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Genes within 1Mb (chr12:96266933:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -133547 sc-eQTL 9.83e-01 -0.00103 0.0476 0.647 B L1
ENSG00000111142 METAP2 793413 sc-eQTL 7.58e-01 -0.0207 0.0673 0.647 B L1
ENSG00000111144 LTA4H 223413 sc-eQTL 8.31e-01 0.0126 0.0591 0.647 B L1
ENSG00000111145 ELK3 72558 sc-eQTL 1.04e-01 -0.102 0.0625 0.647 B L1
ENSG00000136014 USP44 715457 sc-eQTL 8.53e-01 -0.0144 0.0776 0.647 B L1
ENSG00000139343 SNRPF 408005 sc-eQTL 7.22e-01 0.0204 0.0571 0.647 B L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.76e-01 -0.0238 0.0834 0.647 B L1
ENSG00000059758 CDK17 -133547 sc-eQTL 9.00e-01 -0.00493 0.0392 0.647 CD4T L1
ENSG00000111142 METAP2 793413 sc-eQTL 5.98e-01 0.0288 0.0547 0.647 CD4T L1
ENSG00000111144 LTA4H 223413 sc-eQTL 2.13e-02 -0.123 0.0532 0.647 CD4T L1
ENSG00000111145 ELK3 72558 sc-eQTL 3.03e-01 -0.0601 0.0582 0.647 CD4T L1
ENSG00000136014 USP44 715457 sc-eQTL 8.03e-01 -0.0208 0.0832 0.647 CD4T L1
ENSG00000139343 SNRPF 408005 sc-eQTL 5.39e-01 -0.0314 0.0509 0.647 CD4T L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 8.40e-01 0.0127 0.0628 0.647 CD4T L1
ENSG00000059758 CDK17 -133547 sc-eQTL 8.45e-01 -0.00786 0.0403 0.647 CD8T L1
ENSG00000111142 METAP2 793413 sc-eQTL 7.75e-01 0.0186 0.065 0.647 CD8T L1
ENSG00000111144 LTA4H 223413 sc-eQTL 3.67e-01 -0.039 0.0432 0.647 CD8T L1
ENSG00000111145 ELK3 72558 sc-eQTL 4.81e-01 -0.0459 0.065 0.647 CD8T L1
ENSG00000136014 USP44 715457 sc-eQTL 9.73e-01 -0.00248 0.074 0.647 CD8T L1
ENSG00000139343 SNRPF 408005 sc-eQTL 4.70e-01 0.0386 0.0533 0.647 CD8T L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 9.07e-02 -0.12 0.0704 0.647 CD8T L1
ENSG00000059758 CDK17 -133547 sc-eQTL 9.92e-01 0.000743 0.0737 0.642 DC L1
ENSG00000084110 HAL 270568 sc-eQTL 2.61e-01 0.0943 0.0836 0.642 DC L1
ENSG00000111142 METAP2 793413 sc-eQTL 8.56e-01 0.0168 0.0924 0.642 DC L1
ENSG00000111144 LTA4H 223413 sc-eQTL 9.21e-01 0.00679 0.0686 0.642 DC L1
ENSG00000111145 ELK3 72558 sc-eQTL 4.42e-01 0.0646 0.0839 0.642 DC L1
ENSG00000139343 SNRPF 408005 sc-eQTL 7.91e-01 0.0186 0.0698 0.642 DC L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.08e-01 0.0336 0.0896 0.642 DC L1
ENSG00000257715 AC007298.1 241610 sc-eQTL 3.93e-01 -0.0692 0.0808 0.642 DC L1
ENSG00000059758 CDK17 -133547 sc-eQTL 5.94e-02 -0.116 0.0614 0.647 Mono L1
ENSG00000084110 HAL 270568 sc-eQTL 6.96e-02 0.141 0.0774 0.647 Mono L1
ENSG00000111142 METAP2 793413 sc-eQTL 5.90e-01 0.0363 0.0673 0.647 Mono L1
ENSG00000111144 LTA4H 223413 sc-eQTL 8.69e-01 -0.0145 0.088 0.647 Mono L1
ENSG00000111145 ELK3 72558 sc-eQTL 8.66e-01 -0.01 0.0591 0.647 Mono L1
ENSG00000139343 SNRPF 408005 sc-eQTL 2.47e-01 -0.0645 0.0556 0.647 Mono L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 2.33e-01 -0.102 0.0853 0.647 Mono L1
ENSG00000257715 AC007298.1 241610 sc-eQTL 7.67e-01 0.0246 0.0829 0.647 Mono L1
ENSG00000059758 CDK17 -133547 sc-eQTL 1.23e-01 0.0686 0.0443 0.648 NK L1
ENSG00000111142 METAP2 793413 sc-eQTL 8.94e-01 -0.00884 0.066 0.648 NK L1
ENSG00000111144 LTA4H 223413 sc-eQTL 7.75e-01 -0.0217 0.0756 0.648 NK L1
