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Genes within 1Mb (chr12:96265645:C:T):

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Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -134835 sc-eQTL 9.93e-01 -0.000585 0.0629 0.831 B L1
ENSG00000111142 METAP2 792125 sc-eQTL 6.48e-01 0.0406 0.0889 0.831 B L1
ENSG00000111144 LTA4H 222125 sc-eQTL 3.90e-01 0.0672 0.078 0.831 B L1
ENSG00000111145 ELK3 71270 sc-eQTL 3.25e-02 -0.177 0.0823 0.831 B L1
ENSG00000136014 USP44 714169 sc-eQTL 5.37e-01 0.0634 0.102 0.831 B L1
ENSG00000139343 SNRPF 406717 sc-eQTL 5.69e-01 0.043 0.0755 0.831 B L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.45e-01 0.104 0.11 0.831 B L1
ENSG00000059758 CDK17 -134835 sc-eQTL 6.24e-01 -0.0251 0.0512 0.831 CD4T L1
ENSG00000111142 METAP2 792125 sc-eQTL 4.52e-01 0.0538 0.0714 0.831 CD4T L1
ENSG00000111144 LTA4H 222125 sc-eQTL 2.64e-01 -0.0785 0.0702 0.831 CD4T L1
ENSG00000111145 ELK3 71270 sc-eQTL 7.64e-01 -0.0229 0.0762 0.831 CD4T L1
ENSG00000136014 USP44 714169 sc-eQTL 2.66e-01 -0.121 0.108 0.831 CD4T L1
ENSG00000139343 SNRPF 406717 sc-eQTL 7.10e-01 0.0248 0.0666 0.831 CD4T L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.35e-01 -0.0791 0.0819 0.831 CD4T L1
ENSG00000059758 CDK17 -134835 sc-eQTL 5.39e-02 -0.102 0.0529 0.831 CD8T L1
ENSG00000111142 METAP2 792125 sc-eQTL 8.72e-01 0.0139 0.0861 0.831 CD8T L1
ENSG00000111144 LTA4H 222125 sc-eQTL 3.22e-01 -0.0567 0.0571 0.831 CD8T L1
ENSG00000111145 ELK3 71270 sc-eQTL 2.46e-01 -0.0999 0.0859 0.831 CD8T L1
ENSG00000136014 USP44 714169 sc-eQTL 6.55e-01 -0.0438 0.098 0.831 CD8T L1
ENSG00000139343 SNRPF 406717 sc-eQTL 4.00e-01 0.0594 0.0705 0.831 CD8T L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.65e-02 -0.196 0.0929 0.831 CD8T L1
ENSG00000059758 CDK17 -134835 sc-eQTL 5.24e-01 0.0617 0.0966 0.829 DC L1
ENSG00000084110 HAL 269280 sc-eQTL 3.32e-01 0.107 0.11 0.829 DC L1
ENSG00000111142 METAP2 792125 sc-eQTL 9.49e-01 0.0078 0.121 0.829 DC L1
ENSG00000111144 LTA4H 222125 sc-eQTL 5.03e-01 0.0603 0.0899 0.829 DC L1
ENSG00000111145 ELK3 71270 sc-eQTL 4.80e-02 0.217 0.109 0.829 DC L1
ENSG00000139343 SNRPF 406717 sc-eQTL 1.82e-01 0.122 0.0913 0.829 DC L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 6.48e-01 0.0538 0.118 0.829 DC L1
ENSG00000257715 AC007298.1 240322 sc-eQTL 5.32e-01 -0.0665 0.106 0.829 DC L1
ENSG00000059758 CDK17 -134835 sc-eQTL 1.43e-03 -0.246 0.0762 0.831 Mono L1
ENSG00000084110 HAL 269280 sc-eQTL 1.08e-01 0.158 0.0977 0.831 Mono L1
ENSG00000111142 METAP2 792125 sc-eQTL 2.63e-01 0.095 0.0847 0.831 Mono L1
ENSG00000111144 LTA4H 222125 sc-eQTL 4.17e-01 0.0902 0.111 0.831 Mono L1
ENSG00000111145 ELK3 71270 sc-eQTL 8.77e-02 -0.127 0.074 0.831 Mono L1
ENSG00000139343 SNRPF 406717 sc-eQTL 6.49e-01 -0.032 0.0703 0.831 Mono L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 9.85e-01 -0.00209 0.108 0.831 Mono L1
ENSG00000257715 AC007298.1 240322 sc-eQTL 1.12e-01 0.166 0.104 0.831 Mono L1
