000059758 CDK17 -132648 sc-eQTL 8.12e-01 -0.0141 0.0593 0.641 Pro_T L2
ENSG00000074527 NTN4 476680 sc-eQTL 9.00e-01 0.00836 0.0666 0.641 Pro_T L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.38e-01 0.0263 0.0786 0.641 Pro_T L2
ENSG00000111144 LTA4H 224312 sc-eQTL 2.60e-01 -0.0881 0.0781 0.641 Pro_T L2
ENSG00000111145 ELK3 73457 sc-eQTL 2.46e-01 -0.11 0.0944 0.641 Pro_T L2
ENSG00000139343 SNRPF 408904 sc-eQTL 8.56e-01 0.0109 0.0597 0.641 Pro_T L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 9.15e-01 0.00925 0.0867 0.641 Pro_T L2
ENSG00000188596 CFAP54 -221739 sc-eQTL 3.69e-01 -0.0631 0.07 0.641 Pro_T L2
ENSG00000059758 CDK17 -132648 sc-eQTL 2.22e-01 -0.0789 0.0645 0.643 Treg L2
ENSG00000111142 METAP2 794312 sc-eQTL 9.50e-01 0.00557 0.0881 0.643 Treg L2
ENSG00000111144 LTA4H 224312 sc-eQTL 5.82e-01 -0.0452 0.0819 0.643 Treg L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.32e-01 -0.0721 0.0741 0.643 Treg L2
ENSG00000136014 USP44 716356 sc-eQTL 2.71e-01 0.0917 0.0832 0.643 Treg L2
ENSG00000139343 SNRPF 408904 sc-eQTL 6.33e-02 0.159 0.0853 0.643 Treg L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 9.82e-01 0.00221 0.096 0.643 Treg L2
ENSG00000059758 CDK17 -132648 sc-eQTL 9.53e-01 -0.00461 0.0779 0.627 cDC L2
ENSG00000084110 HAL 271467 sc-eQTL 8.77e-01 -0.0125 0.081 0.627 cDC L2
ENSG00000111142 METAP2 794312 sc-eQTL 6.60e-01 0.0431 0.0977 0.627 cDC L2
ENSG00000111144 LTA4H 224312 sc-eQTL 2.49e-01 0.0801 0.0692 0.627 cDC L2
ENSG00000111145 ELK3 73457 sc-eQTL 2.42e-01 0.107 0.0913 0.627 cDC L2
ENSG00000139343 SNRPF 408904 sc-eQTL 5.65e-01 -0.0441 0.0766 0.627 cDC L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.82e-01 -0.0259 0.0934 0.627 cDC L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 8.54e-01 -0.0145 0.0788 0.627 cDC L2
ENSG00000059758 CDK17 -132648 sc-eQTL 1.83e-03 -0.215 0.068 0.643 cMono_IL1B L2
ENSG00000084110 HAL 271467 sc-eQTL 2.24e-01 0.0923 0.0756 0.643 cMono_IL1B L2
ENSG00000111142 METAP2 794312 sc-eQTL 3.51e-01 0.0734 0.0786 0.643 cMono_IL1B L2
ENSG00000111144 LTA4H 224312 sc-eQTL 4.73e-01 -0.0589 0.0819 0.643 cMono_IL1B L2
ENSG00000111145 ELK3 73457 sc-eQTL 4.08e-01 -0.0523 0.0631 0.643 cMono_IL1B L2
ENSG00000139343 SNRPF 408904 sc-eQTL 4.21e-01 0.0525 0.0651 0.643 cMono_IL1B L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.51e-01 -0.0285 0.0897 0.643 cMono_IL1B L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 2.28e-01 0.101 0.0835 0.643 cMono_IL1B L2
ENSG00000059758 CDK17 -132648 sc-eQTL 1.45e-01 -0.114 0.0779 0.643 cMono_S100A L2
ENSG00000084110 HAL 271467 sc-eQTL 1.40e-01 0.13 0.0874 0.643 cMono_S100A L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.52e-02 0.158 0.0882 0.643 cMono_S100A L2
ENSG00000111144 LTA4H 224312 sc-eQTL 4.99e-01 -0.0594 0.0877 0.643 cMono_S100A L2
ENSG00000111145 ELK3 73457 sc-eQTL 3.89e-01 0.0616 0.0714 0.643 cMono_S100A L2
ENSG00000139343 SNRPF 408904 sc-eQTL 4.16e-02 -0.143 0.07 0.643 cMono_S100A L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 2.16e-01 -0.118 0.095 0.643 cMono_S100A L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 5.48e-01 -0.054 0.0897 0.643 cMono_S100A L2
ENSG00000059758 CDK17 -132648 sc-eQTL 7.99e-01 0.0191 0.0748 0.642 gdT L2
ENSG00000074527 NTN4 476680 sc-eQTL 6.70e-01 -0.0366 0.0858 0.642 gdT L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.21e-01 -0.0384 0.107 0.642 gdT L2