ENSG00000111145 ELK3 72558 sc-eQTL 3.53e-01 0.0667 0.0716 0.648 NK L1
ENSG00000139343 SNRPF 408005 sc-eQTL 3.63e-01 -0.0541 0.0594 0.648 NK L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 3.53e-02 -0.158 0.0745 0.648 NK L1
ENSG00000059758 CDK17 -133547 sc-eQTL 1.55e-01 -0.0529 0.0371 0.647 Other_T L1
ENSG00000074527 NTN4 475781 sc-eQTL 7.18e-01 -0.0249 0.0688 0.647 Other_T L1
ENSG00000111142 METAP2 793413 sc-eQTL 3.46e-01 0.067 0.0709 0.647 Other_T L1
ENSG00000111144 LTA4H 223413 sc-eQTL 5.02e-01 -0.0523 0.0777 0.647 Other_T L1
ENSG00000111145 ELK3 72558 sc-eQTL 7.72e-01 -0.0176 0.0607 0.647 Other_T L1
ENSG00000139343 SNRPF 408005 sc-eQTL 7.23e-01 0.0201 0.0564 0.647 Other_T L1
ENSG00000139350 NEDD1 -640290 sc-eQTL 9.46e-01 -0.00587 0.0859 0.647 Other_T L1
ENSG00000188596 CFAP54 -222638 sc-eQTL 9.50e-01 0.0056 0.089 0.647 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -133547 sc-eQTL 7.76e-01 0.0244 0.0856 0.648 B_Activated L2
ENSG00000111142 METAP2 793413 sc-eQTL 4.53e-02 0.215 0.107 0.648 B_Activated L2
ENSG00000111144 LTA4H 223413 sc-eQTL 8.01e-01 0.0245 0.0969 0.648 B_Activated L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.10e-01 0.0677 0.103 0.648 B_Activated L2
ENSG00000136014 USP44 715457 sc-eQTL 5.89e-01 -0.0426 0.0788 0.648 B_Activated L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.56e-01 0.0301 0.0968 0.648 B_Activated L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 5.94e-01 -0.0541 0.101 0.648 B_Activated L2
ENSG00000059758 CDK17 -133547 sc-eQTL 8.88e-01 -0.0103 0.073 0.646 B_Intermediate L2
ENSG00000111142 METAP2 793413 sc-eQTL 3.60e-01 -0.0766 0.0836 0.646 B_Intermediate L2
ENSG00000111144 LTA4H 223413 sc-eQTL 8.20e-01 -0.0161 0.0707 0.646 B_Intermediate L2
ENSG00000111145 ELK3 72558 sc-eQTL 8.96e-02 -0.135 0.0792 0.646 B_Intermediate L2
ENSG00000136014 USP44 715457 sc-eQTL 4.32e-01 -0.0739 0.0939 0.646 B_Intermediate L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.79e-01 -0.0223 0.0794 0.646 B_Intermediate L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 2.61e-01 -0.104 0.0927 0.646 B_Intermediate L2
ENSG00000059758 CDK17 -133547 sc-eQTL 8.28e-01 0.0156 0.0715 0.644 B_Memory L2
ENSG00000111142 METAP2 793413 sc-eQTL 3.34e-01 0.0899 0.0927 0.644 B_Memory L2
ENSG00000111144 LTA4H 223413 sc-eQTL 9.42e-01 -0.00604 0.0825 0.644 B_Memory L2
ENSG00000111145 ELK3 72558 sc-eQTL 3.61e-01 -0.0742 0.081 0.644 B_Memory L2
ENSG00000136014 USP44 715457 sc-eQTL 5.28e-01 0.0562 0.0889 0.644 B_Memory L2
ENSG00000139343 SNRPF 408005 sc-eQTL 1.42e-01 0.126 0.0855 0.644 B_Memory L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 1.15e-01 -0.15 0.0946 0.644 B_Memory L2
ENSG00000059758 CDK17 -133547 sc-eQTL 1.95e-01 -0.0771 0.0593 0.647 B_Naive1 L2
ENSG00000111142 METAP2 793413 sc-eQTL 9.39e-01 -0.0059 0.0771 0.647 B_Naive1 L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.65e-01 -0.0271 0.0624 0.647 B_Naive1 L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.81e-01 -0.0407 0.0737 0.647 B_Naive1 L2
ENSG00000136014 USP44 715457 sc-eQTL 9.63e-01 -0.00432 0.0927 0.647 B_Naive1 L2