ENSG00000059758 CDK17 -134835 sc-eQTL 4.61e-02 -0.116 0.0579 0.833 NK L1
ENSG00000111142 METAP2 792125 sc-eQTL 6.74e-01 0.0365 0.0865 0.833 NK L1
ENSG00000111144 LTA4H 222125 sc-eQTL 4.37e-02 -0.199 0.0983 0.833 NK L1
ENSG00000111145 ELK3 71270 sc-eQTL 5.79e-01 -0.0523 0.0941 0.833 NK L1
ENSG00000139343 SNRPF 406717 sc-eQTL 7.58e-01 -0.0241 0.0781 0.833 NK L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 2.76e-01 -0.108 0.0986 0.833 NK L1
ENSG00000059758 CDK17 -134835 sc-eQTL 1.49e-01 -0.0697 0.0481 0.831 Other_T L1
ENSG00000074527 NTN4 474493 sc-eQTL 5.52e-01 0.0532 0.0894 0.831 Other_T L1
ENSG00000111142 METAP2 792125 sc-eQTL 6.91e-01 0.0368 0.0923 0.831 Other_T L1
ENSG00000111144 LTA4H 222125 sc-eQTL 6.66e-02 -0.185 0.1 0.831 Other_T L1
ENSG00000111145 ELK3 71270 sc-eQTL 8.61e-01 -0.0138 0.0789 0.831 Other_T L1
ENSG00000139343 SNRPF 406717 sc-eQTL 7.15e-01 0.0268 0.0733 0.831 Other_T L1
ENSG00000139350 NEDD1 -641578 sc-eQTL 6.94e-01 -0.044 0.112 0.831 Other_T L1
ENSG00000188596 CFAP54 -223926 sc-eQTL 6.46e-01 -0.0532 0.116 0.831 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -134835 sc-eQTL 8.04e-01 0.0279 0.112 0.837 B_Activated L2
ENSG00000111142 METAP2 792125 sc-eQTL 5.42e-01 0.0861 0.141 0.837 B_Activated L2
ENSG00000111144 LTA4H 222125 sc-eQTL 9.93e-01 -0.00113 0.127 0.837 B_Activated L2
ENSG00000111145 ELK3 71270 sc-eQTL 3.19e-01 -0.134 0.134 0.837 B_Activated L2
ENSG00000136014 USP44 714169 sc-eQTL 2.44e-01 -0.12 0.103 0.837 B_Activated L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.99e-01 -0.163 0.126 0.837 B_Activated L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 4.62e-01 0.0976 0.132 0.837 B_Activated L2
ENSG00000059758 CDK17 -134835 sc-eQTL 7.11e-01 -0.0358 0.0964 0.83 B_Intermediate L2
ENSG00000111142 METAP2 792125 sc-eQTL 4.23e-01 -0.0886 0.11 0.83 B_Intermediate L2
ENSG00000111144 LTA4H 222125 sc-eQTL 8.59e-01 0.0166 0.0934 0.83 B_Intermediate L2
ENSG00000111145 ELK3 71270 sc-eQTL 8.60e-01 -0.0186 0.105 0.83 B_Intermediate L2
ENSG00000136014 USP44 714169 sc-eQTL 9.24e-01 0.0119 0.124 0.83 B_Intermediate L2
ENSG00000139343 SNRPF 406717 sc-eQTL 6.71e-01 -0.0446 0.105 0.83 B_Intermediate L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 9.53e-01 0.0073 0.123 0.83 B_Intermediate L2
ENSG00000059758 CDK17 -134835 sc-eQTL 8.49e-01 0.0174 0.0913 0.83 B_Memory L2
ENSG00000111142 METAP2 792125 sc-eQTL 4.77e-01 0.0845 0.119 0.83 B_Memory L2
ENSG00000111144 LTA4H 222125 sc-eQTL 7.63e-01 0.0318 0.105 0.83 B_Memory L2
ENSG00000111145 ELK3 71270 sc-eQTL 5.42e-01 -0.0633 0.103 0.83 B_Memory L2
ENSG00000136014 USP44 714169 sc-eQTL 3.83e-01 -0.0992 0.113 0.83 B_Memory L2
ENSG00000139343 SNRPF 406717 sc-eQTL 7.52e-01 0.0348 0.11 0.83 B_Memory L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 2.61e-02 -0.269 0.12 0.83 B_Memory L2
ENSG00000059758 CDK17 -134835 sc-eQTL 4.59e-01 -0.0576 0.0777 0.831 B_Naive1 L2
ENSG00000111142 METAP2 792125 sc-eQTL 3.64e-01 0.0913 0.1 0.831 B_Naive1 L2