ENSG00000111144 LTA4H 224312 sc-eQTL 2.85e-01 0.12 0.111 0.642 gdT L2
ENSG00000111145 ELK3 73457 sc-eQTL 2.40e-01 0.122 0.103 0.642 gdT L2
ENSG00000139343 SNRPF 408904 sc-eQTL 2.28e-02 0.226 0.0981 0.642 gdT L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 2.46e-01 -0.128 0.11 0.642 gdT L2
ENSG00000188596 CFAP54 -221739 sc-eQTL 6.95e-01 0.038 0.0966 0.642 gdT L2
ENSG00000059758 CDK17 -132648 sc-eQTL 9.03e-01 0.0107 0.0881 0.638 intMono L2
ENSG00000084110 HAL 271467 sc-eQTL 5.56e-01 0.0524 0.089 0.638 intMono L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.01e-01 -0.0387 0.101 0.638 intMono L2
ENSG00000111144 LTA4H 224312 sc-eQTL 4.35e-01 0.0714 0.0913 0.638 intMono L2
ENSG00000111145 ELK3 73457 sc-eQTL 8.14e-01 -0.0192 0.0814 0.638 intMono L2
ENSG00000139343 SNRPF 408904 sc-eQTL 6.42e-02 -0.161 0.0863 0.638 intMono L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 9.50e-01 -0.00565 0.0904 0.638 intMono L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 4.43e-01 0.0698 0.0908 0.638 intMono L2
ENSG00000059758 CDK17 -132648 sc-eQTL 3.40e-01 0.0678 0.0709 0.64 ncMono L2
ENSG00000084110 HAL 271467 sc-eQTL 6.85e-01 -0.0322 0.0793 0.64 ncMono L2
ENSG00000111142 METAP2 794312 sc-eQTL 7.58e-01 0.0296 0.0959 0.64 ncMono L2
ENSG00000111144 LTA4H 224312 sc-eQTL 6.90e-01 0.0353 0.0884 0.64 ncMono L2
ENSG00000111145 ELK3 73457 sc-eQTL 9.88e-01 -0.00119 0.0759 0.64 ncMono L2
ENSG00000139343 SNRPF 408904 sc-eQTL 7.57e-02 -0.137 0.0769 0.64 ncMono L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 7.79e-01 0.0231 0.0823 0.64 ncMono L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 5.89e-01 0.0508 0.0939 0.64 ncMono L2
ENSG00000059758 CDK17 -132648 sc-eQTL 9.89e-01 0.00126 0.0927 0.63 pDC L2
ENSG00000084110 HAL 271467 sc-eQTL 2.69e-03 0.232 0.076 0.63 pDC L2
ENSG00000111142 METAP2 794312 sc-eQTL 6.14e-01 0.0534 0.106 0.63 pDC L2
ENSG00000111144 LTA4H 224312 sc-eQTL 5.58e-01 -0.0514 0.0875 0.63 pDC L2
ENSG00000111145 ELK3 73457 sc-eQTL 8.34e-01 0.0225 0.107 0.63 pDC L2
ENSG00000139343 SNRPF 408904 sc-eQTL 8.00e-01 0.0237 0.0935 0.63 pDC L2
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.04e-02 0.201 0.102 0.63 pDC L2
ENSG00000257715 AC007298.1 242509 sc-eQTL 3.13e-01 0.0892 0.0882 0.63 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -132648 sc-eQTL 6.66e-01 0.0263 0.0609 0.643 B_Memory LOneK1K
ENSG00000111142 METAP2 794312 sc-eQTL 5.70e-01 0.0481 0.0846 0.643 B_Memory LOneK1K
ENSG00000111144 LTA4H 224312 sc-eQTL 8.62e-01 0.011 0.0632 0.643 B_Memory LOneK1K
ENSG00000111145 ELK3 73457 sc-eQTL 8.70e-02 -0.123 0.0718 0.643 B_Memory LOneK1K
ENSG00000136014 USP44 716356 sc-eQTL 9.79e-01 0.00232 0.0901 0.643 B_Memory LOneK1K
ENSG00000139343 SNRPF 408904 sc-eQTL 2.71e-01 0.0771 0.0698 0.643 B_Memory LOneK1K
ENSG00000139350 NEDD1 -639391 sc-eQTL 5.09e-02 -0.179 0.091 0.643 B_Memory LOneK1K
ENSG00000059758 CDK17 -132648 sc-eQTL 1.45e-01 -0.0772 0.0528 0.643 B_Naive LOneK1K
ENSG00000111142 METAP2 794312 sc-eQTL 9.57e-01 -0.00386 0.0718 0.643 B_Naive LOneK1K
ENSG00000111144 LTA4H 224312 sc-eQTL 8.07e-01 0.0146 0.0595 0.643 B_Naive LOneK1K
ENSG00000111145 ELK3 73457 sc-eQTL 1.26e-01 -0.104 0.0674 0.643 B_Naive LOneK1K
ENSG00000136014 USP44 716356 sc-eQTL 7.77e-01 0.0235 0.0829 0.643 B_Naive LOneK1K