ENSG00000139343 SNRPF 408005 sc-eQTL 3.45e-01 0.0677 0.0716 0.647 B_Naive1 L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 6.39e-01 -0.0432 0.092 0.647 B_Naive1 L2
ENSG00000059758 CDK17 -133547 sc-eQTL 9.18e-01 0.00766 0.074 0.646 B_Naive2 L2
ENSG00000111142 METAP2 793413 sc-eQTL 8.04e-01 0.0222 0.0893 0.646 B_Naive2 L2
ENSG00000111144 LTA4H 223413 sc-eQTL 7.83e-01 -0.0193 0.0701 0.646 B_Naive2 L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.75e-01 -0.0902 0.0824 0.646 B_Naive2 L2
ENSG00000136014 USP44 715457 sc-eQTL 2.21e-01 -0.109 0.089 0.646 B_Naive2 L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.75e-02 0.14 0.0815 0.646 B_Naive2 L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 1.30e-01 0.148 0.0971 0.646 B_Naive2 L2
ENSG00000059758 CDK17 -133547 sc-eQTL 6.80e-01 -0.0285 0.0689 0.641 CD4_CTL L2
ENSG00000111142 METAP2 793413 sc-eQTL 2.11e-01 0.123 0.0982 0.641 CD4_CTL L2
ENSG00000111144 LTA4H 223413 sc-eQTL 1.01e-01 -0.159 0.0965 0.641 CD4_CTL L2
ENSG00000111145 ELK3 72558 sc-eQTL 6.50e-01 0.0447 0.0983 0.641 CD4_CTL L2
ENSG00000136014 USP44 715457 sc-eQTL 5.18e-01 0.0508 0.0784 0.641 CD4_CTL L2
ENSG00000139343 SNRPF 408005 sc-eQTL 6.73e-01 -0.0361 0.0855 0.641 CD4_CTL L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 1.99e-01 -0.127 0.0985 0.641 CD4_CTL L2
ENSG00000059758 CDK17 -133547 sc-eQTL 4.55e-01 0.0324 0.0432 0.647 CD4_Naive L2
ENSG00000111142 METAP2 793413 sc-eQTL 2.63e-01 0.0699 0.0622 0.647 CD4_Naive L2
ENSG00000111144 LTA4H 223413 sc-eQTL 7.97e-03 -0.165 0.0615 0.647 CD4_Naive L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.31e-01 -0.0393 0.0625 0.647 CD4_Naive L2
ENSG00000136014 USP44 715457 sc-eQTL 8.24e-01 -0.0195 0.0877 0.647 CD4_Naive L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.58e-01 -0.0171 0.0556 0.647 CD4_Naive L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 4.25e-01 -0.0547 0.0684 0.647 CD4_Naive L2
ENSG00000059758 CDK17 -133547 sc-eQTL 2.29e-01 -0.0507 0.042 0.647 CD4_TCM L2
ENSG00000111142 METAP2 793413 sc-eQTL 3.16e-01 -0.072 0.0717 0.647 CD4_TCM L2
ENSG00000111144 LTA4H 223413 sc-eQTL 8.78e-01 0.011 0.0715 0.647 CD4_TCM L2
ENSG00000111145 ELK3 72558 sc-eQTL 4.81e-01 -0.0496 0.0703 0.647 CD4_TCM L2
ENSG00000136014 USP44 715457 sc-eQTL 7.25e-01 -0.0343 0.0973 0.647 CD4_TCM L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.22e-01 -0.013 0.0577 0.647 CD4_TCM L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 2.41e-01 0.0925 0.0786 0.647 CD4_TCM L2
ENSG00000059758 CDK17 -133547 sc-eQTL 1.62e-01 0.072 0.0513 0.647 CD4_TEM L2
ENSG00000111142 METAP2 793413 sc-eQTL 5.20e-01 0.0554 0.0861 0.647 CD4_TEM L2
ENSG00000111144 LTA4H 223413 sc-eQTL 4.96e-01 -0.0542 0.0795 0.647 CD4_TEM L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.19e-01 -0.0477 0.0739 0.647 CD4_TEM L2
ENSG00000136014 USP44 715457 sc-eQTL 8.14e-01 -0.0214 0.091 0.647 CD4_TEM L2
ENSG00000139343 SNRPF 408005 sc-eQTL 1.29e-01 -0.117 0.077 0.647 CD4_TEM L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 6.85e-01 0.0373 0.0918 0.647 CD4_TEM L2