ENSG00000111144 LTA4H 222125 sc-eQTL 1.33e-01 0.122 0.081 0.831 B_Naive1 L2
ENSG00000111145 ELK3 71270 sc-eQTL 8.75e-02 -0.164 0.0956 0.831 B_Naive1 L2
ENSG00000136014 USP44 714169 sc-eQTL 9.34e-01 -0.01 0.121 0.831 B_Naive1 L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.97e-01 0.121 0.0933 0.831 B_Naive1 L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 4.13e-01 0.0983 0.12 0.831 B_Naive1 L2
ENSG00000059758 CDK17 -134835 sc-eQTL 6.61e-01 -0.0425 0.0968 0.83 B_Naive2 L2
ENSG00000111142 METAP2 792125 sc-eQTL 6.04e-01 -0.0606 0.117 0.83 B_Naive2 L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.66e-01 -0.0527 0.0917 0.83 B_Naive2 L2
ENSG00000111145 ELK3 71270 sc-eQTL 3.03e-01 -0.112 0.108 0.83 B_Naive2 L2
ENSG00000136014 USP44 714169 sc-eQTL 2.66e-01 -0.13 0.117 0.83 B_Naive2 L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.87e-01 0.142 0.107 0.83 B_Naive2 L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.62e-01 0.116 0.127 0.83 B_Naive2 L2
ENSG00000059758 CDK17 -134835 sc-eQTL 1.66e-01 -0.124 0.0888 0.827 CD4_CTL L2
ENSG00000111142 METAP2 792125 sc-eQTL 5.39e-01 -0.0786 0.128 0.827 CD4_CTL L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.75e-02 -0.238 0.125 0.827 CD4_CTL L2
ENSG00000111145 ELK3 71270 sc-eQTL 9.14e-01 0.0138 0.127 0.827 CD4_CTL L2
ENSG00000136014 USP44 714169 sc-eQTL 4.38e-01 0.079 0.102 0.827 CD4_CTL L2
ENSG00000139343 SNRPF 406717 sc-eQTL 6.88e-01 -0.0445 0.111 0.827 CD4_CTL L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 7.98e-01 0.0328 0.128 0.827 CD4_CTL L2
ENSG00000059758 CDK17 -134835 sc-eQTL 8.17e-01 0.013 0.0561 0.831 CD4_Naive L2
ENSG00000111142 METAP2 792125 sc-eQTL 4.25e-01 0.0646 0.0808 0.831 CD4_Naive L2
ENSG00000111144 LTA4H 222125 sc-eQTL 3.77e-01 -0.0717 0.081 0.831 CD4_Naive L2
ENSG00000111145 ELK3 71270 sc-eQTL 6.82e-01 -0.0333 0.0812 0.831 CD4_Naive L2
ENSG00000136014 USP44 714169 sc-eQTL 3.20e-01 -0.113 0.114 0.831 CD4_Naive L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.45e-01 0.0682 0.072 0.831 CD4_Naive L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.67e-01 -0.123 0.0884 0.831 CD4_Naive L2
ENSG00000059758 CDK17 -134835 sc-eQTL 1.22e-01 -0.0846 0.0545 0.831 CD4_TCM L2
ENSG00000111142 METAP2 792125 sc-eQTL 6.50e-01 -0.0423 0.0933 0.831 CD4_TCM L2
ENSG00000111144 LTA4H 222125 sc-eQTL 4.73e-01 -0.0668 0.0929 0.831 CD4_TCM L2
ENSG00000111145 ELK3 71270 sc-eQTL 1.34e-01 -0.137 0.091 0.831 CD4_TCM L2
ENSG00000136014 USP44 714169 sc-eQTL 9.60e-01 -0.00627 0.126 0.831 CD4_TCM L2
ENSG00000139343 SNRPF 406717 sc-eQTL 6.38e-01 0.0354 0.075 0.831 CD4_TCM L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.41e-01 0.0206 0.103 0.831 CD4_TCM L2
ENSG00000059758 CDK17 -134835 sc-eQTL 7.04e-01 -0.0258 0.0677 0.831 CD4_TEM L2
ENSG00000111142 METAP2 792125 sc-eQTL 5.39e-01 -0.0696 0.113 0.831 CD4_TEM L2
ENSG00000111144 LTA4H 222125 sc-eQTL 7.12e-02 -0.188 0.104 0.831 CD4_TEM L2
ENSG00000111145 ELK3 71270 sc-eQTL 9.51e-01 -0.00594 0.0971 0.831 CD4_TEM L2