ENSG00000139343 SNRPF 408904 sc-eQTL 1.67e-01 0.0943 0.068 0.643 B_Naive LOneK1K
ENSG00000139350 NEDD1 -639391 sc-eQTL 4.23e-01 0.0724 0.0902 0.643 B_Naive LOneK1K
ENSG00000059758 CDK17 -132648 sc-eQTL 1.80e-03 -0.197 0.0622 0.643 CD14_Mono LOneK1K
ENSG00000084110 HAL 271467 sc-eQTL 2.23e-01 0.0938 0.0768 0.643 CD14_Mono LOneK1K
ENSG00000111142 METAP2 794312 sc-eQTL 1.54e-01 0.103 0.0722 0.643 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 224312 sc-eQTL 8.53e-01 -0.0157 0.0846 0.643 CD14_Mono LOneK1K
ENSG00000111145 ELK3 73457 sc-eQTL 7.61e-01 -0.0186 0.0611 0.643 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 408904 sc-eQTL 6.14e-01 -0.0298 0.0589 0.643 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -639391 sc-eQTL 2.86e-01 -0.0986 0.0922 0.643 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 242509 sc-eQTL 6.02e-01 0.0447 0.0856 0.643 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -132648 sc-eQTL 6.96e-01 0.0251 0.0643 0.644 CD16_Mono LOneK1K
ENSG00000084110 HAL 271467 sc-eQTL 8.26e-01 0.0167 0.076 0.644 CD16_Mono LOneK1K
ENSG00000111142 METAP2 794312 sc-eQTL 8.19e-01 0.0197 0.0862 0.644 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 224312 sc-eQTL 8.85e-01 0.0122 0.0842 0.644 CD16_Mono LOneK1K
ENSG00000111145 ELK3 73457 sc-eQTL 3.77e-01 -0.0551 0.0622 0.644 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 408904 sc-eQTL 1.66e-01 -0.089 0.064 0.644 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -639391 sc-eQTL 6.45e-01 -0.038 0.0824 0.644 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 242509 sc-eQTL 8.31e-01 0.0187 0.0872 0.644 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -132648 sc-eQTL 2.53e-01 0.0515 0.0449 0.644 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 794312 sc-eQTL 9.56e-01 0.00379 0.0686 0.644 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 224312 sc-eQTL 8.98e-01 -0.0101 0.0784 0.644 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 73457 sc-eQTL 6.98e-01 0.0279 0.0717 0.644 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 408904 sc-eQTL 2.66e-01 -0.0683 0.0612 0.644 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -639391 sc-eQTL 4.49e-02 -0.153 0.0758 0.644 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111144 LTA4H 224312 eQTL 0.0222 -0.0487 0.0212 0.0 0.0 0.345
ENSG00000111145 ELK3 73457 eQTL 3.64e-07 -0.0911 0.0178 0.0 0.0 0.345

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 73457 2.34e-05 1.39e-05 5.75e-06 7.63e-06 2.38e-06 6.19e-06 1.44e-05 1.24e-06 8.59e-06 3.43e-06 1.12e-05 5.16e-06 1.51e-05 3.95e-06 3.51e-06 5.06e-06 7.77e-06 6.51e-06 2.55e-06 2.07e-06 5.06e-06 9.58e-06 1.72e-05 2.06e-06 2e-05 3.77e-06 3.87e-06 3e-06 1.6e-05 9.09e-06 4.51e-06 4.71e-07 8e-07 3.64e-06 4.96e-06 2.62e-06 1.07e-06 2e-06 9.5e-07 1.08e-06 1.03e-06 3.51e-05 3.74e-06 4.02e-07 7.05e-07 1.74e-06 9.55e-07 6.9e-07 6.01e-07
ENSG00000188596 \N -221743 7.28e-06 4.77e-06 1.74e-06 3.45e-06 1.33e-06 1.91e-06 4.08e-06 4.11e-07 2.88e-06 8.83e-07 3.02e-06 1.44e-06 7.51e-06 1.43e-06 1.26e-06 1.18e-06 2e-06 2.13e-06 1.09e-06 9.54e-07 1.53e-06 3.87e-06 4.56e-06 9.91e-07 5.93e-06 1.23e-06 1.28e-06 1.8e-06 4.58e-06 3.95e-06 1.94e-06 2.58e-07 5.91e-07 2.84e-06 2.1e-06 1.04e-06 8.34e-07 8.97e-07 1.2e-06 8.19e-07 4.59e-07 8.83e-06 2.48e-06 3.05e-07 2.89e-07 1.34e-06 7.24e-07 2.41e-07 2.3e-07