ENSG00000059758 CDK17 -133547 sc-eQTL 6.15e-01 0.0256 0.0509 0.647 CD8_CTL L2
ENSG00000111142 METAP2 793413 sc-eQTL 5.44e-01 -0.0534 0.0879 0.647 CD8_CTL L2
ENSG00000111144 LTA4H 223413 sc-eQTL 9.92e-01 -0.00094 0.0919 0.647 CD8_CTL L2
ENSG00000111145 ELK3 72558 sc-eQTL 3.12e-01 0.0845 0.0835 0.647 CD8_CTL L2
ENSG00000136014 USP44 715457 sc-eQTL 5.53e-01 0.0554 0.0932 0.647 CD8_CTL L2
ENSG00000139343 SNRPF 408005 sc-eQTL 9.22e-01 -0.00752 0.0769 0.647 CD8_CTL L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 9.21e-01 0.0086 0.0863 0.647 CD8_CTL L2
ENSG00000059758 CDK17 -133547 sc-eQTL 7.09e-01 -0.0224 0.06 0.647 CD8_Naive L2
ENSG00000111142 METAP2 793413 sc-eQTL 2.26e-01 0.0965 0.0794 0.647 CD8_Naive L2
ENSG00000111144 LTA4H 223413 sc-eQTL 5.67e-01 0.0412 0.0718 0.647 CD8_Naive L2
ENSG00000111145 ELK3 72558 sc-eQTL 8.49e-01 0.0145 0.076 0.647 CD8_Naive L2
ENSG00000136014 USP44 715457 sc-eQTL 4.27e-01 -0.0634 0.0797 0.647 CD8_Naive L2
ENSG00000139343 SNRPF 408005 sc-eQTL 9.38e-01 -0.00534 0.0684 0.647 CD8_Naive L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.91e-02 -0.143 0.0808 0.647 CD8_Naive L2
ENSG00000059758 CDK17 -133547 sc-eQTL 4.08e-01 0.0557 0.0671 0.641 CD8_TCM L2
ENSG00000111142 METAP2 793413 sc-eQTL 8.26e-01 -0.0221 0.1 0.641 CD8_TCM L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.28e-01 -0.0479 0.0988 0.641 CD8_TCM L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.32e-01 -0.0524 0.0836 0.641 CD8_TCM L2
ENSG00000136014 USP44 715457 sc-eQTL 5.30e-01 0.057 0.0906 0.641 CD8_TCM L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.00e-01 0.0245 0.0964 0.641 CD8_TCM L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 4.91e-01 -0.0651 0.0943 0.641 CD8_TCM L2
ENSG00000059758 CDK17 -133547 sc-eQTL 3.79e-01 0.0712 0.0808 0.658 CD8_TEM L2
ENSG00000111142 METAP2 793413 sc-eQTL 6.29e-01 0.046 0.095 0.658 CD8_TEM L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.89e-01 -0.0397 0.0991 0.658 CD8_TEM L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.34e-01 -0.116 0.0971 0.658 CD8_TEM L2
ENSG00000136014 USP44 715457 sc-eQTL 1.96e-01 0.107 0.0826 0.658 CD8_TEM L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.93e-01 -0.0122 0.0906 0.658 CD8_TEM L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.76e-02 -0.173 0.0975 0.658 CD8_TEM L2
ENSG00000059758 CDK17 -133547 sc-eQTL 1.34e-02 -0.135 0.0542 0.649 MAIT L2
ENSG00000074527 NTN4 475781 sc-eQTL 9.69e-01 0.00284 0.0741 0.649 MAIT L2
ENSG00000111142 METAP2 793413 sc-eQTL 1.71e-01 0.128 0.0929 0.649 MAIT L2
ENSG00000111144 LTA4H 223413 sc-eQTL 9.97e-01 0.000275 0.0849 0.649 MAIT L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.63e-01 -0.0412 0.0712 0.649 MAIT L2
ENSG00000139343 SNRPF 408005 sc-eQTL 9.32e-01 -0.00708 0.0826 0.649 MAIT L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 4.57e-01 -0.069 0.0926 0.649 MAIT L2
ENSG00000188596 CFAP54 -222638 sc-eQTL 7.25e-01 0.0324 0.0919 0.649 MAIT L2
ENSG00000059758 CDK17 -133547 sc-eQTL 6.26e-01 0.0276 0.0564 0.649 NK_CD56bright L2
ENSG00000111142 METAP2 793413 sc-eQTL 5.09e-01 0.063 0.0951 0.649 NK_CD56bright L2