ENSG00000136014 USP44 714169 sc-eQTL 9.62e-01 0.00575 0.12 0.831 CD4_TEM L2
ENSG00000139343 SNRPF 406717 sc-eQTL 8.12e-01 -0.0243 0.102 0.831 CD4_TEM L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 7.26e-01 -0.0423 0.121 0.831 CD4_TEM L2
ENSG00000059758 CDK17 -134835 sc-eQTL 3.74e-03 -0.188 0.0642 0.831 CD8_CTL L2
ENSG00000111142 METAP2 792125 sc-eQTL 5.15e-01 -0.0738 0.113 0.831 CD8_CTL L2
ENSG00000111144 LTA4H 222125 sc-eQTL 1.54e-01 -0.169 0.118 0.831 CD8_CTL L2
ENSG00000111145 ELK3 71270 sc-eQTL 3.17e-01 -0.108 0.107 0.831 CD8_CTL L2
ENSG00000136014 USP44 714169 sc-eQTL 6.21e-01 0.0593 0.12 0.831 CD8_CTL L2
ENSG00000139343 SNRPF 406717 sc-eQTL 9.09e-01 0.0114 0.099 0.831 CD8_CTL L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 6.91e-01 0.0442 0.111 0.831 CD8_CTL L2
ENSG00000059758 CDK17 -134835 sc-eQTL 2.86e-01 -0.0839 0.0783 0.831 CD8_Naive L2
ENSG00000111142 METAP2 792125 sc-eQTL 1.16e-01 0.164 0.104 0.831 CD8_Naive L2
ENSG00000111144 LTA4H 222125 sc-eQTL 7.56e-01 0.0293 0.0941 0.831 CD8_Naive L2
ENSG00000111145 ELK3 71270 sc-eQTL 9.25e-01 0.00937 0.0995 0.831 CD8_Naive L2
ENSG00000136014 USP44 714169 sc-eQTL 7.72e-01 -0.0303 0.105 0.831 CD8_Naive L2
ENSG00000139343 SNRPF 406717 sc-eQTL 5.48e-01 0.0538 0.0894 0.831 CD8_Naive L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 7.31e-03 -0.284 0.105 0.831 CD8_Naive L2
ENSG00000059758 CDK17 -134835 sc-eQTL 9.20e-01 -0.00865 0.0855 0.824 CD8_TCM L2
ENSG00000111142 METAP2 792125 sc-eQTL 6.08e-01 -0.0656 0.128 0.824 CD8_TCM L2
ENSG00000111144 LTA4H 222125 sc-eQTL 4.71e-01 0.0907 0.126 0.824 CD8_TCM L2
ENSG00000111145 ELK3 71270 sc-eQTL 8.53e-01 0.0198 0.106 0.824 CD8_TCM L2
ENSG00000136014 USP44 714169 sc-eQTL 1.48e-01 0.166 0.115 0.824 CD8_TCM L2
ENSG00000139343 SNRPF 406717 sc-eQTL 6.72e-01 -0.052 0.123 0.824 CD8_TCM L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.16e-02 -0.301 0.118 0.824 CD8_TCM L2
ENSG00000059758 CDK17 -134835 sc-eQTL 5.91e-01 -0.0576 0.107 0.838 CD8_TEM L2
ENSG00000111142 METAP2 792125 sc-eQTL 9.85e-01 0.0023 0.126 0.838 CD8_TEM L2
ENSG00000111144 LTA4H 222125 sc-eQTL 6.04e-01 -0.0682 0.131 0.838 CD8_TEM L2
ENSG00000111145 ELK3 71270 sc-eQTL 3.43e-01 -0.122 0.129 0.838 CD8_TEM L2
ENSG00000136014 USP44 714169 sc-eQTL 9.64e-01 -0.00492 0.11 0.838 CD8_TEM L2
ENSG00000139343 SNRPF 406717 sc-eQTL 5.92e-01 0.0642 0.12 0.838 CD8_TEM L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.16e-01 -0.204 0.129 0.838 CD8_TEM L2
ENSG00000059758 CDK17 -134835 sc-eQTL 8.74e-03 -0.185 0.0698 0.833 MAIT L2
ENSG00000074527 NTN4 474493 sc-eQTL 1.13e-01 0.151 0.095 0.833 MAIT L2
ENSG00000111142 METAP2 792125 sc-eQTL 4.17e-01 0.0976 0.12 0.833 MAIT L2
ENSG00000111144 LTA4H 222125 sc-eQTL 2.66e-01 -0.122 0.109 0.833 MAIT L2
ENSG00000111145 ELK3 71270 sc-eQTL 5.33e-01 -0.0574 0.0919 0.833 MAIT L2
ENSG00000139343 SNRPF 406717 sc-eQTL 8.74e-01 -0.0169 0.107 0.833 MAIT L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.76e-01 -0.162 0.119 0.833 MAIT L2
ENSG00000188596 CFAP54 -223926 sc-eQTL 7.25e-01 0.0418 0.119 0.833 MAIT L2
ENSG00000059758 CDK17 -134835 sc-eQTL 1.16e-01 -0.116 0.0735 0.829 NK_CD56bright L2
ENSG00000111142 METAP2 792125 sc-eQTL 2.86e-02 0.272 0.123 0.829 NK_CD56bright L2
ENSG00000111144 LTA4H 222125 sc-eQTL 7.76e-01 -0.0311 0.109 0.829 NK_CD56bright L2
ENSG00000111145 ELK3 71270 sc-eQTL 6.27e-01 0.0564 0.116 0.829 NK_CD56bright L2
ENSG00000139343 SNRPF 406717 sc-eQTL 8.55e-01 0.0222 0.121 0.829 NK_CD56bright L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 7.84e-01 -0.0336 0.122 0.829 NK_CD56bright L2
ENSG00000059758 CDK17 -134835 sc-eQTL 2.06e-01 -0.079 0.0623 0.832 NK_CD56dim L2
ENSG00000111142 METAP2 792125 sc-eQTL 7.42e-01 0.0361 0.11 0.832 NK_CD56dim L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.02e-02 -0.22 0.112 0.832 NK_CD56dim L2
ENSG00000111145 ELK3 71270 sc-eQTL 3.67e-01 -0.0903 0.0998 0.832 NK_CD56dim L2
ENSG00000139343 SNRPF 406717 sc-eQTL 7.75e-01 -0.0272 0.0951 0.832 NK_CD56dim L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.58e-01 -0.0197 0.11 0.832 NK_CD56dim L2
ENSG00000059758 CDK17 -134835 sc-eQTL 1.57e-01 -0.136 0.096 0.824 NK_HLA L2
ENSG00000111142 METAP2 792125 sc-eQTL 1.94e-01 0.158 0.121 0.824 NK_HLA L2
ENSG00000111144 LTA4H 222125 sc-eQTL 3.85e-03 -0.362 0.124 0.824 NK_HLA L2
ENSG00000111145 ELK3 71270 sc-eQTL 7.69e-01 0.0346 0.117 0.824 NK_HLA L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.91e-01 0.16 0.122 0.824 NK_HLA L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.99e-01 -0.0977 0.116 0.824 NK_HLA L2
ENSG00000059758 CDK17 -134835 sc-eQTL 7.23e-02 -0.123 0.0682 0.832 NK_cytokine L2
ENSG00000111142 METAP2 792125 sc-eQTL 8.62e-01 -0.0199 0.114 0.832 NK_cytokine L2
ENSG00000111144 LTA4H 222125 sc-eQTL 4.74e-02 -0.229 0.115 0.832 NK_cytokine L2
ENSG00000111145 ELK3 71270 sc-eQTL 9.21e-01 -0.0111 0.111 0.832 NK_cytokine L2
ENSG00000139343 SNRPF 406717 sc-eQTL 9.75e-01 -0.00298 0.0942 0.832 NK_cytokine L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.20e-01 -0.181 0.116 0.832 NK_cytokine L2
ENSG00000059758 CDK17 -134835 sc-eQTL 3.30e-01 0.126 0.129 0.83 PB L2
ENSG00000111142 METAP2 792125 sc-eQTL 5.67e-01 0.087 0.152 0.83 PB L2
ENSG00000111144 LTA4H 222125 sc-eQTL 3.65e-01 -0.104 0.114 0.83 PB L2
ENSG00000111145 ELK3 71270 sc-eQTL 6.11e-01 -0.0747 0.147 0.83 PB L2
ENSG00000136014 USP44 714169 sc-eQTL 4.04e-01 0.114 0.135 0.83 PB L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.52e-01 -0.133 0.143 0.83 PB L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 2.37e-01 0.201 0.169 0.83 PB L2
ENSG00000059758 CDK17 -134835 sc-eQTL 8.78e-01 0.0117 0.076 0.828 Pro_T L2
ENSG00000074527 NTN4 474493 sc-eQTL 2.77e-01 0.0928 0.0851 0.828 Pro_T L2
ENSG00000111142 METAP2 792125 sc-eQTL 2.69e-01 -0.111 0.1 0.828 Pro_T L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.62e-02 -0.191 0.0995 0.828 Pro_T L2