ENSG00000111144 LTA4H 223413 sc-eQTL 8.26e-01 -0.0184 0.0835 0.649 NK_CD56bright L2
ENSG00000111145 ELK3 72558 sc-eQTL 9.90e-01 -0.00109 0.0886 0.649 NK_CD56bright L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.22e-01 -0.033 0.0926 0.649 NK_CD56bright L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.09e-01 -0.0349 0.0935 0.649 NK_CD56bright L2
ENSG00000059758 CDK17 -133547 sc-eQTL 4.63e-02 0.097 0.0484 0.649 NK_CD56dim L2
ENSG00000111142 METAP2 793413 sc-eQTL 8.07e-01 -0.021 0.0856 0.649 NK_CD56dim L2
ENSG00000111144 LTA4H 223413 sc-eQTL 4.20e-01 -0.0712 0.0881 0.649 NK_CD56dim L2
ENSG00000111145 ELK3 72558 sc-eQTL 5.17e-01 -0.0507 0.078 0.649 NK_CD56dim L2
ENSG00000139343 SNRPF 408005 sc-eQTL 2.65e-01 -0.0828 0.0741 0.649 NK_CD56dim L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.00e-02 -0.155 0.085 0.649 NK_CD56dim L2
ENSG00000059758 CDK17 -133547 sc-eQTL 5.05e-01 -0.0501 0.0749 0.651 NK_HLA L2
ENSG00000111142 METAP2 793413 sc-eQTL 2.66e-01 0.105 0.0942 0.651 NK_HLA L2
ENSG00000111144 LTA4H 223413 sc-eQTL 1.11e-01 -0.157 0.0977 0.651 NK_HLA L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.74e-01 0.0998 0.0909 0.651 NK_HLA L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.00e-01 0.0241 0.095 0.651 NK_HLA L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 6.82e-01 -0.0369 0.0899 0.651 NK_HLA L2
ENSG00000059758 CDK17 -133547 sc-eQTL 6.30e-01 0.0256 0.0532 0.649 NK_cytokine L2
ENSG00000111142 METAP2 793413 sc-eQTL 7.67e-01 0.0262 0.0884 0.649 NK_cytokine L2
ENSG00000111144 LTA4H 223413 sc-eQTL 7.18e-01 0.0326 0.09 0.649 NK_cytokine L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.91e-01 0.091 0.086 0.649 NK_cytokine L2
ENSG00000139343 SNRPF 408005 sc-eQTL 3.29e-01 -0.0713 0.0729 0.649 NK_cytokine L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 5.57e-02 -0.172 0.0895 0.649 NK_cytokine L2
ENSG00000059758 CDK17 -133547 sc-eQTL 1.92e-01 0.125 0.0951 0.644 PB L2
ENSG00000111142 METAP2 793413 sc-eQTL 5.15e-01 0.0731 0.112 0.644 PB L2
ENSG00000111144 LTA4H 223413 sc-eQTL 3.10e-01 -0.0859 0.0841 0.644 PB L2
ENSG00000111145 ELK3 72558 sc-eQTL 7.15e-01 0.0396 0.108 0.644 PB L2
ENSG00000136014 USP44 715457 sc-eQTL 1.60e-01 -0.141 0.0994 0.644 PB L2
ENSG00000139343 SNRPF 408005 sc-eQTL 4.57e-01 -0.0787 0.105 0.644 PB L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.16e-01 0.0458 0.126 0.644 PB L2
ENSG00000059758 CDK17 -133547 sc-eQTL 7.56e-01 -0.0186 0.0598 0.646 Pro_T L2
ENSG00000074527 NTN4 475781 sc-eQTL 7.67e-01 0.0199 0.0672 0.646 Pro_T L2
ENSG00000111142 METAP2 793413 sc-eQTL 6.57e-01 0.0352 0.0793 0.646 Pro_T L2
ENSG00000111144 LTA4H 223413 sc-eQTL 1.80e-01 -0.106 0.0787 0.646 Pro_T L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.47e-01 -0.111 0.0952 0.646 Pro_T L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.56e-01 0.0109 0.0602 0.646 Pro_T L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 9.86e-01 0.00151 0.0875 0.646 Pro_T L2
ENSG00000188596 CFAP54 -222638 sc-eQTL 3.32e-01 -0.0687 0.0706 0.646 Pro_T L2
ENSG00000059758 CDK17 -133547 sc-eQTL 2.13e-01 -0.0812 0.065 0.647 Treg L2