ENSG00000111145 ELK3 71270 sc-eQTL 5.79e-01 0.0675 0.121 0.828 Pro_T L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.80e-01 0.0672 0.0764 0.828 Pro_T L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.57e-01 -0.0201 0.111 0.828 Pro_T L2
ENSG00000188596 CFAP54 -223926 sc-eQTL 6.91e-01 0.0358 0.0899 0.828 Pro_T L2
ENSG00000059758 CDK17 -134835 sc-eQTL 4.05e-01 -0.0713 0.0855 0.831 Treg L2
ENSG00000111142 METAP2 792125 sc-eQTL 2.67e-02 0.257 0.115 0.831 Treg L2
ENSG00000111144 LTA4H 222125 sc-eQTL 8.49e-01 -0.0207 0.108 0.831 Treg L2
ENSG00000111145 ELK3 71270 sc-eQTL 8.66e-01 -0.0166 0.0983 0.831 Treg L2
ENSG00000136014 USP44 714169 sc-eQTL 8.96e-01 0.0144 0.11 0.831 Treg L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.84e-01 -0.151 0.113 0.831 Treg L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.97e-01 -0.0165 0.127 0.831 Treg L2
ENSG00000059758 CDK17 -134835 sc-eQTL 8.53e-01 -0.0191 0.103 0.822 cDC L2
ENSG00000084110 HAL 269280 sc-eQTL 8.17e-01 -0.0247 0.107 0.822 cDC L2
ENSG00000111142 METAP2 792125 sc-eQTL 6.61e-01 0.0565 0.129 0.822 cDC L2
ENSG00000111144 LTA4H 222125 sc-eQTL 3.14e-01 0.0921 0.0911 0.822 cDC L2
ENSG00000111145 ELK3 71270 sc-eQTL 7.37e-02 0.215 0.12 0.822 cDC L2
ENSG00000139343 SNRPF 406717 sc-eQTL 8.04e-01 0.025 0.101 0.822 cDC L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.49e-02 -0.258 0.122 0.822 cDC L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 6.47e-01 -0.0476 0.104 0.822 cDC L2
ENSG00000059758 CDK17 -134835 sc-eQTL 2.71e-04 -0.322 0.087 0.831 cMono_IL1B L2
ENSG00000084110 HAL 269280 sc-eQTL 2.59e-01 0.111 0.0977 0.831 cMono_IL1B L2
ENSG00000111142 METAP2 792125 sc-eQTL 9.37e-01 0.00808 0.102 0.831 cMono_IL1B L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.07e-01 0.0703 0.106 0.831 cMono_IL1B L2
ENSG00000111145 ELK3 71270 sc-eQTL 2.03e-01 -0.104 0.0812 0.831 cMono_IL1B L2
ENSG00000139343 SNRPF 406717 sc-eQTL 1.35e-01 0.126 0.0837 0.831 cMono_IL1B L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.71e-01 -0.0188 0.116 0.831 cMono_IL1B L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 1.59e-02 0.259 0.107 0.831 cMono_IL1B L2
ENSG00000059758 CDK17 -134835 sc-eQTL 1.33e-01 -0.153 0.101 0.831 cMono_S100A L2
ENSG00000084110 HAL 269280 sc-eQTL 2.22e-01 0.14 0.114 0.831 cMono_S100A L2
ENSG00000111142 METAP2 792125 sc-eQTL 1.41e-01 0.17 0.115 0.831 cMono_S100A L2
ENSG00000111144 LTA4H 222125 sc-eQTL 3.54e-01 0.106 0.114 0.831 cMono_S100A L2
ENSG00000111145 ELK3 71270 sc-eQTL 1.61e-01 -0.13 0.0926 0.831 cMono_S100A L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.99e-01 -0.0775 0.0918 0.831 cMono_S100A L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 9.44e-01 0.00868 0.124 0.831 cMono_S100A L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 2.25e-01 0.142 0.116 0.831 cMono_S100A L2
ENSG00000059758 CDK17 -134835 sc-eQTL 2.12e-01 -0.123 0.098 0.821 gdT L2
ENSG00000074527 NTN4 474493 sc-eQTL 4.22e-01 -0.0908 0.113 0.821 gdT L2
ENSG00000111142 METAP2 792125 sc-eQTL 6.56e-01 -0.0631 0.141 0.821 gdT L2
ENSG00000111144 LTA4H 222125 sc-eQTL 5.29e-01 0.0928 0.147 0.821 gdT L2
ENSG00000111145 ELK3 71270 sc-eQTL 9.96e-01 0.0007 0.136 0.821 gdT L2
ENSG00000139343 SNRPF 406717 sc-eQTL 5.66e-01 0.0757 0.131 0.821 gdT L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 5.84e-01 -0.0797 0.145 0.821 gdT L2
ENSG00000188596 CFAP54 -223926 sc-eQTL 2.52e-01 0.146 0.127 0.821 gdT L2
ENSG00000059758 CDK17 -134835 sc-eQTL 6.64e-01 -0.0501 0.115 0.831 intMono L2
ENSG00000084110 HAL 269280 sc-eQTL 9.00e-01 0.0147 0.116 0.831 intMono L2
ENSG00000111142 METAP2 792125 sc-eQTL 3.52e-01 0.123 0.132 0.831 intMono L2
ENSG00000111144 LTA4H 222125 sc-eQTL 8.22e-01 0.027 0.119 0.831 intMono L2
ENSG00000111145 ELK3 71270 sc-eQTL 2.64e-01 -0.119 0.106 0.831 intMono L2
ENSG00000139343 SNRPF 406717 sc-eQTL 8.79e-01 -0.0174 0.114 0.831 intMono L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 6.39e-01 -0.0555 0.118 0.831 intMono L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 8.83e-02 0.202 0.118 0.831 intMono L2
ENSG00000059758 CDK17 -134835 sc-eQTL 9.18e-01 0.0093 0.0906 0.828 ncMono L2
ENSG00000084110 HAL 269280 sc-eQTL 2.51e-01 0.116 0.101 0.828 ncMono L2
ENSG00000111142 METAP2 792125 sc-eQTL 1.66e-01 0.169 0.122 0.828 ncMono L2
ENSG00000111144 LTA4H 222125 sc-eQTL 1.28e-01 0.172 0.112 0.828 ncMono L2
ENSG00000111145 ELK3 71270 sc-eQTL 1.20e-01 -0.15 0.0963 0.828 ncMono L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.06e-01 -0.101 0.0987 0.828 ncMono L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 9.13e-01 0.0115 0.105 0.828 ncMono L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 5.54e-02 0.229 0.119 0.828 ncMono L2
ENSG00000059758 CDK17 -134835 sc-eQTL 9.80e-01 0.00288 0.117 0.811 pDC L2
ENSG00000084110 HAL 269280 sc-eQTL 1.34e-02 0.242 0.0966 0.811 pDC L2
ENSG00000111142 METAP2 792125 sc-eQTL 7.96e-01 0.0344 0.133 0.811 pDC L2
ENSG00000111144 LTA4H 222125 sc-eQTL 7.39e-01 -0.0368 0.11 0.811 pDC L2
ENSG00000111145 ELK3 71270 sc-eQTL 8.59e-01 0.0241 0.135 0.811 pDC L2
ENSG00000139343 SNRPF 406717 sc-eQTL 3.56e-01 0.109 0.117 0.811 pDC L2
ENSG00000139350 NEDD1 -641578 sc-eQTL 2.59e-02 0.287 0.128 0.811 pDC L2
ENSG00000257715 AC007298.1 240322 sc-eQTL 3.71e-01 0.0996 0.111 0.811 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000059758 CDK17 -134835 sc-eQTL 8.13e-01 0.0193 0.0812 0.831 B_Memory LOneK1K
ENSG00000111142 METAP2 792125 sc-eQTL 7.18e-01 0.0408 0.113 0.831 B_Memory LOneK1K
ENSG00000111144 LTA4H 222125 sc-eQTL 3.05e-01 0.0864 0.0841 0.831 B_Memory LOneK1K
ENSG00000111145 ELK3 71270 sc-eQTL 2.78e-01 -0.105 0.0961 0.831 B_Memory LOneK1K
ENSG00000136014 USP44 714169 sc-eQTL 8.98e-01 -0.0154 0.12 0.831 B_Memory LOneK1K
ENSG00000139343 SNRPF 406717 sc-eQTL 7.20e-01 0.0335 0.0934 0.831 B_Memory LOneK1K
ENSG00000139350 NEDD1 -641578 sc-eQTL 1.12e-01 -0.195 0.122 0.831 B_Memory LOneK1K
ENSG00000059758 CDK17 -134835 sc-eQTL 2.47e-01 -0.0807 0.0696 0.831 B_Naive LOneK1K
ENSG00000111142 METAP2 792125 sc-eQTL 9.92e-01 0.000909 0.0945 0.831 B_Naive LOneK1K