ENSG00000111142 METAP2 793413 sc-eQTL 9.74e-01 0.00292 0.0887 0.647 Treg L2
ENSG00000111144 LTA4H 223413 sc-eQTL 5.08e-01 -0.0547 0.0825 0.647 Treg L2
ENSG00000111145 ELK3 72558 sc-eQTL 3.88e-01 -0.0647 0.0747 0.647 Treg L2
ENSG00000136014 USP44 715457 sc-eQTL 1.97e-01 0.108 0.0837 0.647 Treg L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.83e-02 0.152 0.086 0.647 Treg L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 8.31e-01 0.0207 0.0967 0.647 Treg L2
ENSG00000059758 CDK17 -133547 sc-eQTL 8.24e-01 0.0174 0.0781 0.632 cDC L2
ENSG00000084110 HAL 270568 sc-eQTL 7.97e-01 -0.021 0.0812 0.632 cDC L2
ENSG00000111142 METAP2 793413 sc-eQTL 7.85e-01 0.0267 0.098 0.632 cDC L2
ENSG00000111144 LTA4H 223413 sc-eQTL 2.22e-01 0.0849 0.0693 0.632 cDC L2
ENSG00000111145 ELK3 72558 sc-eQTL 3.73e-01 0.0819 0.0916 0.632 cDC L2
ENSG00000139343 SNRPF 408005 sc-eQTL 5.83e-01 -0.0422 0.0768 0.632 cDC L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 7.42e-01 -0.0309 0.0936 0.632 cDC L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 9.34e-01 -0.00654 0.079 0.632 cDC L2
ENSG00000059758 CDK17 -133547 sc-eQTL 7.50e-04 -0.233 0.0682 0.647 cMono_IL1B L2
ENSG00000084110 HAL 270568 sc-eQTL 1.35e-01 0.114 0.076 0.647 cMono_IL1B L2
ENSG00000111142 METAP2 793413 sc-eQTL 4.59e-01 0.0587 0.0792 0.647 cMono_IL1B L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.42e-01 -0.0385 0.0825 0.647 cMono_IL1B L2
ENSG00000111145 ELK3 72558 sc-eQTL 4.98e-01 -0.0432 0.0635 0.647 cMono_IL1B L2
ENSG00000139343 SNRPF 408005 sc-eQTL 6.87e-01 0.0265 0.0656 0.647 cMono_IL1B L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 6.11e-01 -0.0461 0.0903 0.647 cMono_IL1B L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 1.95e-01 0.109 0.084 0.647 cMono_IL1B L2
ENSG00000059758 CDK17 -133547 sc-eQTL 2.03e-01 -0.1 0.0787 0.647 cMono_S100A L2
ENSG00000084110 HAL 270568 sc-eQTL 1.20e-01 0.138 0.0882 0.647 cMono_S100A L2
ENSG00000111142 METAP2 793413 sc-eQTL 1.73e-01 0.122 0.0894 0.647 cMono_S100A L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.53e-01 -0.0399 0.0886 0.647 cMono_S100A L2
ENSG00000111145 ELK3 72558 sc-eQTL 4.50e-01 0.0546 0.0721 0.647 cMono_S100A L2
ENSG00000139343 SNRPF 408005 sc-eQTL 4.40e-02 -0.143 0.0707 0.647 cMono_S100A L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 1.45e-01 -0.14 0.0958 0.647 cMono_S100A L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 6.82e-01 -0.0372 0.0906 0.647 cMono_S100A L2
ENSG00000059758 CDK17 -133547 sc-eQTL 9.21e-01 0.0075 0.0757 0.648 gdT L2
ENSG00000074527 NTN4 475781 sc-eQTL 6.32e-01 -0.0416 0.0867 0.648 gdT L2
ENSG00000111142 METAP2 793413 sc-eQTL 7.89e-01 -0.0291 0.109 0.648 gdT L2
ENSG00000111144 LTA4H 223413 sc-eQTL 2.79e-01 0.122 0.113 0.648 gdT L2
ENSG00000111145 ELK3 72558 sc-eQTL 2.42e-01 0.123 0.104 0.648 gdT L2
ENSG00000139343 SNRPF 408005 sc-eQTL 4.39e-02 0.203 0.0996 0.648 gdT L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 3.67e-01 -0.101 0.111 0.648 gdT L2
ENSG00000188596 CFAP54 -222638 sc-eQTL 5.11e-01 0.0644 0.0977 0.648 gdT L2
ENSG00000059758 CDK17 -133547 sc-eQTL 9.75e-01 0.00275 0.0888 0.642 intMono L2
ENSG00000084110 HAL 270568 sc-eQTL 3.42e-01 0.0854 0.0896 0.642 intMono L2
ENSG00000111142 METAP2 793413 sc-eQTL 8.47e-01 -0.0197 0.102 0.642 intMono L2
ENSG00000111144 LTA4H 223413 sc-eQTL 4.56e-01 0.0687 0.0919 0.642 intMono L2
ENSG00000111145 ELK3 72558 sc-eQTL 7.26e-01 -0.0287 0.082 0.642 intMono L2
ENSG00000139343 SNRPF 408005 sc-eQTL 7.08e-02 -0.158 0.0869 0.642 intMono L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 8.36e-01 -0.0188 0.0911 0.642 intMono L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 4.40e-01 0.0707 0.0915 0.642 intMono L2
ENSG00000059758 CDK17 -133547 sc-eQTL 3.65e-01 0.065 0.0716 0.645 ncMono L2
ENSG00000084110 HAL 270568 sc-eQTL 4.68e-01 -0.0582 0.08 0.645 ncMono L2
ENSG00000111142 METAP2 793413 sc-eQTL 7.68e-01 0.0286 0.0968 0.645 ncMono L2
ENSG00000111144 LTA4H 223413 sc-eQTL 6.60e-01 0.0393 0.0892 0.645 ncMono L2
ENSG00000111145 ELK3 72558 sc-eQTL 7.81e-01 -0.0214 0.0766 0.645 ncMono L2
ENSG00000139343 SNRPF 408005 sc-eQTL 1.09e-01 -0.125 0.0778 0.645 ncMono L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 8.40e-01 0.0168 0.0832 0.645 ncMono L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 6.16e-01 0.0476 0.0948 0.645 ncMono L2
ENSG00000059758 CDK17 -133547 sc-eQTL 9.73e-01 0.00315 0.0937 0.633 pDC L2
ENSG00000084110 HAL 270568 sc-eQTL 2.84e-03 0.233 0.0769 0.633 pDC L2
ENSG00000111142 METAP2 793413 sc-eQTL 6.95e-01 0.0419 0.107 0.633 pDC L2
ENSG00000111144 LTA4H 223413 sc-eQTL 5.56e-01 -0.0522 0.0885 0.633 pDC L2
ENSG00000111145 ELK3 72558 sc-eQTL 8.78e-01 0.0167 0.108 0.633 pDC L2
ENSG00000139343 SNRPF 408005 sc-eQTL 8.62e-01 0.0165 0.0945 0.633 pDC L2
ENSG00000139350 NEDD1 -640290 sc-eQTL 6.94e-02 0.189 0.103 0.633 pDC L2
ENSG00000257715 AC007298.1 241610 sc-eQTL 3.46e-01 0.0842 0.0892 0.633 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -133547 sc-eQTL 7.23e-01 0.0218 0.0614 0.647 B_Memory LOneK1K
ENSG00000111142 METAP2 793413 sc-eQTL 8.27e-01 0.0187 0.0854 0.647 B_Memory LOneK1K
ENSG00000111144 LTA4H 223413 sc-eQTL 8.61e-01 0.0112 0.0638 0.647 B_Memory LOneK1K
ENSG00000111145 ELK3 72558 sc-eQTL 9.53e-02 -0.121 0.0724 0.647 B_Memory LOneK1K
ENSG00000136014 USP44 715457 sc-eQTL 9.82e-01 -0.00207 0.0909 0.647 B_Memory LOneK1K
ENSG00000139343 SNRPF 408005 sc-eQTL 3.53e-01 0.0656 0.0705 0.647 B_Memory LOneK1K
ENSG00000139350 NEDD1 -640290 sc-eQTL 4.15e-02 -0.188 0.0918 0.647 B_Memory LOneK1K
ENSG00000059758 CDK17 -133547 sc-eQTL 1.30e-01 -0.0804 0.0529 0.647 B_Naive LOneK1K
ENSG00000111142 METAP2 793413 sc-eQTL 9.51e-01 0.00447 0.072 0.647 B_Naive LOneK1K
ENSG00000111144 LTA4H 223413 sc-eQTL 8.18e-01 0.0138 0.0597 0.647 B_Naive LOneK1K
ENSG00000111145 ELK3 72558 sc-eQTL 5.96e-02 -0.128 0.0674 0.647 B_Naive LOneK1K
ENSG00000136014 USP44 715457 sc-eQTL 9.31e-01 0.00715 0.0831 0.647 B_Naive LOneK1K
ENSG00000139343 SNRPF 408005 sc-eQTL 3.24e-01 0.0675 0.0683 0.647 B_Naive LOneK1K
ENSG00000139350 NEDD1 -640290 sc-eQTL 3.52e-01 0.0843 0.0904 0.647 B_Naive LOneK1K
ENSG00000059758 CDK17 -133547 sc-eQTL 1.57e-03 -0.201 0.0626 0.647 CD14_Mono LOneK1K