ENSG00000111144 LTA4H 222125 sc-eQTL 2.48e-01 0.0905 0.0781 0.831 B_Naive LOneK1K
ENSG00000111145 ELK3 71270 sc-eQTL 3.10e-02 -0.192 0.0882 0.831 B_Naive LOneK1K
ENSG00000136014 USP44 714169 sc-eQTL 7.09e-01 0.0407 0.109 0.831 B_Naive LOneK1K
ENSG00000139343 SNRPF 406717 sc-eQTL 2.83e-01 0.0964 0.0896 0.831 B_Naive LOneK1K
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.13e-02 0.207 0.118 0.831 B_Naive LOneK1K
ENSG00000059758 CDK17 -134835 sc-eQTL 6.10e-04 -0.275 0.0791 0.831 CD14_Mono LOneK1K
ENSG00000084110 HAL 269280 sc-eQTL 2.31e-01 0.118 0.0982 0.831 CD14_Mono LOneK1K
ENSG00000111142 METAP2 792125 sc-eQTL 4.00e-01 0.0781 0.0927 0.831 CD14_Mono LOneK1K
ENSG00000111144 LTA4H 222125 sc-eQTL 3.85e-01 0.094 0.108 0.831 CD14_Mono LOneK1K
ENSG00000111145 ELK3 71270 sc-eQTL 5.87e-02 -0.147 0.0775 0.831 CD14_Mono LOneK1K
ENSG00000139343 SNRPF 406717 sc-eQTL 9.22e-01 0.00743 0.0754 0.831 CD14_Mono LOneK1K
ENSG00000139350 NEDD1 -641578 sc-eQTL 9.28e-01 -0.0107 0.118 0.831 CD14_Mono LOneK1K
ENSG00000257715 AC007298.1 240322 sc-eQTL 7.78e-02 0.193 0.109 0.831 CD14_Mono LOneK1K
ENSG00000059758 CDK17 -134835 sc-eQTL 6.50e-01 -0.0382 0.0839 0.834 CD16_Mono LOneK1K
ENSG00000084110 HAL 269280 sc-eQTL 2.68e-01 0.11 0.099 0.834 CD16_Mono LOneK1K
ENSG00000111142 METAP2 792125 sc-eQTL 1.81e-01 0.151 0.112 0.834 CD16_Mono LOneK1K
ENSG00000111144 LTA4H 222125 sc-eQTL 1.32e-01 0.166 0.109 0.834 CD16_Mono LOneK1K
ENSG00000111145 ELK3 71270 sc-eQTL 1.11e-01 -0.13 0.081 0.834 CD16_Mono LOneK1K
ENSG00000139343 SNRPF 406717 sc-eQTL 6.54e-01 -0.0377 0.084 0.834 CD16_Mono LOneK1K
ENSG00000139350 NEDD1 -641578 sc-eQTL 8.67e-01 -0.018 0.108 0.834 CD16_Mono LOneK1K
ENSG00000257715 AC007298.1 240322 sc-eQTL 1.42e-01 0.167 0.113 0.834 CD16_Mono LOneK1K
ENSG00000059758 CDK17 -134835 sc-eQTL 6.25e-02 -0.11 0.0587 0.832 NK_CD56dim LOneK1K
ENSG00000111142 METAP2 792125 sc-eQTL 7.56e-01 0.028 0.0901 0.832 NK_CD56dim LOneK1K
ENSG00000111144 LTA4H 222125 sc-eQTL 2.11e-02 -0.236 0.102 0.832 NK_CD56dim LOneK1K
ENSG00000111145 ELK3 71270 sc-eQTL 5.56e-01 -0.0556 0.0942 0.832 NK_CD56dim LOneK1K
ENSG00000139343 SNRPF 406717 sc-eQTL 9.56e-01 0.00448 0.0806 0.832 NK_CD56dim LOneK1K
ENSG00000139350 NEDD1 -641578 sc-eQTL 3.75e-01 -0.0891 0.1 0.832 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000111142 METAP2 792125 pQTL 0.00901 0.0445 0.017 0.0 0.0 0.154
ENSG00000111145 ELK3 71270 eQTL 0.00104 -0.0754 0.0229 0.0 0.0 0.157

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000139344 \N 322314 1.31e-06 4.63e-07 1.76e-07 4.34e-07 1.1e-07 3.36e-07 4.93e-07 7.12e-08 2.81e-07 1.89e-07 4.97e-07 2.04e-07 9.37e-07 1.1e-07 3.56e-07 1.33e-07 2.07e-07 3.56e-07 2.65e-07 1.76e-07 1.8e-07 3.76e-07 3.04e-07 1.17e-07 6.18e-07 2.01e-07 2.24e-07 1.85e-07 2.78e-07 3.39e-07 2.83e-07 6.92e-08 5.42e-08 1.24e-07 3.4e-07 6.18e-08 1.11e-07 5.25e-08 6.81e-08 2.62e-08 3.43e-08 4.95e-07 1.7e-08 1.14e-08 5.32e-08 1.25e-08 8.94e-08 3.25e-09 5.62e-08