ENSG00000084110 HAL 270568 sc-eQTL 1.63e-01 0.108 0.0773 0.647 CD14_Mono LOneK1K
ENSG00000111142 METAP2 793413 sc-eQTL 2.94e-01 0.0768 0.0729 0.647 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 223413 sc-eQTL 9.65e-01 0.00371 0.0852 0.647 CD14_Mono LOneK1K
ENSG00000111145 ELK3 72558 sc-eQTL 7.97e-01 -0.0159 0.0616 0.647 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 408005 sc-eQTL 4.90e-01 -0.0411 0.0593 0.647 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -640290 sc-eQTL 1.80e-01 -0.125 0.0928 0.647 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 241610 sc-eQTL 5.02e-01 0.058 0.0862 0.647 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -133547 sc-eQTL 7.33e-01 0.0221 0.0649 0.649 CD16_Mono LOneK1K
ENSG00000084110 HAL 270568 sc-eQTL 9.29e-01 0.00686 0.0767 0.649 CD16_Mono LOneK1K
ENSG00000111142 METAP2 793413 sc-eQTL 7.59e-01 0.0267 0.087 0.649 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 223413 sc-eQTL 8.81e-01 0.0127 0.085 0.649 CD16_Mono LOneK1K
ENSG00000111145 ELK3 72558 sc-eQTL 2.40e-01 -0.0739 0.0627 0.649 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 408005 sc-eQTL 2.30e-01 -0.0779 0.0647 0.649 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -640290 sc-eQTL 5.98e-01 -0.0439 0.0832 0.649 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 241610 sc-eQTL 8.82e-01 0.0131 0.0881 0.649 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -133547 sc-eQTL 2.39e-01 0.0537 0.0455 0.649 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 793413 sc-eQTL 9.71e-01 -0.00255 0.0694 0.649 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 223413 sc-eQTL 9.33e-01 -0.00673 0.0793 0.649 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 72558 sc-eQTL 6.65e-01 0.0314 0.0726 0.649 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 408005 sc-eQTL 1.95e-01 -0.0804 0.0619 0.649 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -640290 sc-eQTL 4.25e-02 -0.157 0.0767 0.649 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111144 LTA4H 223413 eQTL 0.0201 -0.0495 0.0213 0.0 0.0 0.344
ENSG00000111145 ELK3 72558 eQTL 2.56e-07 -0.0923 0.0178 0.0 0.0 0.344

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000111145 ELK3 72558 1.24e-05 1.68e-05 1.89e-06 8.95e-06 2.38e-06 6.2e-06 1.46e-05 2.25e-06 1.25e-05 6.02e-06 1.82e-05 7.67e-06 2.36e-05 6.06e-06 4.5e-06 8.68e-06 8.06e-06 1.06e-05 2.69e-06 2.84e-06 6.46e-06 1.3e-05 1.22e-05 3.27e-06 2.45e-05 4.71e-06 7.14e-06 4.71e-06 1.22e-05 1.14e-05 8.34e-06 9.99e-07 1.29e-06 3.54e-06 6.8e-06 2.49e-06 1.82e-06 1.89e-06 1.96e-06 9.42e-07 9.9e-07 2.49e-05 2.39e-06 1.49e-07 6.98e-07 1.75e-06 1.94e-06 7.23e-07 5.64e-07
ENSG00000188596 \N -222642 5.65e-06 7.18e-06 8.49e-07 3.57e-06 1.38e-06 1.61e-06 4.87e-06 9.6e-07 4.91e-06 2.35e-06 7.38e-06 2.94e-06 8.28e-06 2.07e-06 1.1e-06 3.77e-06 2.72e-06 3.98e-06 1.42e-06 9.52e-07 2.63e-06 5.46e-06 4.64e-06 1.83e-06 9.02e-06 1.98e-06 2.24e-06 1.75e-06 4.19e-06 4.23e-06 2.89e-06 6.09e-07 7.71e-07 1.71e-06 1.99e-06 9.52e-07 9.13e-07 4.73e-07 9.45e-07 4.55e-07 4.03e-07 9.28e-06 9.07e-07 1.87e-07 3.98e-07 8.63e-07 1.13e-06 2.02e-07 3.12e-07